Animal BiotechnologyPub Date : 2025-12-01Epub Date: 2025-03-17DOI: 10.1080/10495398.2025.2476531
Jia Liu, Chicheng Ma, Yu Cheng, Minzhi Wang, Guoqing Zhao, Liwei Huang, Ruigao Song, Xi Wang, Hongxia Li
{"title":"METTL14 and WTAP play a crucial role in the regulation of bovine preadipocyte differentiation.","authors":"Jia Liu, Chicheng Ma, Yu Cheng, Minzhi Wang, Guoqing Zhao, Liwei Huang, Ruigao Song, Xi Wang, Hongxia Li","doi":"10.1080/10495398.2025.2476531","DOIUrl":"10.1080/10495398.2025.2476531","url":null,"abstract":"<p><p>m6A methylation is the most common mRNA modification in mammals and plays a significant role in regulating various biological functions. Some studies have demonstrated that the methyltransferase <i>METTL3</i> can promote adipogenesis. However, the regulatory mechanisms of <i>METTL14</i> and <i>WTAP</i>, both methyltransferases, in adipogenesis remain unclear. This study investigated their effects on bovine preadipocyte differentiation using siRNA-mediated knockdown combined with transcriptomic analysis. Silencing <i>METTL14</i> and <i>WTAP</i> significantly impaired lipid droplet formation and revealed distinct regulatory pathways: <i>METTL14</i> knockdown affected genes like <i>JAK2</i> and <i>STAT3</i>, while <i>WTAP</i> suppression down-regulated <i>PPARγ/FABP4</i> signalling pathway components. These findings demonstrate that <i>WTAP</i> specifically modulates bovine adipocyte differentiation through the <i>PPARγ/FABP4</i> pathway.</p>","PeriodicalId":7836,"journal":{"name":"Animal Biotechnology","volume":"36 1","pages":"2476531"},"PeriodicalIF":1.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143646990","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Animal BiotechnologyPub Date : 2025-12-01Epub Date: 2025-02-17DOI: 10.1080/10495398.2025.2461176
Shuheng Chen, Liang Xu, Junchen Leng, Zitong Chen, Yu Chen, Li Li, Hongping Zhang, Mingzhou Li, Jiaxue Cao
{"title":"Identification of SNPs in the second intron of <i>IGF2BP1</i> and their Association with growth traits in Nanjiang Yellow goat.","authors":"Shuheng Chen, Liang Xu, Junchen Leng, Zitong Chen, Yu Chen, Li Li, Hongping Zhang, Mingzhou Li, Jiaxue Cao","doi":"10.1080/10495398.2025.2461176","DOIUrl":"10.1080/10495398.2025.2461176","url":null,"abstract":"<p><p>Insulin-like Growth Factor 2 mRNA-binding Protein 1 (<i>IGF2BP1</i>) is a candidate gene of significant interest for modulating economically important traits in livestock and poultry. The second intron of <i>IGF2BP1</i> has been implicated in growth-related traits, though its precise mechanistic role remains elusive. Initial resequencing analyses in our laboratory indicated strong selective pressures on the <i>IGF2BP1</i> genomic region, prompting the selection and identification of several single nucleotide polymorphisms (SNPs). Seven SNPs were mapped to the conserved region of the second intron, necessitating further investigation into their functional relevance and association with growth traits. In this study, 348 Nanjiang Yellow goats were analyzed, and the association analysis via the GLM program in SAS 9.4 identified five SNPs significantly correlated with growth traits. Notably, rs652062749(A > G) emerged as a critical locus influencing later-stage growth traits. Furthermore, strong linkage disequilibrium was observed among three SNPs, with the rs638185407 (T > A) variant markedly enhancing luciferase activity in H293T cells. Combination genotypes TTAACT, TTCCCC, and ATCACT were identified as superior for growth traits, offering theoretical insights for genetic co-breeding. This study underscores the potential utility of <i>IGF2BP1</i> as a functional genetic marker in Nanjiang Yellow goat breeding programs.</p>","PeriodicalId":7836,"journal":{"name":"Animal Biotechnology","volume":"36 1","pages":"2461176"},"PeriodicalIF":1.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143439530","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The stems and leaves of <i>Panax notoginseng</i> reduce the abundance of antibiotic resistance genes by regulating intestinal microbiota in Duzang pigs.","authors":"Wenjie Cheng, Lanlan Yi, Taojie Xu, Yuxiao Xie, Junhong Zhu, Xuancheng Guan, Qiuyan Li, Ying Huang, Yanguang Zhao, Sumei Zhao","doi":"10.1080/10495398.2025.2471785","DOIUrl":"10.1080/10495398.2025.2471785","url":null,"abstract":"<p><p>In order to study the distribution characteristics of intestinal microbiota and antibiotic resistance genes (ARGs) in Duzang pigs after adding stems and leaves of <i>Panax notoginseng</i> to the feed, the characteristics of intestinal microbiota were explored by metagenomic sequencing, and 14 ARGs and 2 integrase genes were detected by qPCR. The results showed that the addition of stems and leaves of <i>P. notoginseng</i> increased the relative abundance of Firmicutes, <i>Lactobacillus</i> and <i>Pediococcus</i> in the cecum of Duzang pigs. A total of 10 ARGs and 2 integrase genes were detected in the cecal contents of pigs. The addition of stems and leaves of <i>P. notoginseng</i> reduced the relative abundance of total ARGs, <i>ermB</i>, <i>tetO</i> and <i>tetW</i> in the cecum of Duzang pigs. The results of network analysis showed that multiple genera were potential hosts of ARGs. The addition of stems and leaves of <i>P. notoginseng</i> may reduce the relative abundance of ARGs by reducing the relative abundance of genera such as <i>Corynebacterium</i> and <i>Flavonifractor</i>, thereby reducing the risk of ARGs spread. This study provides a theoretical basis for the rational use of stems and leaves of <i>P. notoginseng</i> to control ARGs.</p>","PeriodicalId":7836,"journal":{"name":"Animal Biotechnology","volume":"36 1","pages":"2471785"},"PeriodicalIF":1.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143646993","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Animal BiotechnologyPub Date : 2025-12-01Epub Date: 2025-02-07DOI: 10.1080/10495398.2025.2459915
Bin Liu, Shichao Wang, Fanhua Meng, Bei Wu, Yanru Zhang, Junwei Cao
{"title":"Study on immortalization of Mongolian sheep fibroblast cells.","authors":"Bin Liu, Shichao Wang, Fanhua Meng, Bei Wu, Yanru Zhang, Junwei Cao","doi":"10.1080/10495398.2025.2459915","DOIUrl":"10.1080/10495398.2025.2459915","url":null,"abstract":"<p><p>This study aims to establish an immortalized fibroblast cell line from Mongolian sheep. Primary Mongolian sheep fibroblasts (SSF) were isolated using tissue explant and enzymatic digestion methods, followed by microscopic observation, growth curve plotting, and karyotype analysis. The results confirmed the successful isolation of SSF. Human (hTERT) and sheep (sTERT) telomerase reverse transcriptase vectors were separately introduced into SSF, with cells passaged up to 36 generations following G418 selection. Microscopic examination and qRT-PCR results demonstrated that TERT transfection did not alter the morphology of SSF and led to stable, high levels of TERT expression (<i>P</i> < 0.01). Cell counting and flow cytometry revealed that TERT-transfected cells had higher viability and lower apoptosis rates compared to SSF (<i>P</i> < 0.05). Karyotype and soft agar colony formation assays indicated that hTERT and sTERT-transfected cells maintained normal characteristics without malignant transformation. β-galactosidase staining indicated that TERT transfection significantly reduced cellular senescence (<i>P</i> < 0.001). Additionally, sTERT-transfected cells exhibited higher TERT expression, enhanced viability, proliferation, and anti-senescence effects compared to hTERT-transfected cells (<i>P</i> < 0.05). In summary, the introduction of hTERT and sTERT effectively extends the lifespan of SSF, with sTERT demonstrating a more pronounced effect. This study provides critical evidence for preserving Mongolian sheep genetic resources and developing immortalized cell lines.</p>","PeriodicalId":7836,"journal":{"name":"Animal Biotechnology","volume":"36 1","pages":"2459915"},"PeriodicalIF":1.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143363484","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Animal BiotechnologyPub Date : 2025-12-01Epub Date: 2025-01-24DOI: 10.1080/10495398.2025.2450364
Izaz Ali, Muhammad Ibrahim, Sohail Ahmad, Sher Hayat Khan, Ihtesham Ul Haq, Ibrahim A Alhidary, Rifat Ullah Khan, Naseer Khan Momand, Marco Ragni
{"title":"Genetic variation in zona pellucida-3 (ZP3) gene and its association with litter size variation in Kari sheep.","authors":"Izaz Ali, Muhammad Ibrahim, Sohail Ahmad, Sher Hayat Khan, Ihtesham Ul Haq, Ibrahim A Alhidary, Rifat Ullah Khan, Naseer Khan Momand, Marco Ragni","doi":"10.1080/10495398.2025.2450364","DOIUrl":"10.1080/10495398.2025.2450364","url":null,"abstract":"<p><p>Variation in litter size (LS) in sheep is linked to genetic factors, including the Zona pellucida-3 (ZP3) gene, which plays a role in ovine reproductive processes. This study examined the association between ZP3 gene variations and LS in Kari sheep. Two groups of 160 Kari ewes were analysed: one consistently producing singletons and another producing twins, with occasional triplets. Additionally, Madakhlasht sheep, which sometimes produce twins, and Balkhi sheep, which produce only singletons, were used as references. The entire ZP3 gene was amplified using PCR and sequenced at 30× with Next Generation Sequencing. Bioinformatics analysis identified 70 variants across the three breeds, located in upstream regions, introns, and exons. Notably, two point mutations and a six-nucleotide insertion were found upstream of the initiation codon in twin-producing Kari ewes, potentially affecting ZP3 expression and LS. Two missense mutations (I101L in exon 1 and R408H in exon 8) were heterozygous in twin-producing Kari ewes but homozygous in other groups, correlating with LS. Protein modelling suggested that the I101L mutation alters the binding site, potentially impacting protein function. These findings indicate that ZP3 gene variations influence reproductive efficiency and LS in sheep, with specific variants serving as potential markers for selective breeding to enhance LS.</p>","PeriodicalId":7836,"journal":{"name":"Animal Biotechnology","volume":"36 1","pages":"2450364"},"PeriodicalIF":1.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143031786","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Primordial follicle activation related genes screening and differential expressed analysis by transcriptome sequencing in buffalo ovary after PI3K and mTOR stimulators activated.","authors":"Jingyuan Liang, Peng Zhu, Qiao Lv, Yu Pan, Ziyan Gao, Qinghua Xing, Ruimen Zhang, Yanfei Deng, Sufang Yang","doi":"10.1080/10495398.2025.2510320","DOIUrl":"https://doi.org/10.1080/10495398.2025.2510320","url":null,"abstract":"<p><p>Buffaloes are mono-ovulating animals, with only about 5% of primordial follicles being fully capable of maturation into primary oocytes throughout their reproductive years. <i>In vitro</i> primordial follicle activation technology provides a new way to manipulate and utilize oocyte resources. However, <i>in vitro</i> activation of buffalo primordial follicles has not been reported. In this study, buffalo cortical strips were cultured <i>in vitro</i> and activated with PI3K and mTOR stimulators, and the proportion of activated and developed follicles was evaluated and compared between groups . Furthermore, the key genes involved in primordial follicle activation were screened using RNA sequencing. Results showed that buffalo ovarian cortex can be well preserved by being cultured <i>in vitro</i> for at least 7 days and maintain its tissue properties and follicular morphology. <i>In vitro</i>, treatment with PI3K and mTOR pathway stimulators significantly enhanced the activation efficiency of the primordial follicles. In addition, several differentially expressed genes related to follicular development, such as IDO1, CXCL10 and CXCL6 were significantly up-regulated after stimulation. Our findings demonstrate that PI3K and mTOR stimulators can significantly promote the activation and development of buffalo follicles, and providing technical support and a theoretical basis for the optimization of <i>in vitro</i> culture technology of buffalo preantral follicles .</p>","PeriodicalId":7836,"journal":{"name":"Animal Biotechnology","volume":"36 1","pages":"2510320"},"PeriodicalIF":1.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144172393","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Molecular markers associated with growth, meat, and carcass traits in sheep: a review.","authors":"Ainagul Begenova, Roman Bissengaliyev, Talgat Kulmagambetov, Kaster Nurgulsim, Aiganym Bekenova, Gulbadan Otepova, Zhanerke Akhatayeva","doi":"10.1080/10495398.2025.2526458","DOIUrl":"https://doi.org/10.1080/10495398.2025.2526458","url":null,"abstract":"<p><p>Sheep breeding has been a fundamental aspect of livestock farming for thousands of years, supplying humans with wool, meat, and milk. As the livestock sector adapts to contemporary needs, the increasing global demand for animal products, fueled by population growth, highlights the significance of effective breeding techniques. Growth and meat traits are a key factor in sheep breeding, directly impacting resource efficiency and breeder profitability. In this review, we have explored the advantages of molecular marker-assisted selection (MAS) and its specific applications in breeding meat sheep. We summarized research on quantitative trait loci (QTLs) and genome-wide association studies (GWAS), as well as variations in key genes, including myostatin (<i>MSTN</i>), insulin-like growth factor 1 (<i>IGF-1</i>), and calpastatin (<i>CAST</i>), associated with growth, meat quality, and carcass traits in sheep. The advancements in molecular breeding for meat sheep, along with improvements in sheep genetics, genomic selection, and genome editing, have enhanced our understanding of DNA markers and demonstrated the genetic diversity present in meat sheep, significantly enriching sheep breeding strategies. Improvements in sample size, phenotyping efficiency, and the integration of omics studies could enhance our understanding of gene interactions, enabling MAS technology to reach its full potential.</p>","PeriodicalId":7836,"journal":{"name":"Animal Biotechnology","volume":"36 1","pages":"2526458"},"PeriodicalIF":1.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144590291","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Animal BiotechnologyPub Date : 2025-12-01Epub Date: 2025-04-04DOI: 10.1080/10495398.2025.2487089
Xue Feng, Qi Feng, Sayed Haidar Abbas Raza, Fen Li, Yun Ma
{"title":"Identification of key factors causing ketosis in dairy cows with low feed intake.","authors":"Xue Feng, Qi Feng, Sayed Haidar Abbas Raza, Fen Li, Yun Ma","doi":"10.1080/10495398.2025.2487089","DOIUrl":"10.1080/10495398.2025.2487089","url":null,"abstract":"<p><p>Ketosis is a common metabolic disease in high-yield dairy cows. Key genes affecting ketosis need to be further explored by new methods. The gene expression profiling and clinical data of GSE92398, GSE104079, and GSE4304 were obtained from the gene expression omnibus (GEO) database. Core modules and genes associated with RFI (residual feed intake) and ADF (alternate day fasting) were identified by weighted gene co-expression network analysis (WGCNA). Subsequently, the key genes related to ketosis and RFI were determined by protein-protein interaction (PPI) networks, ROC curves, functional enrichment, and differential expression analysis, respectively. The results showed that the genes of ACACA, ELOVL6 and XPO7 could be used as regulators of ketosis induced by low feed intake in dairy cows. At the same time, three genes (HRFI, STAT3 and IFNAR1) were retained as additional RFI biomarkers that could be considered. We identified three key factors as candidate genes and biomarkers of ketosis and RFI, respectively. These factors may provide a theoretical basis for targeted therapy of ketosis in dairy cows.</p>","PeriodicalId":7836,"journal":{"name":"Animal Biotechnology","volume":"36 1","pages":"2487089"},"PeriodicalIF":1.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143778510","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Animal BiotechnologyPub Date : 2025-12-01Epub Date: 2025-04-30DOI: 10.1080/10495398.2025.2496641
Xinyang Ren, Yingxin Qu, Akang Shari, Guang Li
{"title":"Transcriptome-wide study of mRNAs modified by m<sup>6</sup>A RNA methylation in the testis development of dairy goats.","authors":"Xinyang Ren, Yingxin Qu, Akang Shari, Guang Li","doi":"10.1080/10495398.2025.2496641","DOIUrl":"https://doi.org/10.1080/10495398.2025.2496641","url":null,"abstract":"<p><p>N6-methyladenosine (m<sup>6</sup>A) is an important epigenetic modification in RNA, playing a crucial role in regulating the production and aging of animal testicular sperm. This study extracted mRNA from the testicular tissue of male goats before and after sexual maturity, generating a methylation map through preliminary experiments and methylation immunoprecipitation sequencing. The results showed that during the development of dairy goats, the expression levels of marker genes related to testicular development and methylation-related enzymes changed significantly. A total of 36,602 peaks and 11,223 genes were identified in the two groups, including 2989 differential peaks (427 upregulated and 2562 downregulated) and 1457 differentially expressed genes (833 upregulated and 624 downregulated). The abundance of m<sup>6</sup>A was positively correlated with gene expression levels. This study reports for the first time the mRNA profiles of m<sup>6</sup>A modifications across the entire transcriptome during testicular development in Guanzhong dairy goats, providing a new perspective for genetic improvement in goats.</p>","PeriodicalId":7836,"journal":{"name":"Animal Biotechnology","volume":"36 1","pages":"2496641"},"PeriodicalIF":1.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143954164","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Identifying sex-based disparities in porcine mitochondrial function.","authors":"Hao Liu, Wenshu Shi, Xing Zhang, Xinmiao He, Xingbo Zhao","doi":"10.1080/10495398.2025.2488068","DOIUrl":"https://doi.org/10.1080/10495398.2025.2488068","url":null,"abstract":"<p><p>In pigs, the effect of sex on production and reproductive traits has been largely reported, however, whether sex exerts its influence through regulating mitochondrial function is still unclear. In this study, we constructed 15 male cells and 15 female fibroblasts derived from 35-day and 50-day fetuses, newborn piglets and 1-year-old pigs to identify the sex effect on mitochondrial functions. Results indicated significant differences on cellular and molecular characteristics between male and female cells, including energy metabolic trait, mitochondrial DNA (mtDNA) replication and transcription, and mRNA expressions of mitochondrial biogenesis genes and mitoprotease genes. Referring to sex, males exhibited significantly higher oxygen consumption rate productions, levels of reactive oxygen species (ROS) and mtDNA copy numbers than those with females in muscle and ear fibroblasts. And the expressions of mtDNA, mitochondrial biogenesis genes (<i>POLG</i>, <i>PPARGC1A</i>, <i>TFAM</i> and <i>TWNK</i>) and <i>XPNPEP3</i> were higher in males than females in ear fibroblasts derived from 1-year-old adult pigs (EFA cells). While, the cell proliferation and expressions of genes related to ROS metabolism were not influenced by sex. The results highlight the effect of sex on mitochondrial function and gene expression, and provide important data for a comprehensive understanding of the mechanisms underlying sex regulation of energy metabolism-related traits in pigs.</p>","PeriodicalId":7836,"journal":{"name":"Animal Biotechnology","volume":"36 1","pages":"2488068"},"PeriodicalIF":1.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143973352","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}