Saheed A Ayodeji,Yaroslav Balytskyi,Destina Unaegbu,Allison Ingman,Christopher V Kelly,Sheryl Roberts
{"title":"High-Affinity Probes for Androgen Receptor Imaging: From Cells and In Silico Modeling to Whole-Body Fluorescent Applications.","authors":"Saheed A Ayodeji,Yaroslav Balytskyi,Destina Unaegbu,Allison Ingman,Christopher V Kelly,Sheryl Roberts","doi":"10.1021/acs.jmedchem.5c00836","DOIUrl":"https://doi.org/10.1021/acs.jmedchem.5c00836","url":null,"abstract":"Castrate-resistant prostate cancer (CRPC) is driven by androgen receptor (AR) signaling. Imaging tools to monitor AR signaling dynamics are a high-priority goal. Here, we introduce ARi-FL, a series of visible- and near-infrared fluorescent AR inhibitors. Based on an aryloxy cyclohexane scaffold, a neolinker enabled amine-based conjugation to fluorophores. ARi-FL showed potent AR inhibition (IC50 ∼ 13 nM) and allowed visualization of cytoplasmic AR, correlating with AR-expressing cells, which were blockable with excess unlabeled ligand. In vivo and ex vivo studies in human prostate cancer models confirmed ARi-FL localization in AR-positive tumors. In silico modeling across wild-type (WT) and clinically relevant AR mutants (F877L, T878A, H875Y, W742C, and F877L/T878A) revealed nanomolar binding affinities (Kd ∼ 1-2 nM), consistent with experimental results. ARi-FL probes demonstrated high selectivity, practical yields, and stability. Taken together, ARi-FL offers a chemical imaging platform for noninvasive AR tracking with applications for studying resistance mechanisms of AR and guiding treatment decisions.","PeriodicalId":46,"journal":{"name":"Journal of Medicinal Chemistry","volume":"25 1","pages":""},"PeriodicalIF":7.3,"publicationDate":"2025-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144701267","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Su Hyun Ji,Miso Kang,Hyomin Ahn,Soo Yeon Baek,In-Gyun Lee,Hanul Jeon,Hwan Won Chung,Dong Kyun Han,Seoyeong Yang,Hyebin Lee,Yeseul Kim,Ji Hun Wi,Jeehee Lee,Younghun Yoo,Sungbae Kang,Mihue Jang,Byungsun Jeon,Nam-Jung Kim,Chiman Song,Sanghee Lee,Seo-Jung Han
{"title":"Identification of 5,7-Dihydro-6H-pyrrolo[2,3-d]pyrimidin-6-one Derivatives as ENPP1 Inhibitors for STING Pathway-Mediated Immunotherapy.","authors":"Su Hyun Ji,Miso Kang,Hyomin Ahn,Soo Yeon Baek,In-Gyun Lee,Hanul Jeon,Hwan Won Chung,Dong Kyun Han,Seoyeong Yang,Hyebin Lee,Yeseul Kim,Ji Hun Wi,Jeehee Lee,Younghun Yoo,Sungbae Kang,Mihue Jang,Byungsun Jeon,Nam-Jung Kim,Chiman Song,Sanghee Lee,Seo-Jung Han","doi":"10.1021/acs.jmedchem.5c01021","DOIUrl":"https://doi.org/10.1021/acs.jmedchem.5c01021","url":null,"abstract":"A novel small-molecule ENPP1 inhibitor, compound 31 featuring a pyrrolopyrimidinone core, was identified. Compound 31 exhibited potent ENPP1 inhibition with an IC50 of 14.68 nM and effectively activated the STING pathway in cell lines. In addition, 31 promoted cytokine release, thereby enhancing innate immune response. Moreover, 31 demonstrated favorable ADMET properties. Compound 31 displayed significant antitumor efficacy in 4T1 and CT26 syngeneic mouse models without notable toxicity. These findings highlight the potential of 31 as a promising compound for cancer immunotherapy by enhancing STING-mediated immune activation and improving responses to immune checkpoint inhibitors.","PeriodicalId":46,"journal":{"name":"Journal of Medicinal Chemistry","volume":"115 1","pages":""},"PeriodicalIF":7.3,"publicationDate":"2025-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144701265","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Hans Kelgtermans,Maxim De Wachter,Stijn Heyndrickx,Sandy El Bkassiny,Tatiana Lacarriere,Chris Laruelle,Jörg Heiermann,Wendy van Bruggen,Katarzyna Drabik,Denis Bucher,Thomas Coudrat,Emilie Jigorel,Kenneth Goossens,Michael Drennan,Martine Vrints,Maarten Verbeeck,Bas Housmans,Damien Ronsse,David Moreno-Delgado,Vahid Nassiri,Mia Jans,Maarten Gees,Emanuelle Wakselman,Line Oste,Monica Borgonovi,Elena Borregán-Ochando,Vladyslav Sushko,Alain Monjardet,Camille Dusserre,Frederique Van Acker,Anouk Blaauw,Stephanie Lavazais,Catherine Jagerschmidt,Didier Merciris,Michael Török-Schafroth,Christian A Seemayer,Katja Conrath,Fabrice A Kolb,Pierre Raboisson,Reginald Brys,David Amantini,Romain Gosmini,Alexis Denis,Juan-Miguel Jimenez,Steve De Vos,Nicolas Desroy
{"title":"Structure-Activity Relationship Guided Scaffold Hopping Resulted in the Identification of GLPG4970, a Highly Potent Dual SIK2/SIK3 Inhibitor.","authors":"Hans Kelgtermans,Maxim De Wachter,Stijn Heyndrickx,Sandy El Bkassiny,Tatiana Lacarriere,Chris Laruelle,Jörg Heiermann,Wendy van Bruggen,Katarzyna Drabik,Denis Bucher,Thomas Coudrat,Emilie Jigorel,Kenneth Goossens,Michael Drennan,Martine Vrints,Maarten Verbeeck,Bas Housmans,Damien Ronsse,David Moreno-Delgado,Vahid Nassiri,Mia Jans,Maarten Gees,Emanuelle Wakselman,Line Oste,Monica Borgonovi,Elena Borregán-Ochando,Vladyslav Sushko,Alain Monjardet,Camille Dusserre,Frederique Van Acker,Anouk Blaauw,Stephanie Lavazais,Catherine Jagerschmidt,Didier Merciris,Michael Török-Schafroth,Christian A Seemayer,Katja Conrath,Fabrice A Kolb,Pierre Raboisson,Reginald Brys,David Amantini,Romain Gosmini,Alexis Denis,Juan-Miguel Jimenez,Steve De Vos,Nicolas Desroy","doi":"10.1021/acs.jmedchem.5c01401","DOIUrl":"https://doi.org/10.1021/acs.jmedchem.5c01401","url":null,"abstract":"Inhibition of salt-inducible kinases (SIKs) SIK1, SIK2, and SIK3 represents a new potential therapeutic approach for autoimmune and inflammatory disease treatment via modulation of pro-inflammatory and immunoregulatory pathways, particularly inhibition of SIK2 and SIK3. After discovering a new chemotype for SIK inhibition, further optimization of potency, selectivity, ADMET and PK properties resulted in a 1,6-naphtyridine containing molecule GLPG4876 (7). However, 7 was clastogenic when examined in vivo in rat micronucleus assays, preventing further development. Overlay of 7 with GLPG3970 (6) within the SIK3 protein structure inspired the design of pyridine derivatives, leading to the identification of GLPG4970 (8). Compound 8 was negative in genotoxicity screening assays and demonstrated potent SIK2/SIK3 inhibition, for which isoform selectivity was determined in a cellular context. Compound 8 displayed improved potency compared with previously reported SIK inhibitors in biochemical and phenotypic cellular assays, and showed dose-dependent activity in disease relevant mouse pharmacological models of colitis.","PeriodicalId":46,"journal":{"name":"Journal of Medicinal Chemistry","volume":"704 1","pages":""},"PeriodicalIF":7.3,"publicationDate":"2025-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144701266","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Joachim Bröker,Alex G Waterson,Timothy R Hodges,Jason R Abbott,Allison Arnold,Jark Böttcher,Nina Braun,Jianwen Cui,Julian E Fuchs,Thomas Gerstberger,Sebastian Gogg,Sabine Hanner,Lorenz Herdeis,Lucas W Howell,Andreas Mantoulidis,Moriz Mayer,Jason Phan,Francesca Rocchetti,Kyra Sankar,Dhruba Sarkar,Otmar Schaaf,John L Sensintaffar,Qi Sun,Tobias Wunberg,Stephen W Fesik
{"title":"Discovery of BI-2493, a Pan-KRAS Inhibitor Showing In Vivo Efficacy.","authors":"Joachim Bröker,Alex G Waterson,Timothy R Hodges,Jason R Abbott,Allison Arnold,Jark Böttcher,Nina Braun,Jianwen Cui,Julian E Fuchs,Thomas Gerstberger,Sebastian Gogg,Sabine Hanner,Lorenz Herdeis,Lucas W Howell,Andreas Mantoulidis,Moriz Mayer,Jason Phan,Francesca Rocchetti,Kyra Sankar,Dhruba Sarkar,Otmar Schaaf,John L Sensintaffar,Qi Sun,Tobias Wunberg,Stephen W Fesik","doi":"10.1021/acs.jmedchem.5c00576","DOIUrl":"https://doi.org/10.1021/acs.jmedchem.5c00576","url":null,"abstract":"KRAS is one of the most highly validated cancer targets. Here we describe the design and synthesis of two reversible pan-KRAS inhibitors, BI-2865 and BI-2493. From our KRASG12C inhibitor program, we identified BI-2865, a potent noncovalent KRAS inhibitor that showed cellular activity against a broad spectrum of KRAS alleles and selectivity against HRAS and NRAS. Spirocyclization led to the discovery of BI-2493, a highly rigid analogue exhibiting better potency, metabolic stability, and permeability. BI-2493 shows in vivo efficacy in various KRAS mutant and KRAS wild-type amplified xenograft models and represents a promising starting point for further optimization.","PeriodicalId":46,"journal":{"name":"Journal of Medicinal Chemistry","volume":"47 1","pages":""},"PeriodicalIF":7.3,"publicationDate":"2025-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144701144","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Zulma Santisteban Valencia, Jennifer Kingston, Filip Miljković, Hannah Rowbottom, Nadia Mann, Sophie Davies, Martin Ekblad, Silvio Di Castro, Karolina Kwapień, Erik Malmerberg, Stig D. Friis, Thomas Lundbäck*, Tomas Leek* and Johan Wernevik*,
{"title":"","authors":"Zulma Santisteban Valencia, Jennifer Kingston, Filip Miljković, Hannah Rowbottom, Nadia Mann, Sophie Davies, Martin Ekblad, Silvio Di Castro, Karolina Kwapień, Erik Malmerberg, Stig D. Friis, Thomas Lundbäck*, Tomas Leek* and Johan Wernevik*, ","doi":"","DOIUrl":"","url":null,"abstract":"","PeriodicalId":46,"journal":{"name":"Journal of Medicinal Chemistry","volume":"68 14","pages":"XXX-XXX XXX-XXX"},"PeriodicalIF":6.8,"publicationDate":"2025-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/pdf/10.1021/acs.jmedchem.5c01870","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144685402","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Rajamanikkam Kamaraj, Ivana Mejdrová, Maria Krutakova, Tomas Smutny, Kryštof Škach, Klara Dohnalova, Lucie Smutna, Dharani Sai Sreekanth Nellore, Jan Dusek, Karel Chalupsky, Jana Hricová, Thales Kronenberger, Aaron Stahl, Markus Templin, Albert Braeuning, Radim Nencka* and Petr Pavek*,
{"title":"","authors":"Rajamanikkam Kamaraj, Ivana Mejdrová, Maria Krutakova, Tomas Smutny, Kryštof Škach, Klara Dohnalova, Lucie Smutna, Dharani Sai Sreekanth Nellore, Jan Dusek, Karel Chalupsky, Jana Hricová, Thales Kronenberger, Aaron Stahl, Markus Templin, Albert Braeuning, Radim Nencka* and Petr Pavek*, ","doi":"","DOIUrl":"","url":null,"abstract":"","PeriodicalId":46,"journal":{"name":"Journal of Medicinal Chemistry","volume":"68 14","pages":"XXX-XXX XXX-XXX"},"PeriodicalIF":6.8,"publicationDate":"2025-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/pdf/10.1021/acs.jmedchem.4c03134","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144685410","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Overcoming E3 Ligase-Mediated Resistance: Development of Novel Hydrophobic Tagging-Based Degraders Targeting ALK Protein.","authors":"Shaowen Xie,Jingjie Zhu,Fangyi Zhan,Dazhi Feng,Chen He,Lihua Liu,Jia Xie,Jingyu Liu,Ming Zhong,Xingting Zhang,Jinyi Xu,Hong Yao,Shengtao Xu","doi":"10.1021/acs.jmedchem.5c00488","DOIUrl":"https://doi.org/10.1021/acs.jmedchem.5c00488","url":null,"abstract":"Traditional PROTACs, despite their groundbreaking role in targeted protein degradation (TPD), rely on E3 ubiquitin ligases and are vulnerable to resistance. In this study, we discovered norbornene- and bornane-based hydrophobic tags (HyTs) that efficiently degrade anaplastic lymphoma kinase (ALK). Notably, a novel hydrophobic tag, bornane was first identified. Both norbornene-based HyT J26 and bornane-based HyT J21 demonstrated significant degradation and antiproliferative activity in vitro. J26 achieves effective degradation of the EML4-ALK fusion protein in H3122 cells with CRBN expression knocked down via siRNA. In vivo, J26 significantly suppresses tumor growth with moderate oral bioavailability. Remarkably, J26 effectively targets ALK through the Hsp70 chaperone system and the ubiquitin-proteasome pathway, by passing the need for E3 ligase CRBN. This feature addresses a potential resistance mechanism arising from E3 ligase downregulation, thereby enhancing the potential of HyT technology in precision oncology.","PeriodicalId":46,"journal":{"name":"Journal of Medicinal Chemistry","volume":"17 1","pages":""},"PeriodicalIF":7.3,"publicationDate":"2025-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144693346","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Valentina Verdoliva,Giuseppe Digilio,Emanuela Iaccarino,Stefania De Luca
{"title":"Solvent-Free procedure of an A9 Peptide Dimer Exhibiting Specific HER2 Receptor Binding: Fluorescence Spectroscopy Evaluation of the Enhanced Binding Affinity.","authors":"Valentina Verdoliva,Giuseppe Digilio,Emanuela Iaccarino,Stefania De Luca","doi":"10.1021/acs.jmedchem.5c01194","DOIUrl":"https://doi.org/10.1021/acs.jmedchem.5c01194","url":null,"abstract":"HER2-expressing cancers currently benefit from targeted therapies, including monoclonal antibodies and antibody-drug conjugates that specifically bind to the extracellular domain of the receptor. Peptides targeting HER2 represent promising candidates for the development of alternative molecular drugs. In this study, we report a dimeric version of the previously validated A9 peptide as a ligand specifically targeting HER2. The novel A9-PEG-A9 conjugate consists of two A9 peptides whose N-terminal amino groups are linked via a polyethylene glycol chain. It was synthesized using a solvent-free protocol and validated as an improved ligand, demonstrating enhanced water solubility and increased affinity for the model receptor HER2-DIVMP, as determined by the fluorescence spectroscopy titration method.","PeriodicalId":46,"journal":{"name":"Journal of Medicinal Chemistry","volume":"113 1","pages":""},"PeriodicalIF":7.3,"publicationDate":"2025-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144693349","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Adam Ard,Carlos Cruz-Cortés,Xinmin Gan,Guadalupe Guerrero-Serna,Andrew D White,Martin C Clasby,L Michel Espinoza-Fonseca
{"title":"SAR-Guided Development of Small-Molecule SERCA2a Activators: Discovery of Potent Indoline, Benzofuran, and Benzodioxole Analogs for Cardiovascular Applications.","authors":"Adam Ard,Carlos Cruz-Cortés,Xinmin Gan,Guadalupe Guerrero-Serna,Andrew D White,Martin C Clasby,L Michel Espinoza-Fonseca","doi":"10.1021/acs.jmedchem.5c01192","DOIUrl":"https://doi.org/10.1021/acs.jmedchem.5c01192","url":null,"abstract":"Heart failure (HF) remains a major public health burden, with current therapies focused primarily on symptom management. Impaired activity of the cardiac Ca2+ pump SERCA2a is a hallmark of HF and a promising therapeutic target, but limited structural data have hindered small-molecule development. Here, we report a comprehensive structure-activity relationship (SAR) investigation of small-molecule SERCA2a activators, beginning with natural product hits and progressing through iterative optimization of three pharmacophoric regions. This effort produced the largest collection of SERCA2a modulators to date─including 20 activators, 8 dual effectors, and 6 inhibitors. Several indoline, benzofuran, and benzodioxole analogs emerged as potent activators, increasing ATPase activity by ∼57% (EC50 = 0.7-9 μM). Notably, SERCA2a activation was inversely correlated with Ca2+ affinity, suggesting that SERCA2a stimulation occurs at the expense of Ca2+ binding. In summary, these findings identify key structural features that drive SERCA2a activity and establish a framework for developing next-generation SERCA2a-targeted therapies.","PeriodicalId":46,"journal":{"name":"Journal of Medicinal Chemistry","volume":"17 1","pages":""},"PeriodicalIF":7.3,"publicationDate":"2025-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144693350","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}