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A practical guide for the assay-dependent characterisation of irreversible inhibitors† 不可逆抑制剂特性测定实用指南。
IF 3.597
MedChemComm Pub Date : 2024-11-01 DOI: 10.1039/D4MD00707G
Lavleen K. Mader, Jessica E. Borean and Jeffrey W. Keillor
{"title":"A practical guide for the assay-dependent characterisation of irreversible inhibitors†","authors":"Lavleen K. Mader, Jessica E. Borean and Jeffrey W. Keillor","doi":"10.1039/D4MD00707G","DOIUrl":"10.1039/D4MD00707G","url":null,"abstract":"<p >Irreversible targeted covalent inhibitors, in the past regarded as inappropriately reactive and toxic, have seen a recent resurgence in clinical interest. This paradigm shift is attributed to the exploitation of the two-step mechanism, in which a high affinity and selectivity (<em>i.e.</em>, low <em>K</em><small><sub>I</sub></small>) scaffold binds the target and only then does a pendant low intrinsic reactivity warhead react with the target (moderate <em>k</em><small><sub>inact</sub></small>). This highlights the importance of evaluating inhibitors by deriving both their <em>K</em><small><sub>I</sub></small> and <em>k</em><small><sub>inact</sub></small> values. The development of methods to evaluate these inhibitors by accounting for their time-dependent nature has been crucial to the discovery of promising clinical candidates. Herein, we report all the practical kinetic methods available to date to derive <em>k</em><small><sub>inact</sub></small> and <em>K</em><small><sub>I</sub></small> values. These methods include direct observation of covalent modification, continuous assay (Kitz &amp; Wilson) evaluation, and discontinuous incubation and pre-incubation time-dependent IC<small><sub>50</sub></small> assays. We also provide practical guidelines and examples for performing these assays, comparison of their utility, and perspectives for their extended applications. This review aims to provide clarity about the use of these methods for reporting complete inhibitor kinetic profiles, guiding irreversible drug development towards increased target affinity and selectivity, while modulating <em>in vivo</em> stability and on-target reactivity.</p>","PeriodicalId":88,"journal":{"name":"MedChemComm","volume":" 1","pages":" 63-76"},"PeriodicalIF":3.597,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142627395","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development, biological evaluation, and molecular modelling of some benzene-sulfonamide derivatives as protein tyrosine phosphatase-1B inhibitors for managing diabetes mellitus and associated metabolic disorders† 一些苯磺酰胺衍生物作为蛋白酪氨酸磷酸酶-1B 抑制剂用于控制糖尿病和相关代谢紊乱的开发、生物评估和分子建模。
IF 3.597
MedChemComm Pub Date : 2024-10-23 DOI: 10.1039/D4MD00594E
Nagat Ghareb, Khaled M. Darwish, Mohamed S. Nafie, Ranwa Elrayess, Noha M. Abourobe, Shaimaa A. Fattah, Reem M. Hazem, Eman T. Mehanna and Ranza Elrayess
{"title":"Development, biological evaluation, and molecular modelling of some benzene-sulfonamide derivatives as protein tyrosine phosphatase-1B inhibitors for managing diabetes mellitus and associated metabolic disorders†","authors":"Nagat Ghareb, Khaled M. Darwish, Mohamed S. Nafie, Ranwa Elrayess, Noha M. Abourobe, Shaimaa A. Fattah, Reem M. Hazem, Eman T. Mehanna and Ranza Elrayess","doi":"10.1039/D4MD00594E","DOIUrl":"10.1039/D4MD00594E","url":null,"abstract":"<p >Exploring new inhibitors with good bioavailability and high selectivity for managing type 2 diabetes mellitus (T2DM) and its associated complications is a major challenge for research, academia, and the pharmaceutical industry. Protein tyrosine phosphatase-1B (PTP1B) arose as an important negative regulator in insulin signaling pathways associated with metabolic disorders, including T2DM and obesity. Novel neutral compounds with a benzene-sulfonamide scaffold were designed and synthesized based on structural- and ligand-based drug design strategies for fragment growth. Promising hits against PTP1B were identified through <em>in vitro</em> enzymology inhibition assay. Mechanistic aspects of the compound's different inhibition activities were rigorously investigated through molecular docking coupled with explicit dynamics simulations. Four identified hits, <strong>3c</strong>, <strong>8</strong>, <strong>10a</strong>, and <strong>11</strong>, with sub-micromolar PTP-1B IC<small><sub>50</sub></small> and significant predicted pharmacokinetic and pharmacodynamic parameters, were further biologically evaluated for their anti-diabetic, anti-obesity, anti-inflammatory, and anti-oxidant effects in a high-fat diet (HFD) + streptozotocin (STZ)-induced T2DM rat model. All these hit compounds exhibited a significant anti-diabetic and anti-obesity effect and a significant efficacy in reducing oxidative stress and increasing anti-oxidant enzymes while reducing inflammatory markers. Improving compound potency was further highlighted by improving the pharmacokinetic profile of the most active compound, <strong>10a</strong>, through nano formulation. Compound <strong>10a</strong> nano formulation showed the most promising anti-diabetic and anti-obesity effects and a remarkable histopathological improvement in all organs studied.</p>","PeriodicalId":88,"journal":{"name":"MedChemComm","volume":" 1","pages":" 247-273"},"PeriodicalIF":3.597,"publicationDate":"2024-10-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142516596","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Design, synthesis, and biological evaluation of pyrazole–ciprofloxacin hybrids as antibacterial and antibiofilm agents against Staphylococcus aureus† 设计、合成吡唑-环丙沙星混合物并对其进行生物学评价,以作为抗金黄色葡萄球菌的抗菌剂和抗生物膜剂。
IF 3.597
MedChemComm Pub Date : 2024-10-22 DOI: 10.1039/D4MD00623B
Ojaswitha Ommi, Priyanka Sudhir Dhopat, Shashikanta Sau, Madhu Rekha Estharla, Srinivas Nanduri, Nitin Pal Kalia and Venkata Madhavi Yaddanapudi
{"title":"Design, synthesis, and biological evaluation of pyrazole–ciprofloxacin hybrids as antibacterial and antibiofilm agents against Staphylococcus aureus†","authors":"Ojaswitha Ommi, Priyanka Sudhir Dhopat, Shashikanta Sau, Madhu Rekha Estharla, Srinivas Nanduri, Nitin Pal Kalia and Venkata Madhavi Yaddanapudi","doi":"10.1039/D4MD00623B","DOIUrl":"10.1039/D4MD00623B","url":null,"abstract":"<p >In our continued efforts to tackle antibiotic resistance, a new series of pyrazole–ciprofloxacin hybrids were designed, synthesized, and evaluated for their antibacterial activity against <em>Staphylococcus aureus</em> (<em>S. aureus</em>), <em>Pseudomonas aeruginosa</em> (<em>P. aeruginosa</em>), and <em>Mycobacterium tuberculosis</em> (<em>Mtb</em>). Most of the compounds exhibited good to excellent activities against <em>S. aureus</em>, and six compounds (<strong>7a</strong>, <strong>7b</strong>, <strong>7d</strong>, <strong>7g</strong>, <strong>7k</strong>, and <strong>7p</strong>) exhibited higher or comparable activity (MIC = 0.125–0.5 μg mL<small><sup>−1</sup></small>) to ciprofloxacin (0.125 μg mL<small><sup>−1</sup></small>). Further, these selected compounds were non-toxic (CC<small><sub>50</sub></small> ≥ 1000 μg mL<small><sup>−1</sup></small>) when evaluated for cell viability test against the Hep-G2 cell line. Three compounds (<strong>7a</strong>, <strong>7d</strong>, and <strong>7g</strong>) demonstrated excellent activity against ciprofloxacin-resistant <em>S. aureus</em> with MIC values ranging from 0.125–0.5 μg mL<small><sup>−1</sup></small> and good antibiofilm activity. Among them, <strong>7g</strong> displayed remarkable antibiofilm activity with an MBIC<small><sub>50</sub></small> value of 0.02 μg mL<small><sup>−1</sup></small>, which is 50 times lower than ciprofloxacin (MBIC<small><sub>50</sub></small> = 1.06 μg mL<small><sup>−1</sup></small>). A time-kill kinetics study indicated that <strong>7g</strong> showed both concentration and time-dependent bactericidal properties. In addition, <strong>7g</strong> effectively inhibited DNA-gyrase supercoiling activity at 1 μg mL<small><sup>−1</sup></small> (8× MIC). Two compounds <strong>7b</strong> and <strong>7d</strong> exhibited the highest activity against <em>Mtb</em> with a MIC of 0.5 μg mL<small><sup>−1</sup></small>, while <strong>7c</strong> showed the highest activity against <em>P. aeruginosa</em> with a MIC value of 2 μg mL<small><sup>−1</sup></small>. Molecular docking studies revealed that <strong>7g</strong> formed stable interactions at the DNA active site.</p>","PeriodicalId":88,"journal":{"name":"MedChemComm","volume":" 1","pages":" 420-428"},"PeriodicalIF":3.597,"publicationDate":"2024-10-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142568508","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Introduction to the themed collection in honour of Professor Christian Leumann 克里斯蒂安-莱曼教授主题文集导言。
IF 3.597
MedChemComm Pub Date : 2024-10-22 DOI: 10.1039/D4MD90039A
Marcel Hollenstein and Eugen Stulz
{"title":"Introduction to the themed collection in honour of Professor Christian Leumann","authors":"Marcel Hollenstein and Eugen Stulz","doi":"10.1039/D4MD90039A","DOIUrl":"10.1039/D4MD90039A","url":null,"abstract":"<p >A graphical abstract is available for this content</p>","PeriodicalId":88,"journal":{"name":"MedChemComm","volume":" 11","pages":" 3636-3638"},"PeriodicalIF":3.597,"publicationDate":"2024-10-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142507036","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metal-free synthesis of N-fused quinazolino-quinazoline-diones as a MALAT1 RNA triple helix intercalator† 作为 MALAT1 RNA 三重螺旋插入因子的 N-融合喹唑啉二酮的无金属合成。
IF 3.597
MedChemComm Pub Date : 2024-10-22 DOI: 10.1039/D4MD00614C
Vijay Babu Pathi, Pranotosh Das, Abhyuday Guin, Manish Debnath and Biswadip Banerji
{"title":"Metal-free synthesis of N-fused quinazolino-quinazoline-diones as a MALAT1 RNA triple helix intercalator†","authors":"Vijay Babu Pathi, Pranotosh Das, Abhyuday Guin, Manish Debnath and Biswadip Banerji","doi":"10.1039/D4MD00614C","DOIUrl":"10.1039/D4MD00614C","url":null,"abstract":"<p >The development of chemical scaffolds that target highly conserved <em>MALAT1</em> RNA received attention due to its significance in splicing, nuclear organization, and gene expression in disease progression pathways. Here, we synthesized a series of N-fused quinazolino-quinazoline-diones <em>via</em> a PIDA-induced C–N coupling methodology to target <em>MALAT1</em>. Interestingly, compound <strong>2z</strong> binds to the UUG pocket of a <em>MALAT1</em> RNA triple-helix through intercalation, evidenced from molecular docking studies, fluorescence-based assay and CD experiments. <strong>2z</strong> exhibited cytotoxicity towards <em>MALAT1</em> overexpressing cancer cells (SKOV-3, IC<small><sub>50</sub></small> of 8.0 ± 0.4 μM). These findings demonstrated <strong>2z</strong> as a <em>MALAT1</em> RNA triple-helix intercalator with therapeutic potential, offering an important chemical scaffold to understand <em>MALAT1</em> activity in disease development pathways.</p>","PeriodicalId":88,"journal":{"name":"MedChemComm","volume":" 1","pages":" 429-434"},"PeriodicalIF":3.597,"publicationDate":"2024-10-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142590945","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A novel approach for the synthesis of the cyclic lipopeptide globomycin† 合成环脂肽球霉素的新方法。
IF 3.597
MedChemComm Pub Date : 2024-10-21 DOI: 10.1039/D4MD00685B
Samantha J. Bann and Stephen A. Cochrane
{"title":"A novel approach for the synthesis of the cyclic lipopeptide globomycin†","authors":"Samantha J. Bann and Stephen A. Cochrane","doi":"10.1039/D4MD00685B","DOIUrl":"10.1039/D4MD00685B","url":null,"abstract":"<p >Cyclic lipopeptides (CLiPs) are a highly diverse class of secondary metabolites produced by bacteria and fungi. Examples of CLiPs have been found that possess potent antimicrobial activity against multidrug-resistant Gram-negative bacteria. Globomycin is a 19-membered CLiP that kills both Gram-positive and Gram-negative bacteria through inhibition of lipoprotein signal peptidase II (Lsp). It can only be obtained in small quantities from its <em>Streptomyces</em> producer strain, so there has been much interest in development of synthetic methods to access globomycin and analogues. Globomycin contains an N-terminal anti-α-methyl-β-hydroxy nonanoyl lipid tail, whose hydroxyl group forms an ester with the C-terminal carboxylate. Constructing the anti-arrangement between the α-methyl and β-hydroxy is synthetically challenging and previous globomycin syntheses are not compatible with diversification of the lipid tail after the stereocenters have been installed. Herein, we describe a new approach for the synthesis of globomycin that allows for facile lipid diversification. Using an anti-Evans Aldol condensation, a common intermediate is obtained that allows different “lipid swapping” through Grubbs-catalyzed cross-metathesis. Upon auxiliary cleavage, the resulting lipid can then be utilized in solid-phase peptide synthesis. Given the plethora of lipopeptides that contain β-hydroxy lipids, this method offers a convenient approach for convergent generation of lipopeptide analogues.</p>","PeriodicalId":88,"journal":{"name":"MedChemComm","volume":" 1","pages":" 373-378"},"PeriodicalIF":3.597,"publicationDate":"2024-10-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11528322/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142568166","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Miniaturized click chemistry and direct screening facilitate the discovery of triazole piperazine SARS-CoV-2 Mpro inhibitors with improved metabolic stability† 微型化点击化学和直接筛选有助于发现代谢稳定性更好的三唑哌嗪类 SARS-CoV-2 Mpro 抑制剂。
IF 3.597
MedChemComm Pub Date : 2024-10-18 DOI: 10.1039/D4MD00555D
Shenghua Gao, Letian Song, Bing Ye, Mianling Yang, Junyi Li, Manyu Gu, Ann E. Tollefson, Karoly Toth, Peng Zhan and Xinyong Liu
{"title":"Miniaturized click chemistry and direct screening facilitate the discovery of triazole piperazine SARS-CoV-2 Mpro inhibitors with improved metabolic stability†","authors":"Shenghua Gao, Letian Song, Bing Ye, Mianling Yang, Junyi Li, Manyu Gu, Ann E. Tollefson, Karoly Toth, Peng Zhan and Xinyong Liu","doi":"10.1039/D4MD00555D","DOIUrl":"10.1039/D4MD00555D","url":null,"abstract":"<p >The continuous mutational nature of SARS-CoV-2 and its inter-species' similarities emphasize the urgent need to design and develop more direct-acting antiviral agents against highly infectious variants. Herein, we report on the efficient discovery of potent non-covalent non-peptide-derived M<small><sup>pro</sup></small> inhibitors using miniaturized click chemistry and direct screening. Based on the privileged piperazine scaffold, 68 triazole-containing derivatives were assembled and screened. Notably, representative compound <strong>C1N46</strong> (IC<small><sub>50</sub></small> = 1.87 μM, EC<small><sub>50</sub></small> = 6.99 μM, CC<small><sub>50</sub></small> &gt; 100 μM) displayed potent inhibition activity against M<small><sup>pro</sup></small> and showed promising anti-SARS-CoV-2 properties <em>in vitro</em>. Additionally, <strong>C1N46</strong> exhibited improved liver microsome stability compared to lead compound <strong>GC-14</strong>. Docking studies predicted a multi-site binding mode of the triazole-based compounds. In conclusion, our studies validate the efficacy and feasibility of click chemistry in rapidly discovering antiviral agents.</p>","PeriodicalId":88,"journal":{"name":"MedChemComm","volume":" 1","pages":" 400-411"},"PeriodicalIF":3.597,"publicationDate":"2024-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142568512","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis and biological evaluation of novel D-ring fused steroidal N(2)-substituted-1,2,3-triazoles† 新型 D 环融合甾体 N(2)-取代-1,2,3-三唑的合成与生物学评价。
IF 3.597
MedChemComm Pub Date : 2024-10-18 DOI: 10.1039/D4MD00297K
Branislava Tenjović, Sofija Bekić, Andjelka Ćelić, Edward Petri, Julia Scholda, Florian Kopp, Marija Sakač and Andrea Nikolić
{"title":"Synthesis and biological evaluation of novel D-ring fused steroidal N(2)-substituted-1,2,3-triazoles†","authors":"Branislava Tenjović, Sofija Bekić, Andjelka Ćelić, Edward Petri, Julia Scholda, Florian Kopp, Marija Sakač and Andrea Nikolić","doi":"10.1039/D4MD00297K","DOIUrl":"10.1039/D4MD00297K","url":null,"abstract":"<p >In this study, a series of 13 new D-ring fused steroidal <em>N</em>(2)-substituted-1,2,3-triazoles were synthesized, characterized and evaluated for their biological activities. The relative binding affinities of the synthesized compounds for the ligand-binding domains of estrogen receptors α and β, androgen receptor and glucocorticoid receptor demonstrated that androstane derivatives <strong>3a</strong> and <strong>3h</strong> and estratriene derivative <strong>4e</strong> showed highly specific and strong binding affinity for estrogen receptor β, while <strong>3b</strong>, <strong>3e</strong>, <strong>4a</strong> and <strong>4b</strong> displayed high binding affinity for the glucocorticoid receptor. The synthesized compounds were tested for their ability to inhibit aldo–keto reductases 1C3 and 1C4 <em>in vitro</em> by monitoring NADPH consumption using fluorescence spectroscopy. The most potent aldo–keto reductase 1C3 inhibitors were compounds <strong>3h</strong> (71.17%) and <strong>3f</strong> (69.9%). Moreover, a molecular docking study was carried out for compounds <strong>3f</strong> and <strong>3h</strong> against aldo–keto reductase 1C3 and results showed that compounds <strong>3h</strong> and <strong>3f</strong> could bind in the same site and orientation as EM1404. However, polar atoms in the triazole group enable additional hydrogen bonding deeper in SP1 with Tyr319, Tyr216 and the NADP<small><sup>+</sup></small> cofactor, which are not visible in the AKR1C3-EM1404 crystal structure. The synthesized compounds were screened for their anticancer activity against four cancer cell lines. Compound <strong>3f</strong> demonstrated moderate toxic effects across various cancer types, while displaying lower toxicity towards the healthy cell line. In summary, our findings indicate that <em>N</em>(2)-substituted-1,2,3-triazoles are high-affinity ligands for estrogen receptor β and glucocorticoid receptor, inhibitors of aldo–keto reductase 1C3 enzyme, and exhibit antiproliferative effects against cancer cells, suggesting that they could serve as scaffolds for anticancer drug development.</p>","PeriodicalId":88,"journal":{"name":"MedChemComm","volume":" 1","pages":" 232-246"},"PeriodicalIF":3.597,"publicationDate":"2024-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142473778","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
S-MGBs bearing amidine tail groups are potent, selective antiplasmodial agents† 带有脒尾基的 S-MGBs 是强效的选择性抗疟药物。
IF 3.597
MedChemComm Pub Date : 2024-10-16 DOI: 10.1039/D4MD00619D
Marina Perieteanu, Tayner Rodriguez Garzon, Leah M. C. McGee, Abedawn I. Khalaf, Colin J. Suckling, Rebecca Beveridge, Vicky M. Avery and Fraser J. Scott
{"title":"S-MGBs bearing amidine tail groups are potent, selective antiplasmodial agents†","authors":"Marina Perieteanu, Tayner Rodriguez Garzon, Leah M. C. McGee, Abedawn I. Khalaf, Colin J. Suckling, Rebecca Beveridge, Vicky M. Avery and Fraser J. Scott","doi":"10.1039/D4MD00619D","DOIUrl":"10.1039/D4MD00619D","url":null,"abstract":"<p >There were an estimated 249 million cases of malaria globally in 2022, causing approximately 608 000 deaths. Most of these are attributed to infection by <em>P. falciparum</em>. Strathclyde minor groove binders (S-MGBs) are a promising new class of anti-infective agent that have been shown to be effective against many infectious organisms, including <em>P. falciparum</em>. A panel of 25 S-MGBs was synthesised, including those bearing an amidine tail group, and their antiplasmodial activity against 3D7 and Dd2 strains was determined <em>in vitro</em> using an asexual <em>P. falciparum</em> imaging assay. Determination of activity against HEK293 cells allowed for selective cytotoxicity to be measured. DNA binding studies were carried out using native mass spectrometry and DNA thermal shift assays. A comparison of 3D7 (chloroquine sensitive) and Dd2 (chloroquine resistant) potency showed no evidence of cross-resistance across the S-MGB set. <strong>S-MGB-356</strong>, <strong>S-MGB-368</strong> and <strong>S-MGB-359</strong>, amidine tail containing S-MGBs, were identified as the most promising hit compounds based on their selectivity indices (HEK293/3D7) of &gt;612.6, &gt;335.8 and &gt;264.8, respectively. <strong>S-MGB-356</strong>, <strong>S-MGB-368</strong> and <strong>S-MGB-359</strong> were confirmed to bind to DNA as dimers, with gDNA thermal shifts (Δ<em>T</em><small><sub>m</sub></small>) of 12 °C, 3 °C and 16 °C, respectively. Together, these data demonstrate that amidine tail bearing S-MGBs are promising hit compounds against <em>P. falciparum</em>, and can be further optimised into lead compounds.</p>","PeriodicalId":88,"journal":{"name":"MedChemComm","volume":" 1","pages":" 412-419"},"PeriodicalIF":3.597,"publicationDate":"2024-10-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11528320/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142568566","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rapid identification of novel indolylarylsulfone derivatives as potent HIV-1 NNRTIs via miniaturized CuAAC click-chemistry-based combinatorial libraries 通过基于 CuAAC 点击化学的小型化组合文库,快速鉴定新型吲哚芳砜衍生物作为强效 HIV-1 NNRTIs。
IF 3.597
MedChemComm Pub Date : 2024-10-15 DOI: 10.1039/D4MD00469H
Ping Gao, Shu Song, Christophe Pannecouque, Erik De Clercq, Peng Zhan and Xinyong Liu
{"title":"Rapid identification of novel indolylarylsulfone derivatives as potent HIV-1 NNRTIs via miniaturized CuAAC click-chemistry-based combinatorial libraries","authors":"Ping Gao, Shu Song, Christophe Pannecouque, Erik De Clercq, Peng Zhan and Xinyong Liu","doi":"10.1039/D4MD00469H","DOIUrl":"10.1039/D4MD00469H","url":null,"abstract":"<p >This article presents the rapid identification of novel indolylarylsulfone (IAS) derivatives as potent non-nucleoside reverse transcriptase inhibitors (NNRTIs) for HIV-1 through a miniaturized click-chemistry-based combinatorial library approach. Utilizing copper(<small>I</small>)-catalyzed azide–alkyne cycloaddition (CuAAC), a reliable and biocompatible click chemistry technique, the researchers synthesized and characterized a series of IAS derivatives. Several compounds selected through the <em>in situ</em> enzyme inhibition assay demonstrated promising activity in subsequent cellular level tests. Notably, compound <strong>C1N4</strong> displayed the most potent anti-HIV-1 IIIB activity with an EC<small><sub>50</sub></small> of 0.024 μM and low cytotoxicity (CC<small><sub>50</sub></small> &gt; 215.88 μM). Molecular docking studies provided insights into the binding mode of these novel compounds within the NNIBP, aiding in the structure-based design of future NNRTIs. The findings underscore the potential of click chemistry in the discovery of new anti-HIV agents with improved efficacy and safety profiles.</p>","PeriodicalId":88,"journal":{"name":"MedChemComm","volume":" 1","pages":" 157-167"},"PeriodicalIF":3.597,"publicationDate":"2024-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142473777","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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