Physiology and Molecular Biology of Plants最新文献

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Transgene-free genome editing in potato, a clonally propagated crop - strategies and future prospects. 无性系繁殖作物马铃薯的无转基因基因组编辑策略及未来展望。
IF 3.6 3区 生物学
Physiology and Molecular Biology of Plants Pub Date : 2026-08-01 Epub Date: 2026-06-29 DOI: 10.1007/s12298-026-01787-3
Neha Sharma, Kanika Thakur, Rasna Zinta, Ishani Shaunak, Sudha Batta, Ankush Saini, Rutika Sehgal, Suhani Bhagta, Brajesh Singh, Ajay Kumar Thakur
{"title":"Transgene-free genome editing in potato, a clonally propagated crop - strategies and future prospects.","authors":"Neha Sharma, Kanika Thakur, Rasna Zinta, Ishani Shaunak, Sudha Batta, Ankush Saini, Rutika Sehgal, Suhani Bhagta, Brajesh Singh, Ajay Kumar Thakur","doi":"10.1007/s12298-026-01787-3","DOIUrl":"10.1007/s12298-026-01787-3","url":null,"abstract":"<p><p>Clustered regularly interspaced short palindromic repeats (CRISPR)-associated protein (Cas)-based genome editing technology has come out as very precise and effective tool for targeted modification in the gene of interest and offers unprecedented potentials in crop improvement. However, in the present regulatory framework for commercialization of genome edited crops, in many countries including India, the edited lines must be transgene-free. In India, only site directed nuclease (SDN) I and SDN II category of genome edited events which are transgene-free are permitted for commercialization. Potato is a vegetatively propagated crop, having autotetraploid genome and is highly heterozygous in nature. Removal of the transgene from potato genome of edited lines through genetic segregation, either by crossing or selfing, is not the appropriate method as the elite background of the genome gets disturbed due to heterozygous nature of the crop. Every individual seed of potato, i.e. true potato seed (TPS) behaves like a different individual than the parental line and is unable to maintain the genetic identity. In this review article, we have discussed several strategies that can be enacted for generation of transgene-free genome edited lines in potato. This article will provide deeper insight and enhance understandings about the optimum use of CRISPR as non-GMO technology in the genetic enhancement of potato and to adopt the best strategies in editing this important tuberous, clonally propagated crop.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":"32 8","pages":"1747-1757"},"PeriodicalIF":3.6,"publicationDate":"2026-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13437819/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148679446","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cuticular dynamics in fruits: insights into evolution, stress responses, and strategies for crop quality improvement. 果实角质层动力学:对进化、胁迫反应和作物品质改良策略的见解。
IF 3.6 3区 生物学
Physiology and Molecular Biology of Plants Pub Date : 2026-08-01 Epub Date: 2026-06-28 DOI: 10.1007/s12298-026-01784-6
José Alberto Valenzuela-Avilés, Damaristelma de Jesús-Campos, Héctor Adán Ruiz-Ortega, Martín Ernesto Tiznado-Hernández, Miguel Ángel Hernández-Oñate
{"title":"Cuticular dynamics in fruits: insights into evolution, stress responses, and strategies for crop quality improvement.","authors":"José Alberto Valenzuela-Avilés, Damaristelma de Jesús-Campos, Héctor Adán Ruiz-Ortega, Martín Ernesto Tiznado-Hernández, Miguel Ángel Hernández-Oñate","doi":"10.1007/s12298-026-01784-6","DOIUrl":"10.1007/s12298-026-01784-6","url":null,"abstract":"<p><p>The plant cuticle is a lipid barrier that plays essential roles in reducing water loss, protecting against pathogens, and interacting with the environment. While it has been thoroughly studied in leaves, its dynamics in fruits have not been adequately explored. This research gap is significant, as the cuticle in fruits has considerable implications for crop quality, postharvest longevity, and stress resilience. This review summarizes current understanding of cuticular dynamics during the development of fleshy fruits, with a focus on evolutionary innovations that have influenced cuticle diversity in angiosperms. We explore the conserved yet highly regulated biosynthetic pathways, emphasizing compositional variations in cutin and cuticular wax specific to different species and developmental stages. The review outlines how transcriptional, hormonal, and epigenetic networks regulate cuticle formation in response to both biotic/abiotic stress, and how these changes influence fruit quality traits such as glossiness, firmness, and susceptibility to cracking. We discuss the potential of targeting cuticular genes-through breeding, transgenic methods, or CRISPR-Cas9 editing-to improve stress tolerance and fruit quality. This work highlights the importance of the cuticle in improving agricultural sustainability, especially in response to climate change, by integrating fundamental insights from model plants with applied research in fruit crops. We propose that fruit-focused research should leverage cuticle biology to develop resilient, high-quality varieties. This approach aims to reduce postharvest losses and enhance food security.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s12298-026-01784-6.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":"32 8","pages":"1671-1685"},"PeriodicalIF":3.6,"publicationDate":"2026-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13438044/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148679686","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Sustainable plant-based management strategies for mitigating drought in vegetable crops: A review. 蔬菜作物抗旱可持续植物管理策略综述
IF 3.6 3区 生物学
Physiology and Molecular Biology of Plants Pub Date : 2026-08-01 Epub Date: 2026-06-20 DOI: 10.1007/s12298-026-01782-8
T A Sandeep, Haripriya Shanmugam, Shobana Narayanasamy, Djanaguiraman Maduraimuthu
{"title":"Sustainable plant-based management strategies for mitigating drought in vegetable crops: A review.","authors":"T A Sandeep, Haripriya Shanmugam, Shobana Narayanasamy, Djanaguiraman Maduraimuthu","doi":"10.1007/s12298-026-01782-8","DOIUrl":"10.1007/s12298-026-01782-8","url":null,"abstract":"<p><p>Drought stress on vegetable crops significantly affect their plant growth and development resulting in reduced crop productivity and nutritional quality. Shallow root systems of the vegetable crops make them highly sensitive to drought stress. Therefore, sustainable drought mitigation strategies are required to alleviate drought stress for vegetable production under changing global environmental conditions. The current review focuses on key molecular mechanisms, including transcriptional factors and expression of stress-responsive genes, production of mitochondrial reactive oxygen species, modulation of signaling molecules, and circadian rhythm-mediated defense responses during onset of drought stress in vegetable crops. Further, plant-based mitigation strategies, such as use of phytomolecules, phytohormones, plant extracts, microbial endophytes, and drought-tolerant rootstocks from crop wild species for grafting onto vegetable crops are discussed for their role in enhancing drought resilience. Also, combining these strategies strengthens the antioxidant defense mechanism, osmotic homeostasis, and hormonal crosstalk under drought stress. Among the various strategies reported, phytomolecules, microbial endophytes, and drought-tolerant rootstocks from crop wild relatives are found to be promising for long-term field adaptations. The review further emphasizes future insights into plant-based solutions to enhance drought stress tolerance and integration of system biology approaches as well as field-based studies to develop climate-resilient, sustainable vegetable crop production system.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":"32 8","pages":"1727-1745"},"PeriodicalIF":3.6,"publicationDate":"2026-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13438050/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148679362","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comprehensive analysis of AsCKX and AsIPT gene families in oat: characterization and differential regulation under alkaline and osmotic stresses. 燕麦AsCKX和AsIPT基因家族的综合分析:在碱性和渗透胁迫下的特征和差异调控
IF 3.6 3区 生物学
Physiology and Molecular Biology of Plants Pub Date : 2026-08-01 Epub Date: 2026-07-08 DOI: 10.1007/s12298-026-01793-5
Fenqi Chen, Yijian Yu, A Yun, Jinqing Zhang
{"title":"Comprehensive analysis of <i>AsCKX</i> and <i>AsIPT</i> gene families in oat: characterization and differential regulation under alkaline and osmotic stresses.","authors":"Fenqi Chen, Yijian Yu, A Yun, Jinqing Zhang","doi":"10.1007/s12298-026-01793-5","DOIUrl":"10.1007/s12298-026-01793-5","url":null,"abstract":"<p><p>Cytokinins (CTKs) regulate both plant development and responses to abiotic stress. The biosynthesis and degradation of CTKs are primarily governed by the isopentenyl transferase (IPT) and cytokinin oxidase/dehydrogenase (CKX) gene families, respectively. However, a comprehensive analysis of both gene families in oat (<i>Avena sativa</i>) has not yet been performed. Here, we characterized the <i>AsCKX</i> and <i>AsIPT</i> genes and their encoded proteins. Additionally, we determined the levels of 6 types of endogenous CTKs, and the expression patterns of all <i>AsCKX</i> and <i>AsIPT</i> genes under alkaline and osmotic stresses. Our results showed that <i>AsCKX</i> and <i>AsIPT</i> genes exhibit diverse physicochemical properties and specific secondary and tertiary structures. Phylogenetic and synteny analyses revealed that these genes share high homology with homologs in the rice. Multiple segmental duplication events were identified both within the oat genome and between oat and other species, with clear evidence of positive selection for adaptation to abiotic stresses. Meanwhile, these genes contain various cis-acting elements associated with abiotic stresses. Expression pattern analysis indicated that, at 6 h under both alkaline and osmotic stresses, oats may respond to the stress by upregulating <i>AsCKX</i> and downregulating <i>AsIPT</i> genes to reduce the CTK content. With the prolongation of stress duration, differential changes were observed in <i>AsCKX</i> and <i>AsIPT</i> genes between two types of stresses. Interestingly, <i>AsCKX12</i> was identified as a negative regulator during osmotic stress response. This work lays the groundwork for future comprehensive functional characterization of <i>AsCKX</i> and AsIPT genes in oat under alkaline and osmotic stress conditions.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s12298-026-01793-5.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":"32 8","pages":"1773-1790"},"PeriodicalIF":3.6,"publicationDate":"2026-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13438022/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148679682","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Transcription factor ZdWRKY1 positively promotes the biosynthesis of isoquinoline alkaloids in Zanthoxylum dissitum Hemsl. 转录因子ZdWRKY1正促进花椒中异喹啉生物碱的生物合成。
IF 3.6 3区 生物学
Physiology and Molecular Biology of Plants Pub Date : 2026-08-01 Epub Date: 2026-06-20 DOI: 10.1007/s12298-026-01780-w
Congyu Zhang, Yuan Wang, Tingting An, Mingxiu Chen, Wenyan Liu, Fangying Zhou, Xinling Chen, Jikang Sun, Jia Liu
{"title":"Transcription factor ZdWRKY1 positively promotes the biosynthesis of isoquinoline alkaloids in <i>Zanthoxylum dissitum</i> Hemsl.","authors":"Congyu Zhang, Yuan Wang, Tingting An, Mingxiu Chen, Wenyan Liu, Fangying Zhou, Xinling Chen, Jikang Sun, Jia Liu","doi":"10.1007/s12298-026-01780-w","DOIUrl":"10.1007/s12298-026-01780-w","url":null,"abstract":"<p><p><i>Zanthoxylum dissitum</i> Hemsl. (Zanthoxylum) is a traditional Chinese medicine plant usually used to treat gynecological diseases, and isoquinoline alkaloids (IQA) are its most valuable components. In this study, the WRKY transcription factor ZdWRKY1 was identified from Zanthoxylum, and its role in regulating IQA biosynthesis was investigated. Transcriptomic analysis revealed that the expression of <i>ZdWRKY1</i> was positively correlated with the transcript levels of multiple key IQA biosynthetic genes, including <i>ZdNCS</i>, <i>Zd4'OMT</i>, <i>Zd6OMT</i>, <i>ZdBBE</i>, <i>ZdDBOX</i>, and <i>ZdRNMT</i>. Overexpression of <i>ZdWRKY1</i> in transgenic hairy roots increased total alkaloid yield by 1.45-fold (15.07 mg/g) and magnoflorine by 1.37-fold (289.68 µg/g) compared to controls. Dual-luciferase reporter and yeast one-hybrid assays further confirmed that ZdWRKY1 activates the transcription of <i>Zd4'OMT</i> by binding to the <i>W-box</i> element in its promoter, thereby regulating the accumulation of IQA.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s12298-026-01780-w.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":"32 8","pages":"1803-1816"},"PeriodicalIF":3.6,"publicationDate":"2026-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13437854/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148679506","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
ABA treatment on AtAVT6D-overexpressing Arabidopsis thaliana plants results in perturbation of ROS pathway genes. ABA处理过表达atavt6d的拟南芥植株导致ROS通路基因的扰动。
IF 3.6 3区 生物学
Physiology and Molecular Biology of Plants Pub Date : 2026-08-01 Epub Date: 2026-07-21 DOI: 10.1007/s12298-026-01768-6
Arti Narendra Karamchandani, Sandhya Mehrotra, Rajesh Mehrotra
{"title":"ABA treatment on <i>AtAVT6D-</i>overexpressing <i>Arabidopsis thaliana</i> plants results in perturbation of ROS pathway genes.","authors":"Arti Narendra Karamchandani, Sandhya Mehrotra, Rajesh Mehrotra","doi":"10.1007/s12298-026-01768-6","DOIUrl":"10.1007/s12298-026-01768-6","url":null,"abstract":"<p><p>The present work is performed on <i>AtAVT6D</i>-overexpressor and wild-type <i>Arabidopsis thaliana</i> plants. The objective of the study is to examine changes in the gene expression profile after treatment with abscisic acid for 12 h and 24 h using a transcriptomics approach. 24 h-ABA-treated <i>AtAVT6D</i> overexpressors had the highest number of differentially expressed genes [9847] in response to stress compared to wild-type plants. Many of these genes in <i>AtAVT6D</i> overexpressors were involved in ROS scavenging pathways. Gene-ontological analysis of 24 h-ABA-treated plants indicated an increased response to oxygen. The upregulated genes in wild-type plants were related to energy generation pathways. KEGG analysis depicted 'Carbon metabolism', 'Amino acid metabolism', and 'Co-factor biosynthesis' as the enriched pathways at 12 h and 24 h ABA treatment conditions. RNA-sequencing results were validated by RT-qPCR analysis of few candidate genes. The findings in this article are consistent with our previous study on <i>AtAVT6D</i> gene and further demonstrate that <i>AtAVT6D</i> overexpression broadly reprograms the transcriptome in response to ABA, particularly affecting ROS-related pathways. This work will help us understand the role of <i>AtAVT6D</i> gene in detail under stress response.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s12298-026-01768-6.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":"32 8","pages":"1759-1772"},"PeriodicalIF":3.6,"publicationDate":"2026-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13438020/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148679672","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dual effects of ultraviolet radiation (UVR; 280-400 nm) on photosynthesis and stress response in cyanobacterium Synechococcus elongatus PCC 7942. 紫外线辐射(UVR; 280-400 nm)对蓝藻长聚球菌PCC 7942光合作用和胁迫响应的双重影响
IF 3.6 3区 生物学
Physiology and Molecular Biology of Plants Pub Date : 2026-08-01 Epub Date: 2026-07-15 DOI: 10.1007/s12298-026-01797-1
Deepa Pandey, Sapna Tiwari, Anjali Gupta, Priyul Pandey, Shailendra Pratap Singh
{"title":"Dual effects of ultraviolet radiation (UVR; 280-400 nm) on photosynthesis and stress response in cyanobacterium <i>Synechococcus elongatus</i> PCC 7942.","authors":"Deepa Pandey, Sapna Tiwari, Anjali Gupta, Priyul Pandey, Shailendra Pratap Singh","doi":"10.1007/s12298-026-01797-1","DOIUrl":"10.1007/s12298-026-01797-1","url":null,"abstract":"<p><p>While the effects of ultraviolet radiation (UVR; 280-400 nm) on cyanobacterial systems have been extensively documented, the specific impact on photochemical yield remains less understood. To address this gap, we investigated the physiological performance of the model cyanobacterium <i>Synechococcus elongatus</i> PCC 7942 under UVR exposure. Employing Pulse Amplitude Modulation (PAM) fluorometry, a non-invasive technique, we assessed the photochemical efficiency of Photosystem II (PSII). Our data not only corroborate previous findings but also provide novel insights into the potential of UVR to enhance photosynthetic electron transport rates in <i>Synechococcus elongatus</i> PCC 7942. This study examined the combined effects of photosynthetically active radiation (PAR; 400-700 nm) and UVR on the growth and various physiological parameters of this cyanobacterium. Notably, while PAR + UVR negatively influenced growth, it did not compromise overall fitness. The observed enhancement in carotenoid production, modulation of pigment ratios, and maintenance of cellular morphology suggest the activation of acclimatization mechanisms in response to the combined light stress. Despite initial declines in photosynthetic performance, the remarkable recovery and resilience of <i>Synechococcus elongatus</i> PCC 7942 over time underscore its robustness. Consequently, these findings illuminate the resistance mechanisms of this commercially important cyanobacterium to changing light environments, highlighting the dual role of UVR as both an environmental stressor and a trigger for protective physiological responses.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s12298-026-01797-1.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":"32 8","pages":"1901-1918"},"PeriodicalIF":3.6,"publicationDate":"2026-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13437837/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148679620","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Alleviation of drought stress in Poplar (Populus deltoides) by exogenous Silicon and Salicylic acid through modulation of morphology, osmolytes, antioxidant defense system and aquaporin gene expression. 外源硅和水杨酸通过调节杨树形态、渗透酶、抗氧化防御系统和水通道蛋白基因表达缓解干旱胁迫
IF 3.6 3区 生物学
Physiology and Molecular Biology of Plants Pub Date : 2026-07-01 Epub Date: 2026-06-11 DOI: 10.1007/s12298-026-01775-7
Kishan Kumar, Anamika Jangra, Rajendra K Meena, Apurva Malik, Hukum Singh, Nishta Singh, Santan Barthwal
{"title":"Alleviation of drought stress in Poplar (<i>Populus deltoides</i>) by exogenous Silicon and Salicylic acid through modulation of morphology, osmolytes, antioxidant defense system and aquaporin gene expression.","authors":"Kishan Kumar, Anamika Jangra, Rajendra K Meena, Apurva Malik, Hukum Singh, Nishta Singh, Santan Barthwal","doi":"10.1007/s12298-026-01775-7","DOIUrl":"10.1007/s12298-026-01775-7","url":null,"abstract":"<p><p>Drought is a major abiotic constraint hindering the growth and productivity of agricultural as well as forestry species. <i>Populus deltoids,</i> a commercially cultivated agroforestry tree species of India, is highly sensitive to water-deficit stress. In recent years, exogenous Silicon (Si) and Salicylic acid (SA) have emerged as a crucial player in alleviation of drought and other abiotic stresses in plants but their role is poorly investigated in trees. The present study was conducted to examine the effect of foliar spray of 2 mM Si and 3 mM SA in mitigation of water-deficit stress in <i>Populus deltoides.</i> Plant resilience against water-deficit stress was assessed by recording physiological parameters and gene expression analysis under drought stress. Our results showed that individual as well as combined application of Si and SA improved plant height, leaf area and chlorophyll content of stressed poplar. Relative water content and electrolyte leakage was also adjusted to optimum level under stressed plant when sprayed with Si and SA. Explicitly, Si and SA enhanced proline content and superoxide dismutase activity, reduced the toxicity due to reactive oxygen species, and improved the membrane stability during stress conditions. Compared to SA, Si was more responsive in regulation of both class of Tonoplast intrinsic protein and Nodulin 26-like intrinsic protein aquaporins genes in poplar during stress conditions. This study demonstrated that both the individual as well as the combined application of exogenous Si and SA have significantly improved the growth performance of the poplar under water-deficit stress via physio-biochemical and molecular expression.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s12298-026-01775-7.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":"32 7","pages":"1525-1539"},"PeriodicalIF":3.6,"publicationDate":"2026-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13350577/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148423215","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comprehensive analysis of the SmATL gene family and functional validation of SmATL59 in cold stress response in eggplant. SmATL基因家族的综合分析及SmATL59在茄子冷胁迫响应中的功能验证。
IF 3.6 3区 生物学
Physiology and Molecular Biology of Plants Pub Date : 2026-07-01 Epub Date: 2026-06-04 DOI: 10.1007/s12298-026-01769-5
Qiuyan Ban, Yueyang Zhao, Qunxiang Cui, Lu Zhou, Tongjin Liu
{"title":"Comprehensive analysis of the <i>SmATL</i> gene family and functional validation of <i>SmATL59</i> in cold stress response in eggplant.","authors":"Qiuyan Ban, Yueyang Zhao, Qunxiang Cui, Lu Zhou, Tongjin Liu","doi":"10.1007/s12298-026-01769-5","DOIUrl":"10.1007/s12298-026-01769-5","url":null,"abstract":"<p><p>Arabidopsis Tóxicos en Levadura (ATL) proteins are members of the RING-H2-type E3 ubiquitin ligase subfamily and play important roles in plant physiological processes and stress responses. However, their roles in eggplant (<i>Solanum melongena</i>) remain largely unexplored. In this study, 145 putative <i>SmATL</i> family members were identified and systematically analyzed. Phylogenetic analysis classified them into eight subgroups, and chromosomal mapping revealed their uneven distribution across the eggplant genome. Collinearity analysis identified 37 pairs of collinear genes, while gene structure and motif analyses revealed structural diversity and conserved protein motifs among SmATL members. Under cold stress, transcriptomic analysis showed that several <i>SmATL</i> genes were upregulated, with <i>SmATL59</i> showing a strong response. qRT-PCR confirmed the gradual induction of <i>SmATL59</i> during cold treatment. Subcellular localization showed that SmATL59-GFP was mainly localized to the plasma membrane. Overexpression of <i>SmATL59</i> in <i>Nicotiana benthamiana</i> enhanced cold tolerance, reduced ROS accumulation, increased antioxidant enzyme activities, and upregulated cold-responsive genes. Yeast two-hybrid and luciferase complementation imaging assays demonstrated that SmATL59 interacts with SmATG5a. These results highlight the potential role of <i>SmATL59</i> in improving cold stress tolerance.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s12298-026-01769-5.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":"32 7","pages":"1489-1505"},"PeriodicalIF":3.6,"publicationDate":"2026-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13350780/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148423254","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advancements in the role of RPD3-type histone deacetylases in plant development and stress responses. rpd3型组蛋白去乙酰化酶在植物发育和胁迫反应中的作用研究进展。
IF 3.6 3区 生物学
Physiology and Molecular Biology of Plants Pub Date : 2026-07-01 Epub Date: 2026-06-17 DOI: 10.1007/s12298-026-01770-y
Sanjay Kumar Bajpai, Nisha, Ritika Dwivedi, Praveen C Verma
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