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Predicting zoonotic potential of viruses: where are we? 预测病毒的人畜共患潜力:我们在哪里?
IF 5.9 2区 医学
Current opinion in virology Pub Date : 2023-08-01 DOI: 10.1016/j.coviro.2023.101346
Nardus Mollentze , Daniel G Streicker
{"title":"Predicting zoonotic potential of viruses: where are we?","authors":"Nardus Mollentze ,&nbsp;Daniel G Streicker","doi":"10.1016/j.coviro.2023.101346","DOIUrl":"10.1016/j.coviro.2023.101346","url":null,"abstract":"<div><p>The prospect of identifying high-risk viruses and designing interventions to pre-empt their emergence into human populations is enticing, but controversial, particularly when used to justify large-scale virus discovery initiatives. We review the current state of these efforts, identifying three broad classes of predictive models that have differences in data inputs that define their potential utility for triaging newly discovered viruses for further investigation. Prospects for model predictions of public health risk to guide preparedness depend not only on computational improvements to algorithms, but also on more efficient data generation in laboratory, field and clinical settings. Beyond public health applications, efforts to predict zoonoses provide unique research value by creating generalisable understanding of the ecological and evolutionary factors that promote viral emergence.</p></div>","PeriodicalId":11082,"journal":{"name":"Current opinion in virology","volume":"61 ","pages":"Article 101346"},"PeriodicalIF":5.9,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9953771","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Structural basis for respiratory syncytial virus and human metapneumovirus neutralization 呼吸道合胞病毒和人偏肺病毒中和的结构基础
IF 5.9 2区 医学
Current opinion in virology Pub Date : 2023-08-01 DOI: 10.1016/j.coviro.2023.101337
Rose J Miller , Jarrod J Mousa
{"title":"Structural basis for respiratory syncytial virus and human metapneumovirus neutralization","authors":"Rose J Miller ,&nbsp;Jarrod J Mousa","doi":"10.1016/j.coviro.2023.101337","DOIUrl":"10.1016/j.coviro.2023.101337","url":null,"abstract":"<div><p>Respiratory syncytial virus (RSV) and human metapneumovirus (hMPV) continue to be a global burden to infants, the elderly, and immunocompromised individuals. In the past ten years, there has been substantial progress in the development of new vaccine candidates and therapies against these viruses. These advancements were guided by the structural elucidation of the major surface glycoproteins for these viruses, the fusion (F) protein and attachment (G) protein. The identification of immunodominant epitopes on the RSV F and hMPV F proteins has expanded current knowledge on antibody-mediated immune responses, which has led to new approaches for vaccine and therapeutic development through the stabilization of pre-fusion constructs of the F protein and pre-fusion-specific monoclonal antibodies with high potency and efficacy. In this review, we describe structural characteristics of known antigenic sites on the RSV and hMPV proteins, their influence on the immune response, and current progress in vaccine and therapeutic development.</p></div>","PeriodicalId":11082,"journal":{"name":"Current opinion in virology","volume":"61 ","pages":"Article 101337"},"PeriodicalIF":5.9,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10421620/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10050641","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Kaposi sarcoma-associated herpesvirus latency-associated nuclear antigen: more than a key mediator of viral persistence 卡波西肉瘤相关疱疹病毒潜伏期相关核抗原:不仅仅是病毒持久性的关键介质
IF 5.9 2区 医学
Current opinion in virology Pub Date : 2023-08-01 DOI: 10.1016/j.coviro.2023.101336
Thomas F Schulz , Anika Freise , Saskia C Stein
{"title":"Kaposi sarcoma-associated herpesvirus latency-associated nuclear antigen: more than a key mediator of viral persistence","authors":"Thomas F Schulz ,&nbsp;Anika Freise ,&nbsp;Saskia C Stein","doi":"10.1016/j.coviro.2023.101336","DOIUrl":"10.1016/j.coviro.2023.101336","url":null,"abstract":"<div><p>Kaposi sarcoma-associated herpesvirus (KSHV), or human herpesvirus-8, is an oncogenic herpesvirus. Its latency-associated nuclear antigen (LANA) is essential for the persistence of KSHV in latently infected cells. LANA mediates replication of the latent viral genome during the S phase of a dividing cell and partitions episomes to daughter cells by attaching them to mitotic chromosomes. It also mediates the establishment of latency in newly infected cells through epigenetic mechanisms and suppresses the activation of the productive replication cycle. Furthermore, LANA promotes the proliferation of infected cell by acting as a transcriptional regulator and by modulating the cellular proteome through the recruitment of several cellular ubiquitin ligases. Finally, LANA interferes with the innate and adaptive immune system to facilitate the immune escape of infected cells.</p></div>","PeriodicalId":11082,"journal":{"name":"Current opinion in virology","volume":"61 ","pages":"Article 101336"},"PeriodicalIF":5.9,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9941254","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cryo-electron tomography of viral infection — from applications to biosafety 病毒感染的冷冻电子断层扫描——从应用到生物安全
IF 5.9 2区 医学
Current opinion in virology Pub Date : 2023-08-01 DOI: 10.1016/j.coviro.2023.101338
Liv Zimmermann, Petr Chlanda
{"title":"Cryo-electron tomography of viral infection — from applications to biosafety","authors":"Liv Zimmermann,&nbsp;Petr Chlanda","doi":"10.1016/j.coviro.2023.101338","DOIUrl":"10.1016/j.coviro.2023.101338","url":null,"abstract":"<div><p>Cellular cryo-electron tomography (cryo-ET) offers 3D snapshots at molecular resolution capturing pivotal steps during viral infection. However, tomogram quality depends on the vitrification level of the sample and its thickness. In addition, mandatory inactivation protocols to assure biosafety when handling highly pathogenic viruses during cryo-ET can compromise sample preservation. Here, we focus on different strategies applied in cryo-ET and discuss their advantages and limitations with reference to severe acute respiratory syndrome coronavirus 2 studies. We highlight the importance of virus-like particle (VLP) and replicon systems to study virus assembly and replication in a cellular context without inactivation protocols. We discuss the application of chemical fixation and different irradiation methods in cryo-ET sample preparation and acquisition workflows.</p></div>","PeriodicalId":11082,"journal":{"name":"Current opinion in virology","volume":"61 ","pages":"Article 101338"},"PeriodicalIF":5.9,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10003745","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Adenoviral-vectored next-generation respiratory mucosal vaccines against COVID-19 腺病毒载体新一代抗COVID-19呼吸道黏膜疫苗
IF 5.9 2区 医学
Current opinion in virology Pub Date : 2023-08-01 DOI: 10.1016/j.coviro.2023.101334
Sam Afkhami, Alisha Kang, Vidthiya Jeyanathan, Zhou Xing, Mangalakumari Jeyanathan
{"title":"Adenoviral-vectored next-generation respiratory mucosal vaccines against COVID-19","authors":"Sam Afkhami,&nbsp;Alisha Kang,&nbsp;Vidthiya Jeyanathan,&nbsp;Zhou Xing,&nbsp;Mangalakumari Jeyanathan","doi":"10.1016/j.coviro.2023.101334","DOIUrl":"10.1016/j.coviro.2023.101334","url":null,"abstract":"<div><p>The world is in need of next-generation COVID-19 vaccines. Although first-generation injectable COVID-19 vaccines continue to be critical tools in controlling the current global health crisis, continuous emergence of SARS-CoV-2 variants of concern has eroded the efficacy of these vaccines, leading to staggering breakthrough infections and posing threats to poor vaccine responders. This is partly because the humoral and T-cell responses generated following intramuscular injection of spike-centric monovalent vaccines are mostly confined to the periphery, failing to either access or be maintained at the portal of infection, the respiratory mucosa (RM). In contrast, respiratory mucosal-delivered vaccine can induce immunity encompassing humoral, cellular, and trained innate immunity positioned at the respiratory mucosa that may act quickly to prevent the establishment of an infection. Viral vectors, especially adenoviruses, represent the most promising platform for RM delivery that can be designed to express both structural and nonstructural antigens of SARS-CoV-2. Boosting RM immunity via the respiratory route using multivalent adenoviral-vectored vaccines would be a viable next-generation vaccine strategy.</p></div>","PeriodicalId":11082,"journal":{"name":"Current opinion in virology","volume":"61 ","pages":"Article 101334"},"PeriodicalIF":5.9,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10172971/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10306080","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Gradual adaptation of animal influenza A viruses to human-type sialic acid receptors 动物甲型流感病毒对人唾液酸受体的逐渐适应
IF 5.9 2区 医学
Current opinion in virology Pub Date : 2023-06-01 DOI: 10.1016/j.coviro.2023.101314
Mengying Liu, Frank JM van Kuppeveld, Cornelis AM de Haan, Erik de Vries
{"title":"Gradual adaptation of animal influenza A viruses to human-type sialic acid receptors","authors":"Mengying Liu,&nbsp;Frank JM van Kuppeveld,&nbsp;Cornelis AM de Haan,&nbsp;Erik de Vries","doi":"10.1016/j.coviro.2023.101314","DOIUrl":"10.1016/j.coviro.2023.101314","url":null,"abstract":"<div><p>Influenza A viruses (IAVs) originating from animal reservoirs pose continuous threats to human health as demonstrated by the Spanish flu pandemic. Infection starts by attachment to host receptors, a crucial step that is targeted by immunological, prophylactic, and therapeutic intervention. Fine-tuning of virus hemagglutinin binding to host-specific receptor repertoires needs to remain balanced to receptor-destroying neuraminidase (NA) activity and is a key step in host adaptation. It determines NA-dependent virus motility, enabling IAVs to traverse the mucus layer and to bind to, and migrate over, the epithelial cell surface for reaching a location supporting endocytic uptake. Canonical adaptations in enzootic/zoonotic IAVs enhancing human-type receptor binding are well-known, but the context and timespan required for their selection pose many questions. We discuss recent developments, focusing on the dynamic nature of interactions of IAV with the heterogeneous receptor repertoires present in humans and potential intermediate hosts. Potential pre-adaption toward human-type receptor binding in intermediate hosts will be discussed.</p></div>","PeriodicalId":11082,"journal":{"name":"Current opinion in virology","volume":"60 ","pages":"Article 101314"},"PeriodicalIF":5.9,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9650688","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Structural insights into hepatitis C virus neutralization 丙型肝炎病毒中和的结构见解
IF 5.9 2区 医学
Current opinion in virology Pub Date : 2023-06-01 DOI: 10.1016/j.coviro.2023.101316
Luisa J. Ströh , Thomas Krey
{"title":"Structural insights into hepatitis C virus neutralization","authors":"Luisa J. Ströh ,&nbsp;Thomas Krey","doi":"10.1016/j.coviro.2023.101316","DOIUrl":"10.1016/j.coviro.2023.101316","url":null,"abstract":"<div><p>Inspite of the available antiviral therapy, hepatitis C virus (HCV) remains a global health burden and a prophylactic vaccine would help to eliminate the risk to develop chronic liver diseases. Structural insights into the function of the glycoproteins E1 and E2 in virus entry and the interplay with the host’s humoral immune response are key for informed vaccine development. We review recently reported structural insights into receptor binding of HCV glycoproteins and the assembly of an intact membrane-bound E1–E2 heterodimer. These data are used together with available functional data to draw a simplified model of virus entry, which highlights gaps in our current knowledge that warrant further research to fully understand this process at the atomic level.</p></div>","PeriodicalId":11082,"journal":{"name":"Current opinion in virology","volume":"60 ","pages":"Article 101316"},"PeriodicalIF":5.9,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9650689","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Does congenital cytomegalovirus infection contribute to the development of acute lymphoblastic leukemia in children? 先天性巨细胞病毒感染与儿童急性淋巴细胞白血病的发展有关吗?
IF 5.9 2区 医学
Current opinion in virology Pub Date : 2023-06-01 DOI: 10.1016/j.coviro.2023.101325
Rajbir K Toor , Eleanor C Semmes , Kyle M Walsh , Sallie R Permar , Lisa Giulino-Roth
{"title":"Does congenital cytomegalovirus infection contribute to the development of acute lymphoblastic leukemia in children?","authors":"Rajbir K Toor ,&nbsp;Eleanor C Semmes ,&nbsp;Kyle M Walsh ,&nbsp;Sallie R Permar ,&nbsp;Lisa Giulino-Roth","doi":"10.1016/j.coviro.2023.101325","DOIUrl":"10.1016/j.coviro.2023.101325","url":null,"abstract":"<div><p>Cytomegalovirus (CMV) is a ubiquitous herpesvirus that has a profound impact on the host immune system. Congenital cytomegalovirus (cCMV) infection modulates neonatal immune cell compartments, yet the full impact of <em>in utero</em> exposure on developing fetal immune cells remains poorly characterized. A series of recent studies have identified a potential link between cCMV infection and the development of acute lymphoblastic leukemia (ALL) in childhood. Here, we review the emerging evidence linking CMV and ALL risk, discuss what is known about the causes of childhood ALL, and propose how CMV infection in early life may confer increased ALL risk.</p></div>","PeriodicalId":11082,"journal":{"name":"Current opinion in virology","volume":"60 ","pages":"Article 101325"},"PeriodicalIF":5.9,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9704215","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
The roles of nucleic acid editing in adaptation of zoonotic viruses to humans 核酸编辑在人畜共患病毒适应人类中的作用
IF 5.9 2区 医学
Current opinion in virology Pub Date : 2023-06-01 DOI: 10.1016/j.coviro.2023.101326
Jeremy Ratcliff , Peter Simmonds
{"title":"The roles of nucleic acid editing in adaptation of zoonotic viruses to humans","authors":"Jeremy Ratcliff ,&nbsp;Peter Simmonds","doi":"10.1016/j.coviro.2023.101326","DOIUrl":"10.1016/j.coviro.2023.101326","url":null,"abstract":"<div><p>Following spillover, viruses must adapt to new selection pressures exerted by antiviral responses in their new hosts. In mammals, cellular defense mechanisms often include viral nucleic acid editing pathways mediated through protein families apolipoprotein-B mRNA-editing complex (APOBEC) and Adenosine Deaminase Acting on ribonucleic acid (ADAR). APOBECs induce C→U transitions in viral genomes; the APOBEC locus is highly polymorphic with variable numbers of APOBEC3 paralogs and target preferences in humans and other mammals. APOBEC3 paralogs have shaped the evolutionary history of human immunodeficiency virus, with compelling bioinformatic evidence also for its mutagenic impact on monkeypox virus and severe acute respiratory syndrome coronavirus 2. ADAR-1 induces adenose-to-inosine (A→I) substitutions in double-stranded ribonucleic acid (RNA); its role in virus adaptation is less clear, as are epigenetic modifications to viral genomes, such as methylation. Nucleic acid editing restricts evolutionary space in which viruses can explore and may restrict viral-host range.</p></div>","PeriodicalId":11082,"journal":{"name":"Current opinion in virology","volume":"60 ","pages":"Article 101326"},"PeriodicalIF":5.9,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10155873/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10015294","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Colonization of peripheral ganglia by herpes simplex virus type 1 and 2 单纯疱疹病毒1型和2型对周围神经节的定植作用
IF 5.9 2区 医学
Current opinion in virology Pub Date : 2023-06-01 DOI: 10.1016/j.coviro.2023.101333
Kai A Kropp , Guorong Sun , Abel Viejo-Borbolla
{"title":"Colonization of peripheral ganglia by herpes simplex virus type 1 and 2","authors":"Kai A Kropp ,&nbsp;Guorong Sun ,&nbsp;Abel Viejo-Borbolla","doi":"10.1016/j.coviro.2023.101333","DOIUrl":"10.1016/j.coviro.2023.101333","url":null,"abstract":"<div><p>Herpes simplex virus type 1 (HSV-1) and 2 (HSV-2) infect and establish latency in neurons of the peripheral nervous system to persist lifelong in the host and to cause recurrent disease. During primary infection, HSV replicates in epithelial cells in the mucosa and skin and then infects neurites, highly dynamic structures that grow or retract in the presence of attracting or repelling cues, respectively. Following retrograde transport in neurites, HSV establishes latency in the neuronal nucleus. Viral and cellular proteins participate in the chromatinization of the HSV genome that regulates gene expression, persistence, and reactivation. HSV-2 modulates neurite outgrowth during primary infection and upon reactivation, probably to facilitate infection and survival of neurons. Whether HSV-1 modulates neurite outgrowth and the underlying mechanism is currently under investigation. This review deals with HSV-1 and HSV-2 colonization of peripheral neurons, with a focus on the modulation of neurite outgrowth by these viruses.</p></div>","PeriodicalId":11082,"journal":{"name":"Current opinion in virology","volume":"60 ","pages":"Article 101333"},"PeriodicalIF":5.9,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10016874","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
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