Cognitive NeurodynamicsPub Date : 2025-12-01Epub Date: 2025-01-09DOI: 10.1007/s11571-024-10184-z
Qiang Li
{"title":"Visual image reconstructed without semantics from human brain activity using linear image decoders and nonlinear noise suppression.","authors":"Qiang Li","doi":"10.1007/s11571-024-10184-z","DOIUrl":"10.1007/s11571-024-10184-z","url":null,"abstract":"<p><p>In recent years, substantial strides have been made in the field of visual image reconstruction, particularly in its capacity to generate high-quality visual representations from human brain activity while considering semantic information. This advancement not only enables the recreation of visual content but also provides valuable insights into the intricate processes occurring within high-order functional brain regions, contributing to a deeper understanding of brain function. However, considering fusion semantics in reconstructing visual images from brain activity involves semantic-to-image guide reconstruction and may ignore underlying neural computational mechanisms, which does not represent true reconstruction from brain activity. In response to this limitation, our study introduces a novel approach that combines linear mapping with nonlinear noise suppression to reconstruct visual images perceived by subjects based on their brain activity patterns. The primary challenge associated with linear mapping lies in its susceptibility to noise interference. To address this issue, we leverage a flexible denoised deep convolutional neural network, which can suppress noise from linear mapping. Our investigation encompasses linear mapping as well as the training of shallow and deep autoencoder denoised neural networks, including a pre-trained, state-of-the-art denoised neural network. The outcome of our study reveals that combining linear image decoding with nonlinear noise reduction significantly enhances the quality of reconstructed images from human brain activity. This suggests that our methodology holds promise for decoding intricate perceptual experiences directly from brain activity patterns without semantic information. Moreover, the model has strong neural explanatory power because it shares structural and functional similarities with the visual brain.</p>","PeriodicalId":10500,"journal":{"name":"Cognitive Neurodynamics","volume":"19 1","pages":"20"},"PeriodicalIF":3.1,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11718044/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142969971","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cognitive NeurodynamicsPub Date : 2025-12-01Epub Date: 2025-01-13DOI: 10.1007/s11571-024-10212-y
Rituparna Bhattacharyya, Brajesh Kumar Jha
{"title":"A fuzzy based computational model to analyze the influence of mitochondria, buffer, and ER fluxes on cytosolic calcium distribution in neuron cells.","authors":"Rituparna Bhattacharyya, Brajesh Kumar Jha","doi":"10.1007/s11571-024-10212-y","DOIUrl":"10.1007/s11571-024-10212-y","url":null,"abstract":"<p><p>A free calcium ion in the cytosol is essential for many physiological and physical functions. Also, it is known as a second messenger as the quantity of free calcium ions is an essential part of brain signaling. In this work, we have attempted to study calcium signaling in the presence of mitochondria, buffer, and endoplasmic reticulum fluxes. Small organelles called mitochondria are found in the nervous system and are involved in several cellular functions, including energy production, response to stress, calcium homeostasis regulation, and pathways leading to cell death. It has been discovered that buffer, endoplasmic reticulum, and mitochondria significantly affect calcium signaling. To investigate how various circumstances impact the quantity of calcium in the cytosol, a mathematical model of a second-order linear partial differential equation with fuzzy boundary conditions has been developed. Systems having ambiguous or imprecise boundary values can be effectively modeled and simulated with the help of fuzzy boundary conditions. Models can provide more dependable and instructive outcomes and become adaptable to real-world circumstances by implementing fuzzy logic into boundary conditions. In this paper, we observed the Fuzzy Laplace Transform to solve variable coefficient fuzzy differential equations using triangular fuzzy numbers. It is noted that maintaining the delicate calcium ion balance, which controls essential cellular functions, depends on the buffer affinity. Also, neurodegenerative illnesses like Alzheimer's, Parkinson's, etc. are linked to disruptions in the control of components such as buffers, mitochondria, and the endoplasmic reticulum.</p>","PeriodicalId":10500,"journal":{"name":"Cognitive Neurodynamics","volume":"19 1","pages":"25"},"PeriodicalIF":3.1,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11729615/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143001552","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Svante Resjö, Iqra, Nam P Kieu, Muhammad Awais Zahid, Marit Lenman, Björn Andersson, Erik Andreasson
{"title":"Late blight field resistance in potatoes carrying <i>Solanum americanum</i> resistance genes (Rpi-amr3 and Rpi-amr1).","authors":"Svante Resjö, Iqra, Nam P Kieu, Muhammad Awais Zahid, Marit Lenman, Björn Andersson, Erik Andreasson","doi":"10.1080/21645698.2025.2479913","DOIUrl":"10.1080/21645698.2025.2479913","url":null,"abstract":"<p><p>Potato (<i>Solanum tuberosum</i> L.) is an important global crop, but its production is severely impacted by late blight, caused by the pathogen <i>Phytophthora infestans</i>. The economic burden of this disease is significant, and current control strategies rely mainly on fungicides, which face increasing regulatory and environmental constraints. To address this challenge, potatoes with resistance genes from wild potato relatives offer a promising solution. This study evaluated field resistance to late blight in potato lines (Maris Piper) containing the <i>Solanum americanum</i> resistance genes <i>Rpi-amr3</i> and <i>Rpi-amr1</i> across three years (2018-2020) in Sweden. Field trials were conducted under natural infection conditions to assess disease resistance. Results showed that the transgenic lines conferred strong resistance to late blight compared to the susceptible control. However, slight late blight symptoms were observed in the transgenic lines. These results highlight the effectiveness of <i>S. americanum</i> resistance genes in providing strong resistance, and emphasize the potential of stacking multiple R genes, including these genes to maintain efficacy. This research supports the development of resistant potato varieties as a sustainable alternative to chemical control, promoting food security and environmentally friendly agriculture.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"16 1","pages":"263-271"},"PeriodicalIF":4.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11934159/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143694331","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The potential associations between acupuncture sensation and brain functional network: a EEG study.","authors":"Dongyang Shen, Banghua Yang, Jing Li, Jiayang Zhang, Yongcong Li, Guofu Zhang, Yanyan Zheng","doi":"10.1007/s11571-025-10233-1","DOIUrl":"10.1007/s11571-025-10233-1","url":null,"abstract":"<p><p>Acupuncture has been widely used as an effective treatment for post-stroke rehabilitation. However, the potential association between acupuncture sensation, an important factor influencing treatment efficacy, and brain functional network is unclear. This research sought to reveal and quantify the changes in brain functional network associated with acupuncture sensation. So multi-channel EEG signals were collected from 30 healthy participants and the Massachusetts General Hospital Acupuncture Sensation Scale (MASS) was utilized to assess their needling sensations. Phase Lag Index (PLI) was used to construct the brain functional network, which was analyzed with graph theoretic methods. It showed that in the needle insertion (NI) state the MASS Index was significantly higher than in the needle retention (NR) state (<i>P</i> < 0.001), and the mean values of PLI were also higher than in the Pre-Rest state and NR state significantly (<i>P</i> < 0.01). In the NI state global efficiency, local efficiency, nodal efficiency, and degree centrality were significantly higher than in the Pre-Rest state and the NR state (<i>P</i> < 0.05), while the opposite is true for the shortest path length (<i>P</i> < 0.01). Then Pearson correlation analysis showed a correlation between MASS Index and graph theory metrics (<i>P</i> < 0.05). Finally, Support Vector Regression (SVR) was used to predict the MASS Index with a minimum mean absolute error of 0.65. These findings suggest that the NI state of acupuncture treatment changes the structure of the brain functional network and affects the graph theory metrics of the brain functional network, which may be an objective biomarker for quantitative evaluation of acupuncture sensation.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s11571-025-10233-1.</p>","PeriodicalId":10500,"journal":{"name":"Cognitive Neurodynamics","volume":"19 1","pages":"49"},"PeriodicalIF":3.1,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11910458/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143647571","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Transcriptome and nutritional composition analysis of stacked transgenic maize with insect resistance and herbicide tolerance.","authors":"Xiaoxing Yu, Hongyu Gao, Pengfei Wang","doi":"10.1080/21645698.2025.2472451","DOIUrl":"10.1080/21645698.2025.2472451","url":null,"abstract":"<p><p>The safety assessment of stacked transgenic crops is essential for their commercial cultivation. A crucial element of safety assessment is the nutritional evaluation of transgenic crops. Currently, profiling methods like transcriptome are employed as supplemental analytical tools to find the unintended effects of transgenic crops. In this study, stacked transgenic maize ZDRF8×nCX-1 was produced by crossing of two transgenic maize events ZDRF8 and nCX-1. This stacked transgenic maize expresses five genes: <i>cry1Ab</i>, <i>cry2Ab</i> and <i>g10evo-epsps</i> (from ZDRF8), as well as <i>cp4 epsps</i> and <i>P450-N-Z1</i> (from nCX-1). Molecular analysis showed that the insertion sites of target genes were not changed during stack breeding, and the target genes are effectively expressed at both RNA and protein levels in ZDRF8×nCX-1. Target trait analysis showed that ZDRF8×nCX-1 exhibits tolerant to glyphosate, flazasulfuron and MCPA, and is resistant to damage by corn borers. Transcriptome analysis revealed that gene-stacked maize ZDRF8×nCX-1 did not significantly alter transcriptome profiles compared to the transgenic maize events ZDRF8 and nCX-1. Nutritional composition analysis showed that the grain profile of ZDRF8×nCX-1 was substantially equivalent to that of the non-transgenic counterpart. These results suggest that hybrid stacking does not cause significantly unintended effects beyond providing the intended beneficial traits.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"16 1","pages":"216-234"},"PeriodicalIF":4.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11875497/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143525246","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Statement of Retraction: Myricetin nanoliposomes induced SIRT3-mediated glycolytic metabolism leading to glioblastoma cell death.","authors":"","doi":"10.1080/21691401.2025.2465942","DOIUrl":"https://doi.org/10.1080/21691401.2025.2465942","url":null,"abstract":"","PeriodicalId":8736,"journal":{"name":"Artificial Cells, Nanomedicine, and Biotechnology","volume":"53 1","pages":"56"},"PeriodicalIF":4.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143717889","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Cross-patient seizure prediction via continuous domain adaptation and similar sample replay.","authors":"Ziye Zhang, Aiping Liu, Yikai Gao, Ruobing Qian, Xun Chen","doi":"10.1007/s11571-024-10216-8","DOIUrl":"10.1007/s11571-024-10216-8","url":null,"abstract":"<p><p>Seizure prediction based on electroencephalogram (EEG) for people with epilepsy, a common brain disorder worldwide, has great potential for life quality improvement. To alleviate the high degree of heterogeneity among patients, several works have attempted to learn common seizure feature distributions based on the idea of domain adaptation to enhance the generalization ability of the model. However, existing methods ignore the inherent inter-patient discrepancy within the source patients, resulting in disjointed distributions that impede effective domain alignment. To eliminate this effect, we introduce the concept of multi-source domain adaptation (MSDA), considering each source patient as a separate domain. To avoid additional model complexity from MSDA, we propose a continuous domain adaptation approach for seizure prediction based on the convolutional neural network (CNN), which performs sequential training on multiple source domains. To relieve the model catastrophic forgetting during sequential training, we replay similar samples from each source domain, while learning common feature representations based on subdomain alignment. Evaluated on a publicly available epilepsy dataset, our proposed method attains a sensitivity of 85.0% and a false alarm rate (FPR) of 0.224/h. Compared to the prevailing domain adaptation paradigm and existing domain adaptation works in the field, the proposed method can efficiently capture the knowledge of different patients, extract better common seizure representations, and achieve state-of-the-art performance.</p>","PeriodicalId":10500,"journal":{"name":"Cognitive Neurodynamics","volume":"19 1","pages":"26"},"PeriodicalIF":3.1,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11735696/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143001017","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lelethu Mdoda, Nthabeleng Tamako, Lungile S Gidi, Denver Naidoo
{"title":"Evaluating the impact of improved maize varieties on agricultural productivity and technical efficiency among smallholder farmers in the Eastern Cape, South Africa: an empirical analysis.","authors":"Lelethu Mdoda, Nthabeleng Tamako, Lungile S Gidi, Denver Naidoo","doi":"10.1080/21645698.2025.2476667","DOIUrl":"10.1080/21645698.2025.2476667","url":null,"abstract":"<p><p>Agriculture is essential to South Africa's economy, and maize is a crucial crop for smallholder farmers in the Eastern Cape. Traditional maize varieties face challenges related to productivity and resilience, prompting the promotion of Improved Maize Varieties (IMVs) to enhance yields and efficiency. This study investigates the impact of IMV adoption on agricultural productivity and technical efficiency in the region, addressing a gap in empirical evidence. Using a multistage random sampling approach, data was collected from 150 smallholder maize farmers and analyzed using stochastic production frontier, endogenous switching regression models, and the stochastic meta-frontier model. The study results reveal that 62% of the farmers are male, averaging 53 years old, and manage about four hectares with a mean monthly income of ZAR 3,562.13. Challenges, such as rainfall shortages and limited access to credit, hinder IMV adoption, although high access to extension services and diverse input use positively affect productivity. The adopted IMVs by farmers, including open-pollinated, hybrid, and genetically modified (GM) varieties, significantly boost maize yields and farm returns - yielding an average increase of 1.92 kg/ha and returns of ZAR 468.01 per hectare. Key adoption factors are education, farm size, and access to seeds and extension services, whereas barriers include market distance and family size. Technical efficiency is generally high at 74%, with farm size, seed, pesticides, agrochemicals, and fertilizers positively impacting maize production, whereas family labor negatively affects it. Factors such as age, education, and access to services significantly reduce technical inefficiency, while herd size, off-farm income, and distance to the market have mixed effects. The stochastic meta-frontier approach reveals that smallholder farmers adopting improved technologies show higher mean technical efficiency, indicating that advanced methods contribute to better resource use and productivity than traditional systems. This study suggests that targeted support is needed for farmers, enhancing access to extension services, affordable seeds, financial support, and investing in infrastructure and education can further improve adoption rates, technical efficiency, and overall productivity. Promoting improved technologies such as maize varieties will enhance the technical efficiency of farms, regardless of their adoption status. It would be key to improving overall agricultural productivity and farm household incomes.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"16 1","pages":"272-304"},"PeriodicalIF":4.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11925116/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143659599","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
OrganogenesisPub Date : 2025-12-01Epub Date: 2025-04-07DOI: 10.1080/15476278.2025.2489670
Linjuan Wu, Jingchuan Lin
{"title":"Optimized Individualized Nursing Improves Recovery and Reduces Complications in ICU Patients with Severe Pneumonia.","authors":"Linjuan Wu, Jingchuan Lin","doi":"10.1080/15476278.2025.2489670","DOIUrl":"https://doi.org/10.1080/15476278.2025.2489670","url":null,"abstract":"<p><strong>Objective: </strong>This study evaluates the effectiveness of optimized individualized nursing interventions on clinical outcomes in intensive care unit (ICU) patients with severe pneumonia.</p><p><strong>Methods: </strong>In this randomized controlled trial, 76 patients with severe pneumonia were randomized into a control group and an experimental group. Both groups received routine nursing care. On this basis, the experimental group received optimized individualized nursing. After the nursing intervention, clinical outcomes, respiratory function, coagulation function, Acute Physiology and Chronic Health Evaluation II (APACHE II) score, and St. George's Respiratory Problems Questionnaire (SGRQ) score were assessed, and the complication and mortality rates were counted.</p><p><strong>Results: </strong>After the intervention, compared with the control group, the experimental group exhibited shorter times of fever reduction, white blood cell count recovery, and off-boarding and ICU stay, higher oxygenation index, lower rapid shallow breathing index, respiratory rate, activated partial thromboplastin time, prothrombin time, fibrinogen, and D-Dimer levels, lower APACHE II scores and SGRQ scores (<i>p</i> < 0.05). Additionally, the experimental group possessed a lower complication rate and mortality rate than the control group (<i>p</i> < 0.05).</p><p><strong>Conclusion: </strong>Implementing optimized individualized nursing can significantly enhance recovery and reduce complications in ICU patients with severe pneumonia.</p>","PeriodicalId":19596,"journal":{"name":"Organogenesis","volume":"21 1","pages":"2489670"},"PeriodicalIF":1.6,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143796129","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}