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Exploring the potential of phage and their applications. 探索噬菌体的潜力及其应用。
3区 生物学
Progress in Molecular Biology and Translational Science Pub Date : 2023-01-01 Epub Date: 2023-05-11 DOI: 10.1016/bs.pmbts.2023.04.001
Khushal Khambhati, Gargi Bhattacharjee, Nisarg Gohil, Rupesh Maurya, Vijai Singh
{"title":"Exploring the potential of phage and their applications.","authors":"Khushal Khambhati,&nbsp;Gargi Bhattacharjee,&nbsp;Nisarg Gohil,&nbsp;Rupesh Maurya,&nbsp;Vijai Singh","doi":"10.1016/bs.pmbts.2023.04.001","DOIUrl":"https://doi.org/10.1016/bs.pmbts.2023.04.001","url":null,"abstract":"<p><p>Antibiotic resistant microorganisms are significantly increasing due to horizontal gene transfer, mutation and overdose of antibiotics leading to serious health conditions globally. Several multidrug resistant microorganisms have shown resistance to even the last line of antibiotics making it very difficult to treat them. Besides using antibiotics, an alternative approach to treat such resistant bacterial pathogens through the use of bacteriophage (phage) was used in the early 1900s which however declined and vanished after the discovery of antibiotics. In recent times, phage has emerged and gained interest as an alternative approach to antibiotics to treat MDR pathogens. Phage can self-replicate by utilizing cellular machinery of bacterial host by following lytic and lysogenic life cycles and therefore suitable for rapid regeneration. Application of phage for detection of bacterial pathogens, elimination of bacteria, agents for controlling food spoilage, treating human disease and several others entitles phage as a futuristic antibacterial armamentarium.</p>","PeriodicalId":49280,"journal":{"name":"Progress in Molecular Biology and Translational Science","volume":"200 ","pages":"1-12"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41155151","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Isolation, screening and characterization of phage. 噬菌体的分离、筛选和鉴定。
3区 生物学
Progress in Molecular Biology and Translational Science Pub Date : 2023-01-01 Epub Date: 2023-04-07 DOI: 10.1016/bs.pmbts.2023.03.008
Bishoy Maher Zaki, Amira A Mohamed, Alyaa Dawoud, Kareem Essam, Zainab K Hammouda, Abdallah S Abdelsattar, Ayman El-Shibiny
{"title":"Isolation, screening and characterization of phage.","authors":"Bishoy Maher Zaki,&nbsp;Amira A Mohamed,&nbsp;Alyaa Dawoud,&nbsp;Kareem Essam,&nbsp;Zainab K Hammouda,&nbsp;Abdallah S Abdelsattar,&nbsp;Ayman El-Shibiny","doi":"10.1016/bs.pmbts.2023.03.008","DOIUrl":"https://doi.org/10.1016/bs.pmbts.2023.03.008","url":null,"abstract":"<p><p>Bacterial resistance threatens public health due to a lack of novel antibacterial classes since the 21<sup>st</sup> century. Bacteriophages, the most ubiquitous microorganism on Earth and natural predators of bacteria, have the potential to save the world from the post-antibiotic era. Therefore, phage isolation and characterization are in high demand to find suitable phages for therapeutic and bacterial control applications. The chapter presents brief guidance supported by recommendations on the isolation of phages, and initial screening of phage antimicrobial efficacy, in addition to, conducting comprehensive characterization addressing morphological, biological, genomic, and taxonomic features.</p>","PeriodicalId":49280,"journal":{"name":"Progress in Molecular Biology and Translational Science","volume":"200 ","pages":"13-60"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41162103","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Phage and phage cocktails formulations. 噬菌体和噬菌体鸡尾酒配方。
3区 生物学
Progress in Molecular Biology and Translational Science Pub Date : 2023-01-01 Epub Date: 2023-05-05 DOI: 10.1016/bs.pmbts.2023.04.007
Indra Mani
{"title":"Phage and phage cocktails formulations.","authors":"Indra Mani","doi":"10.1016/bs.pmbts.2023.04.007","DOIUrl":"https://doi.org/10.1016/bs.pmbts.2023.04.007","url":null,"abstract":"<p><p>Antibiotic-resistant bacterial infection is a major global problem and can be life-threatening. Bacteriophages or phages can be substituted choice over traditional antibiotics treatments. Phages are natural obligate parasites viruses of bacteria, and they can infect and kill antibiotic-sensitive and -resistant bacteria. Further, phages can be utilised as antibacterial agents against various kinds of bacterial infectious diseases. As compared to antibiotics, phages can show a more variety of modes of action and can also be safe in several cases. Phages as a mixture (cocktail) of viral strains are usually used in clinical practices. Generally, to propagate phage cocktails, the individual phage is grown and then mixed to prepare phage cocktails. Antibiotic resistance and biofilm formation can be controlled through formulating phage cocktails that comprise phages infecting single species or by combining phages with non-phages (antibiotics), which may result in a broad spectrum of activity. This chapter briefly highlights the formulations and application of phage cocktails, which are being used to treat various bacterial infections.</p>","PeriodicalId":49280,"journal":{"name":"Progress in Molecular Biology and Translational Science","volume":"200 ","pages":"159-169"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41177338","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phage engineering for development of diagnostic tools. 用于开发诊断工具的噬菌体工程。
3区 生物学
Progress in Molecular Biology and Translational Science Pub Date : 2023-01-01 Epub Date: 2023-06-26 DOI: 10.1016/bs.pmbts.2023.04.004
Subha Sankar Paul
{"title":"Phage engineering for development of diagnostic tools.","authors":"Subha Sankar Paul","doi":"10.1016/bs.pmbts.2023.04.004","DOIUrl":"https://doi.org/10.1016/bs.pmbts.2023.04.004","url":null,"abstract":"<p><p>The bacteriophages rely on the host cell to provide energy and resources for their own replication. Antibody-based diagnostic tests rely on the antibody and the biomarker interactions. Since, most of these diagnostic tools employ the use of antibodies; hence, they require intensive storage protocols at cold conditions and incur high time and capital cost due to their production and purification process. Phage-based diagnostics can overcome this limitation. Bacteriophages, have been used as emerging tools for the detection of various pathogens. Rapid phage-mediated detection assays have become commercial diagnostic tools. Conventional method and new cloning approaches have been followed to specifically detect a disease- causing microbial strains. This review discusses use of Phage typing as diagnostic tools, phage-based detection methods, and their usage for signal amplification. Design rules for reporter phage engineering are also discussed followed by different engineering platforms for phage genome editing. We also discuss recent examples of how phage research is influencing the recent advances in the development of phage-based diagnostics for ultra-sensitive detection of various bio-species, outlining the advantages and limitations of detection technology of phage-based assays.</p>","PeriodicalId":49280,"journal":{"name":"Progress in Molecular Biology and Translational Science","volume":"200 ","pages":"91-101"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41178986","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phages for treatment of Salmonella spp infection. 用于治疗沙门氏菌感染的噬菌体。
3区 生物学
Progress in Molecular Biology and Translational Science Pub Date : 2023-01-01 Epub Date: 2023-04-14 DOI: 10.1016/bs.pmbts.2023.03.020
V Baskaran, L Karthik
{"title":"Phages for treatment of Salmonella spp infection.","authors":"V Baskaran,&nbsp;L Karthik","doi":"10.1016/bs.pmbts.2023.03.020","DOIUrl":"https://doi.org/10.1016/bs.pmbts.2023.03.020","url":null,"abstract":"<p><p>Salmonella, is one of the bacterial genera having more than 2500 serogroups is one of the most prominent food borne pathogen that is capable of causing disease out breaks among humans and animals. Recent reports clearly shows that this pathogen is evolved and it developed drug resistant towards most of the commercially available antibiotics. In order to overcome this emerging resistance, Bacteriophage therapy is one of the alternative solutions. It is more pathogen specific, high potency, and thereby highly safe for consumption. This chapter discuss about Rapid screening and Detection Methods Associated with Bacteriophage for Salmonella, commercially available phage products and regulatory status, Salmonella endolysins and future prospects of phage therapy.</p>","PeriodicalId":49280,"journal":{"name":"Progress in Molecular Biology and Translational Science","volume":"200 ","pages":"241-273"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41153219","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phages for treatment of Escherichia coli infections. 用于治疗大肠杆菌感染的噬菌体。
3区 生物学
Progress in Molecular Biology and Translational Science Pub Date : 2023-01-01 Epub Date: 2023-06-17 DOI: 10.1016/bs.pmbts.2023.03.011
Nikita Nikulin, Alexandra Nikulina, Andrei Zimin, Rustam Aminov
{"title":"Phages for treatment of Escherichia coli infections.","authors":"Nikita Nikulin,&nbsp;Alexandra Nikulina,&nbsp;Andrei Zimin,&nbsp;Rustam Aminov","doi":"10.1016/bs.pmbts.2023.03.011","DOIUrl":"https://doi.org/10.1016/bs.pmbts.2023.03.011","url":null,"abstract":"<p><p>Diseases due to infections by pathogenic Escherichia coli strains are on the rise and with the growing antimicrobial resistance among bacterial pathogens, including this group. Thus, alternative therapeutic options are actively investigated. Among these alternatives is phage therapy. In the case of E. coli, the combination of the well understood biology of this species and its bacteriophages represents a good guiding example for the establishment of phage therapy principles against this and other pathogenic bacteria. In this chapter, the procedures toward the development of phage therapy against pathogenic E. coli with the use of T-even group of phages are discussed. These steps involve the isolation, purification, characterisation and large-scale production of these phages, with formulation of phage cocktails for in vitro and in vivo studies. The main emphasis is made on phage therapy of enteropathogenic E. coli O157:H, which is one of the prominent human pathogens but persists as a commensal bacterium in many food animals. The implementation of phage therapy against E. coli O157:H within the One Health framework in carrier animals and for treatment of meat, vegetables, fruits and other agricultural produce thus would allow controlling and interrupting the transmission routes of this pathogen to the human food chain and preventing human disease. Examples of successful control and elimination of E. coli O157:H are given, while the problems encountered in phage treatment of this pathogen are also discussed.</p>","PeriodicalId":49280,"journal":{"name":"Progress in Molecular Biology and Translational Science","volume":"200 ","pages":"171-206"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41169459","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bacteriophage as cargo and its application in nanomedicine. 噬菌体及其在纳米医学中的应用。
3区 生物学
Progress in Molecular Biology and Translational Science Pub Date : 2023-01-01 Epub Date: 2023-04-20 DOI: 10.1016/bs.pmbts.2023.03.024
Vishnu Kirthi Arivarasan, Chitrakshi Consul
{"title":"Bacteriophage as cargo and its application in nanomedicine.","authors":"Vishnu Kirthi Arivarasan,&nbsp;Chitrakshi Consul","doi":"10.1016/bs.pmbts.2023.03.024","DOIUrl":"https://doi.org/10.1016/bs.pmbts.2023.03.024","url":null,"abstract":"<p><p>Bacteriophages are viruses that infect the bacteria. However, different studies conducted on the same display a wide range of applications in terms of therapeutic purposes. The structure of a bacteriophage includes the head (site for the storage of its genetic material) and a tail (serves the purpose of detection, ligand-receptor binding and insertion of the genetic material into the host organism). The head being a storehouse of genetic material, the contents of the same are often manipulated for therapeutic purposes. In some cases, these bacteriophages are modified as virus like particles (VLPs), which are employed as carriers for transportation of the desired components to the target site, thereby being reliable alternatives for therapeutic purposes. The distinctive properties of these VLPs include their biocompatibility, abundant space for accommodation of desired components, bio processivity, target specificity, does not interfere with the on-going metabolic processes; thereby being agents of choice for various therapeutic purposes. The bacteriophages play significant roles in delivery of certain components thereby enhancing their therapeutic applications. These include biomolecules such as enzymes, peptide-based drugs, CRISPR along with others. Apart from this, bacteriophage targeted delivery has also shown promising results in cancer treatments and vaccination strategies. Bacteriophages are therefore, promising delivery agents and can be opted for delivery of either single or combination of compounds in future treatment strategies.</p>","PeriodicalId":49280,"journal":{"name":"Progress in Molecular Biology and Translational Science","volume":"201 ","pages":"173-189"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41122516","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phage therapy in gut microbiome. 肠道微生物组的噬菌体疗法。
3区 生物学
Progress in Molecular Biology and Translational Science Pub Date : 2023-01-01 Epub Date: 2023-05-02 DOI: 10.1016/bs.pmbts.2023.04.005
Xingyao Chen, Beatriz G Mendes, Bruno Secchi Alves, Yi Duan
{"title":"Phage therapy in gut microbiome.","authors":"Xingyao Chen,&nbsp;Beatriz G Mendes,&nbsp;Bruno Secchi Alves,&nbsp;Yi Duan","doi":"10.1016/bs.pmbts.2023.04.005","DOIUrl":"10.1016/bs.pmbts.2023.04.005","url":null,"abstract":"<p><p>Phage therapy, the use of bacteriophage viruses for bacterial infection treatment, has been around for almost a century, but with the increase in antibiotic use, its importance has declined rapidly. There has been renewed interest in revisiting this practice due to the general decline in the effectiveness of antibiotics, combined with improved understanding of human microbiota and advances in sequencing technologies. Phage therapy has been proposed as a clinical alternative to restore the gut microbiota in the absence of an effective treatment. That is due to its immunomodulatory and bactericidal effects against its target bacteria. In the gastrointestinal diseases field, phage therapy has been studied mainly as a promising tool in infectious diseases treatment, such as cholera and diarrhea. However, many studies have been conducted in non-communicable diseases, such as the targeting of adherent invasive Escherichia coli in Crohn's disease, the treatment of Clostridioides difficile in ulcerative colitis, the eradication of Fusobacterium nucleatum in colorectal cancer, the targeting of alcohol-producing Klebsiella pneumoniae in non-alcoholic fatty liver disease, or Enterococcus faecalis in alcohol-associated hepatitis. This review will summarize the changes in the gut microbiota and the phageome in association with some gastrointestinal and liver diseases and highlight the recent scientific advances in phage therapy as a therapeutic tool for their treatment.</p>","PeriodicalId":49280,"journal":{"name":"Progress in Molecular Biology and Translational Science","volume":"201 ","pages":"93-118"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41155688","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phage for regenerative medicine and cosmetics. 再生医学和化妆品的噬菌体。
3区 生物学
Progress in Molecular Biology and Translational Science Pub Date : 2023-01-01 Epub Date: 2023-04-06 DOI: 10.1016/bs.pmbts.2023.03.017
Nhat-Le Bui, Mai Anh Nguyen, Manh-Long Nguyen, Quoc-Cuong Bui, Dinh-Toi Chu
{"title":"Phage for regenerative medicine and cosmetics.","authors":"Nhat-Le Bui,&nbsp;Mai Anh Nguyen,&nbsp;Manh-Long Nguyen,&nbsp;Quoc-Cuong Bui,&nbsp;Dinh-Toi Chu","doi":"10.1016/bs.pmbts.2023.03.017","DOIUrl":"https://doi.org/10.1016/bs.pmbts.2023.03.017","url":null,"abstract":"<p><p>Phage or bacteriophage is a specific virus with the ability to defeat bacteria. Because of the rising prevalence of antimicrobial-resistant bacteria, the bacteriophage is now receiving interest again, with it application in skin infection or acne treatment. Moreover, bacteriophages also express their efficacy in wound healing or skin regeneration. Thanks to the development of bioengineering technology, phage display, which is a technique using bacteriophage as a tool, has recently been applied in many biotechnological and medical fields, especially in regenerative medicines. Bacteriophages can be used as nanomaterials, delivery vectors, growth factor alternatives, or in several bacteriophage display-derived therapeutics and stem cell technology. Although bacteriophage is no doubt to be a potential and effective alternative in modern medicine, there are still controversial evidence about the antibacterial efficacy as well as the affinity to expected targets of bacteriophage. Future mission is to optimize the specificity, stability, affinity and biodistribution of phage-derived substances. In this chapter, we focused on introducing several mechanisms and applications of bacteriophage and analyzing its future potential in regenerative medicines as well as cosmetics via previous research's results.</p>","PeriodicalId":49280,"journal":{"name":"Progress in Molecular Biology and Translational Science","volume":"201 ","pages":"241-259"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41167414","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Human Microbiome in Health and Disease - Part B 健康和疾病中的人类微生物组- B部分
3区 生物学
Progress in Molecular Biology and Translational Science Pub Date : 2022-01-01 DOI: 10.1016/s1877-1173(22)x0008-2
{"title":"Human Microbiome in Health and Disease - Part B","authors":"","doi":"10.1016/s1877-1173(22)x0008-2","DOIUrl":"https://doi.org/10.1016/s1877-1173(22)x0008-2","url":null,"abstract":"","PeriodicalId":49280,"journal":{"name":"Progress in Molecular Biology and Translational Science","volume":"1 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"57018665","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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