Journal of the American Society for Horticultural Science最新文献

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Development and Characterization of Expressed Sequence-tagged Simple Sequence Repeat Markers for Denphal-type Dendrobium Cultivars and Transferability to Dendrobium Species Denphal型石斛品种表达序列标记简单序列重复标记的建立、鉴定及其对石斛属植物的可转移性
IF 1.9 4区 农林科学
Journal of the American Society for Horticultural Science Pub Date : 2022-11-01 DOI: 10.21273/jashs05250-22
S. Yi, Mingzhong Huang, Guangsui Yang, Junhai Niu, Shunjiao Lu, Junmei Yin, Zhiqun Zhang
{"title":"Development and Characterization of Expressed Sequence-tagged Simple Sequence Repeat Markers for Denphal-type Dendrobium Cultivars and Transferability to Dendrobium Species","authors":"S. Yi, Mingzhong Huang, Guangsui Yang, Junhai Niu, Shunjiao Lu, Junmei Yin, Zhiqun Zhang","doi":"10.21273/jashs05250-22","DOIUrl":"https://doi.org/10.21273/jashs05250-22","url":null,"abstract":"Denphal-type Dendrobium is the most popular orchid for cut flower and potted plant trade. To improve commercial traits, many novel cultivars have been produced through hybridization by commercial breeders. However, the genetic relationship of most cultivars is unclear, thus hindering the progress of Denphal-type Dendrobium breeding programs. Therefore, the development of molecular markers is encouraged to identify different cultivars. In this study, based on the transcriptome database of the Denphal-type Dendrobium ‘Red Bull’, the polymorphisms expressed sequence tag-derived simple sequence repeat (EST-SSR) were developed from 100 pairs EST-SSRs that were randomly selected from the EST-SSR database. The genetic relationship of 42 Denphal-type Dendrobium cultivars was analyzed according to the developed EST-SSRs. Then, the transferability of EST-SSRs was analyzed by performing a relationship analysis of 40 Dendrobium species. The results showed that a total of 5174 potential EST-SSR markers were identified with 4486 unigene sequences, and 5289 primer pairs were successfully designed. Of the selected 100 pairs of EST-SSRs, a total of 86 pairs produced the expected polymerase chain reaction products of the primary screening, 58 pairs produced the expected fragment size, and 20 pairs showed polymorphisms. Furthermore, the dendrogram of 42 cultivars showed that at a genetic distance of 0.15, the cultivars collected were grouped into five clusters of three major clusters and two minor clusters; all these clusters had the same characters of each cluster. The transferability analysis showed that 18 of the 20 EST-SSR markers among the 40 Dendrobium species were polymorphic. Overall, this study developed EST-SSR markers and will be valuable to facilitating genetic diversity in Denphal-type Dendrobium cultivars and Dendrobium species.","PeriodicalId":17226,"journal":{"name":"Journal of the American Society for Horticultural Science","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2022-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42167023","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of MicroRNAs Related to Phytohormone Signal Transduction and Self-incompatibility of Rabbiteye Blueberry Pollen 与植物激素信号转导及拉比蓝莓花粉自交不亲和性相关的微小RNA的鉴定
IF 1.9 4区 农林科学
Journal of the American Society for Horticultural Science Pub Date : 2022-11-01 DOI: 10.21273/jashs05143-21
Qingrou Yang, Yan Fu, Tingting Zhang, Shu Peng, Jie Deng
{"title":"Identification of MicroRNAs Related to Phytohormone Signal Transduction and Self-incompatibility of Rabbiteye Blueberry Pollen","authors":"Qingrou Yang, Yan Fu, Tingting Zhang, Shu Peng, Jie Deng","doi":"10.21273/jashs05143-21","DOIUrl":"https://doi.org/10.21273/jashs05143-21","url":null,"abstract":"MicroRNAs (miRNAs) related to phytohormone signal transduction and self-incompatibility may play an important role in the xenia effect. However, associated research in this area is still lacking in rabbiteye blueberry (Vaccinium ashei). In this study, we identified miRNAs, predicted their target genes, performed functional enrichment analysis of the target genes, and screened for miRNAs related to phytohormone signaling and self-incompatibility. A total of 491 miRNAs were identified, of which 27 and 67 known miRNAs as well as 274 and 416 new miRNAs were found in the rabbiteye blueberry cultivars Brightwell and Premier, respectively. Compared with ‘Premier’, 31 miRNAs were upregulated and 62 miRNAs were downregulated in ‘Brightwell’. Kyoto Encyclopedia of Genes and Genomes (KEGG) functional enrichment analysis indicated that the 4985 target genes predicted were involved in biosynthesis of amino acids, plant–pathogen interaction, and spliceosome pathways. A total of 10, one, one, five, two, five, and two candidate miRNAs related to auxin, cytokinin, gibberellin, abscisic acid, ethylene, brassinosteroid, and salicylic acid signaling, respectively, in rabbiteye blueberry pollen were identified. Further analysis indicated that novel_miR_49 was a candidate miRNA related to self-incompatibility, and their target gene was maker-VaccDscaff21-snap-gene-21.37. In addition, the KEGG enrichment analysis of the target genes of novel_miR_49 showed that they were involved in the ribosome, aminoacyl-tRNA biosynthesis, and glycosylphosphatidylinositol-anchor biosynthesis pathways. The results revealed that the microRNAs of rabbiteye blueberry pollen regulated to phytohormone signal transduction and self-incompatibility signal transduction based on related to auxin, cytokinin, gibberellin, abscisic acid, ethylene, brassinosteroid, and salicylic acid signaling. Results suggest that more research of the effects of miRNAs on regulation of hormone signal transduction and self-incompatibility is necessary for elucidating the molecular mechanism of the xenia effect.","PeriodicalId":17226,"journal":{"name":"Journal of the American Society for Horticultural Science","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2022-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47308370","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Weighted Gene Coexpression Network Analysis of Candidate Pathways and Genes in Soft Rot Resistance of Amorphophallus 魔芋抗软腐病候选途径及基因的加权基因共表达网络分析
IF 1.9 4区 农林科学
Journal of the American Society for Horticultural Science Pub Date : 2022-11-01 DOI: 10.21273/jashs05251-22
Penghua Gao, Huanyu Wei, Jia-ni Liu, Zebin Chen, Ying Qi, Zhixing Wu, Fei-yan Huang, Lei Yu
{"title":"Weighted Gene Coexpression Network Analysis of Candidate Pathways and Genes in Soft Rot Resistance of Amorphophallus","authors":"Penghua Gao, Huanyu Wei, Jia-ni Liu, Zebin Chen, Ying Qi, Zhixing Wu, Fei-yan Huang, Lei Yu","doi":"10.21273/jashs05251-22","DOIUrl":"https://doi.org/10.21273/jashs05251-22","url":null,"abstract":"Amorphophallus species are one of the main economic crops in the mountainous areas of southwest China. However, soft rot disease (Pectobacterium carotovorum ssp. carotovorum) is devastating for this crop. This study explored the Amorphophallus resistance mechanism against soft rot disease by analyzing transcriptome data using a weighted gene coexpression network analysis. The RNA sequencing of plants infected for 0, 12, 24, and 48 hours produced a total of 52.25 Gb of clean reads. A total of 29,096 genes were divided into 34 modules. Six modules of interest with the highest correlation with the target traits were selected to elucidate the resistance genes and pathways. The selected modules were enriched in the α-linolenic acid metabolism, phenylpropane biosynthesis, plant hormone signal transduction, and plant pathogen interaction pathways. Ultimately, AmBGLU, AmCAML, AmCDPK, AmLOX, and AmRBOHD were identified as genes of interest in the four significantly related metabolic pathways for real-time fluorescence quantitative polymerase chain reaction verification. The determination of salicylic acid (SA) and jasmonic acid (JA) in Amorphophallus muelleri and Amorphophallus konjac that suffered from soft rot disease showed that SA and JA were involved in the A. muelleri and A. konjac defense response against soft rot disease. Methyl jasmonate treatment delayed the onset of A. konjac soft rot disease. This study provides a reference for the interaction between Amorphophallus species and soft rot disease and the breeding of broad-spectrum and specific Amorphophallus cultivars that are resistant to soft rot disease.","PeriodicalId":17226,"journal":{"name":"Journal of the American Society for Horticultural Science","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2022-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45753912","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparative Analysis of Complete Chloroplast Genomes of Gardenia jasminoides and Contribution to the Phylogeny and Adaptive Evolution 栀子叶绿体全基因组的比较分析及其在系统发育和适应进化中的贡献
IF 1.9 4区 农林科学
Journal of the American Society for Horticultural Science Pub Date : 2022-09-01 DOI: 10.21273/jashs05225-22
Shoufu Gong, Bailing Miao, Xiangxiang Dong
{"title":"Comparative Analysis of Complete Chloroplast Genomes of Gardenia jasminoides and Contribution to the Phylogeny and Adaptive Evolution","authors":"Shoufu Gong, Bailing Miao, Xiangxiang Dong","doi":"10.21273/jashs05225-22","DOIUrl":"https://doi.org/10.21273/jashs05225-22","url":null,"abstract":"Gardenia jasminoides, belonging to the Rubiaceae family, is widely distributed and planted in China. It has traditionally been used as an ornamental and medicinal plant in several Asian countries. The rapid development of high-throughput sequencing technology makes it feasible to obtain complete chloroplast (cp) genome sequences and will deepen our understanding of evolution of G. jasminoides. In this study, we sequenced the complete cp genomes of two botanical varieties of G. jasminoides. The complete cp genomes of both botanical varieties of G. jasminoides showed highly conserved structures and the length was 154,954 base pairs (bp) for G. jasminoides var. radicans (GJR) and 155,098 bp for G. jasminoides var. grandiflora (GJG). A total of 132 and 133 genes were identified in GJR and GJG, respectively. The cp genomes of two newly sequenced G. jasminoides were further compared with two published G. jasminoides cp genomes. Multiple repeats and simple sequence repeats (SSRs) were detected among different genotypes of G. jasminoides. The intron sequences of rps16 and rpl16 genes were slightly divergent among four genotypes of G. jasminoides. Phylogenetic analyses based on the complete cp genome sequences showed that G. jasminoides was closely associated with Fosbergia shweliensis, with Coffea as their close relative. Taken together, the complete cp genomes of GJG and GJR provided significant insights and important information that can be used to identify related species and reconstruct their phylogeny.","PeriodicalId":17226,"journal":{"name":"Journal of the American Society for Horticultural Science","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48103005","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic Variation Among 54 Eastern Black Walnut Cultivars for Phenological and Morphological Traits 54个东部黑核桃品种表型和形态性状的遗传变异
IF 1.9 4区 农林科学
Journal of the American Society for Horticultural Science Pub Date : 2022-09-01 DOI: 10.21273/jashs05242-22
Nicholas A. Meier, M. Coggeshall, J. Webber, Elias Bunting, Ronald S. Revord
{"title":"Genetic Variation Among 54 Eastern Black Walnut Cultivars for Phenological and Morphological Traits","authors":"Nicholas A. Meier, M. Coggeshall, J. Webber, Elias Bunting, Ronald S. Revord","doi":"10.21273/jashs05242-22","DOIUrl":"https://doi.org/10.21273/jashs05242-22","url":null,"abstract":"Eastern black walnut (Juglans nigra) is a large tree endemic to the eastern United States and is highly sought after for its timber products and uniquely flavored nuts. The University of Missouri Center for Agroforestry in New Franklin, MO, USA, hosts an eastern black walnut cultivar repository. This collection supports an ongoing breeding program to improve economic performance for nut production (kernel weight, nut quality, precocity, and yield). In 1996, 54 cultivars were grafted and planted in a series of experimental orchards for evaluation. From 2001 until 2015, trees were evaluated for 12 phenological and eight nut quality/yield traits. Economically relevant traits including kernel weight, kernel percentage, and precocity (total nuts produced age 6 to 10 years) ranged from 1.1 to 8.6 g, 5.3% to 39.3%, and 16 to 1522 total nuts per tree, respectively. Kernel percentage was positively correlated with kernel weight (r = 0.51) and precocity (r = 0.38). Precocity was negatively correlated with the first (r = −0.39) and last (r = −0.30) female bloom. Principal component analysis and biplot analyses revealed high levels of variation among the cultivars. The first two components explain 43.4% of the total variation. Nut dimensions (nut length and nut thickness), nut and kernel weight, and kernel percentage are the largest drivers of variation in the collection. Eigenvectors for precocity and kernel percentage load together and are orthogonal to kernel weight, suggesting these three important traits can be improved simultaneously. Also, nut length loads with kernel weight, providing a candidate indirect selection parameter to increase kernel weight. These data inform strategies for crossing scheme design, expectations for multitrait genetic gain, complementary hybridization, and identifying unique recombinants.","PeriodicalId":17226,"journal":{"name":"Journal of the American Society for Horticultural Science","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49425851","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Dry Matter Production and Fruit Sink Strength Affect Fruit Set Ratio of Greenhouse Sweet Pepper 干物质产量和果库强度对温室甜椒结实率的影响
IF 1.9 4区 农林科学
Journal of the American Society for Horticultural Science Pub Date : 2022-09-01 DOI: 10.21273/jashs05228-22
Masaru Homma, T. Watabe, D. Ahn, T. Higashide
{"title":"Dry Matter Production and Fruit Sink Strength Affect Fruit Set Ratio of Greenhouse Sweet Pepper","authors":"Masaru Homma, T. Watabe, D. Ahn, T. Higashide","doi":"10.21273/jashs05228-22","DOIUrl":"https://doi.org/10.21273/jashs05228-22","url":null,"abstract":"We investigated the relationships among the fruit set, dry matter production, and source-to-sink ratio of sweet pepper (Capsicum annuum) plants grown in a greenhouse. We quantified daily fruit sink strength per stem (st) at m days after transplanting (SSTm_st) by modeling the fruit growth curve. The daily total dry matter production (TDMm_st) was calculated and defined as the source strength. During an experiment lasting ≈250 days, the fruit set ratio [number of fruit harvested/number of flowers (FSRm)] decreased significantly with increases in both the weekly average SSTm_st from 9 days before anthesis (DBA) to 13 days after anthesis (DAA) and the weekly average fruit number (FRNm_st) from 9 to 1 DBA. FSRm increased significantly with increases in both the weekly average TDMm_st from 1 to 13 DAA and the weekly average source-to-sink ratio [source strength/fruit sink strength (SSRm_st)] from 5 DBA to 13 DAA. During the whole experimental period, significant positive correlations with FSRm were observed for TDMm_st and SSRm_st, and significant negative correlations with FSRm were observed for SSTm_st and FRNm_st. FSRm increased until approximately the time when the weekly average SSRm_st at 1 to 7 DAA (anthesis to 156°C⋅d−1) ranged from 1.0 to 4.0; then, it showed a saturation curve at SSRm_st values more than 4.0 (R2 = 0.81). These results suggest that it is possible to moderate the fluctuations in sweet pepper yield by monitoring the SSRm_st and the number of fruit set.","PeriodicalId":17226,"journal":{"name":"Journal of the American Society for Horticultural Science","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45858946","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification and Functional Analysis of MicroRNAs and Their Target Genes in Reverse Thermosensitive Genic Male Sterility of Eggplant 茄子逆温性雄性不育microrna及其靶基因的鉴定与功能分析
IF 1.9 4区 农林科学
Journal of the American Society for Horticultural Science Pub Date : 2022-09-01 DOI: 10.21273/jashs05222-22
Bing Li, Jingjing Zhang, Xiurui Gao, Xiuqing Pan, Rong Zhou, Yanrong Wu
{"title":"Identification and Functional Analysis of MicroRNAs and Their Target Genes in Reverse Thermosensitive Genic Male Sterility of Eggplant","authors":"Bing Li, Jingjing Zhang, Xiurui Gao, Xiuqing Pan, Rong Zhou, Yanrong Wu","doi":"10.21273/jashs05222-22","DOIUrl":"https://doi.org/10.21273/jashs05222-22","url":null,"abstract":"Thermosensitive genic male sterile (TGMS) lines are the core of two-line hybrid systems. MicroRNAs (miRNAs) play critical roles in plant growth and development. However, knowledge of regulation of anther development by miRNAs in TGMS eggplant (Solanum melongena) is largely unexplored. To investigate the mechanism underlying miRNA regulation of male sterility, we employed high-throughput small RNA sequencing in anther samples from the reverse TGMS line 05ms and the temperature-insensitive line S63 in eggplant, under high temperature and low temperature conditions. The 05ms line is sterile at low temperature and fertile at high temperature. A total of 166,273,427 raw reads were obtained, 143 known miRNAs from 42 miRNA families and 104 novel miRNAs were detected. Further, six differentially expressed miRNAs (DEMs) were identified, including three known (miR168b-3p, miR397–5p, and miR408) and three novel miRNAs (Novel_116, Novel_119, and Novel_97), which might be related to anther development. Moreover, the six DEMs were validated by quantitative real-time polymerase chain reaction and 892 target genes of which were predicted. Gene Ontology analysis of target genes revealed significant enrichment in the “copper ion binding,” “oxidation-reduction process,” and “oxidoreductase activity” terms. Kyoto Encyclopedia of Genes and Genomes analysis revealed that “plant hormone signal transduction” and “other glycan degradation” were enriched. In addition, we constructed regulatory networks comprising miRNAs, target genes, and important terms/pathways and found the miR397-5p was the most linked miRNA, down-regulated under low temperature. Our findings contribute to understanding of the roles of miRNA during anther development and provide the theoretical foundation for two-line hybrid breeding of eggplant.","PeriodicalId":17226,"journal":{"name":"Journal of the American Society for Horticultural Science","volume":"1 1","pages":""},"PeriodicalIF":1.9,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67935197","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Identification of Dof Transcription Factors in the Genome of Rosa chinensis 中国蔷薇基因组Dof转录因子的鉴定
IF 1.9 4区 农林科学
Journal of the American Society for Horticultural Science Pub Date : 2022-09-01 DOI: 10.21273/jashs05150-21
Jinzhu Zhang, Yu Mo, Shuai Chen, Caihua Li, Qingxi Fang, Jie Dong, Zhongsheng Mou, Zheyu Zhang, D. Che, Qingshan Chen
{"title":"Identification of Dof Transcription Factors in the Genome of Rosa chinensis","authors":"Jinzhu Zhang, Yu Mo, Shuai Chen, Caihua Li, Qingxi Fang, Jie Dong, Zhongsheng Mou, Zheyu Zhang, D. Che, Qingshan Chen","doi":"10.21273/jashs05150-21","DOIUrl":"https://doi.org/10.21273/jashs05150-21","url":null,"abstract":"The DNA binding with one finger (Dof), as an important transcription factor, plays an important role in growth and development, primary and secondary metabolism, stress resistance, and plant hormone signal transduction. However, the identification and analysis of the Dof transcription factor family in Rosa is rarely reported. In this study, 28 Rosa chinensis Dof (RcDof) members were identified, which were located on seven chromosomes. The RcDofs were divided into 12 subfamilies according to evolutionary analysis. Through motif, gene structure, and cis-acting element analyses of the 12 subfamilies, the functions of RcDofs were analyzed and predicted. Furthermore, the Dof members in R. chinensis ‘Old Blush’ and another three species (Arabidopsis thaliana, Oryza sativa, and Zea mays) were systematically analyzed. Twelve subfamilies were found in these four species and the motifs and gene structures of Dof members in each subfamily were similar, which further proves that the RcDofs analysis is accurate. Through an intra- and interspecies collinearity analysis, it was found that the collinearity between A. thaliana and R. chinensis is closer in comparison. Tissue expression analysis of RcDofs was by quantitative reverse-transcription polymerase chain reaction (PCR). Quantitative real-time PCR analysis showed expressions of the RcDofs are tissue specific. The RcDofs had higher expression in leaves, roots, and flowers than other tissues. Taken together, this study provides valuable information for future research on functional exploration of RcDof genes and molecular breeding in Rosa.","PeriodicalId":17226,"journal":{"name":"Journal of the American Society for Horticultural Science","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45931506","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mapping Winterhardiness in Garden Roses 绘制花园玫瑰的抗寒性
IF 1.9 4区 农林科学
Journal of the American Society for Horticultural Science Pub Date : 2022-07-01 DOI: 10.21273/jashs05189-22
Cindy Rouet, J. O’Neill, T. Banks, Karen Tanino, Elodie Derivry, D. Somers, Elizabeth A. Lee
{"title":"Mapping Winterhardiness in Garden Roses","authors":"Cindy Rouet, J. O’Neill, T. Banks, Karen Tanino, Elodie Derivry, D. Somers, Elizabeth A. Lee","doi":"10.21273/jashs05189-22","DOIUrl":"https://doi.org/10.21273/jashs05189-22","url":null,"abstract":"Field winterhardiness is a critical trait in rose cultivars (Rosa ×hybrida) grown in northern climates. Although the molecular basis of cold hardiness has been well documented in model organisms such as Arabidopsis thaliana, little is known about the genetics and mechanisms underlying winterhardiness in roses. This research aims to explore the genetic control of winterhardiness for application in breeding programs using quantitative trail loci (QTL) analysis in two biparental rose populations derived from cold-hardy roses of the Canadian Explorer Series Collection. Field winterhardiness was assessed as a complex trait with winter damage and regrowth recorded in multiyear and multilocation trials in Ontario and Saskatchewan, Canada. In addition, this research explored the relationship between field measurements and electrolyte leakage recorded under artificial conditions. Electrolyte leakage had limited utility for application in rose breeding programs as a substitute for field evaluation, but did enable identification of QTL associated with potential cold hardiness candidate genes. A QTL for electrolyte leakage mapped to a genomic region that harbors a CBF1-like transcription factor. A total of 14 QTLs associated with field winter damage and regrowth were discovered, and they explained between 11% and 37% of the observed phenotypic variance. Two QTL associated with winter damage and regrowth overlapped with a known QTL for black spot (Diplocarpon rosae) disease resistance, Rdr1, in an environment under high disease pressure. Due to the complexity of field winterhardiness and its direct reliance on intertwined factors, such as overall plant health, moisture status, snow cover, and period of prolonged sub-zero temperatures, field trials are the ultimate measurement of field winterhardiness. Transgressive segregation was observed for all traits, and it was most likely due to complementary gene action. Field winter damage and regrowth were highly heritable in single environments, but they were subject to genotype × environment interaction resulting from pest pressure and severe climatic conditions.","PeriodicalId":17226,"journal":{"name":"Journal of the American Society for Horticultural Science","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2022-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43152470","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Segregation of Eastern Filbert Blight Disease Response and Single Nucleotide Polymorphism Markers in Three European–American Interspecific Hybrid Hazelnut Populations 3个欧美种间杂交榛子群体对东部榛叶枯病反应的分离及单核苷酸多态性标记
IF 1.9 4区 农林科学
Journal of the American Society for Horticultural Science Pub Date : 2022-07-01 DOI: 10.21273/jashs05112-22
J. J. Lombardoni, J. Honig, J. Vaiciunas, Ronald S. Revord, T. Molnar
{"title":"Segregation of Eastern Filbert Blight Disease Response and Single Nucleotide Polymorphism Markers in Three European–American Interspecific Hybrid Hazelnut Populations","authors":"J. J. Lombardoni, J. Honig, J. Vaiciunas, Ronald S. Revord, T. Molnar","doi":"10.21273/jashs05112-22","DOIUrl":"https://doi.org/10.21273/jashs05112-22","url":null,"abstract":"The perennial stem canker disease eastern filbert blight (EFB), caused by Anisogramma anomala, is devastating to most trees of European hazelnut (Corylus avellana), as genetic resistance is rare in the species. The pathogen is harbored by the wild American hazelnut (Corylus americana) found throughout much of eastern North America. Wild American hazelnut is generally resistant or tolerant to EFB, and is fully cross compatible with C. avellana, the species grown commercially for its nuts, making it a valuable resource for disease resistance breeding. The objective of this study was to identify quantitative trait loci (QTLs) associated with EFB resistance and tolerance in these two species. Three unrelated EFB-resistant C. americana selections [Oregon State University (OSU) 533.069 from Pennsylvania, OSU 403.040 from Nebraska, and OSU 557.122 from Wisconsin] were crossed with C. avellana ‘Tonda di Giffoni’ (TdG), a cultivar from Italy known to be tolerant of EFB. Their progenies, each containing 124 trees, were exposed to A. anomala through field inoculations and natural spread over 7 years, then each tree was evaluated for cumulative disease response. Results showed that disease response of all three populations exhibited a roughly normal distribution, indicating that resistance/tolerance was under multigenic control. An average of 2869 total markers were used to construct each population’s linkage map following genotyping, which included an average of 121 published simple sequence repeat markers to anchor linkage groups (LGs) to those of previous studies. Linkage maps were constructed for each parent of each population and used to map QTLs associated with EFB response. The subsequent analysis resolved five EFB-related QTLs across the three populations, highlighting three genic regions. Unexpectedly, only one QTL was identified from one of the three resistant C. americana parents, located on LG11 of the map of OSU 403.040, whereas three QTLs were found in a similar region on LG10 across the three maps of TdG, and a fifth QTL was found on LG6 of one TdG map. The lack of strong QTLs identified from the three EFB-resistant C. americana parents suggests that their resistance may be highly quantitative and not resolved within the constraints of this study. In contrast, tolerance from TdG appears to be conferred by a limited number of genes with relatively strong effects. Based on prior mapping work in European and American hazelnut where R genes have been located on LG2, LG6, and LG7, the QTLs associated with resistance/tolerance on LG10 and LG11 represent novel resistance regions. These QTLs present new targets for marker aided breeding, especially when pyramiding EFB resistance genes is a goal.","PeriodicalId":17226,"journal":{"name":"Journal of the American Society for Horticultural Science","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2022-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42550916","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
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