Cell ResearchPub Date : 2025-04-21DOI: 10.1038/s41422-025-01110-x
Xiaobo He, Qiu-Xia Wang, Denghui Wei, Yujie Lin, Xia Zhang, Yuanzhong Wu, Xuexia Qian, Zhihao Lin, Beibei Xiao, Qinxue Wu, Zhen Wang, Fengtao Zhou, Zhihao Wei, Jingxuan Wang, Run Gong, Ruhua Zhang, Qingling Zhang, Ke Ding, Song Gao, Tiebang Kang
{"title":"Lysosomal EGFR acts as a Rheb-GEF independent of its kinase activity to activate mTORC1","authors":"Xiaobo He, Qiu-Xia Wang, Denghui Wei, Yujie Lin, Xia Zhang, Yuanzhong Wu, Xuexia Qian, Zhihao Lin, Beibei Xiao, Qinxue Wu, Zhen Wang, Fengtao Zhou, Zhihao Wei, Jingxuan Wang, Run Gong, Ruhua Zhang, Qingling Zhang, Ke Ding, Song Gao, Tiebang Kang","doi":"10.1038/s41422-025-01110-x","DOIUrl":"https://doi.org/10.1038/s41422-025-01110-x","url":null,"abstract":"<p>Oncogenic mutations in EGFR often result in EGF-independent constitutive activation and aberrant trafficking and are associated with several human malignancies, including non-small cell lung cancer. A major consequence of EGFR mutations is the activation of the mechanistic target of rapamycin complex 1 (mTORC1), which requires EGFR kinase activity and downstream PI3K/AKT signaling, resulting in increased cell proliferation. However, recent studies have elucidated kinase-independent roles of EGFR in cell survival and cancer progression. Here, we report a <i>cis</i> mTORC1 activation function of EGFR that is independent of its kinase activity. Our results reveal that lysosomal localization of EGFR is critical to mTORC1 activation, where EGFR physically binds Rheb, acting as a guanine exchange factor (GEF) for Rheb, with its Glu804 serving as a potential glutamic finger. Genetic knock-in of EGFR-E804K in cells reduces the level of GTP-bound Rheb, and significantly suppresses mTORC1 activation, cell proliferation and tumor growth. Different tyrosine kinase inhibitors exhibit distinct effects on EGFR-induced mTORC1 activation, with afatinib, which additionally blocks EGFR’s GEF activity, causing a much greater suppression of mTORC1 activation and cell growth, and erlotinib, which targets only kinase activity, resulting in only a slight decrease. Moreover, a novel small molecule, BIEGi-1, was designed to target both the Rheb-GEF and kinase activities of EGFR, and shows a strong inhibitory effect on the viability of cells harboring EGFR mutants. These findings unveil a fundamental event in cell growth and suggest a promising strategy against cancers with EGFR mutations.</p>","PeriodicalId":9926,"journal":{"name":"Cell Research","volume":"47 1","pages":""},"PeriodicalIF":44.1,"publicationDate":"2025-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143853179","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cell ResearchPub Date : 2025-04-21DOI: 10.1038/s41422-025-01120-9
Niklas A. Schmacke, Veit Hornung
{"title":"Decoding NLRP3: Phase separation enters the scene","authors":"Niklas A. Schmacke, Veit Hornung","doi":"10.1038/s41422-025-01120-9","DOIUrl":"https://doi.org/10.1038/s41422-025-01120-9","url":null,"abstract":"<p><b>Activation of the innate immune sensor protein NLRP3 leads to the assembly of a multiprotein complex called the inflammasome, causing cell death and inflammation. In a recent paper in</b> <b><i>Cell Research</i></b>, <b>Zou et al. now provide evidence that palmitoylation of NLRP3 promotes its liquid–liquid phase separation, driving inflammasome activation</b>.</p>","PeriodicalId":9926,"journal":{"name":"Cell Research","volume":"30 1","pages":""},"PeriodicalIF":44.1,"publicationDate":"2025-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143853161","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cell ResearchPub Date : 2025-04-21DOI: 10.1038/s41422-025-01109-4
Gang Du, Hao Wu
{"title":"Gasdermin D pores hitch a ride: extracellular vesicles spread pyroptosis","authors":"Gang Du, Hao Wu","doi":"10.1038/s41422-025-01109-4","DOIUrl":"https://doi.org/10.1038/s41422-025-01109-4","url":null,"abstract":"<p><b>Pyroptosis is a highly immunogenic cell death due to the release of damage-associated molecular patterns and pro-inflammatory cytokines such as IL-1β and IL-18. A recent study published in</b> <b><i>Cell</i></b> <b>by Wright and colleagues uncovered a novel mechanism in which extracellular vesicles released from pyroptotic cells serve as carriers of functional gasdermin D pores to propagate pyroptosis to bystander cells, providing valuable insights into the process of bystander cell death and opening up potential therapeutic avenues.</b></p>","PeriodicalId":9926,"journal":{"name":"Cell Research","volume":"6 1","pages":""},"PeriodicalIF":44.1,"publicationDate":"2025-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143853164","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cell ResearchPub Date : 2025-04-21DOI: 10.1038/s41422-025-01121-8
Xianglin Huang, Brian E. Krumm, Bryan L. Roth
{"title":"Orchestrating NTSR1 signaling from the interface","authors":"Xianglin Huang, Brian E. Krumm, Bryan L. Roth","doi":"10.1038/s41422-025-01121-8","DOIUrl":"https://doi.org/10.1038/s41422-025-01121-8","url":null,"abstract":"<p><b>Biased allosteric modulators provide great therapeutic potential by selectively directing signal bias in the presence of endogenous ligand under (patho)physiological conditions. In a recent</b> <b><i>Cell Research</i></b> <b>paper, Sun et al. revealed the structural mechanisms underlying the biased allosteric modulation exerted by SBI-533 directly at the neurotensin receptor 1–β-arrestin1 interface</b>.</p>","PeriodicalId":9926,"journal":{"name":"Cell Research","volume":"268 1","pages":""},"PeriodicalIF":44.1,"publicationDate":"2025-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143853178","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cell ResearchPub Date : 2025-04-21DOI: 10.1038/s41422-025-01118-3
Nikita Sharaev, Jiangfeng Zhao, Wojciech P. Galej
{"title":"Spliceosome-associated quality control","authors":"Nikita Sharaev, Jiangfeng Zhao, Wojciech P. Galej","doi":"10.1038/s41422-025-01118-3","DOIUrl":"https://doi.org/10.1038/s41422-025-01118-3","url":null,"abstract":"<p><b>Intron removal from pre-mRNAs is one of the key steps in gene expression, but how it is achieved with high fidelity remains a subject of active research. Recent structural studies provide new insights into the spliceosome-mediated splice site proofreading mechanism</b>.</p>","PeriodicalId":9926,"journal":{"name":"Cell Research","volume":"49 1","pages":""},"PeriodicalIF":44.1,"publicationDate":"2025-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143853163","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cell ResearchPub Date : 2025-04-16DOI: 10.1038/s41422-025-01113-8
Heng Liu, Shimeng Guo, Antao Dai, Peiyu Xu, Xin Li, Sijie Huang, Xinheng He, Kai Wu, Xinyue Zhang, Dehua Yang, Xin Xie, H Eric Xu
{"title":"Author Correction: Structural and functional evidence that GPR30 is not a direct estrogen receptor.","authors":"Heng Liu, Shimeng Guo, Antao Dai, Peiyu Xu, Xin Li, Sijie Huang, Xinheng He, Kai Wu, Xinyue Zhang, Dehua Yang, Xin Xie, H Eric Xu","doi":"10.1038/s41422-025-01113-8","DOIUrl":"https://doi.org/10.1038/s41422-025-01113-8","url":null,"abstract":"","PeriodicalId":9926,"journal":{"name":"Cell Research","volume":" ","pages":""},"PeriodicalIF":28.1,"publicationDate":"2025-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143976190","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cell ResearchPub Date : 2025-04-16DOI: 10.1038/s41422-025-01114-7
Zhenzhen Li, Qikui Xu, Yan Zhang, Jing Zhong, Tianxiang Zhang, Junchao Xue, Shuxian Liu, Haishan Gao, Z. Z. Zhao Zhang, Jianping Wu, En-Zhi Shen
{"title":"Mechanistic insights into RNA cleavage by human Argonaute2–siRNA complex","authors":"Zhenzhen Li, Qikui Xu, Yan Zhang, Jing Zhong, Tianxiang Zhang, Junchao Xue, Shuxian Liu, Haishan Gao, Z. Z. Zhao Zhang, Jianping Wu, En-Zhi Shen","doi":"10.1038/s41422-025-01114-7","DOIUrl":"https://doi.org/10.1038/s41422-025-01114-7","url":null,"abstract":"<p>In animals, AGO-clade Argonaute proteins utilize small interfering RNAs (siRNAs) as guides to recognize target with complete complementarity, resulting in target RNA cleavage that is a critical step for target silencing. These proteins feature a constricted nucleic acid-binding channel that limits base pairing between the guide and target beyond the seed region. How the AGO–siRNA complexes overcome this structural limitation and achieve efficient target cleavage remains unclear. We performed cryo-electron microscopy of human AGO–siRNA complexes bound to target RNAs of increasing lengths to examine the conformational changes associated with target recognition and cleavage. Initially, conformational transition propagates from the opening of the PAZ domain and extends through a repositioning of the PIWI–L1–N domain toward the binding channel, facilitating the capture of siRNA–target duplex. Subsequent extension of base pairing drives the downward movement of the PIWI–L1–N domain to enable catalytic activation. Finally, further base pairing toward the 3′ end of siRNA destabilizes the PAZ–N domain, resulting in a “uni-lobed” architecture, which might facilitate the multi-turnover action of the AGO–siRNA enzyme complex. In contrast to PIWI-clade Argonautes, the “uni-lobed” structure of the AGO complex makes multiple contacts with the target in the central region of the siRNA–target duplex, positioning it within the catalytic site. Our findings shed light on the stepwise mechanisms by which the AGO–siRNA complex executes target RNA cleavage and offer insights into the distinct operational modalities of AGO and PIWI proteins in achieving such cleavage.</p>","PeriodicalId":9926,"journal":{"name":"Cell Research","volume":"16 1","pages":""},"PeriodicalIF":44.1,"publicationDate":"2025-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143836746","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cell ResearchPub Date : 2025-04-15DOI: 10.1038/s41422-025-01119-2
Michal Schwartz
{"title":"Why resident microglial-like cells were missed in the peripheral nervous system.","authors":"Michal Schwartz","doi":"10.1038/s41422-025-01119-2","DOIUrl":"https://doi.org/10.1038/s41422-025-01119-2","url":null,"abstract":"","PeriodicalId":9926,"journal":{"name":"Cell Research","volume":" ","pages":""},"PeriodicalIF":28.1,"publicationDate":"2025-04-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143970444","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cell ResearchPub Date : 2025-04-14DOI: 10.1038/s41422-025-01115-6
Jonathon A. Ditlev, Julie D. Forman-Kay
{"title":"Beyond peptide targeting sequences: machine learning of cellular condensate localization","authors":"Jonathon A. Ditlev, Julie D. Forman-Kay","doi":"10.1038/s41422-025-01115-6","DOIUrl":"https://doi.org/10.1038/s41422-025-01115-6","url":null,"abstract":"<p><b>Proteins within cells must navigate complex intracellular environments to co-localize with partners and regulate functional cellular organization. In a recent</b><b><i>Science</i></b> <b>paper, Kilgore et al. report the development of ProtGPS, a machine learning-trained predictor of protein localization within biomolecular condensates in cells that can be used to predict the ability of disease-linked mutations to dysregulate protein localization to biomolecular condensates.</b></p>","PeriodicalId":9926,"journal":{"name":"Cell Research","volume":"27 1","pages":""},"PeriodicalIF":44.1,"publicationDate":"2025-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143827374","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}