Advances in applied microbiology最新文献

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2区 生物学
Advances in applied microbiology Pub Date : 2021-01-01 DOI: 10.1016/s0065-2164(21)00029-0
{"title":"Copyright","authors":"","doi":"10.1016/s0065-2164(21)00029-0","DOIUrl":"https://doi.org/10.1016/s0065-2164(21)00029-0","url":null,"abstract":"","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/s0065-2164(21)00029-0","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"55849703","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular engineering to improve lignocellulosic biomass based applications using filamentous fungi. 利用丝状真菌改进木质纤维素生物质应用的分子工程。
2区 生物学
Advances in applied microbiology Pub Date : 2021-01-01 Epub Date: 2020-10-17 DOI: 10.1016/bs.aambs.2020.09.001
Jiali Meng, Miia R Mäkelä, Ronald P de Vries
{"title":"Molecular engineering to improve lignocellulosic biomass based applications using filamentous fungi.","authors":"Jiali Meng,&nbsp;Miia R Mäkelä,&nbsp;Ronald P de Vries","doi":"10.1016/bs.aambs.2020.09.001","DOIUrl":"https://doi.org/10.1016/bs.aambs.2020.09.001","url":null,"abstract":"<p><p>Lignocellulosic biomass is an abundant and renewable resource, and its utilization has become the focus of research and biotechnology applications as a very promising raw material for the production of value-added compounds. Filamentous fungi play an important role in the production of various lignocellulolytic enzymes, while some of them have also been used for the production of important metabolites. However, wild type strains have limited efficiency in enzyme production or metabolic conversion, and therefore many efforts have been made to engineer improved strains. Examples of this are the manipulation of transcriptional regulators and/or promoters of enzyme-encoding genes to increase gene expression, and protein engineering to improve the biochemical characteristics of specific enzymes. This review provides and overview of the applications of filamentous fungi in lignocellulosic biomass based processes and the development and current status of various molecular engineering strategies to improve these processes.</p>","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/bs.aambs.2020.09.001","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38871890","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Biological treatments of mercury and nitrogen oxides in flue gas: biochemical foundations, technological potentials, and recent advances. 烟气中汞和氮氧化物的生物处理:生化基础、技术潜力和最新进展。
2区 生物学
Advances in applied microbiology Pub Date : 2021-01-01 Epub Date: 2021-05-19 DOI: 10.1016/bs.aambs.2021.04.001
Zhenshan Huang, Zaishan Wei, Meiru Tang, Shan Yu, Huaiyong Jiao
{"title":"Biological treatments of mercury and nitrogen oxides in flue gas: biochemical foundations, technological potentials, and recent advances.","authors":"Zhenshan Huang,&nbsp;Zaishan Wei,&nbsp;Meiru Tang,&nbsp;Shan Yu,&nbsp;Huaiyong Jiao","doi":"10.1016/bs.aambs.2021.04.001","DOIUrl":"https://doi.org/10.1016/bs.aambs.2021.04.001","url":null,"abstract":"<p><p>Nitrogen oxides (NO<sub>x</sub>) and mercury (Hg) are commonly found coexistent pollutants in combustion flue gas. Ever-increasing emission of atmospheric Hg and NO<sub>x</sub> has caused considerable environmental risks. Traditional flue gas demercuration and denitration techniques have many socioeconomic, technological and environmental drawbacks. Biotechnologies can be a promising and prospective alternative strategy. This article discusses theoretical foundation (biochemistry and genomic basis) and technical potentials (Hg<sup>0</sup> bio-oxidation coupled to denitrification) of bioremoval of Hg and NO<sub>x</sub> in flue gas and summarized recent experimental and technological advances. Finally, several specific technical perspectives have been put forward to better guide future researches.</p>","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39279241","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis of functional oligosaccharides and their derivatives through cocultivation and cellular NTP regeneration. 通过共培养和细胞NTP再生合成功能性低聚糖及其衍生物。
2区 生物学
Advances in applied microbiology Pub Date : 2021-01-01 Epub Date: 2021-05-03 DOI: 10.1016/bs.aambs.2021.02.002
Jianrong Wu, Ruoyu Yang, Minjie Gao, Hongtao Zhang, Xiaobei Zhan
{"title":"Synthesis of functional oligosaccharides and their derivatives through cocultivation and cellular NTP regeneration.","authors":"Jianrong Wu,&nbsp;Ruoyu Yang,&nbsp;Minjie Gao,&nbsp;Hongtao Zhang,&nbsp;Xiaobei Zhan","doi":"10.1016/bs.aambs.2021.02.002","DOIUrl":"https://doi.org/10.1016/bs.aambs.2021.02.002","url":null,"abstract":"<p><p>Carbohydrates play an important role in the life cycle. Among them, functional oligosaccharides show a complex and diverse structures with unique physiological activities and biological functions. However, different preparation methods directly affect the structure, molecular weight, and other functions of oligosaccharides, as well as their application fields and manufacturing costs. In the preparation of β-1,3-glucan oligosaccharides (OBGs), water insolubility of β-1,3-glucans hampers the hydrolysis efficiency. The synthesis of some functional oligosaccharides requires the consumption of energy substrates, such as ATP, CTP, and uridine triphosphate, for sugar nucleotide synthesis, leading to increased capital costs. A more economical solution to solve energy supply is to adopt microbial cocultivation or cellular nucleoside triphosphate regeneration. This review focused on the sources, preparation methods, biological activities of OBG, and the cultivation methods and applications of microbial cocultivation and fermentation. We also reviewed the preparation methods of other functional oligosaccharides, such as sialylated oligosaccharides, β-nicotinamide mononucleotide, and α-galacto-oligosaccharides.</p>","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/bs.aambs.2021.02.002","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39242243","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Expanding the lysine industry: biotechnological production of l-lysine and its derivatives. 扩大赖氨酸产业:以生物技术生产赖氨酸及其衍生物。
2区 生物学
Advances in applied microbiology Pub Date : 2021-01-01 Epub Date: 2021-03-18 DOI: 10.1016/bs.aambs.2021.02.001
Jiaping Wang, Cong Gao, Xiulai Chen, Liming Liu
{"title":"Expanding the lysine industry: biotechnological production of l-lysine and its derivatives.","authors":"Jiaping Wang,&nbsp;Cong Gao,&nbsp;Xiulai Chen,&nbsp;Liming Liu","doi":"10.1016/bs.aambs.2021.02.001","DOIUrl":"https://doi.org/10.1016/bs.aambs.2021.02.001","url":null,"abstract":"<p><p>l-lysine is an essential amino acid that contains various functional groups including α-amino, ω-amino, and α-carboxyl groups, exhibiting high reaction potential. The derivatization of these functional groups produces a series of value-added chemicals, such as cadaverine, glutarate, and d-lysine, that are widely applied in the chemical synthesis, cosmetics, food, and pharmaceutical industries. Here, we review recent advances in the biotechnological production of l-lysine and its derivatives and expatiate key technological strategies. Furthermore, we also discuss the existing challenges and potential strategies for more efficient production of these chemicals.</p>","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/bs.aambs.2021.02.001","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39241776","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Lipid production by oleaginous yeasts. 产油酵母产脂。
2区 生物学
Advances in applied microbiology Pub Date : 2021-01-01 Epub Date: 2021-05-07 DOI: 10.1016/bs.aambs.2021.03.003
Atrayee Chattopadhyay, Mrinal K Maiti
{"title":"Lipid production by oleaginous yeasts.","authors":"Atrayee Chattopadhyay,&nbsp;Mrinal K Maiti","doi":"10.1016/bs.aambs.2021.03.003","DOIUrl":"https://doi.org/10.1016/bs.aambs.2021.03.003","url":null,"abstract":"<p><p>Microbial lipid production has been studied extensively for years; however, lipid metabolic engineering in many of the extraordinarily high lipid-accumulating yeasts was impeded by inadequate understanding of the metabolic pathways including regulatory mechanisms defining their oleaginicity and the limited genetic tools available. The aim of this review is to highlight the prominent oleaginous yeast genera, emphasizing their oleaginous characteristics, in conjunction with diverse other features such as cheap carbon source utilization, withstanding the effect of inhibitory compounds, commercially favorable fatty acid composition-all supporting their future development as economically viable lipid feedstock. The unique aspects of metabolism attributing to their oleaginicity are accentuated in the pretext of outlining the various strategies successfully implemented to improve the production of lipid and lipid-derived metabolites. A large number of in silico data generated on the lipid accumulation in certain oleaginous yeasts have been carefully curated, as suggestive evidences in line with the exceptional oleaginicity of these organisms. The different genetic elements developed in these yeasts to execute such strategies have been scrupulously inspected, underlining the major types of newly-found and synthetically constructed promoters, transcription terminators, and selection markers. Additionally, there is a plethora of advanced genetic toolboxes and techniques described, which have been successfully used in oleaginous yeasts in the recent years, promoting homologous recombination, genome editing, DNA assembly, and transformation at remarkable efficiencies. They can accelerate and effectively guide the rational designing of system-wide metabolic engineering approaches pinpointing the key targets for developing industrially suitable yeast strains.</p>","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/bs.aambs.2021.03.003","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39279240","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Microbial bioassays in environmental toxicity testing. 环境毒性试验中的微生物生物测定。
2区 生物学
Advances in applied microbiology Pub Date : 2021-01-01 Epub Date: 2021-04-20 DOI: 10.1016/bs.aambs.2021.03.002
Cristina A Viegas
{"title":"Microbial bioassays in environmental toxicity testing.","authors":"Cristina A Viegas","doi":"10.1016/bs.aambs.2021.03.002","DOIUrl":"https://doi.org/10.1016/bs.aambs.2021.03.002","url":null,"abstract":"<p><p>Accidental spills and the misuse of chemicals may lead to current and legacy environmental contamination and pose concerns over possible (eco)toxicological secondary effects and risks toward non-target microbes and higher eukaryotes, including humans, in ecosystems. In the last decades, scientists and regulators have faced requests to thoroughly screen, prioritize and predict the possible deleterious effects of the huge numbers of existing and emerging xenobiotics, wastewaters and environmental samples on biological systems. In this context, it has become necessary to develop and validate (eco)toxicity bioassays based on microorganisms (e.g., bacteria, microalga, yeast, filamentous fungi, protozoa) as test-organisms whose data should be meaningful for environmental (micro)organisms that may be exposed to contaminated environments. These generally simple, fast and cost-effective bioassays may be preliminary and complementary to the more complex and long-term whole-organism animal-based traditional ecotoxicity tests. With the goal of highlighting the potential offered by microbial-based bioassays as non-animal alternatives in (eco)toxicity testing, the present chapter provides an overview of the current state-of-the art in the development and use of microbial toxicity bioassays through the examination of relatively recent examples with a diverse range of toxicity endpoints. It goes into the (eco)toxicological relevance of these bioassays, ranging from the more traditional microalga- and bacterial-based assays already accepted at regulatory level and commercially available to the more innovative microbial transcriptional profiling and gene expression bioassays, including some examples of biosensors.</p>","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/bs.aambs.2021.03.002","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39241777","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
The role of zinc in the pathogenicity of human fungal pathogens. 锌在人类真菌病原体致病性中的作用。
2区 生物学
Advances in applied microbiology Pub Date : 2021-01-01 Epub Date: 2021-10-22 DOI: 10.1016/bs.aambs.2021.09.001
Duncan Wilson
{"title":"The role of zinc in the pathogenicity of human fungal pathogens.","authors":"Duncan Wilson","doi":"10.1016/bs.aambs.2021.09.001","DOIUrl":"https://doi.org/10.1016/bs.aambs.2021.09.001","url":null,"abstract":"<p><p>Fungal pathogens now account for an unprecedented burden on human health. Like all microorganisms, these fungi must successfully forage for essential micronutrients such as zinc in order to proliferate. However, pathogenic microbes face an additional hurdle in securing zinc from their environment: the action of host nutritional immunity which strictly manipulates microbial access to this essential, but also potentially toxic trace metal. This review introduces the relevant pathogenic species and goes on to cover the molecular mechanisms of zinc uptake by human fungal pathogens. Fungi scavenge zinc from their environment via two basic mechanisms: via a family of cellular zinc importers-the ZIP transporters; and via a unique secreted zinc binding protein-the zincophore. However the genetic requirement of these systems for fungal virulence is highly species-specific. As well as zinc scarcity, potential intoxification with this heavy metal can occur and, unlike bacteria, fungi deal with environmental insult this via intraorganellar compartmentalization. Zinc availability also modulates the morphogenic behavior of a subset of pathogenic yeast species. This chapter will cover these different aspects of zinc availability on the physiology of human fungal pathogens with emphasis on the major pathogenic species Candida albicans.</p>","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39595813","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Dermocosmetic applications of microalgal pigments. 微藻色素在皮肤美容中的应用。
2区 生物学
Advances in applied microbiology Pub Date : 2021-01-01 Epub Date: 2021-10-19 DOI: 10.1016/bs.aambs.2021.09.002
André Rolim Baby, Ana Lucía Morocho-Jácome
{"title":"Dermocosmetic applications of microalgal pigments.","authors":"André Rolim Baby,&nbsp;Ana Lucía Morocho-Jácome","doi":"10.1016/bs.aambs.2021.09.002","DOIUrl":"https://doi.org/10.1016/bs.aambs.2021.09.002","url":null,"abstract":"<p><p>Among photosynthetic microorganisms, Cyanobacteria and Microalgae species have been highly studied thank to their high value-added compounds for several industrial applications. Thus, their production is increasing in the last decade to produce raw material for cosmetics. In fact, the daily routine includes the use of cosmetics and sunscreens to protect against the environmental changes, mainly the increment of ultraviolet (UV) radiation rate with a consequent skin damage and premature aging due to this overexposure. As it is well discussed, chemical UV filters are extensively incorporated into sunscreens formulas; however, they can induce allergenic reactions as well. For these reasons, some pigments derived from microalgae, such as astaxanthin, lutein, β-carotene as well as other biocompounds are now well described in the literature as well as biotechnologically manufactured as natural ingredients to be incorporated into skin care products with multifunctional benefits even for sunscreen purposes. Hence, this investigation summarizes the recent studies about the main pigments from photosynthetic microorganisms' biomasses as well as their uses in dermocosmetics with novel attributes, such as anti-aging agents, makeups, skin lightening and whitening, among others.</p>","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39595814","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Contributors 贡献者
2区 生物学
Advances in applied microbiology Pub Date : 2021-01-01 DOI: 10.1016/s0065-2164(21)00043-5
{"title":"Contributors","authors":"","doi":"10.1016/s0065-2164(21)00043-5","DOIUrl":"https://doi.org/10.1016/s0065-2164(21)00043-5","url":null,"abstract":"","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/s0065-2164(21)00043-5","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"55849710","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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