Protoplasma最新文献

{"title":"Dynamics of digestive vacuole differentiation clarified by the observation of living Paramecium bursaria.","authors":"Keiko Obayashi, Yuuki Kodama","doi":"10.1007/s00709-024-01996-1","DOIUrl":"https://doi.org/10.1007/s00709-024-01996-1","url":null,"abstract":"<p><p>Paramecium bursaria is a ciliate species that has a symbiotic relationship with Chlorella spp. This study aimed to elucidate the dynamics of digestive vacuole (DV) differentiation in P. bursaria, using yeast stained with a pH indicator. Previously, DV differentiation in P. bursaria has been classified into eight periods based on fixed-cell observations. However, to understand the behavior and physiology of P. bursaria in its natural state, it is essential to observe living cells. This study presented a novel method using Cornig® Cell-Tak™ to immobilize living P. bursaria cells, which enabled long-term observation of the same cell from the same direction. This technique allowed for real-time observation of DV differentiation, including the relationship between changes in the internal pH of DV and the diameter of DV, yeast budding from the DV membrane by a single cell into the cytoplasm, and separation of a DV containing multiple yeasts into two DVs. This study provides new insights into the dynamic process of DV differentiation in P. bursaria. These findings contribute to a better understanding of the cellular mechanisms underlying the symbiotic relationship between the two organisms and shed light on the complex process of intracellular digestion in ciliates.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142392639","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Chronological events unfolding the vegetative and floral phenology of apical bud in Crocus sativus.","authors":"Anjali Chaudhary, Ruchika Thakur, Tina Roy, Kanchan Yadav, Swati Verma, Kunal Singh","doi":"10.1007/s00709-024-01995-2","DOIUrl":"10.1007/s00709-024-01995-2","url":null,"abstract":"<p><p>Saffron (Crocus sativus L.) is an infertile perennial geophyte considered the most expensive spice in the world. Seasonal fluctuations and climate change have significant impact on the growth, development, and yield of saffron stigma, which is the economically valued part of plant. The stigma being part of the flower, the knowledge of phenotypic transition from dormant apical bud up to flowering is vital, yet, not explored properly. The complexity of flowering in C. sativus further accentuates by the lack of clear demarcation between flowering and non-flowering corms in terms of weight and sizes, as small corms are known to be vegetative only, while large ones produce flower. Therefore, chronological phenotyping on a weekly and quarterly basis of apical shoot and flowering primordia between June and October was carried out to understand the organogenesis sequentially. In large corms, the stamen was the first floral organ to initiate followed by the formation of tepal from the base of the stamen. The plants exhibited both synanthous and hysteranthous flowering. Untargeted metabolome analysis of dormant apical bud just before dormancy break from flowering buds from large corms as well as non-flowering buds from small corms identified the presence of many differentially accumulated metabolites including sphingosine and meglutol. Key metabolites such as phytosphingosine, 3-hydroxy-3-methyl glutaric acid, 3-acetamidopropanal, 6-hydroxykynurenic acid, D-serine, and 1-D-myo-inositol 3-phosphate were also detected having associated with isoprenoid biosynthesis, lignin pathway regulation, and carbohydrate metabolism that participates in flowering. The integration of morphological, histological, and metabolomic data offers a comprehensive view of the flowering process that can be utilised in future biotechnological interventions in C. sativus.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-10-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142372694","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Ubiquitin-like and ubiquitinylated proteins associated with the maternal cell walls of Scenedesmus obliquus 633 as identified by immunochemistry and LC-MS/MS proteomics.","authors":"Justyna Kowalczyk, Kinga Kłodawska, Maria Zych, Jan Burczyk, Przemysław Malec","doi":"10.1007/s00709-024-01994-3","DOIUrl":"https://doi.org/10.1007/s00709-024-01994-3","url":null,"abstract":"<p><p>The cell walls of green algae Scenedesmus obliquus are complex, polymeric structures including an inner cellulose layer surrounded by an algaenan-containing trilaminar sheath. The process of autosporulation leads to the formation of sporangial (maternal) cell walls, which are released into the medium after sporangial autolysis. In this study, a fraction of maternal cell wall material (CWM) was isolated from the stationary phase cultures of Scenedesmus obliquus 633 and subjected to immunofluorescence microscopy using polyclonal anti-ubiquitin antibodies. The water-extracted polypeptide fraction from the maternal cell walls was then analyzed using immunoblotting and LC-MS/MS. An immunoanalysis showed the presence of several peptides reactive with polyclonal anti-ubiquitin serum, with apparent molecular masses of c. 12, 70, 120, 200, and > 250 kDa. Cell wall-associated peptides were identified on the basis of LC-MS/MS spectra across NCBI databases, including the Scenedesmaceae family (58 records), the Chlorophyceae class (37 records), and Chlamydomonas reinhardtii (18 records) corresponding to the signatures of 95 identified proteins. In particular, three signatures identified ubiquitin and ubiquitin-related proteins. In the maternal cell walls, immunoblotting analysis, immunofluorescence microscopy, and LC-MS/MS proteomics collectively demonstrated the presence of ubiquitin-like epitopes, ubiquitin-specific peptide signatures, and several putative ubiquitin conjugates of a higher molecular mass. These results support the presence of ubiquitin-like proteins in the extramembranous compartment of Scenedesmus obliquus 633 and suggest that protein ubiquitination plays a significant role in the formation and functional integrity of the maternal cell walls in green algae.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-10-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142372695","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Investigating the phytochemical profile, biological potentials, morphological, and anatomical characteristics of Cyclotrichium origanifolium (Labill.) Manden. & Scheng. (Lamiaceae) from Turkey.","authors":"Bilge Aydın, Satuk Buğra Alkuyruk, Enes Tekman, Hafize Yuca, Mehmet Karadayı, Yusuf Gülşahin, Ömer Çeçen, Gülnur Ekşi Bona, Betül Demirci, Mehmet Bona, Songül Karakaya","doi":"10.1007/s00709-024-01992-5","DOIUrl":"https://doi.org/10.1007/s00709-024-01992-5","url":null,"abstract":"<p><p>Cyclotrichium origanifolium, a plant widely used in Eastern and Southern Anatolia for culinary purposes, was subject of this study, which aimed to comprehensively evaluate its potential therapeutic applications. This research stands out due to its holistic approach, combining morpho-anatomical studies, chemical, and biological analyses to explore antioxidant, antidiabetic, anticholinesterase, genotoxic, and anti-genotoxic effects of methanolic and aqueous extracts, as well as flowering aerial part essential oil. It is a perennial plant, typically ranging from 10 to 40 cm in height, with a suffrutescent and highly branched growth habit. Essential oils are produced within glandular trichomes. Oil, analyzed via GC-MS/MS, revealed 24 compounds accounting for 96.4% of oil, with isomenthone (52.4%), pulegone (23.4%), and β-pinene (9.5%) as predominant components. These findings are significant as they provide new insights into chemical composition of oils, particularly highlighting pharmacologically active compounds. Methanol extract exhibited superior antioxidant activity, correlated with high phenol and tannin content. Essential oil showed moderate inhibition of α-amylase (49.54%) and mild inhibition of acetylcholinesterase (11.84%) and butyrylcholinesterase (16.93%), suggesting potential in managing oxidative stress and neurodegenerative diseases. Study also conducted biosafety evaluations using Ames/Salmonella and Allium tests, essential for assessing genotoxic and antigenotoxic potential of natural products. Notably, significant antimicrobial effects were identified, particularly against Pseudomonas aeruginosa and Enterococcus faecalis. Comprehensive analysis and discovery of significant bioactivities position this research as a valuable contribution to field, distinguishing it from previous studies on similar species. This study provides a foundational understanding of morpho-anatomical, pharmacological, biological properties of plant, opening avenues for future research.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142366340","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Don't jump the gun quite yet: aiming for the true target in plant neurobiology research.","authors":"Paco Calvo, Vicente Raja, Miguel Segundo-Ortin","doi":"10.1007/s00709-024-01993-4","DOIUrl":"https://doi.org/10.1007/s00709-024-01993-4","url":null,"abstract":"<p><p>In their recent paper, Kingsland and Taiz argue that proponents of plant intelligence and plant neurobiology misuse historical sources to support their claims, suggesting a pattern of bias. They critique the reliance on subjective judgments and the systematic misuse of past literature by notable scientists. This response addresses their criticisms while adhering to Rapoport's rules to foster constructive academic dialogue. We emphasize the importance of evidence-based research and highlight areas of agreement, including the fallacy of appealing to authority and the necessity for more robust empirical evidence. However, we also challenge their selective citation practices and argue that their narrative itself is subject to the same criticisms they levy. By examining recent works and pointing out overlooked rebuttals, we aim to clarify misconceptions and advocate for a more nuanced understanding of plant intelligence research. This dialogue underscores the need for rigorous, respectful scientific discourse to advance the field.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142352669","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Plant “intelligence” and the misuse of historical sources as evidence","authors":"Sharon E. Kingsland, Lincoln Taiz","doi":"10.1007/s00709-024-01988-1","DOIUrl":"https://doi.org/10.1007/s00709-024-01988-1","url":null,"abstract":"<p>Proponents of the concepts of plant intelligence and plant neurobiology often use historical sources as “evidence” and argue that eminent past scientists have supported ideas of plant intelligence, memory, learning, decision-making, agency, and consciousness. Historical sources include writings by Charles Darwin, Julius von Sachs, F. W. Went, K. V. Thimann, Barbara McClintock, and J. B. Lamarck. Advocates of plant neurobiology also argue that the ideas of J. C. Bose, an Indian scientist who is considered an important forerunner of plant neurobiology, were suppressed chiefly because of racism. Plant neurobiology has been criticized on scientific grounds, but there has not been close scrutiny of the use of historical sources as a form of evidence. We provide the first in-depth analysis of how historical sources have been used and misused, and conclude that there is a consistent pattern of distortion of these sources. Distortions include the use of erroneous quotations, alteration of quotations, selective quotations without context, and misinterpretation and exaggeration of historical statements. In the case of Bose, we show that there were legitimate scientific reasons for questioning his interpretations of botanical experiments and argue that this context cannot be ignored in evaluating contemporary responses to Bose. Overall, the common practice by proponents of plant intelligence and plant consciousness of uncritically citing the words of eminent scientists of the past, taken out of their historical context to bolster their arguments, should not be confused with scientific evidence supporting these concepts, even when the quotations, themselves, are accurate.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":"21 1","pages":""},"PeriodicalIF":2.9,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142269545","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Ultrastructural study of pollen and tapetum development in Hydrocleys nymphoides, Alisma plantago-aquatica, and Sagittaria montevidensis (Alismataceae)","authors":"Magali R. Nicolau, Sofía D. Reposi, Marisa G. Bonasora, Gabriela E. Zarlavsky, Beatriz G. Galati, Marina M. Gotelli","doi":"10.1007/s00709-024-01989-0","DOIUrl":"https://doi.org/10.1007/s00709-024-01989-0","url":null,"abstract":"<p>The Alismataceae family, widely distributed across tropical temperate swamps and wetlands, includes 15 genera post-merger with Limnocharitaceae. In Argentina, six genera are represented across three clades. Embryological characters, notably the male gametophyte and anther, are crucial in taxonomy due to their stability against environmental changes. This study aims to analyze the ultrastructure of the tapetum and pollen grain development in three economically and ecologically important species representing each clade: <i>Sagittaria montevidensis</i> (Clade A), <i>Hydrocleys nymphoides</i> (Clade B), and <i>Alisma plantago-aquatica</i> (Clade C). Anthers at different developmental stages were processed according to classic techniques for their observation with bright-field and transmission electron microscopy. The three studied species within the Alismataceae family exhibit similar reproductive characteristics. Seven stages of pollen grain development were identified. The microsporogenesis is successive with a regular meiosis. The ultrastructure of the tapetal cells shows similarities to other species with plasmodial tapetum. During the microspore tetrad stage, there is tapetal hyperactivity and an increase in secretion processes. In the free microspore stage, the tapetal cells lose their walls and increase the amount of rough endoplasmic reticulum forming a network of cisternae that extend into evaginations. Later cells completely invade the anther locule and fuse to form a tapetal plasmodium. No peritapetal membrane with orbicules was observed. Pollen is released at the tricellular stage. The pollen grain wall presents an ectexine with a basal layer, columellae, and tectum with supratectal spines while an endexine is not observed in any of the three species. This research enhances the understanding of tapetal cell interactions with developing pollen grains and contributes to the knowledge of the ultrastructure of plasmodial tapetum. Moreover, these findings highlight evolutionary reproductive patterns in Alismataceae, suggesting the plasmodial tapetum as a synapomorphy for the order.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":"100 1","pages":""},"PeriodicalIF":2.9,"publicationDate":"2024-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142256143","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"The role of sodium nitroprusside (SNP) in alleviating cadmium stress in maize plants","authors":"Alejandro Sandria Díaz, Yasmini da Cunha Cruz, Vinícius Politi Duarte, Evaristo Mauro de Castro, Paulo César Magalhães, Fabricio José Pereira","doi":"10.1007/s00709-024-01987-2","DOIUrl":"https://doi.org/10.1007/s00709-024-01987-2","url":null,"abstract":"<p>Cadmium (Cd) is a heavy metal that is highly toxic to plants and animals and can accumulate in the environment as a result of industrial activities and agricultural application of some types of phosphate fertilizer. This study aimed to assess the role of sodium nitroprusside (SNP), as a source of nitric oxide (NO) in alleviating Cd stress in maize plants. Maize plants were kept in soil saturated with 40%-strength nutrient solution in a greenhouse, and cadmium nitrate, Cd(NO₃)₂, was applied at different concentrations, (0, 10, and 50 µM). Sodium nitroprusside, [Fe(CN)₅NO]·2H₂O, at concentrations of 0.05, 0.1, and 0.2 µM. Growth, leaf gas exchange, and leaf anatomy analyses were performed. The experimental design was completely randomized in a 3 × 3 factorial arrangement with five replicates. The highest concentrations of Cd and SNP reduced the total dry mass and leaf and stem dry mass but increased the allocation of biomass to the roots and stem, but the leaf allocation did not change. The application of Cd and SNP promoted an increase in gas exchange and leaf area, in addition to an increase in leaf tissue thickness and stomatal density. The presence of SNP at low concentrations reduces the toxicity of Cd, but at high concentrations, this compound can generate negative effects and even toxicity in maize plants.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":"9 1","pages":""},"PeriodicalIF":2.9,"publicationDate":"2024-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142179620","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Oil and mucilage idioblasts co-occur in the vegetative organs of Ocotea pulchella (Lauraceae): comparative development, ultrastructure and secretions.","authors":"Karla Bianca de Deus Bento, Yve Canaveze, Silvia Rodrigues Machado","doi":"10.1007/s00709-024-01942-1","DOIUrl":"10.1007/s00709-024-01942-1","url":null,"abstract":"<p><p>This study compares oil and mucilage idioblasts occurring together in the vegetative organs of Ocotea pulchella, a Lauraceae species. Our focus is specifically on the ontogeny and developmental cytology of these secretory cells. Both types of idioblasts originate from solitary cells located in the fundamental meristem, underlying the protodermis. The growth of both types of idioblasts is asynchronous, with the oil idioblasts developing first, but their initiation is restricted to the early stages of organ development. Mucilaginous idioblasts occur exclusively in the palisade parenchyma, while oil idioblasts are scattered throughout the mesophyll, midrib, and petiole of the leaves. The lamellar secretion of mucilage idioblasts is mostly made up of polysaccharides, while the secretion of oil idioblasts is made up of terpenes and lipids. Cupule occurred only in the oil idioblasts, while suberized layers occurred in both types of cells. We found that immature oil idioblasts that are close to each other fuse; mature mucilage idioblasts have labyrinthine walls arranged in a reticulate pattern; the cells close to the oil idioblasts have a pectin protective layer; and the oil idioblasts have a sheath of phenolic cells. In contrast to previous reports, the two types of secretory idioblasts were recognized during the early stages of their development. The results emphasize the importance of combining optical and electron microscopy methods to observe the ontogenetic, histochemical and ultrastructural changes that occur during the development of the secretory idioblasts. This can help us understand how secreting cells store their secretions and how their walls become specialized.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":"877-895"},"PeriodicalIF":2.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140120435","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Implications of cell wall immunocytochemical profiles on the structural and functional traits of root and stem galls induced by Eriosoma lanigerum on Malus domestica.","authors":"Ravena Malheiros Nogueira, Mariana de Sousa Costa Freitas, Edgard Augusto de Toledo Picoli, Rosy Mary Dos Santos Isaias","doi":"10.1007/s00709-024-01939-w","DOIUrl":"10.1007/s00709-024-01939-w","url":null,"abstract":"<p><p>Alterations in cell wall composition imply in new structural and functional traits in gall developmental sites, even when the inducer is a sucking exophytophagous insect with strict feeding sites as the aphid associated to Malus domestica Borkh. This host plant is an economically important, fruit-bearing species, susceptible to gall induction by the sucking aphid Eriosoma lanigerum Hausmann, 1802. Herein, the immunocytochemical detection of arabinogalactan-proteins (AGPs), pectins, and hemicelluloses using monoclonal antibodies was performed in samples of non-galled roots and stems, and of root and stem galls on M. domestica. The dynamics of these cell wall components was discussed under the structural and functional traits of the galls proximal, median, and distal regions, according to the proximity of E. lanigerum colony feeding site. In the proximal region, the epitopes of AGPs and homogalacturonans (HGs) are related to cell growth and divisions, which result in the overproduction of parenchyma cells both in root and stem galls. In the proximal and median regions, the co-occurrence of HGs and arabinans in the cell walls of parenchyma and secondary tissues favors the nutrient flow and water-holding capacity, while the xylogalacturonans and hemicelluloses may function as additional carbohydrate resources to E. lanigerum. The immunocytochemical profile of the cell walls support the feeding activity of E. lanigerum mainly in the gall proximal region. The similarity of the cell wall components of the gall distal region and the non-galled portions, both in roots and stems, relates to the decrease of the cecidogenetic field the more distant the E. lanigerum colony is.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":"911-926"},"PeriodicalIF":2.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140158811","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}