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Exploring the differences in traits and genes between brown cotton and white cotton hybrid offspring (Gossypium hirsutum L.). 探讨褐棉与白棉杂交后代性状及基因的差异。
IF 3.6 3区 生物学
Planta Pub Date : 2025-01-14 DOI: 10.1007/s00425-024-04601-0
Long Chen, Yujiang Zhang, Qinghua Li, Xu Sun, Junshan Gao, Dahui Li, Ning Guo
{"title":"Exploring the differences in traits and genes between brown cotton and white cotton hybrid offspring (Gossypium hirsutum L.).","authors":"Long Chen, Yujiang Zhang, Qinghua Li, Xu Sun, Junshan Gao, Dahui Li, Ning Guo","doi":"10.1007/s00425-024-04601-0","DOIUrl":"10.1007/s00425-024-04601-0","url":null,"abstract":"<p><p>Brown cotton and white cotton are two important raw materials used in the cotton fiber industry. Clarifying the differences in morphology, agronomic traits, and fiber pigments between these varieties can facilitate the implementation of corresponding cultivation and breeding techniques. Therefore, we obtained F<sub>2</sub> generation brown cotton plants through hybridization and compared them with their parents. In terms of agronomic traits, plant morphology and leaf shape were similar, but brown cotton presented more villi on the main stem. The first fruiting branch node was within the range of 4-6 cm, and the first fruiting branch node height was greater than that of TM-1, i.e., between 13.25 cm and 22.79 cm, with no difference compared with that of P26. The plant height was greater than that of the parents, and the number of bolls was essentially the same as that in TM-1 and greater than that in P26. The lint percentage and average fiber length were lower in TM-1 than in P26, and the seed index was greater than that in TM-1 and P26. Pigment measurements revealed that the chlorophyll a content in brown cotton during the boll stage was lower than that in white cotton, and the content of proanthocyanidin in the cotton fibers was greater in brown cotton than in white cotton. At 15 days after pollination, the highest content was 159.8 mg/g. To determine the differences in gene expression levels, we conducted transcriptome sequencing. Gene Ontology (GO) analysis revealed that the differentially expressed genes (DEGs) were enriched in pathways related to the cell wall and enzyme activity, whereas Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed that the DEGs were enriched in flavonoid synthesis pathways. Transcription factor analysis revealed that the expression of the MYB3 transcription factor (Ghir_D07G002110) was higher in brown cotton, and bioinformatics analysis revealed that this gene has regulatory effects on the CHS, CHI1, and F3H genes.</p>","PeriodicalId":20177,"journal":{"name":"Planta","volume":"261 2","pages":"35"},"PeriodicalIF":3.6,"publicationDate":"2025-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142984406","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
De novo root regeneration from leaf explant: a mechanistic review of key factors behind cell fate transition. 叶片外植体的新生根再生:细胞命运转变背后关键因素的机制综述。
IF 3.6 3区 生物学
Planta Pub Date : 2025-01-14 DOI: 10.1007/s00425-025-04616-1
Sumeera Asghar, Faisal Hayat, Zimo Zhao, Zhu Zheng, Nida Ghori, Zhang Lu, Yan Li, Chunli Chen
{"title":"De novo root regeneration from leaf explant: a mechanistic review of key factors behind cell fate transition.","authors":"Sumeera Asghar, Faisal Hayat, Zimo Zhao, Zhu Zheng, Nida Ghori, Zhang Lu, Yan Li, Chunli Chen","doi":"10.1007/s00425-025-04616-1","DOIUrl":"10.1007/s00425-025-04616-1","url":null,"abstract":"<p><strong>Main conclusion: </strong>De novo root regeneration (DNRR) involves activation of special cells after wounding, along with the converter cells, reactive oxygen species, ethylene, and jasmonic acid, also playing key roles. An updated DNRR model is presented here with gene regulatory networks. Root formation after tissue injury is a type of plant regeneration known as de novo root regeneration (DNRR). DNRR system has wide applications in agriculture and tissue culture biotechnology. This review summarizes the recent advancements in the DNRR model for the cellular and molecular framework, targeting leaf explant of Arabidopsis and highlighting differences among direct and indirect pathways. Key findings highlight the presence of special cells in leaf explants after wounding, under different time lapses, through single-cell sequencing of the transcriptional landscape. The possible roles of reactive oxygen species (ROS), ethylene, and jasmonic acid are explored in the early establishment of wounding signals (short/long) for auxin biosynthesis, ultimately leading to adventitious root formation. The synergistic manner of 3rd type of special cells along converter and regeneration-competent cells automatically leads towards cell fate transition for auxin flux in regeneration-competent cells. The signaling mechanisms of these suggested special cells need to be further investigated to understand the DNRR mechanistic story entirely, in addition to root-to-root regeneration and stem-to-root regeneration. Meta-analysis of DNRR is also presented for past and future reference.</p>","PeriodicalId":20177,"journal":{"name":"Planta","volume":"261 2","pages":"33"},"PeriodicalIF":3.6,"publicationDate":"2025-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142979501","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparative effects of Serendipita indica and a mix of arbuscular mycorrhizal fungi on the growth, photosynthetic capacity, and proteomics of Schinus terebinthifolius Raddi. 小茴香菌根真菌与丛枝菌根真菌混合对小茴香生长、光合能力和蛋白质组学的影响。
IF 3.6 3区 生物学
Planta Pub Date : 2025-01-14 DOI: 10.1007/s00425-025-04608-1
Amanda A Bertolazi, Lucas Z Passamani, Sávio B de Souza, Weverton P Rodrigues, Eliemar Campostrini, Vitor B Pinto, Vanildo Silveira, Carlos E de Rezende, Cristina Cruz, Elke J B N Cardoso, Alessandro Coutinho Ramos
{"title":"Comparative effects of Serendipita indica and a mix of arbuscular mycorrhizal fungi on the growth, photosynthetic capacity, and proteomics of Schinus terebinthifolius Raddi.","authors":"Amanda A Bertolazi, Lucas Z Passamani, Sávio B de Souza, Weverton P Rodrigues, Eliemar Campostrini, Vitor B Pinto, Vanildo Silveira, Carlos E de Rezende, Cristina Cruz, Elke J B N Cardoso, Alessandro Coutinho Ramos","doi":"10.1007/s00425-025-04608-1","DOIUrl":"10.1007/s00425-025-04608-1","url":null,"abstract":"<p><strong>Main conclusion: </strong>Both, Serendipita indica and AMF, show promise as sustainable biofertilizers for reforestation, improving nutrient uptake and stress tolerance, despite contrasting effects on photosynthetic capacity and biomass allocation. Reclaiming degraded areas is essential for biodiversity conservation and enhancing ecosystem services enhancement, especially when using native species. This study investigated Schinus terebinthifolius Raddi, a native Brazilian species, and its compatibility with plant growth-promoting microorganisms (PGPM), including an endophytic fungus (Serendipita indica) and a consortium of arbuscular mycorrhizal fungi (AMF), to identify effective strategies for reforestation in nutrient-poor environments. We observed growth stimulation by both PGPMs; however, S. indica primarily enhanced root weight, whereas AMF improved shoot weight. S. indica's positive effects on root systems could be attributed to increased auxin levels and altered root architecture, which are critical for seedling establishment in reforestation programs. In terms of nutritional status, both treatments increased the content of most nutrients, with higher micronutrient contents in the shoots and higher macronutrient content in roots of inoculated plants. Despite AMF's role in enhancing photosynthesis, plants inoculated with these fungi showed reduced photosynthetic capacity traits, possibly due to lower leaf nitrogen content. The proteomic analysis of Schinus terebinthifolius leaf extracts revealed that, despite the upregulation of several proteins associated with the photosynthetic apparatus in response to S. indica treatment, no enhancement in photosynthetic capacity was observed. We also found several proteins related to oxidative stress in plants inoculated with both fungi, indicating a greater tolerance to adverse environmental conditions. These findings underscore the potential of both, S. indica and AMF, as sustainable alternatives to chemical fertilizers in reforestation efforts, enhancing seedling quality and survival in nutrient-poor soils.</p>","PeriodicalId":20177,"journal":{"name":"Planta","volume":"261 2","pages":"34"},"PeriodicalIF":3.6,"publicationDate":"2025-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142979535","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exploring the plant-growth promoting bacterium Herbaspirillum seropedicae as catalyst of microbiome remodeling and metabolic changes in wheat plants. 探索促进植物生长的 Herbaspirillum seropedicae 细菌作为小麦植物微生物组重塑和代谢变化的催化剂。
IF 3.6 3区 生物学
Planta Pub Date : 2025-01-14 DOI: 10.1007/s00425-025-04609-0
Pablo Carril, Carlos Cordeiro, Marta Sousa Silva, Ephrem Ngendahimana, Rogério Tenreiro, Cristina Cruz
{"title":"Exploring the plant-growth promoting bacterium Herbaspirillum seropedicae as catalyst of microbiome remodeling and metabolic changes in wheat plants.","authors":"Pablo Carril, Carlos Cordeiro, Marta Sousa Silva, Ephrem Ngendahimana, Rogério Tenreiro, Cristina Cruz","doi":"10.1007/s00425-025-04609-0","DOIUrl":"10.1007/s00425-025-04609-0","url":null,"abstract":"<p><strong>Main conclusion: </strong>Inoculation with the PGPB Herbaspirillum seropedicae shapes both the structure and putative functions of the wheat microbiome and causes changes in the levels of various plant metabolites described to be involved in plant growth and health. Plant growth promoting bacteria (PGPB) can establish metabolic imprints in their hosts, contributing to the improvement of plant health in different ways. However, while PGPB imprints on plant metabolism have been extensively characterized, much less is known regarding those affecting plant indigenous microbiomes, and hence it remains unknown whether both processes occur simultaneously. In this study, both 16S amplicon and ITS sequencing analyses were carried out to study both the structural as well as the putative functional changes in the seed-borne endophytic microbiome of wheat plants inoculated with the PGPB Herbaspirillum seropedicae strain RAM10. Concomitantly, Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS) analyses were used to investigate the alterations in the root metabolome of PGPB-inoculated plants. PGPB inoculation led to marked differences in the composition of the root microbiome, accompanied by the differential enrichment of microorganisms with putative roles in both plant energy and nitrogen metabolism. In addition, metabolome analyses showed that the levels of 16 metabolites belonging to the phenylpropanoid, terpenoid, and unsaturated fatty acid families were significantly altered in PGPB-inoculated plants. These findings shed light on the interplay between PGPB, the plant and its associated microbiome, indicating that PGPB can act as the driving force mediating long-lasting changes in both the plant metabolome and the plant microbiome.</p>","PeriodicalId":20177,"journal":{"name":"Planta","volume":"261 2","pages":"36"},"PeriodicalIF":3.6,"publicationDate":"2025-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142984411","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complex transcription regulation of acidic chitinase suggests fine-tuning of digestive processes in Drosera binata. 酸性几丁质酶的复杂转录调控表明了果蝇消化过程的微调。
IF 3.6 3区 生物学
Planta Pub Date : 2025-01-12 DOI: 10.1007/s00425-025-04607-2
Veronika Mikitova, Martin Jopcik, Miroslav Rajninec, Jana Libantova
{"title":"Complex transcription regulation of acidic chitinase suggests fine-tuning of digestive processes in Drosera binata.","authors":"Veronika Mikitova, Martin Jopcik, Miroslav Rajninec, Jana Libantova","doi":"10.1007/s00425-025-04607-2","DOIUrl":"10.1007/s00425-025-04607-2","url":null,"abstract":"<p><strong>Main conclusion: </strong>DbChitI-3, Drosera binata's acidic chitinase, peaks at pH 2.5 from 15 °C to 30 °C. Gene expression is stimulated by polysaccharides and suppressed by monosaccharide digestion, implying a feedback loop in its transcriptional regulation. Here, we characterised a novel chitinase gene (DbChitI-3) isolated from the carnivorous plant species Drosera binata with strong homology to other Drosera species' extracellular class I chitinases with a role in digestive processes. The capability to cleave different forms of chitin was tested using recombinantly produced chitinase in Escherichia coli (rDbChitI-3<sup>S-</sup>His) and subsequent purification. The recombinant protein did not cleave chitin powder, the mono-, di- and tri- N-acetyl-D-glucosamine substrates, but cleaved acetic acid-swollen chitin. Fluorometric assay with acetic acid-swollen FITC-chitin as a substrate revealed the maximum enzyme activity at pH 2.5, spanning from 15 °C to 30 °C. Comparing enzymatic parameters with commercial chitinase from Streptomyces griseus showed rDbChitI-3S-His efficiency reaching 64.3% of S. griseus chitinase under optimal conditions. The highest basal expression of DbChitI-3 was detected in leaf blades. In other organs, the expression was either fivefold lower (petioles) or almost nondetectable (stems, roots and flowers). Application of gelatin, chitin, and pachyman resulted in a 3.9-, 4.6- and 5.7-fold increase in the mRNA transcript abundance of DbChitI-3 in leaves. In contrast, monosaccharides and laminarin decreased transcription of the DbChitI-3 gene by at least 70%, 5 h after treatment. The simultaneous application of suppressor and inducer (glucose and pachyman) indicated the predominant effect of the suppressor, implying that sufficient monosaccharide nutrients prioritize absorption processes in D. binata leaves over further digestion of the potential substrate.</p>","PeriodicalId":20177,"journal":{"name":"Planta","volume":"261 2","pages":"32"},"PeriodicalIF":3.6,"publicationDate":"2025-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11725546/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142971924","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The role of signaling systems of plant in responding to key astrophysical factors: increased ionizing radiation, near-null magnetic field and microgravity. 植物信号系统在响应关键天体物理因素中的作用:电离辐射增加、近零磁场和微重力。
IF 3.6 3区 生物学
Planta Pub Date : 2025-01-11 DOI: 10.1007/s00425-025-04610-7
Marina Grinberg, Vladimir Vodeneev
{"title":"The role of signaling systems of plant in responding to key astrophysical factors: increased ionizing radiation, near-null magnetic field and microgravity.","authors":"Marina Grinberg, Vladimir Vodeneev","doi":"10.1007/s00425-025-04610-7","DOIUrl":"10.1007/s00425-025-04610-7","url":null,"abstract":"<p><p>Plants will form the basis of artificial ecosystems in space exploration and the creation of bases on other planets. Astrophysical factors, such as ionizing radiation (IR), magnetic fields (MF) and gravity, can significantly affect the growth and development of plants beyond Earth. However, to date, the ways in which these factors influence plants remain largely unexplored. The review shows that, despite the lack of specialized receptors, plants are able to perceive changes in astrophysical factors. Potential mechanisms for perceiving changes in IR, MF and gravity levels are considered. The main pathway for inducing effects in plants is caused by primary physicochemical reactions and change in the levels of secondary messengers, including ROS and Ca<sup>2+</sup>. The presence of common components, including secondary messengers, in the chain of responses to astrophysical factors determines the complex nature of the response under their combined action. The analysis performed and the proposed hypothesis will help in planning space missions, as well as identifying the most important areas of research in space biology.</p>","PeriodicalId":20177,"journal":{"name":"Planta","volume":"261 2","pages":"31"},"PeriodicalIF":3.6,"publicationDate":"2025-01-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142966313","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
RNAi-mediated downregulation of endogenous 4-coumarate: CoA ligase activity in Sorghum bicolor to alter the lignin content, which augmented the carbohydrate content and growth. rnai介导的下调高粱双色内源4-香豆酸辅酶a连接酶活性,改变木质素含量,提高碳水化合物含量,促进生长。
IF 3.6 3区 生物学
Planta Pub Date : 2025-01-10 DOI: 10.1007/s00425-024-04603-y
Ch Bhanupriya, Satarupa Kar
{"title":"RNAi-mediated downregulation of endogenous 4-coumarate: CoA ligase activity in Sorghum bicolor to alter the lignin content, which augmented the carbohydrate content and growth.","authors":"Ch Bhanupriya, Satarupa Kar","doi":"10.1007/s00425-024-04603-y","DOIUrl":"10.1007/s00425-024-04603-y","url":null,"abstract":"<p><strong>Main conclusion: </strong>This study seeks to improve the biomass extractability of Sorghum bicolor by targeting a critical enzyme, 4CL, through metabolic engineering of the lignin biosynthetic pathway at the post-transcriptional level. Sorghum bicolor L., a significant forage crop, offers a potential source of carbohydrate components for biofuel production. The high lignin content in sorghum stems often impedes the extractability of desired carbohydrate components for industrial use. Thus, the present study aimed to develop an improved variety of S. bicolor with reduced lignin through RNA interference of the endogenous 4-coumarate:CoA ligase (4CL) gene involved in the lignin biosynthetic pathway. The S. bicolor gene was isolated, characterized, and used to construct the RNAi-inducing hpRNA gene-silencing construct. Two independent transgenic sorghum lines were produced by introducing an hpRNA-induced gene-silencing cassette of the Sb4CL through Agrobacterium-mediated transformation in the shoot tips of S. bicolor. This was confirmed by PCR amplification of the hygromycin-resistance gene and Southern hybridization. The Sb4CL gene transcript and its enzymatic activity were found to reduce to varying degrees, as shown by northern hybridization and enzyme activity in the independent transgenic samples. Endogenous Sb4CL downregulation in sorghum stem tissue correlates with reduced lignin content to a maximum range of 25%. The transfer of the transgene in the second generation was also analyzed. Decreased lignin content in the transgenic lines was compensated by increased total cell wall carbohydrates such as cellulose (36.56%) and soluble sugars (59.72%) compared to untransformed plants. The study suggests that suppressing the Sb4CL gene effectively develops better sorghum varieties with lower lignin content. This can be useful for industrial purposes, as the enhanced carbohydrate content and favorable alteration of lignin content can lead to economic benefits.</p>","PeriodicalId":20177,"journal":{"name":"Planta","volume":"261 2","pages":"30"},"PeriodicalIF":3.6,"publicationDate":"2025-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142966311","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterization and functional analysis of type III polyketide synthases in Selaginella moellendorffii.
IF 3.6 3区 生物学
Planta Pub Date : 2025-01-09 DOI: 10.1007/s00425-024-04602-z
Xinyan Liu, Shuai Gao, Aixia Cheng, Hongxiang Lou
{"title":"Characterization and functional analysis of type III polyketide synthases in Selaginella moellendorffii.","authors":"Xinyan Liu, Shuai Gao, Aixia Cheng, Hongxiang Lou","doi":"10.1007/s00425-024-04602-z","DOIUrl":"10.1007/s00425-024-04602-z","url":null,"abstract":"<p><strong>Main conclusion: </strong>The evolutionary conservation of type III polyketide synthases (PKS) in Selaginella has been elucidated, and the critical amino acid residues of the anther-specific chalcone synthase-like enzyme (SmASCL) have been identified. Selaginella species are the oldest known vascular plants and a valuable resource for the study of metabolic evolution in land plants. Polyketides, especially flavonoids and sporopollenin precursors, are essential prerequisites for plant land colonization. Although type III polyketide synthases (PKS) are widely studied in seed plants, the related enzymes in Selaginella remain poorly characterized. Here, eight type III PKSs were identified in the Selaginella moellendorffii genome and classified into three clusters. Two PKSs were selected for further research based on their phylogenetic relationships and protein sequence similarity. Functional studies revealed that they were chalcone synthase (SmCHS) and anther-specific CHS-like enzyme (SmASCL). These enzymes are involved in the biosynthesis of flavonoids and sporopollenin, respectively. Their sequence information and enzymatic activity are similar to the orthologs in other plants. Phylogenetic analysis revealed that the ASCL and CHS enzymes were separated into two clades from the Bryophyta. These results suggest that CHS and ASCL emerged in the first land plants and then remained conserved during plant evolution. To study the structural basis of the enzymatic function of SmASCL, a series of mutants were constructed. The number of condensation reactions catalyzed by the P210L/Y211D and I200V/G201T double mutants exceeds that of the wild-type enzyme. Our study provides insight into the characteristics and functions of type III PKSs in S. moellendorffii. It also offers clues for a deeper understanding of the relationship between active sites and the enzymatic function of ASCLs.</p>","PeriodicalId":20177,"journal":{"name":"Planta","volume":"261 2","pages":"28"},"PeriodicalIF":3.6,"publicationDate":"2025-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143056099","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
ABA-mediated regulation of PME12 influences stomatal density, pore aperture, and heat stress response in Arabidopsis thaliana. aba介导的PME12调控影响拟南芥气孔密度、孔径和热胁迫响应。
IF 3.6 3区 生物学
Planta Pub Date : 2025-01-09 DOI: 10.1007/s00425-025-04606-3
Hui-Chen Wu, Shih-Yu Yu, Sandeep Vivek, Yin-Da Wang, Tsung-Luo Jinn
{"title":"ABA-mediated regulation of PME12 influences stomatal density, pore aperture, and heat stress response in Arabidopsis thaliana.","authors":"Hui-Chen Wu, Shih-Yu Yu, Sandeep Vivek, Yin-Da Wang, Tsung-Luo Jinn","doi":"10.1007/s00425-025-04606-3","DOIUrl":"10.1007/s00425-025-04606-3","url":null,"abstract":"<p><strong>Main conclusion: </strong>PME12-mutated plants displayed altered stomatal characteristics and susceptibility to ABA-induced closure. Despite changes in PME activity, the mutant exhibited enhanced thermotolerance. These findings suggest a complex interplay between pectin methylesterification, ABA response, and stomatal function, contributing to plant adaptation to heat stress. Pectin, an essential component of plant cell walls, is synthesized in the Golgi apparatus and deposited into the cell wall in a highly methylesterified form. The degree and distribution of methylesterification within homogalacturonan (HGA) domains are crucial in determining its functional properties. Pectin methylesterase (PME) catalyzes the demethylesterification of HGA, which is pivotal for adjusting cell wall properties in response to environmental cues. Our investigation of PME12, a type-I pectin methylesterase in Arabidopsis, reveals its role in abscisic acid (ABA)-mediated stomatal regulation during heat stress, with the pme12 mutant showing increased stomatal density, reduced size, and heightened sensitivity to ABA-induced closure. Additionally, pme12 plants exhibited altered PME activities under heat stress but displayed enhanced thermotolerance. Moreover, our study identified SCRM as a transcriptional regulator positively influencing PME12 expression, linking stomatal development with PME12-mediated pectin methylesterification. These findings suggest that PME12-mediated pectin modification plays a role in coordinating ABA responses and influencing stomatal behavior under heat stress conditions.</p>","PeriodicalId":20177,"journal":{"name":"Planta","volume":"261 2","pages":"29"},"PeriodicalIF":3.6,"publicationDate":"2025-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142953116","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
An intron-split microRNA mediates cleavage of the mRNA encoded by low phosphate root in Solanaceae. 内含子分裂microRNA介导茄科植物低磷根编码mRNA的裂解。
IF 3.6 3区 生物学
Planta Pub Date : 2025-01-07 DOI: 10.1007/s00425-024-04596-8
Zahara Medina-Calzada, Runchun Jing, Simon Moxon, Hong Zhu, Ping Xu, Tamas Dalmay
{"title":"An intron-split microRNA mediates cleavage of the mRNA encoded by low phosphate root in Solanaceae.","authors":"Zahara Medina-Calzada, Runchun Jing, Simon Moxon, Hong Zhu, Ping Xu, Tamas Dalmay","doi":"10.1007/s00425-024-04596-8","DOIUrl":"10.1007/s00425-024-04596-8","url":null,"abstract":"<p><strong>Main conclusion: </strong>A microRNA with a non-canonical precursor structure harbours an intron in between its miRNA-5p and miRNA-3p relevant for its biogenesis, is conserved across Solanaceae, and targets the mRNA of low phosphate root. Hundreds of miRNAs have been identified in plants and great advances have been accomplished in the understanding of plant miRNA biogenesis, mechanisms and functions. Still, many miRNAs, particularly those with less conventional features, remain to be discovered. Likewise, additional layers of regulation from miRNA generation to action and turnover are still being revealed. The current study describes a microRNA not previously identified given its unusual intron-split stem-loop structure, that has been previously observed only within the monocot-specific miRNA444 family. It shows its conservation across a branch of Solanales including agriculturally relevant Solanaceae family, where its transcripts had already been predicted in several species within sequence databases. The miRNA is absent in Arabidopsis thaliana but present in Solanum lycopersicum, Nicotiana benthamiana, Petunia axillaris, and Ipomoea nil. It proves that at least two different pri-miRNA variants are produced from this miRNA gene, one spliced and the other one retaining the intron. It demonstrates the dual function of its intron in the miRNA biogenesis. On the one hand, its presence in the pri-miRNA positively influences mature miRNA accumulation, but on the other hand, it needs to be removed from the pri-miRNA for efficient mature miRNA production. Finally, it sets low phosphate root as one of its targets, a protein known to be involved in root growth regulation under phosphate starvation in other plant species.</p>","PeriodicalId":20177,"journal":{"name":"Planta","volume":"261 2","pages":"27"},"PeriodicalIF":3.6,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11706861/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142953118","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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