Physiology and Molecular Biology of Plants最新文献

{"title":"Effect of naringenin based nanocomposites and pure naringenin on cumin (Cuminum cyminum L.) under drought stress","authors":"Hadi Hosseinzadeh Shahmarbiglou, Seyed Mehdi Razavi","doi":"10.1007/s12298-024-01460-7","DOIUrl":"https://doi.org/10.1007/s12298-024-01460-7","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Key message</h3><p>Naringenin based nanocomposite alleviate the harmful effects of drought stress in Cuminum cyminum and enhance carefully the plant tolerance against drought condition with different mechanisms.</p><h3 data-test=\"abstract-sub-heading\">Abstract</h3><p>In the recent years, drought stress is considered as one of the most important stressful conditions for agricultural plants. Reducing the effects of drought on plants is a crucial need nowadays, which calls for innovative methods. Naringenin is one of the most known plant flavonoids with antioxidant properties. In the present work, a naringenin based nanocomposite containing carboxymethylcellulose (CMC) as carrier (CMC-Nar) with an average size of 65 nm were synthesized by coacervation method. In order to investigate the effect of CMC nanocomposites containing naringenin (CMC-Nar) and pure naringenin in modulating the effects of drought stress, cultivation of <i>Cuminum cyminum</i> (varieties: Isfahan and Kashan) was carried out in greenhouse conditions. Drought stress was imposed as 30% of the field capacity. Various physiological, biochemical, and phytochemical assays were performed after treating the plants in drought conditions (30%). The results indicated that treatment of nanocomposites (CMC-Nar) and pure naringenin at drought conditions increased growth and photosynthetic parameters such as germination, shoot and root fresh weight, shoot dry weight, and chlorophyll content of the Cumin. Stress markers such as malondialdehyde, H₂O₂, and electrolyte leakage decreased under the treatment of narinjenin and especially nanocomposites (CMC-Nar) under drought conditions. Moreover, under same condition and treatments, some biochemical parameters including soluble sugar and total protein increased but the activity of antioxidant enzymes and the level of free amino acids has gone down. Compatible Solutes (Proline and glycine betaine) also increased. There was an increase in phytochemical parameters such as total phenols, flavonoids, anthocyanin, and tannins under naringenin and nanocomposites (CMC-Nar) treatment in drought conditions. In general, nanocomposites and pure naringenin reduced the harmful effects of drought stress, and the ameliorating impacts of nanocomposites (CMC-Nar) are more than pure naringenin. According to the results: In most cases, the impact of drought stress was modulated to a greater extent by (CMC-Nar) nanocomposites in the Isfahan variety compared to the Kashan variety. This research tries to propose a new method to reduce the effects of drought stress on <i>Cuminum cyminum</i>.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-05-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141153305","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Different reactions of wheat, maize, and rice plants to putrescine treatment","authors":"Altafur Rahman, Eszter Kulik, I. Majláth, Imran Khan, T. Janda, Magda Pál","doi":"10.1007/s12298-024-01462-5","DOIUrl":"https://doi.org/10.1007/s12298-024-01462-5","url":null,"abstract":"","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-05-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141111867","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Tobacco rattle virus-based virus-induced gene silencing (VIGS) as an aid for functional genomics in Saffron (Crocus sativus L.)","authors":"Diksha Kalia, Joel Jose-Santhi, Firdous Rasool Sheikh, Deepika Singh, Rajesh Kumar Singh","doi":"10.1007/s12298-024-01459-0","DOIUrl":"https://doi.org/10.1007/s12298-024-01459-0","url":null,"abstract":"","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141122373","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"New insights into evolution and functional diversification of Camellia sinensis LRR-RLKs","authors":"Zaibao Zhang, Fan Ye, Kuanru Hu, Tian Luo, Zhiwei Miao","doi":"10.1007/s12298-024-01458-1","DOIUrl":"https://doi.org/10.1007/s12298-024-01458-1","url":null,"abstract":"<p>Leucine-rich repeat receptor-like kinases (LRR-RLKs) represent the largest subgroup of receptor-like kinases (RLKs) in plants. While some LRR-RLK members play a role in regulating various plant growth processes related to morphogenesis, disease resistance, and stress response, the functions of most LRR-RLK genes remain unclear. In this study, we identified 397 LRR-RLK genes from the genome of Camellia sinensis and categorized them into 16 subfamilies. Approximately 62% of CsLRR-RLK genes are situated in regions resulting from segmental duplications, suggesting that the expansion of CsLRR-RLK genes is due to segmental duplications. Analysis of gene expression patterns revealed differential expression of CsLRR-RLK genes across different tissues and in response to stress. Furthermore, we demonstrated that CssEMS1 localizes to the cell membrane and can complement Arabidopsis ems1 mutant. This study is the initial in-depth evolutionary examination of LRR-RLKs in tea and provides a basis for future investigations into their functionality.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-05-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141062027","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Allelic variation and haplotype diversity of Matrilineal (MTL) gene governing in vivo maternal haploid induction in maize","authors":"Suman Dutta, Rashmi Chhabra, Vignesh Muthusamy, Nisrita Gain, Rajkumar Subramani, Konsam Sarika, Elangbam L. Devi, Jayanthi Madhavan, Rajkumar U. Zunjare, Firoz Hossain","doi":"10.1007/s12298-024-01456-3","DOIUrl":"https://doi.org/10.1007/s12298-024-01456-3","url":null,"abstract":"<p>Diverse haploid inducer lines with &gt; 6% of haploid induction rate are now routinely used to develop doubled haploid lines. Though <i>MTL</i> gene regulates haploid induction, its molecular characterization and haplotype analysis in maize and its related species have not been undertaken so far. In the present study, the entire 1812 bp long <i>MTL</i> gene was sequenced among two mutant and eight wild-type inbreds. A 4 bp insertion differentiated the mutant from the wild-type allele. Sequence analysis further revealed 103 polymorphic sites including 38 InDels and 65 SNPs. A total of 15 conserved regions were detected, of which exon-4 was the most conserved. Ten gene-based markers specific to <i>MTL</i> revealed the presence of 40 haplotypes among diverse 48 inbreds of exotic and indigenous origin. It generated 20 alleles with an average of two alleles per locus. The mean polymorphic information content was 0.3247 with mean gene diversity of 0.4135. A total of 15 paralogous sequences of <i>MTL</i> were detected in maize genome with 3–7 exons. Maize <i>MTL</i> proteins of both wild-type and mutant were non-polar in nature, and they possessed four domains. <i>R1-nj</i>-based haploid inducer (HI) lines viz., Pusa-HI-101 and Pusa-HI-102 had an average haploid induction rate of 8.45 ± 0.96% and 10.46 ± 1.15%, respectively. Lines wild-type <i>MTL</i> gene did not generate any haploid. In comparison with 27 orthologues of 21 grass species, maize <i>MTL</i> gene had the closest ancestry with <i>Saccharum spontaneum</i> and Sorghum. The information generated here assumes great significance in understanding the diversity of <i>MTL</i> gene and presence of paralogues and orthologues. This is the first report on haplotype analysis and molecular characterization of <i>MTL</i> gene in maize and related grass species.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-05-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140939287","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Heat shock protein HvHSP16.9 from wild barley enhances tolerance to salt stress","authors":"Haowen Chang, Tiantian Wu, Abdullah Shalmani, Le Xu, Chengdao Li, Wenying Zhang, Rui Pan","doi":"10.1007/s12298-024-01455-4","DOIUrl":"https://doi.org/10.1007/s12298-024-01455-4","url":null,"abstract":"<p>Heat shock proteins (<i>HSP</i>s) are known to play a crucial role in the response of plants to environmental stress, particularly heat stress. Nevertheless, the function of <i>HSP</i>s in salt stress tolerance in plants, especially in barley, remains largely unexplored. Here, we aimed to investigate and compare the salt tolerance mechanisms between wild barley EC_S1 and cultivated barley RGT Planet through a comprehensive analysis of physiological parameters and transcriptomic profiles. Results demonstrated that the number of differentially expressed genes (DEGs) in EC_S1 was significantly higher than in RGT Planet, indicating that wild barley gene regulation is more adaptive to salt stress. KEGG enrichment analysis revealed that DEGs were mainly enriched in the processes of photosynthesis, plant hormone signal transduction, and reactive oxygen species metabolism. Furthermore, the application of weighted gene correlation network analysis (WGCNA) enabled the identification of a set of key genes, including small heat shock protein (<i>sHSP</i>), Calmodulin-like proteins (<i>CML</i>), and protein phosphatases 2C (<i>PP2C</i>). Subsequently, a novel <i>sHSP</i> gene, <i>HvHSP16.9</i> encoding a protein of 16.9 kDa, was cloned from wild barley, and its role in plant response to salt stress was elucidated. In <i>Arabidopsis</i>, overexpression of <i>HvHSP16.9</i> increased the salt tolerance. Meanwhile, barley stripe mosaic virus-induced gene silencing (BSMV-VIGS) of <i>HvHSP16.9</i> significantly reduced the salt tolerance in wild barley. Overall, this study offers a new theoretical framework for comprehending the tolerance and adaptation mechanisms of wild barley under salt stress. It provides valuable insights into the salt tolerance function of <i>HSP</i>, and identifies new candidate genes for enhancing cultivated barley varieties.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-05-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140939526","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Pattern-Triggered Immunity  and Effector-Triggered Immunity: crosstalk and cooperation of PRR and NLR-mediated plant defense pathways during host–pathogen interactions","authors":"Zarka Nabi, Subaya Manzoor, Sajad Un Nabi, Tanveer Ahmad Wani, Humira Gulzar, Mehreena Farooq, Vivak M. Arya, Faheem Shehzad Baloch, Carmen Vlădulescu, Simona Mariana Popescu, Sheikh Mansoor","doi":"10.1007/s12298-024-01452-7","DOIUrl":"https://doi.org/10.1007/s12298-024-01452-7","url":null,"abstract":"<p>The elucidation of the molecular basis underlying plant-pathogen interactions is imperative for the development of sustainable resistance strategies against pathogens. Plants employ a dual-layered immunological detection and response system wherein cell surface-localized Pattern Recognition Receptors (PRRs) and intracellular Nucleotide-Binding Leucine-Rich Repeat Receptors (NLRs) play pivotal roles in initiating downstream signalling cascades in response to pathogen-derived chemicals. Pattern-Triggered Immunity (PTI) is associated with PRRs and is activated by the recognition of conserved molecular structures, known as Pathogen-Associated Molecular Patterns. When PTI proves ineffective due to pathogenic effectors, Effector-Triggered Immunity (ETI) frequently confers resistance. In ETI, host plants utilize NLRs to detect pathogen effectors directly or indirectly, prompting a rapid and more robust defense response. Additionally epigenetic mechanisms are participating in plant immune memory. Recently developed technologies like CRISPR/Cas9 helps in exposing novel prospects in plant pathogen interactions. In this review we explore the fascinating crosstalk and cooperation between PRRs and NLRs. We discuss epigenomic processes and CRISPR/Cas9 regulating immune response in plants and recent findings that shed light on the coordination of these defense layers. Furthermore, we also have discussed the intricate interactions between the salicylic acid and jasmonic acid signalling pathways in plants, offering insights into potential synergistic interactions that would be harnessed for the development of novel and sustainable resistance strategies against diverse group of pathogens.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-05-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140888921","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Structural diversification of fungal cell wall in response to the stress signaling and remodeling during fungal pathogenesis","authors":"Ankita Shree, Surabhi Pal, Praveen Kumar Verma","doi":"10.1007/s12298-024-01453-6","DOIUrl":"https://doi.org/10.1007/s12298-024-01453-6","url":null,"abstract":"<p>Fungi are one of the most diverse organisms found in our surroundings. The heterotrophic lifestyle of fungi and the ever-changing external environmental factors pose numerous challenges for their survival. Despite all adversities, fungi continuously develop new survival strategies to secure nutrition and space from their host. During host–pathogen interaction, filamentous phytopathogens in particular, effectively infect their hosts by maintaining polarised growth at the tips of hyphae. The fungal cell wall, being the prime component of host contact, plays a crucial role in fortifying the intracellular environment against the harsh external environment. Structurally, the fungal cell wall is a highly dynamic yet rigid component, responsible for maintaining cellular morphology. Filamentous pathogens actively maintain their dynamic cell wall to compensate rapid growth on the host. Additionally, they secrete effectors to dampen the sophisticated mechanisms of plant defense and initiate various downstream signaling cascades to repair the damage inflicted by the host. Thus, the fungal cell wall serves as a key modulator of fungal pathogenicity. The fungal cell wall with their associated signaling mechanisms emerge as intriguing targets for host immunity. This review comprehensively examines and summarizes the multifaceted findings of various research groups regarding the dynamics of the cell wall in filamentous fungal pathogens during host invasion.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140888736","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Screening for brown-spot disease and drought stress response and identification of dual-stress responsive genes in rice cultivars of Northeast India","authors":"Debajit Das, Naimisha Chowdhury, Monica Sharma, Remya Suma, Banashree Saikia, Natarajan Velmurugan, Channakeshavaiah Chikkaputtaiah","doi":"10.1007/s12298-024-01447-4","DOIUrl":"https://doi.org/10.1007/s12298-024-01447-4","url":null,"abstract":"<p>Rice cultivation in Northeast India (NEI) primarily relies on rainfed conditions, making it susceptible to severe drought spells that promote the onset of brown spot disease (BSD) caused by <i>Bipolaris oryzae</i>. This study investigates the response of prevalent rice cultivars of NEI to the combined stress of drought and <i>B. oryzae</i> infection. Morphological, physiological, biochemical, and molecular changes were recorded post-stress imposition. Qualitative assessment of reactive oxygen species through DAB (3,3-diaminobenzidine) assay confirmed the elicitation of plant defense responses. Based on drought scoring system and biochemical analyses, the cultivars were categorized into susceptible (Shasharang and Bahadur), moderately susceptible (Gitesh and Ranjit), and moderately tolerant (Kapilee and Mahsuri) groups. Antioxidant enzyme accumulation (catalase, guaiacol peroxidase) and osmolyte (proline) levels increased in all stressed plants, with drought-tolerant cultivars exhibiting higher enzyme activities, indicating stress mitigation efforts. Nevertheless, electrolyte leakage and lipid peroxidation rates increased in all stressed conditions, though variations were observed among stress types. Based on findings from a previous transcriptomic study, a total of nine genes were chosen for quantitative real-time PCR analysis. Among these, <i>OsEBP89</i> appeared as a potential negative regulatory gene, demonstrating substantial upregulation in the susceptible cultivars at both 48 and 72 h post-treatment (hpt). This finding suggests that <i>OsEBP89</i> may play a role in conferring drought-induced susceptibility to BSD in the rice cultivars being investigated.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140888522","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Spatio-temporal expression of polyphenol oxidase unveils the dynamics of L-DOPA accumulation in faba bean (Vicia faba L.)","authors":"Sradhanjali Jena, Rajarshi Sanyal, Danish Md. Jawed, Kaustav Sengupta, Bhubaneswar Pradhan, Subodh Kumar Sinha, Biplab Sarkar, Sandeep Kumar, Sangram K. Lenka, Soumen Naskar, Vijai P. Bhadana, Sujit K. Bishi","doi":"10.1007/s12298-024-01449-2","DOIUrl":"https://doi.org/10.1007/s12298-024-01449-2","url":null,"abstract":"<p>Faba bean (<i>Vicia faba</i> L.) is a winter season grain legume and a rich source of the anti-parkinson drug, L-3,4-dihydroxyphenylalanine (L-DOPA). The biosynthesis of L-DOPA in plants is not uniform and remains largely unexplored. While the hydroxylase activities of Tyrosine Hydroxylase (TH), the Cytochrome P450 (CYP450) class of enzymes, and Polyphenol Oxidases (PPOs) on tyrosine substrate have been reported in plants, only the roles of PPOs in L-DOPA biosynthesis have been recently established in velvet bean (<i>Mucuna pruriens</i>). To understand the differential accumulation of L-DOPA in different tissues of faba bean, profiling of L-Tyrosine, L-DOPA, Tyramine, and Dopamine in different tissues was performed. Differential accumulation of L-DOPA depended on tissue type and maturity. Furthermore, dopamine biosynthesis through L-DOPA from L-Tyr was confirmed in faba bean. The expression analysis of PPOs in leaf and flower tissues revealed the selective induction of only four (<i>HePPO-2</i>, <i>HePPO-7</i>, <i>HePPO-8b</i>, and <i>HePPO-10</i>) out of ten genes encoding different PPOs mined from the faba bean genome. Higher accumulation of L-DOPA in young leaves and flower buds than in mature leaves and flowers was accompanied by significantly higher expression of <i>HePPO-10</i> and <i>HePPO-7</i>, respectively. The role of various transcription factors contributing to such metabolite dynamics was also predicted. Further exploration of this mechanism using a multi-omics approach can provide meaningful insight and pave the way for enhancing L-DOPA content in crops.</p>","PeriodicalId":20148,"journal":{"name":"Physiology and Molecular Biology of Plants","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-04-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140811571","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}