Identification, expression analyses of APETALA1 gene homologs in Bambusa tulda and heterologous validation of BtMADS14 in Arabidopsis thaliana.

IF 3.3 3区 生物学 Q1 PLANT SCIENCES
Mridushree Basak, Sukanya Chakraborty, Sutrisha Kundu, Sonali Dey, Malay Das
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引用次数: 0

Abstract

Bamboos belong to the grass family Poaceae, sub-family Bambusoideae and possess many interesting developmental features including a long vegetative period before flowering. Previously, transcriptome based analyses have identified differentially expressed transcripts in flowering and vegetative tissues to predict gene clusters of functional relevance. In contrast, limited studies were conducted to characterize individual genes to decipher their precise role to induce flowering. This was primarily due to the unavailability of sufficient genomic resources, which has lately been overcome by the release of additional bamboo genomes. In this study, the APETALA1 gene homologs (MADS14, MADS15, MADS18 and MADS20) have been identified from five sequenced bamboo species (Bonia amplexicaulis, Guadua angustifolia, Raddia guianensis, Olyra latifolia, Phyllostachys edulis). In addition, APETALA1 homologs from a tropical bamboo (Bambusa tulda) have been PCR amplified, sequenced and included in the analyses to widen spectrum of sampling. Assessment of their phylogenetic and syntenic relationship with related Poaceae neighbours revealed closer relationship between MADS14 and MADS15 members than MADS18 and MADS20. Transcriptional expression patterns of B. tulda BtMADS14, BtMADS15, BtMADS18 and BtMADS20 in vegetative and floral tissues indicated a possible role of BtMADS14 and BtMADS15 in flower induction and differentiation, while BtMADS18 might be associated with seed development. Total 24 proteins were predicted to interact with the Phyllostachys edulis homolog of BtMADS14 protein and 8 of them were members of the MADS-box family. The p35S::BtMADS14 overexpressing Arabidopsis plants flowered 8-10 days earlier than the wild type plants suggesting its possible involvement in the floral induction of B. tulda.

Supplementary information: The online version contains supplementary material available at 10.1007/s12298-025-01569-3.

竹APETALA1基因同源物的鉴定、表达分析及BtMADS14在拟南芥中的异种验证。
竹属草科竹亚科,具有许多有趣的发育特征,包括开花前的长营养期。以前,基于转录组的分析已经确定了开花和营养组织中差异表达的转录本,以预测功能相关的基因簇。相比之下,对单个基因进行表征以破译其诱导开花的精确作用的研究有限。这主要是由于没有足够的基因组资源,最近通过释放更多的竹子基因组克服了这一问题。本研究从5个已测序的竹种(Bonia amplexicaulis、Guadua angustifolia、Raddia guianensis、Olyra latifolia、Phyllostachys edulis)中鉴定出了APETALA1基因同源基因MADS14、MADS15、MADS18和MADS20。此外,对热带竹(Bambusa tulda)的APETALA1同源物进行了PCR扩增、测序并纳入分析,以扩大采样范围。对其系统发育和同系关系的分析表明,MADS14和MADS15的亲缘关系比MADS18和MADS20的亲缘关系更为密切。蓝藻BtMADS14、BtMADS15、BtMADS18和BtMADS20在营养和花组织中的转录表达模式表明,BtMADS14和BtMADS15可能在花的诱导和分化中起作用,而BtMADS18可能与种子发育有关。预测共24个蛋白与毛竹BtMADS14蛋白同源物相互作用,其中8个为MADS-box家族成员。p35S::BtMADS14过表达的拟南芥植株开花时间比野生型植株早8 ~ 10天,提示其可能参与了B. tulda的诱导。补充信息:在线版本包含补充资料,可在10.1007/s12298-025-01569-3获得。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
7.10
自引率
0.00%
发文量
126
期刊介绍: Founded in 1995, Physiology and Molecular Biology of Plants (PMBP) is a peer reviewed monthly journal co-published by Springer Nature. It contains research and review articles, short communications, commentaries, book reviews etc., in all areas of functional plant biology including, but not limited to plant physiology, biochemistry, molecular genetics, molecular pathology, biophysics, cell and molecular biology, genetics, genomics and bioinformatics. Its integrated and interdisciplinary approach reflects the global growth trajectories in functional plant biology, attracting authors/editors/reviewers from over 98 countries.
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