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Diagnosis of Coccidioidomycosis with the Second-Generation Miravista IgG and IgM Enzyme Immunoassay and the Role of Adding Miravista Coccidioides Antigen Detection to Immunodiagnostic Assays. 用第二代 Miravista IgG 和 IgM 酶免疫测定诊断球孢子菌病,以及在免疫诊断测定中加入 Miravista 球孢子菌抗原检测的作用。
IF 2.7 3区 医学
Medical mycology Pub Date : 2024-07-04 DOI: 10.1093/mmy/myae063
Christelle Kassis, Holbrook Eric, Barros Nicolas, Witt John, Dailey Christopher, Banks Cody, Carlson Kendra, Noveroske Shanna, Murlow Mary, Wheat L Joseph
{"title":"Diagnosis of Coccidioidomycosis with the Second-Generation Miravista IgG and IgM Enzyme Immunoassay and the Role of Adding Miravista Coccidioides Antigen Detection to Immunodiagnostic Assays.","authors":"Christelle Kassis, Holbrook Eric, Barros Nicolas, Witt John, Dailey Christopher, Banks Cody, Carlson Kendra, Noveroske Shanna, Murlow Mary, Wheat L Joseph","doi":"10.1093/mmy/myae063","DOIUrl":"10.1093/mmy/myae063","url":null,"abstract":"<p><p>In the present study, we validate and compare the second-generation Miravista Coccidioides IgG and IgM enzyme immunoassays (EIA) (MiraVista Diagnostics [MVD] Ab EIA) to Meridian Diagnostics Coccidioides IgG and IgM EIA (Meridian Ab EIA), immunodiffusion (ID) and complement fixation (CF). We also evaluated whether the addition of Coccidioides antigen testing to anti-Coccidioides antibody testing increased the sensitivity for the diagnosis of currently active coccidioidomycosis. We retrospectively studied 555 patients evaluated at Valleywise Health Medical Center between January 2013 and May 2017 for whom coccidioidomycosis was suspected and samples were submitted to MVD for testing. Specimens were tested for antigen in the MVD antigen enzyme immunoassay (MVD Ag EIA) and for IgG and IgM antibodies with MVD and Meridian Diagnostics EIAs. ID and CF were obtained from medical records. Sensitivity and specificity were 83.0% and 91.1% or MVD Ab EIA, 69.3% and 99.7% for Meridian Ab EIA, 85.4% and 100% for ID and 65.5% and 100% for CF. Combined MVD antigen and antibody detection by EIA and ID resulted in increased sensitivity in disseminated and pulmonary disease (MVD Ag/MVD Ab: 100%, 88.3%; MVD Ag/Meridian Ab: 98.2%, 78.6%; and MVD Ag/ID: 100%, 91.7%). The detection of antibodies by MVD EIA was more sensitive than Meridian EIA or CF but similar to ID. This study supports the use of antigen testing in immunocompromised patients and those with suspected disseminated disease. Furthermore, the addition of antigen detection by EIA to antibody detection resulted in higher sensitivity of all serological tests.</p>","PeriodicalId":18586,"journal":{"name":"Medical mycology","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-07-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141317688","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Candida auris from the Egyptian cobra: Role of snakes as potential reservoirs. 埃及眼镜蛇身上的念珠菌:蛇作为潜在贮藏体的作用。
IF 2.7 3区 医学
Medical mycology Pub Date : 2024-07-04 DOI: 10.1093/mmy/myae056
Claudia Cafarchia, Jairo A Mendoza-Roldan, Wafa Rhimi, Iniobong C I Ugochukwu, Mara Miglianti, Frederic Beugnet, Letterio Giuffrè, Orazio Romeo, Domenico Otranto
{"title":"Candida auris from the Egyptian cobra: Role of snakes as potential reservoirs.","authors":"Claudia Cafarchia, Jairo A Mendoza-Roldan, Wafa Rhimi, Iniobong C I Ugochukwu, Mara Miglianti, Frederic Beugnet, Letterio Giuffrè, Orazio Romeo, Domenico Otranto","doi":"10.1093/mmy/myae056","DOIUrl":"10.1093/mmy/myae056","url":null,"abstract":"<p><p>Candida auris represents one of the most urgent threats to public health, although its ecology remains largely unknown. Because amphibians and reptiles may present favorable conditions for C. auris colonization, cloacal and blood samples (n = 68), from several snake species, were cultured and molecularly screened for C. auris using molecular amplification of glycosylphosphatidylinositol protein-encoding genes and ribosomal internal transcribed spacer sequencing. Candida auris was isolated from the cloacal swab of one Egyptian cobra (Naja haje legionis) and molecularly identified in its cloaca and blood. The isolation of C. auris from wild animals is herein reported for the first time, thus suggesting the role that these animals could play as reservoirs of this emerging pathogen. The occurrence of C. auris in blood requires further investigation, although the presence of cationic antimicrobial peptides in the plasma of reptiles could play a role in reducing the vitality of the fungus.</p>","PeriodicalId":18586,"journal":{"name":"Medical mycology","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-07-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141180088","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparative efficacies of the three echinocandins for Candida auris candidemia: real world evidence from a tertiary centre in India. 三种棘白菌素治疗念珠菌性阴道炎的疗效比较:来自印度一家三级医疗中心的真实证据
IF 2.7 3区 医学
Medical mycology Pub Date : 2024-07-04 DOI: 10.1093/mmy/myae065
Parikshit S Prayag, Sampada A Patwardhan, Rasika S Joshi, Surabhi Dhupad, Tejashree Rane, Amrita P Prayag
{"title":"Comparative efficacies of the three echinocandins for Candida auris candidemia: real world evidence from a tertiary centre in India.","authors":"Parikshit S Prayag, Sampada A Patwardhan, Rasika S Joshi, Surabhi Dhupad, Tejashree Rane, Amrita P Prayag","doi":"10.1093/mmy/myae065","DOIUrl":"10.1093/mmy/myae065","url":null,"abstract":"<p><p>Though echinocandins are the first line of therapy for C. auris candidemia, there is little clinical data to guide the choice of therapy within this class. This was the first study to compare the three echinocandins in terms of efficacy and outcomes for C. auris candidemia. This was a retrospective analysis of 82 episodes of candidemia caused by C. auris comparing outcomes across the three echinocandins. Majority patients in our study were treated with micafungin. Susceptibility rates were the lowest for caspofungin (35.36% resistance), with no resistance reported for the other two echinocandins. When a susceptible echinocandin was chosen, caspofungin resistance was not a factor significantly associated with mortality. Also, when a susceptible echinocandin was used for therapy, the choice within the class did not affect clinical cure, microbiological cure, or mortality (P > 0.05 for all). Failure to achieve microbiological cure (P = 0.018) and receipt of immune-modulatory therapy (P = 0.01) were significantly associated with increased mortality. Significant cost variation was noted among the echinocandins. Considering the significant cost variation, comparable efficacies can be reassuring for the prescribing physician.</p>","PeriodicalId":18586,"journal":{"name":"Medical mycology","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-07-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11250272/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141450875","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Clinical spectrum, phenotypic and molecular characterization, and antifungal susceptibility of an emerging human pathogen, Acrophialophora, from India. 印度一种新出现的人类病原体 Acrophialophora 的临床谱系、表型和分子特征以及抗真菌敏感性。
IF 2.7 3区 医学
Medical mycology Pub Date : 2024-07-04 DOI: 10.1093/mmy/myae061
Harsimran Kaur, Parakriti Gupta, Haseen Ahmad, Shamanth Adekhandi Shankarnarayan, Pravin Salunke, Deepak Bansal, Anand Shah, Bansidhar Tarai, Kamlesh Patel, Nidhi Singla, Arghadip Samaddar, Neha Jain, Anup Ghosh, Arunaloke Chakrabarti, Shivaprakash M Rudramurthy
{"title":"Clinical spectrum, phenotypic and molecular characterization, and antifungal susceptibility of an emerging human pathogen, Acrophialophora, from India.","authors":"Harsimran Kaur, Parakriti Gupta, Haseen Ahmad, Shamanth Adekhandi Shankarnarayan, Pravin Salunke, Deepak Bansal, Anand Shah, Bansidhar Tarai, Kamlesh Patel, Nidhi Singla, Arghadip Samaddar, Neha Jain, Anup Ghosh, Arunaloke Chakrabarti, Shivaprakash M Rudramurthy","doi":"10.1093/mmy/myae061","DOIUrl":"10.1093/mmy/myae061","url":null,"abstract":"<p><p>Acrophialophora is implicated in superficial and invasive infections, especially in immunosuppressed individuals. The present study was undertaken to provide clinical, microbiological, phylogenetic, and antifungal susceptibility testing (AFST) profile of Acrophialophora isolated from India. All the isolates identified as Acrophialophora species at the National Culture Collection for Pathogenic Fungi, Chandigarh, India were revived. Phenotypic and molecular characterization was performed, followed by temperature studies, scanning electron microscopy (SEM), and AFST. We also performed systematic review of all the cases of Acrophialophora species reported till date. A total of nine isolates identified as Acrophialophora species were identified by molecular method as A. fusispora (n = 8) and A. levis (n = 1), from brain abscess (n = 4), respiratory tract (n = 3), and corneal scraping (n = 2). All patients but two had predisposing factors/co-morbidities. Acrophialophora was identified as mere colonizer in one. Temperature studies and SEM divulged variation between both species. Sequencing of the internal transcribed spacer ribosomal DNA and beta-tubulin loci could distinguish species, while the LSU ribosomal DNA locus could not. AFST showed the lowest minimum inhibitory concentrations (MICs) for triazoles and the highest for echinocandins. Systematic literature review revealed 16 cases (11 studies), with ocular infections, pulmonary and central nervous system infections, and A. fusispora was common species. All the patients except three responded well. High MICs were noted for fluconazole, micafungin, and caspofungin. This is the first study delineating clinical, phenotypic, and genotypic characteristics of Acrophialophora species from India. The study highlights microscopic differences between both species and emphasizes the role of molecular methods in precise identification. Triazoles appear to be the most effective antifungals for managing patients.</p>","PeriodicalId":18586,"journal":{"name":"Medical mycology","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-07-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141301064","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Management of disseminated histoplasmosis in a high-complexity clinic in Cali, Colombia. 哥伦比亚卡利一家高难度诊所对播散性组织胞浆菌病的管理。
IF 2.7 3区 医学
Medical mycology Pub Date : 2024-07-04 DOI: 10.1093/mmy/myae058
Natalia Ramos-Ospina, Indira Carolina Lambertinez-Álvarez, Leidy Johanna Hurtado-Bermúdez, Jenny Patricia Muñoz-Lombo, Juan Diego Vélez-Londoño, Jorge Andrés Valencia-Montagut, Pablo Andrés Moncada-Vallejo
{"title":"Management of disseminated histoplasmosis in a high-complexity clinic in Cali, Colombia.","authors":"Natalia Ramos-Ospina, Indira Carolina Lambertinez-Álvarez, Leidy Johanna Hurtado-Bermúdez, Jenny Patricia Muñoz-Lombo, Juan Diego Vélez-Londoño, Jorge Andrés Valencia-Montagut, Pablo Andrés Moncada-Vallejo","doi":"10.1093/mmy/myae058","DOIUrl":"10.1093/mmy/myae058","url":null,"abstract":"<p><p>Histoplasmosis presents a substantial clinical challenge globally, with a particular prevalence in South America, especially among patients with concurrent Human Immunodeficiency Virus (HIV) infection. Despite itraconazole's established efficacy, investigating alternative therapeutic approaches remains imperative. This is the largest study in our region to date, assessing the effectiveness of the less explored posaconazole treatment. This observational study, conducted at Fundación Valle del Lili (FVL) from 2016 to 2022, encompassed adults with disseminated histoplasmosis. Patients (n = 31) were treated with liposomal amphotericin B as an initial treatment, followed by consolidation treatment with posaconazole or itraconazole. Patients with single-organ cases, those lacking microbiological diagnosis, those who received initial treatment with antifungals other than liposomal Amphotericin B and those with < 6 months follow-up were excluded (Figure 1). Analyses considered population characteristics, treatments, and outcomes. Patients (average age: 45.6; 58.1% female) had common comorbidities (HIV 38.7%, solid organ transplantation 29% and oncologic disease 12.9%). Lungs (48.4%) and lymph nodes (16.1%) were commonly affected. Biopsy (64.5%) was the primary diagnostic method. Initial treatment with liposomal amphotericin B (100%) was given for 14 days on average. Follow-up indicated 71% completion with 19.4% requiring treatment modifications. Notably, 70.9% completed a posaconazole consolidation regimen over 350 days on average. Drug interactions during consolidation (80.6%) were common. No relapses occurred, and three deaths unrelated to histoplasmosis were reported. Traditionally, itraconazole has been the prevalent initial treatment; however, in our cohort, 55.9% of patients received posaconazole as the primary option. Encouragingly, posaconazole showed favorable tolerance and infection resolution, suggesting its potential as an effective and well-tolerated alternative for consolidation treatment. This finding prompts further exploration of posaconazole, potentially leading to more effective patient care and better outcomes.</p>","PeriodicalId":18586,"journal":{"name":"Medical mycology","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-07-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141162289","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Candida albicans-A systematic review to inform the World Health Organization Fungal Priority Pathogens List. 白色念珠菌--为世界卫生组织真菌优先病原体清单提供信息的系统性回顾。
IF 2.7 3区 医学
Medical mycology Pub Date : 2024-06-27 DOI: 10.1093/mmy/myae045
Sarika Parambath, Aiken Dao, Hannah Yejin Kim, Shukry Zawahir, Ana-Alastruey Izquierdo, Evelina Tacconelli, Nelesh Govender, Rita Oladele, Arnaldo Colombo, Tania Sorrell, Pilar Ramon-Pardo, Terence Fusire, Valeria Gigante, Hatim Sati, C Orla Morrissey, Jan-Willem Alffenaar, Justin Beardsley
{"title":"Candida albicans-A systematic review to inform the World Health Organization Fungal Priority Pathogens List.","authors":"Sarika Parambath, Aiken Dao, Hannah Yejin Kim, Shukry Zawahir, Ana-Alastruey Izquierdo, Evelina Tacconelli, Nelesh Govender, Rita Oladele, Arnaldo Colombo, Tania Sorrell, Pilar Ramon-Pardo, Terence Fusire, Valeria Gigante, Hatim Sati, C Orla Morrissey, Jan-Willem Alffenaar, Justin Beardsley","doi":"10.1093/mmy/myae045","DOIUrl":"10.1093/mmy/myae045","url":null,"abstract":"<p><p>Candida albicans is a common fungal pathogen and amongst the leading causes of invasive candidiasis globally. This systematic review examines the characteristics and global impact of invasive infections caused by C. albicans. We searched on PubMed and Web of Science for studies reporting on criteria such as mortality, morbidity, drug resistance, preventability, yearly incidence, and distribution/emergence during the period from 2016 to 2021. Our findings indicate that C. albicans is the most common Candida species causing invasive disease and that standard infection control measures are the primary means of prevention. However, we found high rates of mortality associated with infections caused by C. albicans. Furthermore, there is a lack of data on complications and sequelae. Resistance to commonly used antifungals remains rare. Although, whilst generally susceptible to azoles, we found some evidence of increasing resistance, particularly in middle-income settings-notably, data from low-income settings were limited. Candida albicans remains susceptible to echinocandins, amphotericin B, and flucytosine. We observed evidence of a decreasing proportion of infections caused by C. albicans relative to other Candida species, although detailed epidemiological studies are needed to confirm this trend. More robust data on attributable mortality, complications, and sequelae are needed to understand the full extent of the impact of invasive C. albicans infections.</p>","PeriodicalId":18586,"journal":{"name":"Medical mycology","volume":"62 6","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-06-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11210619/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141469416","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Eumycetoma causative agents: A systematic review to inform the World Health Organization priority list of fungal pathogens. 真菌瘤致病菌:为世界卫生组织真菌病原体优先列表提供信息的系统回顾。
IF 2.7 3区 医学
Medical mycology Pub Date : 2024-06-27 DOI: 10.1093/mmy/myae044
Julia E Clark, Hannah Yejin Kim, Wendy W J van de Sande, Brendan McMullan, Paul Verweij, Ana Alastruey-Izquierdo, Arunaloke Chakrabarti, Thomas S Harrison, Felix Bongomin, Roderick J Hay, Rita Oladele, Jutta Heim, Peter Beyer, Marcelo Galas, Siswanto Siswanto, Daniel Argaw Dagne, Felipe Roitberg, Valeria Gigante, Justin Beardsley, Hatim Sati, Jan-Willem Alffenaar, C Orla Morrissey
{"title":"Eumycetoma causative agents: A systematic review to inform the World Health Organization priority list of fungal pathogens.","authors":"Julia E Clark, Hannah Yejin Kim, Wendy W J van de Sande, Brendan McMullan, Paul Verweij, Ana Alastruey-Izquierdo, Arunaloke Chakrabarti, Thomas S Harrison, Felix Bongomin, Roderick J Hay, Rita Oladele, Jutta Heim, Peter Beyer, Marcelo Galas, Siswanto Siswanto, Daniel Argaw Dagne, Felipe Roitberg, Valeria Gigante, Justin Beardsley, Hatim Sati, Jan-Willem Alffenaar, C Orla Morrissey","doi":"10.1093/mmy/myae044","DOIUrl":"10.1093/mmy/myae044","url":null,"abstract":"<p><p>The World Health Organization, in response to the growing burden of fungal disease, established a process to develop a fungal priority pathogens list. This systematic review aimed to evaluate the epidemiology and impact of eumycetoma. PubMed and Web of Science were searched to identify studies published between 1 January 2011 and 19 February 2021. Studies reporting on mortality, inpatient care, complications and sequelae, antifungal susceptibility, risk factors, preventability, annual incidence, global distribution, and emergence during the study time frames were selected. Overall, 14 studies were eligible for inclusion. Morbidity was frequent with moderate to severe impairment of quality of life in 60.3%, amputation in up to 38.5%, and recurrent or long-term disease in 31.8%-73.5% of patients. Potential risk factors included male gender (56.6%-79.6%), younger age (11-30 years; 64%), and farming occupation (62.1%-69.7%). Mycetoma was predominantly reported in Sudan, particularly in central Sudan (37%-76.6% of cases). An annual incidence of 0.1/100 000 persons and 0.32/100  000 persons/decade was reported in the Philippines and Uganda, respectively. In Uganda, a decline in incidence from 3.37 to 0.32/100  000 persons between two consecutive 10-year periods (2000-2009 and 2010-2019) was detected. A community-based, multi-pronged prevention programme was associated with a reduction in amputation rates from 62.8% to 11.9%. With the pre-specified criteria, no studies of antifungal drug susceptibility, mortality, and hospital lengths of stay were identified. Future research should include larger cohort studies, greater drug susceptibility testing, and global surveillance to develop evidence-based treatment guidelines and to determine more accurately the incidence and trends over time.</p>","PeriodicalId":18586,"journal":{"name":"Medical mycology","volume":"62 6","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-06-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11210612/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141469422","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pichia kudriavzevii (Candida krusei): A systematic review to inform the World Health Organisation priority list of fungal pathogens. Pichia kudriavzevii (Candida krusei):为世界卫生组织真菌病原体优先列表提供信息的系统回顾。
IF 2.7 3区 医学
Medical mycology Pub Date : 2024-06-27 DOI: 10.1093/mmy/myad132
Thi Anh Nguyen, Hannah Yejin Kim, Sophie Stocker, Sarah Kidd, Ana Alastruey-Izquierdo, Aiken Dao, Thomas Harrison, Retno Wahyuningsih, Volker Rickerts, John Perfect, David W Denning, Marcio Nucci, Alessandro Cassini, Justin Beardsley, Valeria Gigante, Hatim Sati, C Orla Morrissey, Jan-Willem Alffenaar
{"title":"Pichia kudriavzevii (Candida krusei): A systematic review to inform the World Health Organisation priority list of fungal pathogens.","authors":"Thi Anh Nguyen, Hannah Yejin Kim, Sophie Stocker, Sarah Kidd, Ana Alastruey-Izquierdo, Aiken Dao, Thomas Harrison, Retno Wahyuningsih, Volker Rickerts, John Perfect, David W Denning, Marcio Nucci, Alessandro Cassini, Justin Beardsley, Valeria Gigante, Hatim Sati, C Orla Morrissey, Jan-Willem Alffenaar","doi":"10.1093/mmy/myad132","DOIUrl":"10.1093/mmy/myad132","url":null,"abstract":"<p><p>In response to the growing global threat of fungal infections, in 2020 the World Health Organisation (WHO) established an Expert Group to identify priority fungi and develop the first WHO fungal priority pathogen list (FPPL). The aim of this systematic review was to evaluate the features and global impact of invasive infections caused by Pichia kudriavzevii (formerly known as Candida krusei). PubMed and Web of Science were used to identify studies published between 1 January 2011 and 18 February 2021 reporting on the criteria of mortality, morbidity (defined as hospitalisation and length of stay), drug resistance, preventability, yearly incidence, and distribution/emergence. Overall, 33 studies were evaluated. Mortality rates of up to 67% in adults were reported. Despite the intrinsic resistance of P. kudriavzevii to fluconazole with decreased susceptibility to amphotericin B, resistance (or non-wild-type rate) to other azoles and echinocandins was low, ranging between 0 and 5%. Risk factors for developing P. kudriavzevii infections included low birth weight, prior use of antibiotics/antifungals, and an underlying diagnosis of gastrointestinal disease or cancer. The incidence of infections caused by P. kudriavzevii is generally low (∼5% of all Candida-like blood isolates) and stable over the 10-year timeframe, although additional surveillance data are needed. Strategies targeting the identified risk factors for developing P. kudriavzevii infections should be developed and tested for effectiveness and feasibility of implementation. Studies presenting data on epidemiology and susceptibility of P. kudriavzevii were scarce, especially in low- and middle-income countries (LMICs). Thus, global surveillance systems are required to monitor the incidence, susceptibility, and morbidity of P. kudriavzevii invasive infections to inform diagnosis and treatment. Timely species-level identification and susceptibility testing should be conducted to reduce the high mortality and limit the spread of P. kudriavzevii in healthcare facilities.</p>","PeriodicalId":18586,"journal":{"name":"Medical mycology","volume":"62 6","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-06-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11210618/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141469463","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Candida parapsilosis: A systematic review to inform the World Health Organization fungal priority pathogens list. 副丝状念珠菌:为世界卫生组织真菌优先病原体清单提供信息的系统综述。
IF 2.7 3区 医学
Medical mycology Pub Date : 2024-06-27 DOI: 10.1093/mmy/myad131
Mrudhula Asogan, Hannah Yejin Kim, Sarah Kidd, Ana Alastruey-Izquierdo, Nelesh P Govender, Aiken Dao, Jong-Hee Shin, Jutta Heim, Nathan Paul Ford, Valeria Gigante, Hatim Sati, C Orla Morrissey, Jan-Willem Alffenaar, Justin Beardsley
{"title":"Candida parapsilosis: A systematic review to inform the World Health Organization fungal priority pathogens list.","authors":"Mrudhula Asogan, Hannah Yejin Kim, Sarah Kidd, Ana Alastruey-Izquierdo, Nelesh P Govender, Aiken Dao, Jong-Hee Shin, Jutta Heim, Nathan Paul Ford, Valeria Gigante, Hatim Sati, C Orla Morrissey, Jan-Willem Alffenaar, Justin Beardsley","doi":"10.1093/mmy/myad131","DOIUrl":"10.1093/mmy/myad131","url":null,"abstract":"<p><p>Candida parapsilosis is globally distributed and recognised for causing an increasing proportion of invasive Candida infections. It is associated with high crude mortality in all age groups. It has been particularly associated with nosocomial outbreaks, particularly in association with the use of invasive medical devices such as central venous catheters. Candida parapsilosis is one of the pathogens considered in the WHO priority pathogens list, and this review was conducted to inform the ranking of the pathogen in the list. In this systematic review, we searched PubMed and Web of Science to find studies between 2011 and 2021 reporting on the following criteria for C. parapsilosis infections: mortality, morbidity (hospitalisation and disability), drug resistance, preventability, yearly incidence, and distribution/emergence. We identified 336 potentially relevant papers, of which 51 were included in the analyses. The included studies confirmed high mortality rates, ranging from 17.5% to 46.8%. Data on disability and sequelae were sparse. Many reports highlighted concerns with azole resistance, with resistance rates of >10% described in some regions. Annual incidence rates were relatively poorly described, although there was clear evidence that the proportion of candidaemia cases caused by C. parapsilosis increased over time. While this review summarises current data on C.parapsilosis, there remains an urgent need for ongoing research and surveillance to fully understand and manage this increasingly important pathogen.</p>","PeriodicalId":18586,"journal":{"name":"Medical mycology","volume":"62 6","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-06-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11210616/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141469419","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Aspergillus fumigatus-a systematic review to inform the World Health Organization priority list of fungal pathogens. 烟曲霉--为世界卫生组织真菌病原体优先列表提供信息的系统综述。
IF 2.7 3区 医学
Medical mycology Pub Date : 2024-06-27 DOI: 10.1093/mmy/myad129
C Orla Morrissey, Hannah Y Kim, Tra-My N Duong, Eric Moran, Ana Alastruey-Izquierdo, David W Denning, John R Perfect, Marcio Nucci, Arunaloke Chakrabarti, Volker Rickerts, Tom M Chiller, Retno Wahyuningsih, Raph L Hamers, Alessandro Cassini, Valeria Gigante, Hatim Sati, Jan-Willem Alffenaar, Justin Beardsley
{"title":"Aspergillus fumigatus-a systematic review to inform the World Health Organization priority list of fungal pathogens.","authors":"C Orla Morrissey, Hannah Y Kim, Tra-My N Duong, Eric Moran, Ana Alastruey-Izquierdo, David W Denning, John R Perfect, Marcio Nucci, Arunaloke Chakrabarti, Volker Rickerts, Tom M Chiller, Retno Wahyuningsih, Raph L Hamers, Alessandro Cassini, Valeria Gigante, Hatim Sati, Jan-Willem Alffenaar, Justin Beardsley","doi":"10.1093/mmy/myad129","DOIUrl":"10.1093/mmy/myad129","url":null,"abstract":"<p><p>Recognizing the growing global burden of fungal infections, the World Health Organization established a process to develop a priority list of fungal pathogens (FPPL). In this systematic review, we aimed to evaluate the epidemiology and impact of invasive infections caused by Aspergillus fumigatus to inform the first FPPL. The pre-specified criteria of mortality, inpatient care, complications and sequelae, antifungal susceptibility, risk factors, preventability, annual incidence, global distribution, and emergence were used to search for relevant articles between 1 January 2016 and 10 June 2021. Overall, 49 studies were eligible for inclusion. Azole antifungal susceptibility varied according to geographical regions. Voriconazole susceptibility rates of 22.2% were reported from the Netherlands, whereas in Brazil, Korea, India, China, and the UK, voriconazole susceptibility rates were 76%, 94.7%, 96.9%, 98.6%, and 99.7%, respectively. Cross-resistance was common with 85%, 92.8%, and 100% of voriconazole-resistant A. fumigatus isolates also resistant to itraconazole, posaconazole, and isavuconazole, respectively. The incidence of invasive aspergillosis (IA) in patients with acute leukemia was estimated at 5.84/100 patients. Six-week mortality rates in IA cases ranged from 31% to 36%. Azole resistance and hematological malignancy were poor prognostic factors. Twelve-week mortality rates were significantly higher in voriconazole-resistant than in voriconazole-susceptible IA cases (12/22 [54.5%] vs. 27/88 [30.7%]; P = .035), and hematology patients with IA had significantly higher mortality rates compared with solid-malignancy cases who had IA (65/217 [30%] vs. 14/78 [18%]; P = .04). Carefully designed surveillance studies linking laboratory and clinical data are required to better inform future FPPL.</p>","PeriodicalId":18586,"journal":{"name":"Medical mycology","volume":"62 6","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-06-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11210617/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141469458","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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