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IEEE Transactions on NanoBioscience最新文献

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ZebraVas: A Non-Invasive Microvision System for Vascular Recognition and Blood Flow Monitoring of Zebrafish Larvae ZebraVas：一种用于斑马鱼幼体血管识别和血流监测的无创微视觉系统。
IF 3.7 4区 生物学
IEEE Transactions on NanoBioscience Pub Date : 2024-12-23 DOI: 10.1109/TNB.2024.3520137
Zhongyi Guo;Nana Ai;Wei Ge;Qingsong Xu
{"title":"ZebraVas: A Non-Invasive Microvision System for Vascular Recognition and Blood Flow Monitoring of Zebrafish Larvae","authors":"Zhongyi Guo;Nana Ai;Wei Ge;Qingsong Xu","doi":"10.1109/TNB.2024.3520137","DOIUrl":"10.1109/TNB.2024.3520137","url":null,"abstract":"Zebrafish have emerged as a powerful model organism in cardiovascular disease research. Accurately identifying zebrafish blood vessels and evaluating blood flow velocity without injury has a wide range of biological applications. This paper presents the design and development of a non-invasive microvision system for vascular recognition and blood flow monitoring of zebrafish larvae. For the first time, a visual algorithm based on color thresholding and discrete Fourier transform filtering is proposed to determine the position of zebrafish dorsal cardinal vein vessels. Next, the blood flow velocity is determined based on the change rate of pixel values near the centroid point of the blood vessel recognition results. Then, an independent software system is developed based on the producer-consumer underlying framework. A user-friendly interface is specifically designed for biomedical workers, and a complete prototype system is built in combination with hardware devices. In addition, relevant experiments were conducted, and the results indicated that the system can effectively recognize the position of vessels and monitor blood flow velocity in zebrafish larvae under different anesthesia concentrations and developmental days. The heart rate information obtained based on blood flow velocity is consistent with the heart beating frequency. Moreover, the system has also been successfully applied to blood flow velocity monitoring under fluorescence conditions. In future work, this system will be applied in drug screening research for cardiovascular-related diseases of zebrafish larvae.","PeriodicalId":13264,"journal":{"name":"IEEE Transactions on NanoBioscience","volume":"24 2","pages":"225-233"},"PeriodicalIF":3.7,"publicationDate":"2024-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143541726","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Microtubule Deformation Modulates Intracellular Transport by Kinesin Differently Than Dynein 微管变形通过运动蛋白调节细胞内运输与动力蛋白不同。
IF 3.7 4区 生物学
IEEE Transactions on NanoBioscience Pub Date : 2024-11-27 DOI: 10.1109/TNB.2024.3507021
Syeda Rubaiya Nasrin;Tanjina Afrin;Arif Md. Rashedul Kabir;Daisuke Inoue;Takefumi Yamashita;Makoto Oura;Johtaro Yamamoto;Masataka Kinjo;Kazuki Sada;Akira Kakugo
{"title":"Microtubule Deformation Modulates Intracellular Transport by Kinesin Differently Than Dynein","authors":"Syeda Rubaiya Nasrin;Tanjina Afrin;Arif Md. Rashedul Kabir;Daisuke Inoue;Takefumi Yamashita;Makoto Oura;Johtaro Yamamoto;Masataka Kinjo;Kazuki Sada;Akira Kakugo","doi":"10.1109/TNB.2024.3507021","DOIUrl":"10.1109/TNB.2024.3507021","url":null,"abstract":"Mechanical stress on cells is transmitted through many biological processes, for example, cell shape control, tissue patterning, and axonal homeostasis. Microtubules, a cytoskeletal component, presumably play a significant role in the mechanoregulation of cellular processes. We investigate motor protein-driven transport of quantum dots along mechanically deformed microtubules. We found that microtubule deformation significantly slowed kinesin-driven transport, whereas we previously reported dynein-driven transport was rather robust. Such dualistic modulation of transportation dynamics of the motor proteins by microtubule deformation can be attributed to the altered affinity of the motor proteins for buckled microtubules. Our results may form the basis for understanding microtubules’ role in regulating cellular processes in a mechanically adverse environment through its detection ability and response to mechanical stress.","PeriodicalId":13264,"journal":{"name":"IEEE Transactions on NanoBioscience","volume":"24 2","pages":"218-224"},"PeriodicalIF":3.7,"publicationDate":"2024-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143604646","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Investigating Physical Layer Security in Molecular Communication Networks 研究分子通信网络的物理层安全性。
IF 3.7 4区 生物学
IEEE Transactions on NanoBioscience Pub Date : 2024-11-22 DOI: 10.1109/TNB.2024.3504540
Fatemeh Sadat Saeidi;Naghmeh Sadat Moayedian
{"title":"Investigating Physical Layer Security in Molecular Communication Networks","authors":"Fatemeh Sadat Saeidi;Naghmeh Sadat Moayedian","doi":"10.1109/TNB.2024.3504540","DOIUrl":"10.1109/TNB.2024.3504540","url":null,"abstract":"In molecular communication networks, understanding the security level allows us to assess the quality of information transmitted accurately. The presence of unintended nodes in these networks is one of the factors compromising the security of information. This paper considers the simultaneous presence of a jammer and an eavesdropper as unintended nodes. This existence of unintended nodes prompts us to explore methods for assessing the security of a proposed system. Physical layer approaches can be regarded as one of the most efficient methods for assessing security in molecular communication networks. In this paper, we have utilized these approaches instead of the conventional cryptographic methods. At this layer, we have used several metrics to evaluate the security of our system; secrecy capacity (SC), the average probability of error (APOE), and comprehensive secure distance (CSD). By using SC, we also employed other approaches to improve security, such as changing the time interval, jamming molecules, and varying the distance between the transmitter and the receiver. As the last step, Monte Carlo simulation is used to verify the results obtained through analytical analysis.","PeriodicalId":13264,"journal":{"name":"IEEE Transactions on NanoBioscience","volume":"24 2","pages":"208-217"},"PeriodicalIF":3.7,"publicationDate":"2024-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143604644","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Electrospun Stannic Oxide Nanofiber Thin-Film Based Sensing Device for Monitoring Functional Behaviors of Adherent Mammalian Cells 基于电纺氧化锡纳米纤维薄膜的传感设备，用于监测粘附的哺乳动物细胞的功能行为。
IF 3.7 4区 生物学
IEEE Transactions on NanoBioscience Pub Date : 2024-11-04 DOI: 10.1109/TNB.2024.3489353
Uvanesh Kasiviswanathan;Chandan Kumar;Ajay Kumar Sahi;Amit Kumar;Satyabrata Jit;Neeraj Sharma;Sanjeev Kumar Mahto
{"title":"Electrospun Stannic Oxide Nanofiber Thin-Film Based Sensing Device for Monitoring Functional Behaviors of Adherent Mammalian Cells","authors":"Uvanesh Kasiviswanathan;Chandan Kumar;Ajay Kumar Sahi;Amit Kumar;Satyabrata Jit;Neeraj Sharma;Sanjeev Kumar Mahto","doi":"10.1109/TNB.2024.3489353","DOIUrl":"10.1109/TNB.2024.3489353","url":null,"abstract":"This study presents a biosensor utilizing electrospun SnO2 nanofiber films for real-time monitoring of C2C12 cells. The biosensor demonstrates sensitivity towards cellular behaviors, including adhesion, proliferation, and detachment. Alterations in semi-circle and dielectric properties are validated through Nyquist plot and an EEC model, highlighting the biosensor’s potential for analyzing cellular dynamics.","PeriodicalId":13264,"journal":{"name":"IEEE Transactions on NanoBioscience","volume":"24 1","pages":"120-126"},"PeriodicalIF":3.7,"publicationDate":"2024-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142576049","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
“Galaxy” Encoding: Toward High Storage Density and Low Cost "银河 "编码：实现高存储密度和低成本。
IF 3.7 4区 生物学
IEEE Transactions on NanoBioscience Pub Date : 2024-10-28 DOI: 10.1109/TNB.2024.3481504
Xuncai Zhang;Yunfei Lu
{"title":"“Galaxy” Encoding: Toward High Storage Density and Low Cost","authors":"Xuncai Zhang;Yunfei Lu","doi":"10.1109/TNB.2024.3481504","DOIUrl":"10.1109/TNB.2024.3481504","url":null,"abstract":"DNA is considered one of the most attractive storage media because of its excellent reliability and durability. Early encoding schemes lacked flexibility and scalability. To address these limitations, we propose a combination of static mapping and dynamic encoding, named “Galaxy” encoding. This scheme uses both the “dual-rule interleaving” algorithm and the “twelve-element Huffman rotational encoding” algorithm. We tested it with “Shakespeare Sonnets” and other files, achieving an encoding information density of approximately 2.563 bits/nt. Additionally, the inclusion of Reed–Solomon error-correcting codes can correct nearly 5% of the errors. Our simulations show that it supports various file types (.gz, .tar, .exe, etc.). We also analyzed the cost and fault tolerance of “Galaxy” encoding, demonstrating its high coding efficiency and ability to fully recover original information while effectively reducing the costs of DNA synthesis and sequencing.","PeriodicalId":13264,"journal":{"name":"IEEE Transactions on NanoBioscience","volume":"24 2","pages":"200-207"},"PeriodicalIF":3.7,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142521805","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
2024 Index IEEE Transactions on NanoBioscience Vol. 23 2024 Index IEEE Transactions on NanoBioscience Vol.
IF 3.7 4区 生物学
IEEE Transactions on NanoBioscience Pub Date : 2024-10-23 DOI: 10.1109/TNB.2024.3483609
{"title":"2024 Index IEEE Transactions on NanoBioscience Vol. 23","authors":"","doi":"10.1109/TNB.2024.3483609","DOIUrl":"https://doi.org/10.1109/TNB.2024.3483609","url":null,"abstract":"","PeriodicalId":13264,"journal":{"name":"IEEE Transactions on NanoBioscience","volume":"23 4","pages":"1-14"},"PeriodicalIF":3.7,"publicationDate":"2024-10-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=10731932","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142518145","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
IEEE Transactions on NanoBioscience Publication Information 电气和电子工程师学会《纳米生物科学论文集》出版信息
IF 3.7 4区 生物学
IEEE Transactions on NanoBioscience Pub Date : 2024-10-15 DOI: 10.1109/TNB.2024.3460099
{"title":"IEEE Transactions on NanoBioscience Publication Information","authors":"","doi":"10.1109/TNB.2024.3460099","DOIUrl":"https://doi.org/10.1109/TNB.2024.3460099","url":null,"abstract":"","PeriodicalId":13264,"journal":{"name":"IEEE Transactions on NanoBioscience","volume":"23 4","pages":"C2-C2"},"PeriodicalIF":3.7,"publicationDate":"2024-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=10718717","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142438542","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Guest Editorial Special Section on Biomedical and Health Informatics 生物医学与健康信息学》特邀编辑专栏
IF 3.7 4区 生物学
IEEE Transactions on NanoBioscience Pub Date : 2024-10-15 DOI: 10.1109/TNB.2024.3460448
Xiaohua Hu
{"title":"Guest Editorial Special Section on Biomedical and Health Informatics","authors":"Xiaohua Hu","doi":"10.1109/TNB.2024.3460448","DOIUrl":"https://doi.org/10.1109/TNB.2024.3460448","url":null,"abstract":"","PeriodicalId":13264,"journal":{"name":"IEEE Transactions on NanoBioscience","volume":"23 4","pages":"538-539"},"PeriodicalIF":3.7,"publicationDate":"2024-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=10718701","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142438497","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Errata to “Benchmarking Power Generation From Multiple Wastewater Electrolytes in Microbial Fuel Cells With 3D Printed Disk-Electrodes” 利用 3D 打印磁盘电极在微生物燃料电池中利用多种废水电解质发电的基准测试 "勘误表
IF 3.7 4区 生物学
IEEE Transactions on NanoBioscience Pub Date : 2024-10-15 DOI: 10.1109/TNB.2024.3443498
Yuvraj Maphrio Mao;Khairunnisa Amreen;Sanket Goel
{"title":"Errata to “Benchmarking Power Generation From Multiple Wastewater Electrolytes in Microbial Fuel Cells With 3D Printed Disk-Electrodes”","authors":"Yuvraj Maphrio Mao;Khairunnisa Amreen;Sanket Goel","doi":"10.1109/TNB.2024.3443498","DOIUrl":"https://doi.org/10.1109/TNB.2024.3443498","url":null,"abstract":"Presents corrections to the paper, Benchmarking Power Generation From 2 Multiple Wastewater Electrolytes in Microbial 3 Fuel Cells With 3D Printed Disk-Electrodes.","PeriodicalId":13264,"journal":{"name":"IEEE Transactions on NanoBioscience","volume":"23 4","pages":"612-613"},"PeriodicalIF":3.7,"publicationDate":"2024-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=10718702","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142438541","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
IEEE Transactions on NanoBioscience Information for Authors 电气和电子工程师学会《纳米生物科学学报》为作者提供的信息
IF 3.7 4区 生物学
IEEE Transactions on NanoBioscience Pub Date : 2024-10-15 DOI: 10.1109/TNB.2024.3460103
{"title":"IEEE Transactions on NanoBioscience Information for Authors","authors":"","doi":"10.1109/TNB.2024.3460103","DOIUrl":"https://doi.org/10.1109/TNB.2024.3460103","url":null,"abstract":"","PeriodicalId":13264,"journal":{"name":"IEEE Transactions on NanoBioscience","volume":"23 4","pages":"C3-C3"},"PeriodicalIF":3.7,"publicationDate":"2024-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=10718718","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142438616","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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