Canadian journal of microbiology最新文献

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Regulation of virulence mechanisms in plant-pathogenic Streptomyces. 植物致病链霉菌毒力机制的调控。
IF 1.8 4区 生物学
Canadian journal of microbiology Pub Date : 2024-06-01 Epub Date: 2024-01-08 DOI: 10.1139/cjm-2023-0171
Corrie V Vincent, Dawn R D Bignell
{"title":"Regulation of virulence mechanisms in plant-pathogenic <i>Streptomyces</i>.","authors":"Corrie V Vincent, Dawn R D Bignell","doi":"10.1139/cjm-2023-0171","DOIUrl":"10.1139/cjm-2023-0171","url":null,"abstract":"<p><p><i>Streptomyces</i> have a uniquely complex developmental life cycle that involves the coordination of morphological differentiation with the production of numerous bioactive specialized metabolites. The majority of <i>Streptomyces</i> spp. are soil-dwelling saprophytes, while plant pathogenicity is a rare attribute among members of this genus<i>.</i> Phytopathogenic <i>Streptomyces</i> are responsible for economically important diseases such as common scab, which affects potato and other root crops. Following the acquisition of genes encoding virulence factors, <i>Streptomyces</i> pathogens are expected to have specifically adapted their regulatory pathways to enable transition from a primarily saprophytic to a pathogenic lifestyle. Investigations of the regulation of pathogenesis have primarily focused on <i>Streptomyces scabiei</i> and the principal pathogenicity determinant thaxtomin A. The coordination of growth and thaxtomin A production in this species is controlled in a hierarchical manner by cluster-situated regulators, pleiotropic regulators, signalling and plant-derived molecules, and nutrients. Although the majority of phytopathogenic <i>Streptomyces</i> produce thaxtomins, many also produce additional virulence factors, and there are scab-causing pathogens that do not produce thaxtomins. The development of effective control strategies for common scab and other <i>Streptomyces</i> plant diseases requires a more in-depth understanding of the genetic and environmental factors that modulate the plant pathogenic lifestyle of these organisms.</p>","PeriodicalId":9381,"journal":{"name":"Canadian journal of microbiology","volume":" ","pages":"199-212"},"PeriodicalIF":1.8,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139401998","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
High diversity within and low but significant genetic differentiation among geographic and temporal populations of the global Streptococcus pneumoniae. 全球肺炎链球菌地理和时间种群内部的多样性很高,而种群之间的遗传分化较低但很明显。
IF 2.8 4区 生物学
Canadian journal of microbiology Pub Date : 2024-06-01 Epub Date: 2024-02-29 DOI: 10.1139/cjm-2023-0155
Jezreel Dalmieda, Megan Hitchcock, Jianping Xu
{"title":"High diversity within and low but significant genetic differentiation among geographic and temporal populations of the global <i>Streptococcus pneumoniae</i>.","authors":"Jezreel Dalmieda, Megan Hitchcock, Jianping Xu","doi":"10.1139/cjm-2023-0155","DOIUrl":"10.1139/cjm-2023-0155","url":null,"abstract":"<p><p><i>Streptococcus pneumoniae</i> is the major cause of invasive pneumococcal disease. However, the global population structure remains largely unexplored. In this study, we investigated the spatial and temporal patterns of genetic variation of <i>S</i>. <i>pneumoniae</i> based on archived multilocus sequence typing data from PubMLST.org. Our analyses demonstrated both shared and unique distributions of sequence types (STs) and allele types among regional populations. Among the 17 915 global STs, 36 representing 15 263 isolates were broadly shared among all six continents, consistent with recent clonal dispersal and expansion of this pathogen. The analysis of molecular variance revealed that >96% genetic variations were found within individual regional populations. However, though low (<4%), statistically significant genetic differentiation among regional populations was observed. Comparisons between non-clone-corrected and clone-corrected datasets showed that localized clonal expansion contributed significantly to the observed genetic differentiations among regions. Temporal analyses of the isolates showed that implementation of pneumococcal conjugate vaccine impacted the distributions of STs, but the effect on population structure was relatively limited. Linkage disequilibrium analyses identified evidence for recombination in all continental populations; however, the inferred recombination was not random. We discussed the limitations and implications of our analyses to the global epidemiology and future vaccine developments for <i>S</i>. <i>pneumoniae.</i></p>","PeriodicalId":9381,"journal":{"name":"Canadian journal of microbiology","volume":" ","pages":"226-237"},"PeriodicalIF":2.8,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139995691","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Investigating the spatiotemporal dynamics of apple tree phyllosphere bacterial and fungal communities across cultivars in orchards. 调查果园中不同栽培品种苹果树叶球细菌和真菌群落的时空动态。
IF 2.8 4区 生物学
Canadian journal of microbiology Pub Date : 2024-06-01 Epub Date: 2024-04-19 DOI: 10.1139/cjm-2023-0215
Sophie Boutin, Ema Lussier, Isabelle Laforest-Lapointe
{"title":"Investigating the spatiotemporal dynamics of apple tree phyllosphere bacterial and fungal communities across cultivars in orchards.","authors":"Sophie Boutin, Ema Lussier, Isabelle Laforest-Lapointe","doi":"10.1139/cjm-2023-0215","DOIUrl":"10.1139/cjm-2023-0215","url":null,"abstract":"<p><p>The phyllosphere, a reservoir of diverse microbial life associated with plant health, harbors microbial communities that are subject to various complex ecological processes acting at multiple scales. In this study, we investigated the determinants of the spatiotemporal variation in bacterial and fungal communities within the apple tree phyllosphere, employing 16S and ITS amplicon sequencing. Our research assessed the impact of key factors-plant compartment, site, time, and cultivar-on the composition and diversity of leaf and flower microbial communities. Our analyses, based on samples collected from three cultivars in three orchards in 2022, revealed that site and time are the strongest drivers of apple tree phyllosphere microbial communities. Conversely, plant compartment and cultivar exhibited minor roles in explaining community composition and diversity. Predominantly, bacterial communities comprised <i>Hymenobacter</i> (25%) and <i>Sphingomonas</i> (10%), while the most relatively abundant fungal genera included <i>Aureobasidium</i> (27%) and <i>Sporobolomyces</i> (10%). Additionally, our results show a gradual decrease in alpha-diversity throughout the growth season. These findings emphasize the necessity to consider local microbial ecology dynamics in orchards, especially as many groups worldwide aim for the development of biocontrol strategies (e.g., by manipulating plant-microbe interactions). More research is needed to improve our understanding of the determinants of time and site-specific disparities within apple tree phyllosphere microbial communities across multiple years, locations, and cultivars.</p>","PeriodicalId":9381,"journal":{"name":"Canadian journal of microbiology","volume":" ","pages":"238-251"},"PeriodicalIF":2.8,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140058680","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Biological and genomic characteristics of three novel bacteriophages and a phage-plasmid of Klebsiella pneumoniae. 肺炎克雷伯氏菌的三种新型噬菌体和一种噬菌体-质粒的生物学和基因组特征
IF 2.8 4区 生物学
Canadian journal of microbiology Pub Date : 2024-06-01 Epub Date: 2024-03-06 DOI: 10.1139/cjm-2023-0188
Aylin Uskudar-Guclu, Sezin Unlu, Hanife Salih-Dogan, Suleyman Yalcin, Ahmet Basustaoglu
{"title":"Biological and genomic characteristics of three novel bacteriophages and a phage-plasmid of <i>Klebsiella pneumoniae</i>.","authors":"Aylin Uskudar-Guclu, Sezin Unlu, Hanife Salih-Dogan, Suleyman Yalcin, Ahmet Basustaoglu","doi":"10.1139/cjm-2023-0188","DOIUrl":"10.1139/cjm-2023-0188","url":null,"abstract":"<p><p>Bacteriophages have emerged as promising candidates for the treatment of difficult-to-treat bacterial infections. The aim of this study is to isolate and characterize phages infecting carbapenem-resistant and extended-spectrum beta-lactamase producer <i>Klebsiella pneumoniae</i> isolates. Water samples were taken for the isolation of bacteriophages. One-step growth curve, the optimal multiplicity of infection (MOI), thermal and pH stabilities, transmission electron microscopy and whole-genome sequencing of phages were studied. Four phages were isolated and named <i>Klebsiella</i> phage Kpn02, Kpn17, Kpn74, and Kpn13. The optimal MOI and latent periods of phage Kpn02, Kpn17, Kpn74, and Kpn13 were 10, 1, 0.001, and 100 PFU/CFU and 20, 10, 20, and 30 min, respectively. Burst sizes ranged from 811 to 2363. No known antibiotic resistance and virulence genes were identified. No tRNAs were detected except <i>Klebsiella</i> phage Kpn02 which encodes 24 tRNAs. Interestingly, <i>Klebsiella</i> phage Kpn74 was predicted to be a lysogenic phage whose prophage is a linear plasmid molecule with covalently closed ends. Of the <i>Klebsiella</i>-infecting phages presented in current study, virulent phages suggest that they may represent candidate therapeutic agents against MDR <i>K. pneumoniae</i>, based on short latent period, high burst sizes and no known antibiotic resistance and virulence genes in their genomes.</p>","PeriodicalId":9381,"journal":{"name":"Canadian journal of microbiology","volume":" ","pages":"213-225"},"PeriodicalIF":2.8,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140048851","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Plant seedlings of peas, tomatoes, and cucumbers exude compounds that are needed for growth and chemoattraction of Rhizobium leguminosarum bv. viciae 3841 and Azospirillum brasilense Sp7. 豌豆、西红柿和黄瓜的幼苗渗出的化合物是豆科根瘤菌(Rhizobium leguminosarum bv. viciae 3841)和巴西绿氮菌(Azospirillum brasilense Sp7)生长和趋化所需的。
IF 2.8 4区 生物学
Canadian journal of microbiology Pub Date : 2024-05-01 Epub Date: 2024-03-01 DOI: 10.1139/cjm-2023-0217
Fatema A Nisha, Janice N A Tagoe, Amanda B Pease, Shelley M Horne, Angel Ugrinov, Barney A Geddes, Birgit M Prüß
{"title":"Plant seedlings of peas, tomatoes, and cucumbers exude compounds that are needed for growth and chemoattraction of <i>Rhizobium leguminosarum</i> bv. <i>viciae</i> 3841 and <i>Azospirillum brasilense</i> Sp7.","authors":"Fatema A Nisha, Janice N A Tagoe, Amanda B Pease, Shelley M Horne, Angel Ugrinov, Barney A Geddes, Birgit M Prüß","doi":"10.1139/cjm-2023-0217","DOIUrl":"10.1139/cjm-2023-0217","url":null,"abstract":"<p><p>This study characterizes seedling exudates of peas, tomatoes, and cucumbers at the level of chemical composition and functionality. A plant experiment confirmed that <i>Rhizobium leguminosarum</i> bv. <i>viciae</i> 3841 enhanced growth of pea shoots, while <i>Azospirillum brasilense</i> Sp7 supported growth of pea, tomato, and cucumber roots. Chemical analysis of exudates after 1 day of seedling incubation in water yielded differences between the exudates of the three plants. Most remarkably, cucumber seedling exudate did not contain detectable sugars. All exudates contained amino acids, nucleobases/nucleosides, and organic acids, among other compounds. Cucumber seedling exudate contained reduced glutathione. Migration on semi solid agar plates containing individual exudate compounds as putative chemoattractants revealed that <i>R. leguminosarum</i> bv. <i>viciae</i> was more selective than <i>A. brasilense</i>, which migrated towards any of the compounds tested. Migration on semi solid agar plates containing 1:1 dilutions of seedling exudate was observed for each of the combinations of bacteria and exudates tested. Likewise, <i>R. leguminosarum</i> bv. <i>viciae</i> and <i>A. brasilense</i> grew on each of the three seedling exudates, though at varying growth rates. We conclude that the seedling exudates of peas, tomatoes, and cucumbers contain everything that is needed for their symbiotic bacteria to migrate and grow on.</p>","PeriodicalId":9381,"journal":{"name":"Canadian journal of microbiology","volume":" ","pages":"150-162"},"PeriodicalIF":2.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140012184","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Do we still need Illumina sequencing data? Evaluating Oxford Nanopore Technologies R10.4.1 flow cells and the Rapid v14 library prep kit for Gram negative bacteria whole genome assemblies. 我们还需要 Illumina 测序数据吗?评估牛津纳米孔技术公司 R10.4.1 流式细胞和 Rapid v14 文库预处理试剂盒用于革兰氏阴性细菌全基因组组装的效果。
IF 2.8 4区 生物学
Canadian journal of microbiology Pub Date : 2024-05-01 Epub Date: 2024-02-14 DOI: 10.1139/cjm-2023-0175
Nicole Lerminiaux, Ken Fakharuddin, Michael R Mulvey, Laura Mataseje
{"title":"Do we still need Illumina sequencing data? Evaluating Oxford Nanopore Technologies R10.4.1 flow cells and the Rapid v14 library prep kit for Gram negative bacteria whole genome assemblies.","authors":"Nicole Lerminiaux, Ken Fakharuddin, Michael R Mulvey, Laura Mataseje","doi":"10.1139/cjm-2023-0175","DOIUrl":"10.1139/cjm-2023-0175","url":null,"abstract":"<p><p>The best whole genome assemblies are currently built from a combination of highly accurate short-read sequencing data and long-read sequencing data that can bridge repetitive and problematic regions. Oxford Nanopore Technologies (ONT) produce long-read sequencing platforms and they are continually improving their technology to obtain higher quality read data that is approaching the quality obtained from short-read platforms such as Illumina. As these innovations continue, we evaluated how much ONT read coverage produced by the Rapid Barcoding Kit v14 (SQK-RBK114) is necessary to generate high-quality hybrid and long-read-only genome assemblies for a panel of carbapenemase-producing <i>Enterobacterales</i> bacterial isolates. We found that 30× long-read coverage is sufficient if Illumina data are available, and that more (at least 100× long-read coverage is recommended for long-read-only assemblies. Illumina polishing is still improving single nucleotide variants (SNVs) and INDELs in long-read-only assemblies. We also examined if antimicrobial resistance genes could be accurately identified in long-read-only data, and found that Flye assemblies regardless of ONT coverage detected >96% of resistance genes at 100% identity and length. Overall, the Rapid Barcoding Kit v14 and long-read-only assemblies can be an optimal sequencing strategy (i.e., plasmid characterization and AMR detection) but finer-scale analyses (i.e., SNV) still benefit from short-read data.</p>","PeriodicalId":9381,"journal":{"name":"Canadian journal of microbiology","volume":" ","pages":"178-189"},"PeriodicalIF":2.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139734521","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterization of hydrocarbon degraders from Northwest Passage beach sediments and assessment of their ability for bioremediation. 西北通道海滩沉积物中碳氢化合物降解剂的特征及其生物修复能力评估。
IF 2.8 4区 生物学
Canadian journal of microbiology Pub Date : 2024-05-01 Epub Date: 2024-02-13 DOI: 10.1139/cjm-2023-0093
Antoine-O Lirette, Ya-Jou Chen, Nastasia J Freyria, Esteban Góngora, Charles W Greer, Lyle G Whyte
{"title":"Characterization of hydrocarbon degraders from Northwest Passage beach sediments and assessment of their ability for bioremediation.","authors":"Antoine-O Lirette, Ya-Jou Chen, Nastasia J Freyria, Esteban Góngora, Charles W Greer, Lyle G Whyte","doi":"10.1139/cjm-2023-0093","DOIUrl":"10.1139/cjm-2023-0093","url":null,"abstract":"<p><p>Global warming-induced sea ice loss in the Canadian Northwest Passage (NWP) will result in more shipping traffic, increasing the risk of oil spills. Microorganisms inhabiting NWP beach sediments may degrade hydrocarbons, offering a potential bioremediation strategy. In this study, the characterization and genomic analyses of 22 hydrocarbon-biodegradative bacterial isolates revealed that they contained a diverse range of key alkane and aromatic hydrocarbon-degradative genes, as well as cold and salt tolerance genes indicating they are highly adapted to the extreme Arctic environment. Some isolates successfully degraded Ultra Low Sulfur Fuel Oil (ULSFO) at temperatures as low as -5 °C and high salinities (3%-10%). Three isolates were grown in liquid medium containing ULSFO as sole carbon source over 3 months and variation of hydrocarbon concentration was measured at three time points to determine their rate of hydrocarbon biodegradation. Our results demonstrate that two isolates (<i>Rhodococcus</i> sp. R1B_2T and <i>Pseudarthrobacter</i> sp. R2D_1T) possess complete degradation pathways and can grow on alkane and aromatic components of ULSFO under Arctic conditions. Overall, these results demonstrate that diverse hydrocarbon-degrading microorganisms exist in the NWP beach sediments, offering a potential bioremediation strategy in the events of a marine fuel spill reaching the shores of the NWP.</p>","PeriodicalId":9381,"journal":{"name":"Canadian journal of microbiology","volume":" ","pages":"163-177"},"PeriodicalIF":2.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139729058","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Spatial arrangement and density variations in the cell envelope of Deinococcus radiodurans. 放射虫细胞包膜的空间排列和密度变化。
IF 2.8 4区 生物学
Canadian journal of microbiology Pub Date : 2024-05-01 Epub Date: 2024-03-25 DOI: 10.1139/cjm-2023-0163
Domenica Farci, Dario Piano
{"title":"Spatial arrangement and density variations in the cell envelope of <i>Deinococcus radiodurans</i>.","authors":"Domenica Farci, Dario Piano","doi":"10.1139/cjm-2023-0163","DOIUrl":"10.1139/cjm-2023-0163","url":null,"abstract":"<p><p>The cell envelope of the poly-extremophile bacterium <i>Deinococcus radiodurans</i> is renowned for its highly organized structure and unique functional characteristics. In this bacterium, a precise regularity characterizes not just the S-layer, but it also extends to the underlying cell envelope layers, resulting in a dense and tightly arranged configuration. This regularity is attributed to a minimum of three protein complexes located at the outer membrane level. Together, they constitute a recurring structural unit that extends across the cell envelope, effectively tiling the entirety of the cell body. Nevertheless, a comprehensive grasp of the vacant spaces within each layer and their functional roles remains limited. In this study, we delve into these aspects by integrating the state of the art with structural calculations. This approach provides crucial evidence supporting an evolutive pressure intricately linked to surface phenomena depending on the environmental conditions.</p>","PeriodicalId":9381,"journal":{"name":"Canadian journal of microbiology","volume":" ","pages":"190-198"},"PeriodicalIF":2.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140206384","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Inhibition of the type IV secretion system from antibiotic-resistant Helicobacter pylori clinical isolates supports the potential of Cagα as an anti-virulence target. 抑制抗生素耐药幽门螺旋杆菌临床分离株的 IV 型分泌系统支持了 Cagα 作为抗病毒靶点的潜力。
IF 2.8 4区 生物学
Canadian journal of microbiology Pub Date : 2024-04-01 Epub Date: 2024-01-04 DOI: 10.1139/cjm-2023-0168
Flore Oudouhou, Claire Morin, Mickael Bouin, Christiane Gaudreau, Christian Baron
{"title":"Inhibition of the type IV secretion system from antibiotic-resistant <i>Helicobacter pylori</i> clinical isolates supports the potential of Cagα as an anti-virulence target.","authors":"Flore Oudouhou, Claire Morin, Mickael Bouin, Christiane Gaudreau, Christian Baron","doi":"10.1139/cjm-2023-0168","DOIUrl":"10.1139/cjm-2023-0168","url":null,"abstract":"<p><p><i>Helicobacter pylori</i> resistance to antibiotics is a growing problem and it increasingly leads to treatment failure. While the bacterium is present worldwide, the severity of clinical outcomes is highly dependent on the geographical origin and genetic characteristics of the strains. One of the major virulence factors identified in <i>H. pylori</i> is the <i>cag</i> pathogenicity island (<i>cag</i>PAI), which encodes a type IV secretion system (T4SS) used to translocate effectors into human cells. Here, we investigated the genetic variability of the <i>cag</i>PAI among 13 antibiotic-resistant <i>H. pylori</i> strains that were isolated from patient biopsies in Québec. Seven of the clinical strains carried the <i>cag</i>PAI, but only four could be readily cultivated under laboratory conditions. We observed variability of the sequences of CagA and CagL proteins that are encoded by the <i>cag</i>PAI. All clinical isolates induce interleukin-8 secretion and morphological changes upon co-incubation with gastric cancer cells and two of them produce extracellular T4SS pili. Finally, we demonstrate that molecule 1G2, a small molecule inhibitor of the Cagα protein from the model strain <i>H. pylori</i> 26695, reduces interleukin-8 secretion in one of the clinical isolates. Co-incubation with 1G2 also inhibits the assembly of T4SS pili, suggesting a mechanism for its action on T4SS function.</p>","PeriodicalId":9381,"journal":{"name":"Canadian journal of microbiology","volume":" ","pages":"119-127"},"PeriodicalIF":2.8,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139097367","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unveiling the fungal color palette: pigment analysis of Fusarium solani species complex and Curvularia verruculosa clinical isolates. 揭开真菌调色板的神秘面纱:Fusarium solani 种复合菌和 Curvularia verruculosa 临床分离菌的色素分析。
IF 2.8 4区 生物学
Canadian journal of microbiology Pub Date : 2024-04-01 Epub Date: 2024-01-17 DOI: 10.1139/cjm-2023-0181
Luis Enrique Chaves-González, Daniela Jaikel-Víquez, Stefany Lozada-Alvarado, Fabio Granados-Chinchilla
{"title":"Unveiling the fungal color palette: pigment analysis of <i>Fusarium solani</i> species complex and <i>Curvularia verruculosa</i> clinical isolates.","authors":"Luis Enrique Chaves-González, Daniela Jaikel-Víquez, Stefany Lozada-Alvarado, Fabio Granados-Chinchilla","doi":"10.1139/cjm-2023-0181","DOIUrl":"10.1139/cjm-2023-0181","url":null,"abstract":"<p><p>Fungal species in the <i>Nectriaceae</i>, such as <i>Fusarium</i> spp. (<i>Hypocreales: Nectriaceae</i>), are etiologic agents of hyalohyphomycosis capable of producing violaceous or yellowish pigments under certain conditions, while <i>Curvularia</i> spp. (<i>Pleosporales: Pleosporaceae</i>) are agents of phaeohyphomycosis and typically produce melanin in their cell walls. In nectriaceous and pleosporaceous fungi, these pigments are mainly constituted by polyketides (e.g., azaphilones, naphthoquinones, and hydroxyanthraquinones). Considering the importance of pigments synthesized by these genera, this work focused on the selective extraction of pigments produced by eight <i>Fusarium solani</i> species complex and one <i>Curvularia verruculosa</i> isolate recovered from dermatomycosis specimens, their separation, purification, and posterior chemical analysis. The pigments were characterized through spectral and acid-base analysis, and their maximum production time was determined. Moreover, spectral identification of isolates was carried out to approach the taxonomic specificity of pigment production. Herein we describe the isolation and characterization of three acidic pigments, yellowish and pinkish azaphilones (i.e., coaherin A and sclerotiorin), and a purplish xanthone, reported for the first time in the <i>Nectriaceae</i> and <i>Pleosporaceae</i>, which appear to be synthesized in a species-independent manner, in the case of fusaria.</p>","PeriodicalId":9381,"journal":{"name":"Canadian journal of microbiology","volume":" ","pages":"135-149"},"PeriodicalIF":2.8,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139485250","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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