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Establishment of Sertoli Cell Lines from Giant Pandas (Ailuropoda melanoleuca). 大熊猫支持细胞系的建立。
IF 3.2 2区 农林科学
Animals Pub Date : 2026-10-06 DOI: 10.3390/ani16193132
Lin Shi, Yuliang Liu, Rong Hou, Yi Zheng, Junhui An
{"title":"Establishment of Sertoli Cell Lines from Giant Pandas (<i>Ailuropoda melanoleuca</i>).","authors":"Lin Shi, Yuliang Liu, Rong Hou, Yi Zheng, Junhui An","doi":"10.3390/ani16193132","DOIUrl":"10.3390/ani16193132","url":null,"abstract":"<p><p>Giant pandas (<i>Ailuropoda melanoleuca</i>) are a critically protected endangered species in China, but current understanding of their testicular physiology and regulatory mechanisms for spermatogenesis remains limited. Sertoli cells (SCs), the sole somatic cell type within seminiferous tubules, play essential roles in nutritional support, blood-testis barrier (BTB) formation, and hormonal regulation, indispensable for germ cell development in testes. However, primary cultured SCs are prone to undergo replicative senescence, which severely impedes their in-depth studies in vitro. In this study, we introduced the SV40 large T antigen into giant panda primary testicular somatic cells via lentiviral transduction and then performed monoclonal isolation, eventually successfully establishing two immortalized cell lines (PD-SCs-1 and PD-SCs-2). These two cell lines exhibited long-term proliferative capacity and have been cultured for more than eight months and passaged over 70 times. They also stably expressed typical SC markers and retained intercellular junction-like structures and molecular responses to hormonal stimulation, supporting the preservation of several important SC characteristics. Yet, immortalization was accompanied by alterations in cellular properties, including reduced androgen receptor expression and chromosomal abnormalities. Together, the established PD-SCs-1 and PD-SCs-2 cell lines provide a valuable in vitro platform for in-depth investigation of the testicular niche, the mechanisms for spermatogenesis, and the pathology of reproductive disorders in giant pandas, and also lay the experimental groundwork for development of novel breeding technology and conservation of this endangered species.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":"16 19","pages":""},"PeriodicalIF":3.2,"publicationDate":"2026-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13663398/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149190835","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome-Wide Association Study of Body Measurement Traits at Birth in Cattle. 牛出生体测量性状的全基因组关联研究。
IF 3.2 2区 农林科学
Animals Pub Date : 2026-10-06 DOI: 10.3390/ani16193133
Xinlu Wang, Weiguo Ju, Xiaoming Ma, Min Chu, Yongfu La, Xian Guo, Ping Yan, Bo Yang, Chunnian Liang
{"title":"Genome-Wide Association Study of Body Measurement Traits at Birth in Cattle.","authors":"Xinlu Wang, Weiguo Ju, Xiaoming Ma, Min Chu, Yongfu La, Xian Guo, Ping Yan, Bo Yang, Chunnian Liang","doi":"10.3390/ani16193133","DOIUrl":"10.3390/ani16193133","url":null,"abstract":"<p><p>Hexi cattle are an indigenous beef population developed through multigenerational crossing of Simmental and Mongolian cattle, exhibiting exceptional adaptability to arid and semi-arid environments alongside robust growth performance. To investigate the genetic architecture underlying early growth traits, we conducted a GWAS for body weight (BW), withers height (WH), body length (BL), and heart girth (HG) in a cohort of 264 Hexi cattle (125 males, 139 females). Phenotypic analyses showed that male calves had significantly higher values for all traits relative to female calves (<i>p</i> < 0.05), confirming the presence of sexual dimorphism. The genomic inflation factors (λ = 0.997-1.016) indicated that population structure was effectively controlled. In total, 11 functional candidate genes were identified under the genome-wide significant threshold of <i>p</i> < 1.0 × 10<sup>-6</sup>. Specifically, <i>SLC44A1</i> associated with BW; <i>PTGS2</i>, <i>POP1</i>, and <i>ERC2</i> with WH; <i>TIAM1</i>, <i>PROK1</i>, <i>SMOC2</i>, and <i>RFFL</i> with BL; and <i>C3orf80</i>, <i>PROKR1</i>, and <i>FBXO32</i> with HG. These results not only advance our understanding of the genetic regulation of early development in Hexi cattle but also establish a foundation for implementing marker-assisted and genomic selection in this population.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":"16 19","pages":""},"PeriodicalIF":3.2,"publicationDate":"2026-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13663506/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149190870","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of Oral Iron and Commercial Colostrum Supplementation on Clinical Health and Haematological Parameters in Neonatal Chianina Beef Calves: A Pilot Study. 口服铁和商业初乳对新生中国牛犊牛临床健康和血液学参数影响的初步研究
IF 3.2 2区 农林科学
Animals Pub Date : 2026-10-06 DOI: 10.3390/ani16193134
Sala Giulia, Cinelli Vittoria, Minieri Sara, Meoli Gaia, Castelli Matteo, Wiedemann Ludovica, Sgorbini Micaela, Bonelli Francesca
{"title":"Effects of Oral Iron and Commercial Colostrum Supplementation on Clinical Health and Haematological Parameters in Neonatal Chianina Beef Calves: A Pilot Study.","authors":"Sala Giulia, Cinelli Vittoria, Minieri Sara, Meoli Gaia, Castelli Matteo, Wiedemann Ludovica, Sgorbini Micaela, Bonelli Francesca","doi":"10.3390/ani16193134","DOIUrl":"10.3390/ani16193134","url":null,"abstract":"<p><p>The neonatal period is a critical stage for calf health and development, and nutritional interventions have been proposed to support neonatal adaptation and reduce disease risk. However, evidence regarding their effectiveness in extensively reared beef breeds remains limited. This pilot study evaluated the effects of oral iron supplementation and administration of a commercial colostrum supplement on clinical health, haematological profile, passive transfer status, and growth performance in neonatal Chianina beef calves. Eighteen calves were randomly allocated to three groups: a control group, an oral iron supplementation group, and a commercial colostrum supplementation group. Clinical examinations and blood sampling were performed 48 h, 14 days, and 30 days after birth. Longitudinal data were analysed using linear mixed models and generalised estimating equations. No statistically significant overall treatment group effect was observed on the corrected Clinical Total Score (<i>p</i> = 0.123), although exploratory comparisons at the final assessment (30 days of age) showed lower scores in calves receiving the commercial colostrum supplement than in Control calves (nominal <i>p</i> = 0.008) and iron-supplemented calves (nominal <i>p</i> = 0.039). No significant differences were observed in growth performance, serum iron concentration, haematological variables, or the incidence of neonatal calf diarrhoea and bovine respiratory disease. Most haematological variables changed over time, reflecting normal neonatal physiological adaptation. These preliminary findings suggest a possible difference in clinical condition at 30 days of age in calves receiving commercial colostrum supplementation, but do not demonstrate an overall treatment effect during the study period. A single oral administration of the iron-containing supplement did not provide measurable clinical, haematological, or growth-related benefits under the conditions investigated.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":"16 19","pages":""},"PeriodicalIF":3.2,"publicationDate":"2026-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13663556/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149190690","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Extended Reality for Image-Guided Small Animal Surgery: Current Evidence, Clinical Applications, and Future Directions. 图像引导小动物手术的扩展现实:当前证据,临床应用和未来方向。
IF 3.2 2区 农林科学
Animals Pub Date : 2026-10-05 DOI: 10.3390/ani16193120
Domenico Caivano, Federica Valeri, Andrea Corda, Antonello Bufalari
{"title":"Extended Reality for Image-Guided Small Animal Surgery: Current Evidence, Clinical Applications, and Future Directions.","authors":"Domenico Caivano, Federica Valeri, Andrea Corda, Antonello Bufalari","doi":"10.3390/ani16193120","DOIUrl":"10.3390/ani16193120","url":null,"abstract":"<p><p>Image-guided surgery has become an integral component of modern veterinary surgery using advanced imaging modalities, such as computed tomography, magnetic resonance imaging, ultrasonography, and fluoroscopy. Recently, extended reality (XR) technologies have emerged as promising tools to enhance image-guided surgical procedures by improving three-dimensional anatomical understanding, surgical navigation, and intraoperative decision-making. Although XR has gained considerable attention in human surgery, its application in veterinary surgery remains at an early stage. This narrative review aimed to provide a comprehensive overview of the current evidence regarding XR technologies in small animal surgery, with particular emphasis on their integration with preoperative and intraoperative imaging modalities. The available literature was reviewed to evaluate current clinical applications, technological developments and future perspectives. A literature search was performed in PubMed, Scopus, and Web of Science for studies published up to May 2026 using combinations of terms related to extended reality and small animal veterinary surgery. Original articles, case reports, pilot studies, technical reports, and reviews addressing clinical, experimental, or simulation-based applications were considered. Although several studies have explored the use of XR technologies for veterinary education, anatomical training, and diagnostic imaging instruction, relatively few investigations have assessed their direct application in clinical surgical practice. Potential applications have been described in orthopedic, oncologic, neurologic, cardiovascular, and minimally invasive procedures. Crucially, the currently available peer-reviewed evidence is restricted to canine patients, as no eligible feline studies were identified. Current evidence suggests that XR is an emerging technology with potential applications in canine surgical planning, image-guided procedures, and surgical training. Further prospective clinical studies are required to establish its clinical effectiveness, cost-effectiveness, and impact on surgical outcomes.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":"16 19","pages":""},"PeriodicalIF":3.2,"publicationDate":"2026-10-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13663551/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149190740","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
DWEC-YOLO: A Multi-Behavior Detection Model for Group-Housed Pigs. 群养猪多行为检测模型dweco - yolo
IF 3.2 2区 农林科学
Animals Pub Date : 2026-10-05 DOI: 10.3390/ani16193125
Yan Chen, Jiehao Wu, Yingjie Kuang, Qiumei Yang
{"title":"DWEC-YOLO: A Multi-Behavior Detection Model for Group-Housed Pigs.","authors":"Yan Chen, Jiehao Wu, Yingjie Kuang, Qiumei Yang","doi":"10.3390/ani16193125","DOIUrl":"10.3390/ani16193125","url":null,"abstract":"<p><p>In large-scale pig farming systems, high visual similarity among pigs, complex posture variations, and frequent interactions between individuals pose significant challenges to vision-based multi-behavior detection. To overcome these limitations, this study proposes an improved YOLO11-based pig behavior detection model, termed DWEC-YOLO, for recognizing normal behaviors (standing, lying, sitting, and feeding) and aggressive behaviors (fighting, ear biting, and tail biting). First, the C3k2-DySnake module is embedded within the backbone architecture, enabling more effective extraction of fine-grained visual details. Second, an EUCB-SC module is employed during feature aggregation and works jointly with the CoordAtt mechanism to strengthen multi-scale feature representations, thereby enhancing the network's sensitivity toward critical interaction areas. In addition, Wise-ShapeIoU is adopted as the bounding-box regression loss to refine localization optimization and produce more accurate object predictions. Comprehensive experiments show that DWEC-YOLO surpasses several representative lightweight detectors, including YOLOv5n, YOLOv7-Tiny, YOLOv8n, YOLOv10n, and YOLOv12n, in detection effectiveness. Relative to the original YOLO11 architecture, DWEC-YOLO improves precision, recall, and mAP@0.5 by 4.28, 4.46, and 2.65 percentage points, respectively, achieving 96.17%, 95.25%, and 97.57%. These outcomes demonstrate that DWEC-YOLO substantially enhances multi-behavior detection in group-housed environments, serving as a dependable tool for automated monitoring in smart livestock farming.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":"16 19","pages":""},"PeriodicalIF":3.2,"publicationDate":"2026-10-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13663593/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149190602","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bridging Gaps in Panthera leo Ethograms: A Systematic Review and Adaptable Model for Animal Welfare Research. 弥合美洲豹特征图的差距:动物福利研究的系统回顾和适应性模型。
IF 3.2 2区 农林科学
Animals Pub Date : 2026-10-05 DOI: 10.3390/ani16193122
Débora Silvia Racciatti, Oriol Talló-Parra, Xavier Manteca, Carlos Blanco, Héctor Ricardo Ferrari
{"title":"Bridging Gaps in <i>Panthera leo</i> Ethograms: A Systematic Review and Adaptable Model for Animal Welfare Research.","authors":"Débora Silvia Racciatti, Oriol Talló-Parra, Xavier Manteca, Carlos Blanco, Héctor Ricardo Ferrari","doi":"10.3390/ani16193122","DOIUrl":"10.3390/ani16193122","url":null,"abstract":"<p><p>Lions (<i>Panthera leo</i>) are keystone predators and an iconic species for wildlife conservation. Understanding their behaviour is critical for effective conservation strategies and for ensuring animal welfare in human-managed environments. Ethograms-systematic descriptions of behavioural repertoires-are essential tools for observing, recording, and analysing animal behaviour. Although numerous ethograms have been developed for lions, the lack of standardization and variability in content hinder comparative research and welfare assessment. This study aimed to develop a comprehensive ethogram for lions, based on a systematic review of published sources (following PRISMA guidelines), critical examination of definitions, and video-based observations of captive individuals. As a result, we propose a new ethogram comprising 83 behavioural patterns grouped into 13 functional categories: affiliative (10), aggressive (2), agonistic (7), environment-directed (9), fear-related (2), feeding (9), locomotor (8), maintenance (5), marking (5), potentially stereotypic (7), reproductive (4), resting (7), and other behaviours (8). This ethogram is designed to be both comprehensive and adaptable, supporting its potential application across diverse research contexts, from behavioural monitoring to welfare evaluations. By advancing standardization in behavioural terminology and structure, this work provides a basis for more consistent and comparable data in ethological studies, ultimately supporting evidence-based decision-making in the management and welfare of captive lions.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":"16 19","pages":""},"PeriodicalIF":3.2,"publicationDate":"2026-10-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13663599/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149190750","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
T2SS Components GspJ, GspL, and GspM Regulate Virulence in Vibrio alginolyticus. T2SS成分GspJ、GspL和GspM调节溶藻弧菌毒力。
IF 3.2 2区 农林科学
Animals Pub Date : 2026-10-05 DOI: 10.3390/ani16193121
Le Zhang, Qiang Chen, Xiaojin Xu, Chunmei Zhang, Xufei Liu, Chengcheng Li, Lunrui Zhang, Yujin Xiao, Yuxuan Sha, Guiling Zhang, Yunong Chen, Pocheng Chen
{"title":"T2SS Components GspJ, GspL, and GspM Regulate Virulence in <i>Vibrio alginolyticus</i>.","authors":"Le Zhang, Qiang Chen, Xiaojin Xu, Chunmei Zhang, Xufei Liu, Chengcheng Li, Lunrui Zhang, Yujin Xiao, Yuxuan Sha, Guiling Zhang, Yunong Chen, Pocheng Chen","doi":"10.3390/ani16193121","DOIUrl":"10.3390/ani16193121","url":null,"abstract":"<p><p><i>Vibrio alginolyticus</i> is a major aquaculture pathogen whose virulence is largely mediated by the type II secretion system (T2SS). However, the functions of key T2SS components, including <i>gspJ</i>, <i>gspL</i>, and <i>gspM</i>, remain unclear. Earlier research indicated that a <i>Scutellaria baicalensis</i> extract at 8 mg/mL markedly suppressed the growth, motility, and biofilm-forming capacity of <i>V. alginolyticus</i> ND-01 (OD<sub>600</sub> = 0.5) following 12 h of treatment, with the resulting stress substantially altering the expression of multiple genes, including <i>gspJ</i>, <i>gspL</i>, and <i>gspM</i>. The <i>gspJ</i>-RNAi, <i>gspL</i>-RNAi, and <i>gspM</i>-RNAi strains were constructed using RNAi. Biological functional assays demonstrated that stable silencing of <i>gspJ</i>, <i>gspL</i>, and <i>gspM</i> markedly decreased biofilm formation ability (84.01%, 24.99%, and 78.26%, respectively) and host cell adhesion (73.57%, 75.65%, and 79.61%, respectively); <i>gspJ</i> and <i>gspM</i> silencing reduced motility (54.82% and 57.42%, respectively), whereas <i>gspL</i> silencing enhanced motility by 38.49%, indicating their essential roles in virulence-associated phenotypes. Notably, in vivo infection of <i>Epinephelus coioides</i> revealed that <i>gspL</i>-RNAi significantly attenuated pathogenicity, as evidenced by reduced host mortality (50%) and decreased bacterial colonization in liver and spleen tissues, compared with the wild-type group. Consistently, Label-Free Proteomic Analysis of the <i>gspL</i>-RNAi strain identified 189 differentially expressed proteins in the <i>gspL</i>-silenced strain, with enrichment in two-component signaling, ABC transport systems, and amino acid metabolism. Network analysis further positioned <i>gspL</i> as a central regulatory hub linking T2SS activity to signal transduction, transport, and metabolic pathways. In addition, the expression of <i>gspJ</i>-RNAi, <i>gspL</i>-RNAi, and <i>gspM</i>-RNAi exhibited distinct responses to environmental stresses, including pH and temperature variation. Collectively, our findings highlight that <i>gspJ</i>, <i>gspL</i>, and <i>gspM</i> are critical regulators of virulence in <i>V. alginolyticus</i>, with <i>gspL</i> playing a central role in coordinating T2SS function with global regulatory networks. This study advances our understanding of the pathogenic mechanisms of <i>V. alginolyticus</i> and provides potential targets for the development of anti-virulence aquaculture strategies.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":"16 19","pages":""},"PeriodicalIF":3.2,"publicationDate":"2026-10-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13663364/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149190825","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genomic Insights into Inbreeding, Population Structure, and Selection Signatures in Salem Black and Global Goat Breeds. 在塞勒姆黑山羊和全球山羊品种的近亲繁殖,种群结构和选择特征的基因组见解。
IF 3.2 2区 农林科学
Animals Pub Date : 2026-10-05 DOI: 10.3390/ani16193123
Oludayo Michael Akinsola, Malarmathi Muthusamy, Arun Kumar Chinnasamy, Chitra Ramasamy, Pritam Pal, Saravanan Ramasamy, Mani Jeyakumar, Imaben Grace Opaluwa-Kuzayed, Aranganoor Kannan Thiruvenkadan, Sunday Olusola Peters
{"title":"Genomic Insights into Inbreeding, Population Structure, and Selection Signatures in Salem Black and Global Goat Breeds.","authors":"Oludayo Michael Akinsola, Malarmathi Muthusamy, Arun Kumar Chinnasamy, Chitra Ramasamy, Pritam Pal, Saravanan Ramasamy, Mani Jeyakumar, Imaben Grace Opaluwa-Kuzayed, Aranganoor Kannan Thiruvenkadan, Sunday Olusola Peters","doi":"10.3390/ani16193123","DOIUrl":"10.3390/ani16193123","url":null,"abstract":"<p><p>The Salem Black goat is an indigenous Indian breed valued for its premium Black leather and high twinning rate, yet its genomic diversity and adaptive potential remain unexplored. We characterised genomic diversity, population structure, demographic history and selection signatures using whole-genome sequence data from 11 Salem Black goats (7 unrelated individuals retained after kinship filtering) analysed alongside 157 individuals from five global breeds (Red Sokoto/Maradi, Tanzania Toggenburg, Omani Jabal Akhdar, Pakistani Kachan and Madagascar Diana), yielding a final dataset of 120 unrelated animals and 36,584 autosomal SNPs. Genomic inbreeding was estimated via runs of homozygosity; population structure was assessed using principal component analysis, ADMIXTURE, phylogenetic reconstruction, and genetic differentiation. Historical effective population size was inferred, and selection signatures were identified using the de-correlated composite of multiple signals (DCMS) approach. Salem Black goats showed the highest genomic inbreeding (FROH = 0.41), lowest observed heterozygosity (9.6%), and smallest recent effective population size (Ne≈15), indicating severe recent inbreeding and genetic erosion. Population structure analyses identified Salem Black as a distinct lineage most closely related to Pakistani Kachan goats. Significant selection signals emerged only in Madagascar Diana, Omani Jabal Akhdar, and Tanzania Toggenburg goats, highlighting genes linked to heat tolerance, immunity, DNA repair, metabolism, and reproduction. These findings provide the first genomic characterization of Salem Black goats and identify their urgent conservation priority.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":"16 19","pages":""},"PeriodicalIF":3.2,"publicationDate":"2026-10-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13663511/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149190883","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
FGF7 Polymorphisms, Especially Chr7:57803771:C>T, are Associated with Lambskin Traits in Hu Sheep. FGF7多态性与湖羊羔羊皮性状相关,尤其是Chr7:57803771:C>T多态性。
IF 3.2 2区 农林科学
Animals Pub Date : 2026-10-05 DOI: 10.3390/ani16193126
Kebede Habtegiorgis Beshah, Jing Xie, Daxiang Wang, Bingru Zhao, Muhammad Tariq, Abdul Quddus, Dagan Mao
{"title":"FGF7 Polymorphisms, Especially Chr7:57803771:C>T, are Associated with Lambskin Traits in Hu Sheep.","authors":"Kebede Habtegiorgis Beshah, Jing Xie, Daxiang Wang, Bingru Zhao, Muhammad Tariq, Abdul Quddus, Dagan Mao","doi":"10.3390/ani16193126","DOIUrl":"10.3390/ani16193126","url":null,"abstract":"<p><p>Lambskin quality is an economically important trait in Hu sheep (<i>Ovis aries</i>), with wool-pattern characteristics contributing substantially to commercial value. However, the genetic basis of lambskin variation remains incompletely understood. This study evaluated single nucleotide polymorphisms (SNPs) in four candidate genes involved in hair follicle development, <i>FGF7</i>, <i>FGFR2</i>, <i>SMAD5</i>, and <i>SOSTDC1</i>, in 384 Hu sheep using Sequenom MassARRAY<sup>®</sup> technology. Allele and genotype frequencies, heterozygosity, polymorphism information content (<i>PIC</i>), and Hardy-Weinberg equilibrium (HWE) were assessed, followed by association analyses with categorical and quantitative lambskin traits. A total of 18 polymorphic SNPs were successfully genotyped. Three <i>FGF7</i> SNPs showed significant associations with lambskin traits, with all corresponding significant allelic associations remaining significant after false discovery rate (FDR) correction. For Oar_v4.0:Chr7:57803771:C>T, the C-allele frequency increased from 0.30 in straight-wool individuals to 0.53 in fully wavy-wool individuals, and the C allele was associated with higher odds of the fully wavy phenotype (OR = 2.70, 95% CI: 1.56-4.68). This locus was also significantly associated with pattern area and lambskin grade, whereas Oar_v4.0:Chr7:57740946:G>A and Oar_v4.0:Chr7:57741376:T>G were associated with pattern area and pattern width. <i>SMAD5</i> variants showed nominal associations with some traits but did not remain significant after FDR correction, whereas <i>FGFR2</i> showed no significant associations and <i>SOSTDC1</i> showed a nominal genotype association with lambskin grade. Protein-protein interaction analysis further placed <i>FGF7</i> within a network involving signaling proteins related to epithelial proliferation and hair follicle development. Collectively, these findings identify the <i>FGF7</i> region, particularly Oar_v4.0:Chr7:57803771:C>T, as the strongest candidate signal associated with lambskin variation in Hu sheep.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":"16 19","pages":""},"PeriodicalIF":3.2,"publicationDate":"2026-10-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13663528/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149190764","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Estimating Fish Body Weight from Morphological Features Using Some Data Mining Algorithms. 利用一些数据挖掘算法从形态特征估计鱼类体重。
IF 3.2 2区 农林科学
Animals Pub Date : 2026-10-05 DOI: 10.3390/ani16193124
Şenol Çelik, Abdulmojeed Yakubu, Alina Makarenko, Ruslan Kononenko, Iryna Kononenko, Andriy Getya, Mykhailo Matvieiev, Nataliia Hryshchenko, Galia Zamaratskaia
{"title":"Estimating Fish Body Weight from Morphological Features Using Some Data Mining Algorithms.","authors":"Şenol Çelik, Abdulmojeed Yakubu, Alina Makarenko, Ruslan Kononenko, Iryna Kononenko, Andriy Getya, Mykhailo Matvieiev, Nataliia Hryshchenko, Galia Zamaratskaia","doi":"10.3390/ani16193124","DOIUrl":"10.3390/ani16193124","url":null,"abstract":"<p><p>The objective was to compare the performance of various data mining algorithms in estimating the body weight of fish. The effects of age, farm type and body morphological characteristics on the body weight of the hybrid silver carp (<i>Hypophthalmichthys</i> spp.) were analyzed using some data mining methods. The body weight of the fish was predicted using different morphological measurements taken during its lifetime and after slaughter. Prediction performances of the Chi-Squared Automatic Interaction Detector (CHAID), Classification and Regression Trees (CART), Artificial Neural Networks (ANN), Random Forest (RF), and Multivariate Adaptive Regression Splines (MARS) algorithms were compared. The prediction capabilities of the fitted models were assessed using model fit statistics. The MARS algorithm was demonstrated to be the most effective model for characterizing body weight. Body length showed the greatest relative importance among all traits measured during the fish's lifetime. When the body length of fish exceeds 145 mm, the body weight is expected to reach 173 g. The MARS algorithm is the most effective model for predicting the body weight of fish, based on the experimental data. It provides an excellent alternative to existing data mining techniques.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":"16 19","pages":""},"PeriodicalIF":3.2,"publicationDate":"2026-10-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13663363/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149190796","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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