{"title":"Conformational Stability of 3-aminopropionitrile: DFT and Ab initio Calculations.","authors":"Ashraf Al Msiedeen","doi":"10.17344/acsi.2023.8486","DOIUrl":"https://doi.org/10.17344/acsi.2023.8486","url":null,"abstract":"<p><p>Many conformers of 3-aminopropionitrile are known. Due to the biomedical importance of 3-aminopropionitrile a full investigation of structural, vibrational, and other associated properties of all possible conformers was performed. The geometrical structures, relative stability, and vibrational frequencies of the gauche and trans 3-aminopropionitrile conformers have been studied using ab initio (CCSD/6-311+G(d,p)) and DFT (B3LYP and M06 functionals at 6-311+G(d,p) and aug-cc-pVDZ basis set) calculations. The conformational and vibrational studies of 3-aminopropionitrile molecule were presented here are in very good interpretation of the calculated data compared with very poor interpretation in previous studies. The results showed that the gauche 2 conformer is more stable by 0.19 kcal/mol than gauche 1, outlined as enthalpy change ΔH between the conformers, at CCSD/6-311+G(d,p). Additionally, the population analysis shows that the gauche conformers are more prevalent than the trans conformers in the gas phase, present at 72.8%, with gauche 2 being the dominating gauche conformer at 40.1%. These results are in good agreement with earlier experimental and theoretical conclusions. All minima conformers' thermodynamic characteristics have also been studied. The relevant bond lengths, bond angles, and dihedral angles were calculated at a different level of theory for all possible conformers. The geometrical outcomes of the conformers agree very well with the previous experimental results. Electrostatic potential surface (ESP) has been used to interpret the structure-activity relationship. The atomic charges are examined, together with the energy difference between HOMO (Highest Occupied Molecular Orbital) and LUMO (Lowest Unoccupied Molecular Orbital). Additionally, the HOMO-LUMO energy gap and other relevant molecular properties are computed. The most stable conformers' stabilization energy has been determined by the Natural Bond Orbital (NBO) analysis.</p>","PeriodicalId":7122,"journal":{"name":"Acta Chimica Slovenica","volume":"71 2","pages":"244-255"},"PeriodicalIF":1.2,"publicationDate":"2024-04-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141449334","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Synthesis, Crystal Structures and Urease Inhibition of Copper(II) and Zinc(II) Complexes Derived from N,N'-Bis(4-bromosalicylidene)-1,3-propanediamine.","authors":"Hai-Ying Chen, Rundong Lu, Jinkai Lei, Jiacheng Liu, Chi Liu, Liuxiu Chen, Wu Chen","doi":"10.17344/acsi.2024.8640","DOIUrl":"https://doi.org/10.17344/acsi.2024.8640","url":null,"abstract":"<p><p>A new tetranuclear copper(II) complex [Cu4L2(N3)2(CH3OH)2](NO3)2·4CH3OH (1) and a new trinuclear zinc(II) complex [Zn3L2(CH3COO)2] (2) have been prepared from the bis-Schiff base N,N'-bis(4-bromosalicylidene)-1,3-propanediamine (H2L) with copper nitrate and zinc acetate, respectively, in the presence of sodium azide. The complexes were characterized by elemental analysis, IR and UV-Vis spectroscopy. Molecular structures of both complexes were confirmed by single crystal X-ray determination. The Cu(II) atoms in complex 1 are bridged by phenolate oxygen atoms and end-on azide ligands. The Zn(II) atoms in complex 2 are bridged by phenolate oxygen atoms and acetate ligands. The Cu(II) atoms in complex 1 are in square planar and square pyramidal coordination. The Zn(II) atoms in complex 2 are in square pyramidal and octahedral coordination. The Schiff base ligand coordinates to the metal atoms through two phenolate O and two imino N atoms. The biological assay reveals that the copper(II) complex has effective urease inhibition.</p>","PeriodicalId":7122,"journal":{"name":"Acta Chimica Slovenica","volume":"71 2","pages":"236-243"},"PeriodicalIF":1.2,"publicationDate":"2024-04-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141449270","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Extraction and characterization of nanocellulose from waste of date palm \"Phoenix dactylifera″ as reinforcement of polymer composites.","authors":"Nebia Bouzidi, Meriem Kadri, Toufik Chouana, Hakim Belkhalfa, Abdellah Henni, Youcef Bouhadda","doi":"10.17344/acsi.2023.8517","DOIUrl":"https://doi.org/10.17344/acsi.2023.8517","url":null,"abstract":"<p><p>The cellulose is the most abundant and renewable polymer in nature. It is characterized by its biodegradability that can help to establish a friendly environment. The main objective of this study is intended to characterize the nanocellulose obtained from waste date palm, including the dried palms (DP) and the fresh palms (FP) by implementing chemical methods (hydrolysis with H2SO4). Physical properties, morphology, the elemental composition and the thermal stability were determined by Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), zeta sizer, scanning electron microscopy (SEM), whereas energy dispersive X-ray (EDX) and thermogravimetric analysis (TGA), respectively. FTIR, SEM and EDX results, revealed the effective removal of impurities, hemicellulose and lignin. Palm sample residues contained 35.99% of cellulose and 33.12% of cellulose nanocrystals (CNC) for DP, and 36.17% of cellulose and 34.35% of CNC for FP. The CNCs have higher crystallinity than the raw fibers and Zeta sizer was between 25 and 1150 nm. TGA analysis showedthat DP exhibited greater thermal resistance.</p>","PeriodicalId":7122,"journal":{"name":"Acta Chimica Slovenica","volume":"71 2","pages":"186-196"},"PeriodicalIF":1.2,"publicationDate":"2024-04-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141449256","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ana Maria Toader, Petruta Oancea, Izabella Dascalu, Mirela Enache
{"title":"Insight into the interaction of quinizarin with SDS micelles - effects of additives.","authors":"Ana Maria Toader, Petruta Oancea, Izabella Dascalu, Mirela Enache","doi":"10.17344/acsi.2023.8539","DOIUrl":"10.17344/acsi.2023.8539","url":null,"abstract":"<p><p>Association behavior between quinizarin (1,4-dihydroxyanthraquinone), an analogue of the chromophore of anthracycline anticancer drugs and sodium dodecyl sulfate (SDS) micelles in the presence of glucose, NaCl and urea additives was studied using absorption spectroscopy and conductometric techniques. The spectral results indicate an increase of binding constant and partition coefficient values in the presence of glucose and NaCl whereas the addition of urea leads to a decrease of binding strength and quinizarin partitioning into SDS micelles. Thus, the rise of NaCl and glucose concentrations is favorable for the quinizarin distribution into SDS micelles. From electrical conductivity measurements it was found that the critical micelle concentration (CMC) of SDS/quinizarin system decreases by adding NaCl and glucose whereas urea has not influence on the micelization process at the concentrations used in the present study. Since biologically compounds like glucose, NaCl and urea are found in the human body, the attained outcomes can be important in finding of effective drug delivery systems.</p>","PeriodicalId":7122,"journal":{"name":"Acta Chimica Slovenica","volume":"71 2","pages":"197-203"},"PeriodicalIF":1.2,"publicationDate":"2024-04-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141449259","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Effects of the extraction conditions on functional and structural characteristics of proteins from fenugreek seeds.","authors":"Hilal Isleroglu, Gamze Nur Olgun","doi":"10.17344/acsi.2023.8576","DOIUrl":"10.17344/acsi.2023.8576","url":null,"abstract":"<p><p>The aim of this study is to optimize the extraction process and characterize the proteins found in fenugreek seeds. The water and oil holding capacities, coagulated protein content, foaming and emulsification properties of the isolated proteins at all extraction conditions were investigated. Also, solubility, molecular weights, structural and thermal properties were determined. In the extraction processes carried out at different pHs (pH 6.0-12.0) and solid:solvent ratios (20-60 g/L), it was determined that the highest extraction yield (94.3±0.3%) was achieved when the pH was 11.47 and the solid-solvent ratio was 34.50 g/L. Three distinct bands (46, 59 and 80 kDa) in the range of 22-175 kDa were determined for the fenugreek seed protein isolate obtained at optimum extraction conditions. Protein secondary structures were achieved using Fourier Transform Infrared (FT-IR) spectra and it was determined that β-sheet structures were highly present. In addition, denaturation temperatures and denaturation enthalpy were calculated as ~119°C and 28 mJ/g, respectively.</p>","PeriodicalId":7122,"journal":{"name":"Acta Chimica Slovenica","volume":"71 2","pages":"204-214"},"PeriodicalIF":1.2,"publicationDate":"2024-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141449254","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Füsun Göktaş, Gizem Nur Duran, Mehmet Özbil, Özge Soylu-Eter, Nilgün Karalı
{"title":"1H-Indole-2,3-dione 3-thiosemicarbazones carrying a 4-sulfamoylphenyl moiety with selective antiviral activity against reovirus-1.","authors":"Füsun Göktaş, Gizem Nur Duran, Mehmet Özbil, Özge Soylu-Eter, Nilgün Karalı","doi":"10.17344/acsi.2023.8589","DOIUrl":"10.17344/acsi.2023.8589","url":null,"abstract":"<p><p>1H-indole-2,3-dione 3-[4-(4-sulfamoylphenyl)thiosemicarbazones] (6a-j) were evaluated against Para-influenza-3, Reovirus-1, Sindbis, Coxsackie B4 and Punto Toro viruses. New 1-methyl-1H-indole-2,3-dione 3-[4-(4-sulfamoylphenyl)thiosemicarbazones] (7a-c) were synthesized to evaluate the contribution of methyl substitution at position 1- of the indole ring to antiviral activity. The test results showed that compounds 5-trifluoromethoxy- substituted 6c (EC50: 2-9 µM) and 5-bromo- substituted 6f (EC50: 2-3 µM) have non-toxic selective antiviral activity while not all standards are active against Reovirus-1. Molecular docking studies of 6c and 6f were carried out to determine the possible binding positions with Reovirus-1. Trifluoromethoxy and bromine substitutions at position 5- of the indole ring provided selective antiviral activity, while methyl substitution at position 1- of the indole ring significantly decreased the activity and increased toxicity against Reovirus-1.</p>","PeriodicalId":7122,"journal":{"name":"Acta Chimica Slovenica","volume":"71 2","pages":"215-225"},"PeriodicalIF":1.2,"publicationDate":"2024-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141449330","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Kristina Tot, Anita Lazić, Tatjana Djaković Sekulić
{"title":"QSRR modeling of lipophilicity of new spirohydantoin derivatives determined with various TLC systems.","authors":"Kristina Tot, Anita Lazić, Tatjana Djaković Sekulić","doi":"10.17344/acsi.2023.8602","DOIUrl":"10.17344/acsi.2023.8602","url":null,"abstract":"<p><p>A Quantitative structure-retention relationship (QSRR) analysis has been carried out on the chromatography parameters of lipophilicity of selected spirohydantoins. Multiple linear regression (MLR) was applied for construct the QSRR models. The chromatographic parameters of lipophilicity were determined by reversed-phase thin-layer chromatography. Chromatographic analyses were performed on C-18 modified silica gel with a two-component mobile phase consisting of water and protic organic solvent (ethanol, n-propanol, i-propanol, or t-butanol) in different ratios. QSRR models were built and for additional four aqueous mobile phases: acetone-water, acetonitrile-water, tetrahydrofuran-water, and 1,4-dioxane-water (results published before). In total, chromatographic lipophilicity parameters obtained for two types of organic solvents was subject of the QSRR. The predictive ability of each model was defined by an internal validation coefficient. The best QSRR model for predicting the chromatographic parameter of lipophilicity was obtained for tetrahydrofuran as an organic solvent.</p>","PeriodicalId":7122,"journal":{"name":"Acta Chimica Slovenica","volume":"71 2","pages":"226-235"},"PeriodicalIF":1.2,"publicationDate":"2024-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141449263","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"DRUŠTVENE VESTI IN DRUGE AKTIVNOSTI SOCIETY NEWS, ANNOUNCEMENTS, ACTIVITIES.","authors":"","doi":"","DOIUrl":"","url":null,"abstract":"","PeriodicalId":7122,"journal":{"name":"Acta Chimica Slovenica","volume":"70 4","pages":"S117-S131"},"PeriodicalIF":1.2,"publicationDate":"2023-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138827650","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"70th anniversary of Acta Chimica Slovenica.","authors":"Franc Perdih","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Dear readers of Acta Chimica Slovenica, In this year Acta Chimica Slovenica, the journal published by Slovenian Chemical Society, is celebrating 70th anniversary.</p>","PeriodicalId":7122,"journal":{"name":"Acta Chimica Slovenica","volume":"70 4","pages":"E1-E6"},"PeriodicalIF":1.2,"publicationDate":"2023-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138827644","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Synthesis of Novel cis-2-Azetidinones from imines and aclychloride using triethylamine.","authors":"Handan Can Sakarya, Aslı Ketrez","doi":"10.17344/acsi.2023.8451","DOIUrl":"https://doi.org/10.17344/acsi.2023.8451","url":null,"abstract":"<p><p>A novel series of cis-2-azetidinones 2(a-c ) was carried out by the cyclo addition reaction of imine 1(a-c ) and acyl chloride in dry dichloromethane at 0-5 oC using triphenylamine. The cyclo addition of the Schiff bases with chloroacetyl chloride resulted corresponding major product cis-2-azetidinone stereoisomers 2(a-c). The synthesized compounds were characterized by analytical and spectral (Infrared, 1H NMR, 13C NMR, and elemental analysis) data. Keywords: Benzothiazole, β-lactam, Schiff base, cis-2-azetidinone, Staudinger reaction Acknowledgements The authors would like to thank the Eskişehir Osmangazi University Scientific Research Projects Council for financial support (Project No: 2014/19A208). References • C. M. L. Delpiccolo, M. A. Fraga, E. G. Mata, J. Comb. Chem. 2003, 5, 208-210. DOI: 10.1021/cc020107d. • R. B. Pawar, V. V. Mulwad, Chem. Heterocycl. Compd. 2004, 40, 219-226. DOI: 10.1023/B:COHC.0000027896.38910.d1. • P. D. Mehta, N. P. S. Sengar, A. K. Pathak, Eur. J. Med. Chem. 2010, 45, 5541-5560. DOI: 10.1016/j.ejmech.2010.09.035. • G. S. Singh, B. J. Mmolotsi, Il Farmaco, 2005, 60, 727-730. DOI: 10.1016/j.farmac.2005.06.008. • C. D. Risi, G. P. Pollini, A. C. Veronese, V. Bertolasi, Tetrahedron Lett. 1999, 40, 6995-6998. DOI: 10.1016/S0040-4039(99)01421-5. • H. G. I. Georg: The Organic Chemistry of β-Lactams, Weinheim/VCH Publishers, New York, 1993, p. 295. DOI: 10.1002/ange.19941060738. • R. F. Abdulla, K. H. Fuhr, J. Med. Chem. 1975, 18, 625-627. DOI: 10.1021/jm00240a022. • W. Dürckheimer, J. Blumbach, R. Lattrell, K. H. Scheunemann, Angew. Chem. Int. Ed. Engl. 1985, 24, 180-202. DOI: 10.1002/anie.198501801. • P. D. Mehta, N. P. S. Sengar, A. K. Pathak, Eur. J. Med. Chem. 2010, 45, 5541-5560. DOI: 10.1016/j.ejmech.2010.09.035. • H. Staudinger, Justus Liebigs Ann. Chem. 1907, 356, 51-123. DOI: 10.1002/jlac.19073560106. • A. K. Bose, M. Jayaraman, A. Okawa, S. S. Bari, E. W. Robb, M. S. Manhas, Tetrahedron Lett. 1996, 37, 6989-6992. DOI: 10.1016/0040-4039(96)01571-7. • A. K. Bose, B. K. Banik, M. S. Manhas, Tetrahedron Lett. 1995, 36, 213-216. DOI: 10.1016/0040-4039(94)02225-Z. • A. Arrieta, B. Lecea, F. P. Cossio, J. Org. Chem. 1998, 63, 5869-5876. DOI: 10.1021/jo9804745. • P. Vicini, A. Geronikaki, M. Incerti, B. Busonera, G. Poni, C. A. Cabras, P. L. Colla, Bioorg. Med. Chem. 2003, 11, 4785-4789. DOI: 10.1016/S0968-0896(03)00493-0. • K. Mogilaiah, R. B. Rao, K. N. Reddy, Indian J. Chem. 1999, 38B, 818-822. • 16. I. Georg, V. T. G. I. Ravikumar, Ed. Verlag Chemie, 1993, 295- 368 New York, • L. Jiao, Y. Liang, J. Xu. J. Am. Chem. Soc. 2006, 128, 6060- 6069 • H. C. Sakarya, M. Yandımoğlu, Croat. Chem. Acta, 2018, 91, 533-541. DOI: 10.5562/cca3386. • D. A. Nelson, J. Org. Chem. 1972, 37, 1447-1449. DOI: 10.1021/jo00974a038. • K. D. Barrow, T. M. Spotswood, Tetrahedron Lett. 1965, 6, 3325-3335. DOI: 10.1016/S0040-4039(01)89203-0. • J. Decazes, J. L. Luche, H. B, Kagan, Tetrahedron Lett. 1970, 11, 3665-3668. DOI: 10.1016/S0040","PeriodicalId":7122,"journal":{"name":"Acta Chimica Slovenica","volume":"70 4","pages":"628-633"},"PeriodicalIF":1.2,"publicationDate":"2023-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138827569","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}