Biodegradation最新文献

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Biodegradation of polyethylene by indigenous soil bacteria isolated from municipal landfill sites of Mangaluru 曼格鲁鲁城市垃圾填埋场中分离的原生土壤细菌对聚乙烯的生物降解
IF 4.2 4区 生物学
Biodegradation Pub Date : 2026-09-12 DOI: 10.1007/s10532-026-10369-9
Mallesh Abhishek, Saloni Prabhakar, Ramya Harsha
{"title":"Biodegradation of polyethylene by indigenous soil bacteria isolated from municipal landfill sites of Mangaluru","authors":"Mallesh Abhishek,&nbsp;Saloni Prabhakar,&nbsp;Ramya Harsha","doi":"10.1007/s10532-026-10369-9","DOIUrl":"10.1007/s10532-026-10369-9","url":null,"abstract":"<div><p>Polyethylene (PE) is a widely used synthetic polymer whose resistance to degradation poses a significant environmental challenge. In this study, landfill soils from municipal waste disposal sites in Mangaluru, India, were explored as potential sources of PE-degrading bacteria. Bacterial isolates were screened for their ability to utilize PE as a carbon source, and selected isolates were evaluated for degradation-related activity. Among the tested isolates, the highest PE weight reduction observed after 30 days was 15.38%. Physicochemical characterization of PE films revealed structural alterations, oxidative functional group formation, and surface damage following bacterial treatment. In addition, the laccase assay indicated a significant increase in the enzyme activity during the study period, highlighting the involvement of oxidative pathways. Among the PE-degrading genes screened, <i>alkB</i> was detected in all tested isolates. Molecular identification based on 16S rRNA gene sequencing revealed four bacterial species, among which <i>Escherichia fergusonii</i> and <i>Leclercia adecarboxylata</i> are reported for the first time as PE degraders. Overall, the findings highlight landfill environments as reservoirs of metabolically diverse microorganisms with potential relevance for future plastic biodegradation and bioremediation studies. Further studies focusing on enzymatic mechanisms and process optimization are essential to enhance biodegradation efficiency and enable large-scale applications.</p></div>","PeriodicalId":486,"journal":{"name":"Biodegradation","volume":"37 5","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148927871","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Enhancing vinasse biodegradability through ozonation: a response surface approach toward biogas-oriented wastewater valorization 通过臭氧化提高酒糟的生物降解性:面向沼气的废水增值的响应面方法
IF 4.2 4区 生物学
Biodegradation Pub Date : 2026-09-10 DOI: 10.1007/s10532-026-10365-z
Valentine Conny Putri Perdana, Suherman Suherman, Tubagus Rayyan Fitra Sinuhaji
{"title":"Enhancing vinasse biodegradability through ozonation: a response surface approach toward biogas-oriented wastewater valorization","authors":"Valentine Conny Putri Perdana,&nbsp;Suherman Suherman,&nbsp;Tubagus Rayyan Fitra Sinuhaji","doi":"10.1007/s10532-026-10365-z","DOIUrl":"10.1007/s10532-026-10365-z","url":null,"abstract":"<div><p>Vinasse, a byproduct of the ethanol industry, poses significant challenges for anaerobic digestion due to its high concentration of recalcitrant phenolic compounds and its tendency to generate excessive foam, which destabilizes reactor hydrodynamics. This study introduces a methodologically transparent approach to pretreating vinasse for anaerobic digestion. While ozonation and polydimethylsiloxane (PDMS) antifoam are established individually, their combined application for processing highly recalcitrant agro-industrial wastewater requires precise control. PDMS was introduced as an operational prerequisite to suppress severe foaming and physically prevent reactor overflow. With physical stability maintained, Response Surface Methodology (RSM) via a central composite design (CCD) was employed to mathematically optimize the critical chemical process variables—pH, ozone flow rate, and contact time—to detoxify the substrate without inhibiting downstream microbial activity The results indicated that ozonation significantly enhanced biodegradability, with the optimal conditions determined at pH 4.0, an ozone flow rate of 2.0 L/min, and a contact time of 90 min. Under these conditions, the treatment achieved high removal efficiencies for COD and phenolic compounds while reducing the carbon-to-nitrogen (C/N) ratio to 16.7, thereby altering the substrate balance before final nutrient adjustment for methanogenesis. Validation experiments confirmed that the operationally stabilized ozonation process increased the methane yield to 0.22 L CH<sub>4</sub>/g COD, a 37.5% increase over untreated vinasse (0.16 L CH<sub>4</sub>/g COD). These findings demonstrate that integrating PDMS with ozonation shows strong lab-scale potential to overcome the mechanical and chemical barriers inherent in processing high-strength agro-industrial wastewater, warranting further pilot-scale engineering studies.</p><h3>Graphical abstract</h3>\u0000<div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":486,"journal":{"name":"Biodegradation","volume":"37 5","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148927370","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Microalgae-mediated treatment of pharmaceutical contaminants: degradation pathways, advance system design, and priority research needs 微藻介导的药物污染物处理:降解途径,先进的系统设计和优先研究需求。
IF 4.2 4区 生物学
Biodegradation Pub Date : 2026-09-08 DOI: 10.1007/s10532-026-10360-4
Muhammad Waseem, Muhammad Tayyab Arshad, Fahad Rahul, Humaira Parveen, Sayeed Mukhtar, Mohammad Oves
{"title":"Microalgae-mediated treatment of pharmaceutical contaminants: degradation pathways, advance system design, and priority research needs","authors":"Muhammad Waseem,&nbsp;Muhammad Tayyab Arshad,&nbsp;Fahad Rahul,&nbsp;Humaira Parveen,&nbsp;Sayeed Mukhtar,&nbsp;Mohammad Oves","doi":"10.1007/s10532-026-10360-4","DOIUrl":"10.1007/s10532-026-10360-4","url":null,"abstract":"<div><p>Pharmaceutical residues are increasingly detected in freshwater systems at concentrations ranging from g/L to /L, raising concerns due to their persistence, bioactivity, and potential ecological and human health impacts. Conventional wastewater treatment plants typically achieve limited removal efficiencies (often 30–60% for many compounds such as carbamazepine and diclofenac), necessitating alternative treatment strategies. This review critically evaluates microalgae-based pond and consortia systems, emphasizing the key removal pathways of bioadsorption (10–40%), bioaccumulation (up to 20–30%), and biodegradation (40–90%, compound and condition dependent). It further examines microalgal physiological responses, including oxidative stress regulation, enzymatic transformation, and adaptive metabolic shifts under pharmaceutical exposure, which influence treatment performance. Major operational constraints, including seasonal variability, affect productivity and toxicity thresholds that inhibit algal growth at elevated contaminant concentrations. Recent advances in strain engineering, co-culture consortia, and process optimization have demonstrated removal efficiencies exceeding 80% under optimized conditions. Moreover, this review provides a systematic synthesis of mechanistic pathways, integrates recent process innovations, and identifies critical knowledge gaps related to by-product toxicity, scale-up stability, and long-term system performance, offering a more quantitative and application-oriented perspective on microalgae-based pharmaceutical removal.</p><h3>Graphical abstract</h3>\u0000<div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":486,"journal":{"name":"Biodegradation","volume":"37 5","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-09-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148910471","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Decoding next-generation heavy metal bioremediation via species-specific Earthworm and its gut microbiome interactions: insights from molecular responses, multi-omics, synthetic biology, and artificial intelligence 通过物种特异性蚯蚓及其肠道微生物组相互作用解码下一代重金属生物修复:来自分子反应,多组学,合成生物学和人工智能的见解。
IF 4.2 4区 生物学
Biodegradation Pub Date : 2026-09-08 DOI: 10.1007/s10532-026-10367-x
Inrikynti Mary Kharmawphlang, María Gómez-Brandón, Nazneen Hussain
{"title":"Decoding next-generation heavy metal bioremediation via species-specific Earthworm and its gut microbiome interactions: insights from molecular responses, multi-omics, synthetic biology, and artificial intelligence","authors":"Inrikynti Mary Kharmawphlang,&nbsp;María Gómez-Brandón,&nbsp;Nazneen Hussain","doi":"10.1007/s10532-026-10367-x","DOIUrl":"10.1007/s10532-026-10367-x","url":null,"abstract":"<div><p>Heavy metal (HM) contamination represents a persistent global threat, demanding bioremediation strategies that are both mechanistically robust and ecologically sustainable. This review provides a next-generation perspective on vermiremediation by integrating species-level physiology, gut microbiome functionality, molecular detoxification pathways, synthetic biology innovations, multi-omics insights, and artificial intelligence (AI)-driven modeling into a unified framework. A central novelty of this work lies in the detailed elucidation of earthworm-microbe consortia and their synergistic contributions to metal sequestration, transformation, and detoxification-moving beyond traditional organism-centric views toward eco-engineered host-symbiont systems. We synthesize species-specific bioaccumulation patterns, toxicological responses, and detoxification mechanisms, supported by enrichment kinetic models. At the molecular scale, we highlight antioxidant defense pathways involving catalase, glutathione-S-transferase, and superoxide dismutase, alongside oxidative stress signaling, macromolecular damage, and thresholds that differentiate adaptive resilience from system failure. Advancements in synthetic biology includes gene editing, pathway reconstruction, and designer symbiotic microbes which are examined as emerging tools to enhance gut microbial functionality and engineer targeted metal-binding pathways. Multi-omics approaches provide a systems-level view of detoxification networks, revealing previously uncharacterized genes, enzymes, and metabolic signatures associated with HM tolerance and early biomarkers of sub-lethal stress. The incorporation of AI-based models introduces a data-driven dimension, enabling accurate prediction of remediation outcomes and optimization of vermiremediation strategies. Overall, this review advances vermiremediation from an empirical practice to a programmable, systems-biotechnology platform for sustainable HM bioremediation.</p></div>","PeriodicalId":486,"journal":{"name":"Biodegradation","volume":"37 5","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-09-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148910431","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Efficient removal of Ni, Al, and As from water using Micrococcus yunnanensis: batch experiments and explainable machine learning 使用云南微球菌从水中高效去除Ni, Al和As:批量实验和可解释的机器学习。
IF 4.2 4区 生物学
Biodegradation Pub Date : 2026-09-07 DOI: 10.1007/s10532-026-10371-1
Aysel Alkan Uçkun, Şeyma Akkurt, Muhammed Kerim Solmaz, Miraç Uçkun
{"title":"Efficient removal of Ni, Al, and As from water using Micrococcus yunnanensis: batch experiments and explainable machine learning","authors":"Aysel Alkan Uçkun,&nbsp;Şeyma Akkurt,&nbsp;Muhammed Kerim Solmaz,&nbsp;Miraç Uçkun","doi":"10.1007/s10532-026-10371-1","DOIUrl":"10.1007/s10532-026-10371-1","url":null,"abstract":"<div><p>In this study, a bacterial strain of <i>Micrococcus yunnanensis</i> was isolated from the discharge water of an organized industrial zone wastewater treatment plant and used in the bioremoval of Al, Ni, and As. The effects of different experimental conditions such as initial metal concentration, pH, temperature, contact time, and biomass concentration on metal bioremoval were evaluated, and peak removal conditions were identified. The highest removal rates were 80, 68, and 27.33% for Al, Ni, and As, respectively. The isotherm and kinetic results for all metals showed that they fit the non-linear Langmuir and pseudo-second-order models, respectively. Ten representative machine-learning algorithms from linear, tree-based, ensemble, kernel, instance-based, and neural-network approaches were comparatively evaluated using a combined multi-metal dataset. The Extra Trees model was found to exhibit the best generalization performance (CV R<sup>2</sup> = 0.948; test R<sup>2</sup> = 0.941; RMSE = 5.98; and MAE = 4.553). To improve the interpretability of the results, SHAP analysis was performed, and the most important parameters were identified as metal type, initial metal concentration, and contact time, respectively. Of the two different training strategies followed in our study, models trained with a complete metal dataset were shown to be more successful than models trained with subsets containing each metal separately. This study contributes to the growing application of explainable machine learning in bioremoval research by integrating an environmentally isolated <i>M. yunnanensis</i> strain with a unified multi-metal predictive framework for Ni, Al, and As bioremoval.</p></div>","PeriodicalId":486,"journal":{"name":"Biodegradation","volume":"37 5","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-09-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148904874","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Statistical optimization and ecotoxicological assessment of carbofuran degradation by earthworm gut-associated Bacillus paralicheniformis PPH2 蚯蚓肠道相关副苔藓芽孢杆菌PPH2降解呋喃的统计优化和生态毒理学评价。
IF 4.2 4区 生物学
Biodegradation Pub Date : 2026-09-07 DOI: 10.1007/s10532-026-10370-2
Puspendu Shit, Harekrishna Jana, Partha Pratim Chakravorty, Priyanka Sarangi, Payel Sur, Samiran Sona Gauri, Yuji Sakai
{"title":"Statistical optimization and ecotoxicological assessment of carbofuran degradation by earthworm gut-associated Bacillus paralicheniformis PPH2","authors":"Puspendu Shit,&nbsp;Harekrishna Jana,&nbsp;Partha Pratim Chakravorty,&nbsp;Priyanka Sarangi,&nbsp;Payel Sur,&nbsp;Samiran Sona Gauri,&nbsp;Yuji Sakai","doi":"10.1007/s10532-026-10370-2","DOIUrl":"10.1007/s10532-026-10370-2","url":null,"abstract":"<div><p>The environmental persistence of carbofuran, a potent methylcarbamate neurotoxin, necessitates the development of advanced biotechnological strategies to safeguard soil biodiversity. This study investigated the bioremediation potential of <i>Bacillus paralicheniformis</i> PPH2, a specialized symbiont isolated from a unique ecological niche, the gastrointestinal tract of the indigenous paddy field earthworm <i>Glyphidrilus</i> sp. Unlike traditional soil isolates, strain PPH2 exhibited superior metabolic resilience, growing on carbofuran as the sole carbon and energy source. Through Central Composite Design coupled with Response Surface Methodology, catabolic efficiency was optimized at pH 7.1, 34.7 °C, and 100 rpm, resulting in a validated degradation efficiency of 62.07 ± 1.12% within 120 h. LC–MS/MS analysis revealed the putative identification of carbofuran phenol (m/z 164.36) as the primary biotransformation intermediate, indicating that strain PPH2 likely initiates hydrolytic cleavage of the toxicophoric methylcarbamate ester bond. While the achieved biodegradation efficiency (62.07 ± 1.12%) in unsupplemented minimal medium remains modest compared to specialized multi-strain consortia, it provides substantial acute detoxification, demonstrated by a 1.66-fold reduction in 96-h acute lethality (LC<sub>50</sub> increasing from 5.458 to 9.061 mg a.i./kg) in the sentinel earthworm <i>Eisenia fetida</i>. Collectively, this study provides evidence supporting a potential strategy for improving soil health and safeguarding terrestrial ecosystems from pesticide-associated toxicity by bridging microbial kinetics, statistical optimisation, and quantitative ecotoxicology.</p></div>","PeriodicalId":486,"journal":{"name":"Biodegradation","volume":"37 5","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-09-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148904890","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Low-pH sulfate reduction in acid mine drainage treatment systems: implications for acidophilic and acid-tolerant sulfate-reducing bacteria – a systematic review 酸性矿井排水处理系统中的低ph硫酸盐还原:对嗜酸和耐酸硫酸盐还原菌的影响-系统综述。
IF 4.2 4区 生物学
Biodegradation Pub Date : 2026-08-31 DOI: 10.1007/s10532-026-10358-y
Aimae Jean B. Lunsayan, Carlito Baltazar Tabelin, Ana Laura Santos, Theerayut Phengsaart, Takahiko Arima, Tetsuo Yasutaka, Hiroshi Habe, Iván Ňancucheo, Carmen Falagán, Mark Anthony I. Jose, Mylah Villacorte-Tabelin
{"title":"Low-pH sulfate reduction in acid mine drainage treatment systems: implications for acidophilic and acid-tolerant sulfate-reducing bacteria – a systematic review","authors":"Aimae Jean B. Lunsayan,&nbsp;Carlito Baltazar Tabelin,&nbsp;Ana Laura Santos,&nbsp;Theerayut Phengsaart,&nbsp;Takahiko Arima,&nbsp;Tetsuo Yasutaka,&nbsp;Hiroshi Habe,&nbsp;Iván Ňancucheo,&nbsp;Carmen Falagán,&nbsp;Mark Anthony I. Jose,&nbsp;Mylah Villacorte-Tabelin","doi":"10.1007/s10532-026-10358-y","DOIUrl":"10.1007/s10532-026-10358-y","url":null,"abstract":"<div><p>Acid mine drainage (AMD) is characterized by persistent acidity, high sulfate and dissolved metal concentrations. Sulfate-reducing bacteria (SRB) are attractive candidates for AMD remediation because dissimilatory sulfate reduction generates alkalinity while producing sulfide that can facilitate metal removal through precipitation. Extending these processes to acidic conditions has increased interest in acidophilic and acid-tolerant SRB (aSRB and atSRB), yet evidence from cultivation, molecular surveys and treatment systems has often been interpreted separately. This systematic review synthesized 53 culture-dependent, culture-independent, and treatment system studies from 2014 to 2024 to examine relationships among taxonomic occurrence, physiological capability, demonstrated low-pH sulfate reduction and treatment performance. Phylogenetic analysis showed that low-pH sulfate-reducing phenotypes were distributed across multiple lineages and 16S rRNA relatedness alone did not predict acid tolerance. <i>Desulfosporosinus</i> was the most consistently represented genus across studies, although its recurrence was influenced by cultivation strategies. Sulfate reduction was demonstrated below pH 3, with sustained low-pH activity most strongly supported by controlled reactor studies; approximately pH 4.0–5.5 emerged as a comparatively well-supported range, while activity at lower pH was more dependent on microbial physiology and experimental conditions. Low-pH sulfate reduction also emerged as a community-level process shaped by electron-donor use, metabolite turnover and complementary microbial functions, while treatment performance additionally depended on biomass retention, hydraulic conditions and sulfide management. The reviewed studies support a distinction between taxonomic presence, demonstrated activity and treatment contribution. Future work should prioritize standardized reporting of active sulfate-reduction conditions, stronger taxon-function validation and long-term field testing of low-pH sulfidogenic systems.</p></div>","PeriodicalId":486,"journal":{"name":"Biodegradation","volume":"37 5","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-08-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148863309","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Functional metabolite signatures reveal biochemical recovery trajectories in oil-polluted soils undergoing bioremediation 功能代谢物特征揭示了生物修复过程中石油污染土壤的生化恢复轨迹。
IF 4.2 4区 生物学
Biodegradation Pub Date : 2026-08-31 DOI: 10.1007/s10532-026-10355-1
Laura N. Nwogu-Chigozie, Chioma B. Chikere, Victor Ezebuiro, Fidele Tugizimana, Musiwalo S. Mulaudzi
{"title":"Functional metabolite signatures reveal biochemical recovery trajectories in oil-polluted soils undergoing bioremediation","authors":"Laura N. Nwogu-Chigozie,&nbsp;Chioma B. Chikere,&nbsp;Victor Ezebuiro,&nbsp;Fidele Tugizimana,&nbsp;Musiwalo S. Mulaudzi","doi":"10.1007/s10532-026-10355-1","DOIUrl":"10.1007/s10532-026-10355-1","url":null,"abstract":"<div><p>Reliable candidate indicators of recovery following petroleum contamination remain limited, as remediation success is commonly assessed using hydrocarbon removal alone rather than restoration of soil characteristics. This study integrated physicochemical profiling with untargeted liquid chromatography-mass spectrometry (LC–MS) metabolomics to resolve biochemical recovery trajectories across polluted soil (PS), soil undergoing bioremediation (UB), bioremediated soil (BS), and uncontaminated reference soil (CNTR) in Ogoniland, Nigeria. Total petroleum hydrocarbon (TPH) concentrations decreased progressively from 78.26 ± 6.04 mg/kg in PS to 41.23 ± 1.40 mg/kg in UB and 23.38 ± 1.81 mg/kg in BS, corresponding to an overall 70.1% reduction in BS relative to the PS. Sulphur decreased from 6.36 ± 0.70 wt% to 0.152 ± 0.052 wt%, whereas phosphorus increased from 0.068 ± 0.006 wt% to 0.325 ± 0.025 wt% after remediation. Principal component analysis of physicochemical variables explained 99.3% of total variance and resolved a directional restoration gradient (PS → UB → BS → CNTR). Untargeted metabolomics similarly separated treatment states, with PCA explaining 73.7% of total biochemical variance. Polluted and transitional soils were enriched in aromatic stress metabolites, including fluorene, triphenylphosphine oxide, quinolinic acid, and 2,4-dinitrophenol, whereas remediated soils accumulated recovery-associated metabolites such as citric acid, aconitic acid, ectoine, pyridoxamine, lipoic acid, and geranic acid. Integrated analyses showed strong positive correlations between TPH and fluorene (r = 0.88) and Triphenylphosphine oxide (TPPO) (r = 0.84), but negative correlations with citric acid (r = −0.82) and pyridoxamine (r = −0.78). These results demonstrate that hydrocarbon attenuation is tightly coupled to coordinated metabolic reprogramming and nutrient restoration. Functional metabolite signatures may provide a framework for the assessment of biochemical changes associated with soil recovery following petroleum contamination. Thus, our study demonstrates coordinated physicochemical and metabolomic shifts associated with soil recovery during bioremediation.</p></div>","PeriodicalId":486,"journal":{"name":"Biodegradation","volume":"37 5","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-08-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148863332","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Influence of chloride, sulphate, phosphate, and silicate-based potassium fertilizers and rice husk biochar on cadmium fate, complexation, leaching and uptake in maize under alkaline soil conditions 碱土条件下氯化物、硫酸盐、磷酸盐和硅酸盐钾肥和稻壳生物炭对玉米镉宿命、络合、淋溶和吸收的影响
IF 4.2 4区 生物学
Biodegradation Pub Date : 2026-08-31 DOI: 10.1007/s10532-026-10364-0
Muhammad Ashar Ayub, Muhammad Zia ur Rehman, Mujahid Ali, Muhammad Younas, Hesham F. Alharby, Ali Majrashi, Amnah M. Alamri, Amal A. M. Al-ghamdi
{"title":"Influence of chloride, sulphate, phosphate, and silicate-based potassium fertilizers and rice husk biochar on cadmium fate, complexation, leaching and uptake in maize under alkaline soil conditions","authors":"Muhammad Ashar Ayub,&nbsp;Muhammad Zia ur Rehman,&nbsp;Mujahid Ali,&nbsp;Muhammad Younas,&nbsp;Hesham F. Alharby,&nbsp;Ali Majrashi,&nbsp;Amnah M. Alamri,&nbsp;Amal A. M. Al-ghamdi","doi":"10.1007/s10532-026-10364-0","DOIUrl":"10.1007/s10532-026-10364-0","url":null,"abstract":"<div><p>Cadmium (Cd) behavior in alkaline soils is primarily controlled by the interplay of solution complexation, anion- mediated transformation, and solid-phase interactions. The experiment included a series of integrated analyses to monitor Cd speciation, mobility, transformation, leaching, and fate in maize plants. Soil solution chemistry, bioavailability, and leachate-mediated Cd release kinetics were monitored alongside maize growth, yield, and Cd accumulation patterns, as well as associated health risks. In the present work, we examined Cd fate under five potassium-sourced (@200 mg kg<sup>−1</sup> K) fertilizers (K-0-Control, KCl, K<sub>2</sub>SO<sub>4</sub>, K<sub>2</sub>HPO<sub>4</sub>, K<sub>2</sub>SiO<sub>3</sub>) with and without 1% rice husk biochar (RHB) for the maize crop. The chloride (Cl<sup>−</sup>) promoted formation of highly soluble Cd complexes promoting Cd displacement and leaching, in comparison sulphate (SO<sub>4</sub><sup>2−</sup>) resulted in less mobile fraction of Cd compared to control with no K. Potassium related phosphate (HPO<sub>4</sub><sup>2−</sup>) and silicate (SiO<sub>3</sub><sup>2−</sup>) anions resulted in substantial decrease in bioavailable fractions as well as leaching of Cd from soil, along with decreased maize root, shoot and grain accumulations, coupled with higher maize yield, improved physiology, biochemical performances and crop health. The improved maize crop parameters with potassium-sourced nutrition suggest a role for potassium nutrition in the net reversal of Cd toxicity, mutually driven by HPO<sub>4</sub><sup>2−</sup> and SiO<sub>3</sub><sup>−</sup> anions. The inclusion of RHB resulted in a substantial reduction in Cl<sup>-</sup> mediated Cd mobility, along with further enhancing HPO<sub>4</sub><sup>2−</sup> and SiO<sub>3</sub><sup>2−</sup> mediated Cd immobilization in soil, along with better plant growth and yield, proving it a better supplementary soil amendment.</p><h3>Graphical Abstract</h3>\u0000<div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":486,"journal":{"name":"Biodegradation","volume":"37 5","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-08-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148863271","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Biodegradation of hair waste for keratinase production using Bacillus altitudinis VK-1120 and its application in enzymatic dehairing 利用高原芽孢杆菌VK-1120降解头发废弃物生产角化酶及其在酶解脱毛中的应用
IF 4.2 4区 生物学
Biodegradation Pub Date : 2026-08-29 DOI: 10.1007/s10532-026-10363-1
Vijan Lal Vikash, Pradeep Srinivasan, Parthasarathy Baskaran Sujiritha, Anandasadagopan Suresh Kumar, Ponesakki Ganesan, Balaraman Madhan, Numbi Ramudu Kamini
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