Applied Biological Chemistry最新文献

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Correlation analysis between artemisinin and its derivative contents and trichome characteristics from different Artemisia species 不同青蒿品种的青蒿素及其衍生物含量与毛状体特征之间的相关性分析
IF 3.2 3区 农林科学
Applied Biological Chemistry Pub Date : 2024-03-21 DOI: 10.1186/s13765-024-00883-w
Yun Ji Park, To Quyen Truong, Yeong Bin Choi, Phuong Kim Huynh, Jinyoung Moon, Song Yi Koo, Hyoung Seok Kim, Sang Min Kim
{"title":"Correlation analysis between artemisinin and its derivative contents and trichome characteristics from different Artemisia species","authors":"Yun Ji Park,&nbsp;To Quyen Truong,&nbsp;Yeong Bin Choi,&nbsp;Phuong Kim Huynh,&nbsp;Jinyoung Moon,&nbsp;Song Yi Koo,&nbsp;Hyoung Seok Kim,&nbsp;Sang Min Kim","doi":"10.1186/s13765-024-00883-w","DOIUrl":"10.1186/s13765-024-00883-w","url":null,"abstract":"<div><p><i>Artemisia</i> species have significant commercial, medical, and economic value and are widely used in the traditional medicine and pharmaceutical industries. Artemisinin, a powerful antimalarial agent, is an important pharmaceutical metabolite that primarily accumulates within the glandular trichomes (GTs) on the leaf surface of <i>Artemisia</i> plants. Trichomes arising from the elongation of epidermal cells can be classified into GTs and non-glandular trichomes (NGTs) based on their morphology. GTs and NGTs are present in <i>Artemisia</i> species, and the relationship between GTs and artemisinin has been extensively studied; however, the correlation between NGTs and artemisinin remains relatively unexplored. In this study, we inferred artemisinin derivatives and trichome characteristics based on the type of species, developmental stage, and leaf age and conducted correlation analyses to investigate the factors influencing artemisinin content across different <i>Artemisia</i> species. Artemisinin and its derivatives exhibited variations in distribution based on species and leaf age, with a decreasing trend observed across most species as the developmental stage progressed. Noticeable differences among <i>Artemisia</i> species were observed in leaf shape, morphology, and trichome distribution. Although the observed data did not evidently differentiate between species, developmental stage, and leaf age groups, principal component analysis revealed that artemisinin was positively associated with the NGTs density, indicating a correlation coefficient of 0.56 (<i>p</i> &lt; 0.0001). Therefore, the number of NGTs may affect the artemisinin content in different <i>Artemisia</i> species.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00883-w","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140188473","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Beneficial effects of cannabidiol from Cannabis 大麻中的大麻二酚的益处
IF 3.2 3区 农林科学
Applied Biological Chemistry Pub Date : 2024-03-19 DOI: 10.1186/s13765-024-00867-w
Sullim Lee, Yunjeong Lee, Yunseo Kim, Hyunji Kim, Haerim Rhyu, Kyoungmi Yoon, Chang-Dae Lee, Sanghyun Lee
{"title":"Beneficial effects of cannabidiol from Cannabis","authors":"Sullim Lee,&nbsp;Yunjeong Lee,&nbsp;Yunseo Kim,&nbsp;Hyunji Kim,&nbsp;Haerim Rhyu,&nbsp;Kyoungmi Yoon,&nbsp;Chang-Dae Lee,&nbsp;Sanghyun Lee","doi":"10.1186/s13765-024-00867-w","DOIUrl":"10.1186/s13765-024-00867-w","url":null,"abstract":"<div><p>Cannabis, traditionally used for recreation due to psychoactive compounds in its leaves, flowers, and seeds, has not been thoroughly explored for potential therapeutic benefits. Δ9-<i>trans</i>-Tetrahydrocannabinol, a key cannabinoid in cannabis, causes hallucinogenic effects and delirium symptoms. In contrast, cannabidiol (CBD) does not induce hallucinations and has shown effectiveness in treating symptoms of various rare, incurable diseases. Cannabis exhibits neuroprotective, anti-inflammatory, anti-thrombotic, anti-bacterial, analgesic, and antiepileptic properties, recently attracting more attention. This review aims to summarize comprehensively the impact of cannabis on human health, focusing on endocannabinoids and their receptors. It also delves into recent CBD research advancements, highlighting the compound’s potential medical applications. Overall, this paper provides valuable insights into the prospective development of medical cannabis, with a particular emphasis on CBD.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00867-w","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140164222","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Acetyl genistin modulates myotube differentiation and attenuates dexamethasone-induced muscle atrophy through the FoxO1/3 signaling pathway in C2C12 myotubes 乙酰基染料木苷通过 FoxO1/3 信号通路调节 C2C12 肌细胞中肌管的分化并减轻地塞米松诱导的肌肉萎缩
IF 3.2 3区 农林科学
Applied Biological Chemistry Pub Date : 2024-03-19 DOI: 10.1186/s13765-024-00885-8
Won Min Jeong, Seung-Jin Kwag, Jun Young Ha, Seung-Jun Lee, Yeong-In Choe, Dong Yeol Lee, Dong Kyu Jeong, Hwan Hee Bae, Jin-Hee Seo, Young-Sool Hah, Sang Gon Kim
{"title":"Acetyl genistin modulates myotube differentiation and attenuates dexamethasone-induced muscle atrophy through the FoxO1/3 signaling pathway in C2C12 myotubes","authors":"Won Min Jeong,&nbsp;Seung-Jin Kwag,&nbsp;Jun Young Ha,&nbsp;Seung-Jun Lee,&nbsp;Yeong-In Choe,&nbsp;Dong Yeol Lee,&nbsp;Dong Kyu Jeong,&nbsp;Hwan Hee Bae,&nbsp;Jin-Hee Seo,&nbsp;Young-Sool Hah,&nbsp;Sang Gon Kim","doi":"10.1186/s13765-024-00885-8","DOIUrl":"10.1186/s13765-024-00885-8","url":null,"abstract":"<div><p>Muscle atrophy, a debilitating condition characterized by loss of muscle mass and strength, is a major concern in various clinical settings. Acetyl genistin (AG), a bioactive compound, was evaluated for its role in muscle cell differentiation and its potential protective effects against dexamethasone (dexa)-induced muscle atrophy. Our study demonstrated that AG significantly promoted C2C12 myotube differentiation, as evidenced by enhanced myotube width and increased fusion index. Notably, AG treatment upregulated the expression of myogenic markers, including MHC, MyoD, and MyoG. Moreover, AG displayed protective properties by attenuating dexa-induced muscle atrophy, mainly by suppressing the expression of the atrophy-related genes MAFbx and MuRF1. AG's protective effects are mechanistically attributed to its regulation of the AMPK/FoxO-dependent signaling pathway. Our results highlighted the dual benefits of AG in fostering muscle differentiation and safeguarding against muscle atrophy, positioning it as a promising agent for muscle health and therapeutic applications.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00885-8","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140161317","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Classification of soybeans from different habitats based on metabolomic–transcriptomic integration 基于代谢组-转录组整合的不同生境大豆分类
IF 3.2 3区 农林科学
Applied Biological Chemistry Pub Date : 2024-03-16 DOI: 10.1186/s13765-024-00882-x
Jinghui Wang, Qiyou Zheng, Chenxu Wang, Ao Zhou
{"title":"Classification of soybeans from different habitats based on metabolomic–transcriptomic integration","authors":"Jinghui Wang,&nbsp;Qiyou Zheng,&nbsp;Chenxu Wang,&nbsp;Ao Zhou","doi":"10.1186/s13765-024-00882-x","DOIUrl":"10.1186/s13765-024-00882-x","url":null,"abstract":"<div><p>Soybeans are a significant agricultural product in China, with certain geographical locations often yielding higher quality, and thus more expensive, soybean crops. In this study, metabolomics and transcriptomics analyses were conducted on soybean samples from nine regions in Heilongjiang and Liaoning Provinces using untargeted liquid chromatography–mass spectrometry (LC–MS) and Illumina sequencing technologies. The primary objective was to devise an effective and unbiased method for determining the geographical origin of each soybean variety to mitigate potential fraudulent practices. Through multidimensional and unidimensional analyses, successful identification of differentially expressed metabolites (DEMs) and differentially expressed genes (DEGs) was achieved, yielding statistically significant outcomes. Integration of the metabolomics and transcriptomics datasets facilitated the construction of a correlation network model capable of distinguishing soybeans originating from different geographical locations, leading to the identification of significant biomarkers exemplifying noteworthy distinctions. To validate the feasibility of this method in practical applications, partial least squares discriminant analysis was employed to differentiate soybean samples from the nine regions. The results convincingly showcased the applicability and reliability of this approach in accurately pinpointing the geographical origin of soybeans. Distinguishing itself from prior research in soybean traceability, this study incorporates an integrated analysis of metabolomics and transcriptomics data, thereby unveiling biomarkers that offer a more precise differentiation of soybean traits across distinct regions, thereby bridging a critical research gap within the soybean traceability domain. This innovative dual-data integration analysis methodology is poised to enhance the accuracy of soybean traceability tools and lay a new foundation for future agricultural product identification research.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00882-x","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140141342","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bioactive compounds from Withania somnifera dun and their toxicity against some piercing sucking pests 睡茄中的生物活性化合物及其对某些刺吸式害虫的毒性
IF 3.2 3区 农林科学
Applied Biological Chemistry Pub Date : 2024-03-13 DOI: 10.1186/s13765-024-00880-z
Amany Ragab, Mohamed A. Taher, Helmy H. El-Rafey, Ahmed Ramadan El-Rokh
{"title":"Bioactive compounds from Withania somnifera dun and their toxicity against some piercing sucking pests","authors":"Amany Ragab,&nbsp;Mohamed A. Taher,&nbsp;Helmy H. El-Rafey,&nbsp;Ahmed Ramadan El-Rokh","doi":"10.1186/s13765-024-00880-z","DOIUrl":"10.1186/s13765-024-00880-z","url":null,"abstract":"<div><p>Piercing sucking pests are destructive to many strategic crops all over the world. Botanical pesticides can be used to control these pests. A new withanolide derivative <b>3</b> named sominone A ((20<i>R</i>,22<i>R</i>)-1<i>α</i>,3<i>β</i>,20,27-tetrahydroxywitha-5,24-dienolide) was isolated from the alkaloid fraction of the whole plant of <i>Withania somnifera</i>. In addition, there are three known compounds named withasomine <b>1</b>, methyl isoferulate <b>2</b>, and coagulin Q <b>4</b> were also isolated. The structures of isolated compounds were identified using different spectroscopic methods such as 1D, 2D NMR, and HRESIMS spectroscopy. The alkaloid fraction and the four isolated compounds were tested for their pesticidal activity against four piercing sucking pests (<i>Aphis craccivora</i> Koch, <i>Bemisia tabaci</i> Gennadius, <i>Nezara viridula</i> Linnaeus, and <i>Tetranychus urticae</i> Koch) that attack many strategic crops under laboratory conditions, along with azadirachtin (Okios 3.2% EC) as a positive control. The results showed that the alkaloid compound (withasomine <b>1</b>) was the most toxic to <i>A. craccivora</i>, <i>B. tabaci</i>, <i>N. viridula,</i> and <i>T. urticae,</i> with LC<sub>50</sub> values of 15.44, 36.61, 85.11, and 128.28 ppm, respectively, compared with the control. Withanolide compounds had moderate effects on all tested pests. Biochemical parameters of six enzymes; <i>α</i>-esterase,<i> β</i>-esterase, chitinase, acetylcholinesterase, glutathione-<i>S</i>-transferase, and peroxidase of <i>A. craccivora</i> were estimated at the LC<sub>50</sub> value of the most potent compound, withasomine <b>1</b> and the values were 38.83, 72.86, 31.45, 506.4, 2.62, and 251.0, respectively. The results demonstrated that all enzymes activity levels were increased compared with the control except a remarkable inhibition in AChE enzyme level was observed compared with control. Therefore, the alkaloid fraction of <i>W. somnifera</i> is a promising extract that contains many active compounds that can be used as a natural pesticide against many harmful pests in agriculture crops.</p><h3>Graphical Abstract</h3>\u0000<div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00880-z","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140123606","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exploring the binding interactions of NOP receptor with designed natural phytochemical-neuropeptide conjugates: an in silico and SPR study 探索 NOP 受体与设计的天然植物化学物-神经肽共轭物的结合相互作用:一项硅学和 SPR 研究
IF 3.2 3区 农林科学
Applied Biological Chemistry Pub Date : 2024-03-09 DOI: 10.1186/s13765-024-00876-9
Molly E. Murray, Beatriz G. Goncalves, Mary A. Biggs, Sophia A. Frantzeskos, Charlotta G. Lebedenko, Ipsita A. Banerjee
{"title":"Exploring the binding interactions of NOP receptor with designed natural phytochemical-neuropeptide conjugates: an in silico and SPR study","authors":"Molly E. Murray,&nbsp;Beatriz G. Goncalves,&nbsp;Mary A. Biggs,&nbsp;Sophia A. Frantzeskos,&nbsp;Charlotta G. Lebedenko,&nbsp;Ipsita A. Banerjee","doi":"10.1186/s13765-024-00876-9","DOIUrl":"10.1186/s13765-024-00876-9","url":null,"abstract":"<div><p>The Nociceptin/orphanin FQ peptide (NOP) receptor is considered a member of the opioid receptor subfamily of G-protein coupled receptors (GPCRs) which has been shown to be present in many parts of the central nervous system (CNS). It plays biologically diverse roles in pain modulation, immune response and in neurodegenerative diseases. In this work, phytochemical conjugates of two known neuropeptides, melanocyte inhibition factor (MiF-1) and mammalian amidated neuropeptide NPFF with pain modulating ability were developed. The binding interactions of those conjugates with NOP receptor was examined as an approach to develop novel natural compounds that can modulate NOP receptor activity. The selected phytochemicals are well-known for their antioxidant abilities and are derived either from natural alkaloids (betanin), polyphenols (gallic acid and sinapic acid) or terpenes (pomolic acid). Each of the phytochemicals selected are antioxidants which may play a role in mitigating diseases. Three conjugates of betanin were designed with each peptide by conjugating each of the three carboxylic acid groups of betanin with the peptides, while all others were mono-conjugates. Our results indicated that the betanin conjugates with both peptides showed strong binding interactions while the pomolate-peptide conjugates showed moderate binding. In general, NPFF and its conjugates showed stronger binding with the receptor. Docking and molecular dynamics studies revealed that binding interactions occurred at the binding pocket encompassing the transmembrane helices TM1, TM3 and TM7 in most cases, with the ligands binding deep within the hydrophobic core. The binding interactions were further confirmed experimentally through SPR analysis, which also showed higher binding with the betanin conjugates. MMGBSA studies indicated that the binding energies of MiF-1 conjugates were higher compared to neat MiF-1. However, in the case of NPFF, while the betanin conjugates showed enhancement, in some cases the binding energies were found to be slightly reduced compared to neat NPFF. Overall our studies reveal that such natural phytochemical derivatives that can bind to the NOP receptor when conjugated to the mammalian amidated neuropeptide NPFF and the short sequence of melanocyte inhibiting factor MiF-1 may be potentially developed for further laboratory studies for potential pharmaceutical applications.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00876-9","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140077077","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ginsenosides as dietary supplements with immunomodulatory effects: a review 具有免疫调节作用的人参皂苷膳食补充剂综述
IF 3.2 3区 农林科学
Applied Biological Chemistry Pub Date : 2024-03-06 DOI: 10.1186/s13765-024-00881-y
Ping Tang, Sitong Liu, Junshun Zhang, Zhiyi Ai, Yue Hu, Linlin Cui, Hongyang Zou, Xia Li, Yu Wang, Bo Nan, Yuhua Wang
{"title":"Ginsenosides as dietary supplements with immunomodulatory effects: a review","authors":"Ping Tang,&nbsp;Sitong Liu,&nbsp;Junshun Zhang,&nbsp;Zhiyi Ai,&nbsp;Yue Hu,&nbsp;Linlin Cui,&nbsp;Hongyang Zou,&nbsp;Xia Li,&nbsp;Yu Wang,&nbsp;Bo Nan,&nbsp;Yuhua Wang","doi":"10.1186/s13765-024-00881-y","DOIUrl":"10.1186/s13765-024-00881-y","url":null,"abstract":"<div><p>Immune disorders have become one of the public health problems and imposes a serious economic and social burden worldwide. Ginsenosides, the main active constituents of ginseng, are regarded as a novel supplementary strategy for preventing and improving immune disorders and related diseases. This review summarized the recent research progress of ginsenosides in immunomodulation and proposed future directions to promote the development and application of ginsenosides. After critically reviewing the immunomodulatory potential of ginsenosides both in vitro and in vivo and even in clinical data of humans, we provided a perspective that ginsenosides regulated the immune system through activation of immune cells, cytokines, and signaling pathways such as MAPK, PI3K/Akt, STAT, and AMPK, as well as positively affected immune organs, gut flora structure, and systemic inflammatory responses. However, the evidence for the safety and efficacy of ginsenosides is insufficient, and the immune pathways of ginsenosides remain incompletely characterized. We believe that this review will provide a valuable reference for further research on ginsenosides as dietary supplements with immunomodulatory effects.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00881-y","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140045273","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Optimized protocols for protoplast isolation, transfection, and regeneration in the Solanum genus for the CRISPR/Cas-mediated transgene-free genome editing 用于 CRISPR/Cas 介导的无转基因基因组编辑的茄属原生质体分离、转染和再生优化方案
IF 3.2 3区 农林科学
Applied Biological Chemistry Pub Date : 2024-03-05 DOI: 10.1186/s13765-024-00870-1
So Hee Yang, Suk Weon Kim, Sujin Lee, Yeonjong Koo
{"title":"Optimized protocols for protoplast isolation, transfection, and regeneration in the Solanum genus for the CRISPR/Cas-mediated transgene-free genome editing","authors":"So Hee Yang,&nbsp;Suk Weon Kim,&nbsp;Sujin Lee,&nbsp;Yeonjong Koo","doi":"10.1186/s13765-024-00870-1","DOIUrl":"10.1186/s13765-024-00870-1","url":null,"abstract":"<div><p>The Solanaceae family includes the largest flowering crops such as tomatoes, potatoes, and eggplants. Consumer demand has led to massive development of plants in the Solanum genus, and many different Solanum varieties are now available on the market. The recent advances in Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)/CRISPR-associated protein 9 (Cas9)-based genome editing have allowed laboratories and smaller crop production companies to utilize the technology in various crops. The traditional transformation method in crops involves the use of Agrobacterium, which is considered the most efficient method for introducing exogenous genetic materials in target plants. The Agrobacterium-mediated transformation method has been also established in the Solanaceae family, enabling CRISPR/Cas-based genome editing in crops like tomatoes, potatoes, and eggplants. However, the Agrobacterium-mediated approach inevitably accompanies the insertion of exogenous DNA into the plant genome and often causes the formation of chimera that require further propagation steps. Alternatively, the CRISPR/Cas components can be introduced into protoplasts in the form of DNA for transient expression or a mixture of protein and RNA to avoid genomic insertion of foreign materials. The protoplast transformation approach involves processes including protoplast preparation, transfection, and regeneration, which require a comprehensive understanding and greater technical mastery of the tissue culture phase. Here we highlight the current research advances in protoplast transformation and discuss how to optimize the procedures of protoplast isolation, transfection, and regeneration for efficient and reproducible CRISPR/Cas-based genome editing in the genus Solanum.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00870-1","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140031794","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pannorin isolated from marine Penicillium sp. SG-W3: a selective monoamine oxidase A inhibitor 从海洋青霉 SG-W3 中分离出的 Pannorin:一种选择性单胺氧化酶 A 抑制剂
IF 3.2 3区 农林科学
Applied Biological Chemistry Pub Date : 2024-03-01 DOI: 10.1186/s13765-024-00878-7
Jong Min Oh, Qian Gao, Woong-Hee Shin, Eun-Young Lee, Dawoon Chung, Grace Choi, Sang-Jip Nam, Hoon Kim
{"title":"Pannorin isolated from marine Penicillium sp. SG-W3: a selective monoamine oxidase A inhibitor","authors":"Jong Min Oh,&nbsp;Qian Gao,&nbsp;Woong-Hee Shin,&nbsp;Eun-Young Lee,&nbsp;Dawoon Chung,&nbsp;Grace Choi,&nbsp;Sang-Jip Nam,&nbsp;Hoon Kim","doi":"10.1186/s13765-024-00878-7","DOIUrl":"10.1186/s13765-024-00878-7","url":null,"abstract":"<div><p>Six compounds were isolated from <i>Penicillium</i> sp. SG-W3, a marine-derived fungus, and their inhibitory activities against target enzymes relating to neurological diseases were evaluated. Compound <b>1</b> (pannorin) was a potent and selective monoamine oxidase (MAO)-A inhibitor with a 50% inhibitory concentration (IC<sub>50</sub>) of 1.734 μM and a selectivity index (SI) of &gt; 23.07 versus MAO-B, and it showed an efficient antioxidant activity. All compounds showed weak inhibitory activities against acetylcholinesterase, butyrylcholinesterase, and β-secretase. The inhibition constant (K<sub>i</sub>) of <b>1</b> for MAO-A was 1.049 ± 0.030 μM with competitive inhibition. Molecular docking simulation predicted that compound <b>1</b> forms hydrogen bonds with MAO-A, and binds more tightly to MAO-A than to MAO-B (− 25.02 and − 24.06 kcal/mol, respectively). These results suggest that compound <b>1</b> is a selective, reversible, and competitive MAO-A inhibitor that can be a therapeutic candidate for treating neurological diseases.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00878-7","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140003504","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Potentials of 3D printing in nutritional and textural customization of personalized food for elderly with dysphagia 三维打印在为吞咽困难老人定制个性化食品的营养和质地方面的潜力
IF 3.2 3区 农林科学
Applied Biological Chemistry Pub Date : 2024-02-29 DOI: 10.1186/s13765-023-00854-7
Chhychhy Chao, Hyong Kyong Nam, Hyun Jin Park, Hyun Woo Kim
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