Mehdi Khalaf Mohammad MAHJOOB , Mahshid AKBARIZADEH , Paria HASHEMAN , Natthaporn RATTANAPAN , Ali MORADI-GHOLAMI , Hawraz Ibrahim M. AMIN , Abduladheem Turki JALIL , Marwan Mahmood SALEH
{"title":"Recent advances in metal-organic frameworks synthesis and characterization with a focus on electrochemical determination of biological and food compounds, and investigation of their antibacterial performance","authors":"Mehdi Khalaf Mohammad MAHJOOB , Mahshid AKBARIZADEH , Paria HASHEMAN , Natthaporn RATTANAPAN , Ali MORADI-GHOLAMI , Hawraz Ibrahim M. AMIN , Abduladheem Turki JALIL , Marwan Mahmood SALEH","doi":"10.1016/j.cjac.2023.100286","DOIUrl":"https://doi.org/10.1016/j.cjac.2023.100286","url":null,"abstract":"<div><p>Metal-organic frameworks (MOFs) are hybrid materials composed of both organic and inorganic elements. MOF materials, because of their unique structures and properties, such as controllable pore size, large surface area, excellent catalytic activity, and high density of active sites, are applied in electrochemical sensors systems for the sensitive, quick, and low-cost detection of multiple analytes. MOFs, with their high specific surface area, controllable shape, and adjustable pore volume, will provide strong interaction with compounds via abundant functional groups, leading to increased selectivity for electrochemical determination of a wide range of compounds. In this review, the structure, synthesis methods, characterization, and the applications of MOFs in recent years as sensing material in fabricating sensors for detecting drugs, pesticides, heavy metals, food additives, and other contaminants are summarized, compared, and discussed. Also, MOFs were used in numerous antibacterial application areas due to their long-term release pore volume, capability, and stretch ability when integrated with a wide range of compounds and/or substances (including nanostructures, phytochemicals, antibiotics, and polymers). This review also provides a comprehensive overview of the antibacterial uses of MOFs and one's composite materials, with a focus on the different kinds of MOF nanocomposite and their antibacterial influence in various uses.</p></div>","PeriodicalId":277,"journal":{"name":"Chinese Journal of Analytical Chemistry","volume":"51 8","pages":"Article 100286"},"PeriodicalIF":1.2,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"2639226","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Large-scale enrichment of RNA-binding proteins and binding site identification using the psoralen cycloaddition reaction","authors":"Haofan Sun , Weibing Zhang , Ping Xu , Weijie Qin","doi":"10.1016/j.cjac.2023.100291","DOIUrl":"https://doi.org/10.1016/j.cjac.2023.100291","url":null,"abstract":"<div><p>RNA-binding proteins (RBPs) play central roles in the regulation of gene expression in eukaryotes. The elucidation of complex RNA‒protein interaction patterns and specific binding sites has been the subject of intensive research in recent years. However, large-scale RNA‒protein binding site (RBS) identification remains an urgent issue due to the lack of broad and unbiased RBP enrichment methods. In this study, a novel strategy for RBS identification was developed by using a psoralen probe (PP) for large-scale RBP enrichment. A total of 1957 high-confidence RBPs with good reproducibility were identified via mass spectrometry. A total of 1783 protein groups (91.1%) were previously annotated as RBPs. To identify RBSs, the enriched RBPs were treated with two different methods: digestion via ribonucleases (RNases) or hydrofluoric acid (HF). A total of 448 high-confidence RBSs were identified by using the former strategy, and 1301 high-confidence RBSs were identified by using the latter method. By comparing the identification results of cross-linking sites in both methods, it was observed that the binding of RNA to RBP was less likely to occur on acidic amino acids. Furthermore, the HF method can identify RBS in a more unbiased manner than the RNase method. The above mentioned results suggest the potential of both methods for large-scale RBS identification.</p></div>","PeriodicalId":277,"journal":{"name":"Chinese Journal of Analytical Chemistry","volume":"51 8","pages":"Article 100291"},"PeriodicalIF":1.2,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"3198713","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Real-time detection of the transport of water cluster across cytomembrane with piezoelectric sensor","authors":"Peihui Yang, Yeyan Zhu, Yan Hao","doi":"10.1016/j.cjac.2023.100307","DOIUrl":"https://doi.org/10.1016/j.cjac.2023.100307","url":null,"abstract":"","PeriodicalId":277,"journal":{"name":"Chinese Journal of Analytical Chemistry","volume":"1 1","pages":""},"PeriodicalIF":1.2,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"75273855","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
XU He-Yi , ZHANG Di , YAO Li , HUANG Ze-Jian , DAI Xin-Hua , FANG Xiang , XU Rui-Feng , WANG Fang-Jun , YANG Guang , JIANG You
{"title":"Analysis for disulfide bonds in polypeptide sequences based on ultraviolet photodissociation combined with linear ion trap mass spectrometry","authors":"XU He-Yi , ZHANG Di , YAO Li , HUANG Ze-Jian , DAI Xin-Hua , FANG Xiang , XU Rui-Feng , WANG Fang-Jun , YANG Guang , JIANG You","doi":"10.1016/j.cjac.2023.100285","DOIUrl":"https://doi.org/10.1016/j.cjac.2023.100285","url":null,"abstract":"<div><p>The analysis of dissociation products of disulfide bonds in peptide sequences has been increasingly applied in various fields. Ion dissociation is typically performed by tandem mass spectrometry, in which the overall molecular weight is determined during the first stage and the protein sequence and structure are obtained by dissociation during the second stage. However, conventional dissociation methods have some disadvantages, such as insufficient dissociation efficiency, and low product signals and varieties. Ultraviolet photodissociation (UVPD) is a rapid, efficient, and practical dissociation method for protein analysis, which excites the biomolecule skeleton and then directly excites the molecules, forming the excited states within microseconds. Although the development of mass spectrometer platforms coupled with UVPD has been reported to date, most of these studies have focused on the application of UVPD in mass spectrometry (MS). Discussions on the experimental setup for UVPD lasers, including the trigger process of the ultraviolet (UV) laser, the timing sequence of the entire dissociation and detection process, and their influence on dissociation, are limited. Therefore, an instrument platform was developed with a linear ion-trap mass spectrometer and an excimer laser to achieve UVPD by adjusting the laser trigger signal. The platform dissociated the disulfide bond of the amino acid sequence ARACAKA-ECG into two characteristic valence states (<em>m/z</em> = 498 and 332), and their highest intensities were obtained by optimizing the experimental conditions of the platform. The dissociation results of UVPD showed the characteristic peaks of ARACAKA (<em>m/z</em> 345) that were produced by disulfide bond cleavage, but these peaks were not detected by collision-induced dissociation (CID). Therefore, it was confirmed that the developed platform realized UVPD of the disulfide bond of the amino acid sequence of the polypeptide. Moreover, the developed platform provides a reference for the implementation of UVPD for peptide sequencing.</p></div>","PeriodicalId":277,"journal":{"name":"Chinese Journal of Analytical Chemistry","volume":"51 8","pages":"Article 100285"},"PeriodicalIF":1.2,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"1553842","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jiye FU , Tiantian TU , Tian WEN , Qiongdan ZHANG , Chao HUANG , Zuhong LU , Jing TU
{"title":"High specific microRNA detection based on G-quadruplex sensitive fluorescence under isothermal amplification","authors":"Jiye FU , Tiantian TU , Tian WEN , Qiongdan ZHANG , Chao HUANG , Zuhong LU , Jing TU","doi":"10.1016/j.cjac.2023.100292","DOIUrl":"https://doi.org/10.1016/j.cjac.2023.100292","url":null,"abstract":"<div><p>MicroRNAs (miRNAs) are crucial for various basic cellular processes and have been regarded as an important indicator for pathogenesis and development of cancer. While miRNAs are characterized by short sequence length, large single cell copy number variation, low abundance in vivo, and high homologous sequence similarity. The development of miRNA detection methods with high sensitivity, good selectivity and low cost is the key to study the function of miRNA. In this article, a method combining isothermal chain replacement amplification and G-quadruplex (G4) specific detection is developed for highly specific and sensitive detection of miRNA. By designing proper DNA sequences, a three-stranded DNA complex was formed and produced a lot of G4 structure sequences, which can be stained by specific fluorescence dye and quantified. In the experiment, the fluorescence dye shows extremely high specificity, which brings excellent signal discrimination, so that the target miRNAs can be accurately detected. Experiments under high background noise also verified this method is highly selective for target miRNAs. This method holds great imagination in expanding the detection methods to more platforms, such as nanopore sensors, because it alters the secondary structure of DNA sequences.</p></div>","PeriodicalId":277,"journal":{"name":"Chinese Journal of Analytical Chemistry","volume":"51 8","pages":"Article 100292"},"PeriodicalIF":1.2,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"1894804","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ting Cao , Hong Ma , Lei Zheng , Wenbo Lu , Zhefeng Fan
{"title":"A ratiometric fluorescent probe for hydrazine imaging in biological and environmental samples","authors":"Ting Cao , Hong Ma , Lei Zheng , Wenbo Lu , Zhefeng Fan","doi":"10.1016/j.cjac.2023.100293","DOIUrl":"https://doi.org/10.1016/j.cjac.2023.100293","url":null,"abstract":"<div><p>Hydrazine (N<sub>2</sub>H<sub>4</sub>) is widely used in many fields, but it is highly toxic to life when exposed to the environment. In view of this, one fluorescent probe 3HF-Br, which can produce ratio signals of absorption spectrum and emission spectrum for the detection of N<sub>2</sub>H<sub>4</sub>, was constructed in this work. Based on the sensing mechanism of S<sub>N</sub>2 nucleophilic substitution - cyclization - elimination, 3HF-Br has sensitive spectral response to N<sub>2</sub>H<sub>4</sub> via ESIPT effect. After the reaction, the highest emission peak of fluorescence spectrum shifted from 501 nm (cyan blue) to 561 nm (bright green), with the ratio signal (<em>I</em><sub>561/501</sub> <sub>nm</sub>) increased by about 10 time. For N<sub>2</sub>H<sub>4</sub> detection, 3HF-Br has high sensitivity and low detection limit (0.184 µM), and the maximum ratio reached at 17 min. In addition, it also showed high selectivity for the detection and is not disturbed by other nucleophilic substances. It is worth mentioning that under the ratio signal, the probe 3HF-Br can effectively monitor and image N<sub>2</sub>H<sub>4</sub> not only at the cellular level but also in zebrafish. In addition, the probe 3HF-Br can also effectively respond to N<sub>2</sub>H<sub>4</sub> in various soil and water samples in practical environments.</p></div>","PeriodicalId":277,"journal":{"name":"Chinese Journal of Analytical Chemistry","volume":"51 8","pages":"Article 100293"},"PeriodicalIF":1.2,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"1894805","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yuan-Yuan LI , Yong-Li WU , Na CHEN , Yu-Long MA , Wen-Xin JI , Yong-Gang SUN
{"title":"Preparation of metal oxide-loaded nickel foam adsorbents modified by biochar for the removal of cationic dyes from wastewater","authors":"Yuan-Yuan LI , Yong-Li WU , Na CHEN , Yu-Long MA , Wen-Xin JI , Yong-Gang SUN","doi":"10.1016/j.cjac.2023.100278","DOIUrl":"https://doi.org/10.1016/j.cjac.2023.100278","url":null,"abstract":"<div><p>In this study, metal composite oxides grown on nickel foam were prepared, which were modified by dopamine and biochar to obtain cauliflower-shaped Co<sub>2</sub>MnO<sub>4</sub>/NF@PDA/BC adsorption material to adsorb cationic dyes from aqueous solutions. The maximum adsorption amounts <em>q</em><sub>max</sub> for methylene blue (MB), malachite green (MG), and crystal violet (CV) were 8.44, 41.03 and 3.39 mg g<sup>−</sup><sup>1</sup>, and the adsorption aligned with the Langmuir isothermal model as single molecular layer adsorption on a homogeneous surface. The adsorption experiments of dyes were conducted using lake water in the environment, and the adsorption rates of MB, MG, and CV were 91.4%, 94.8% and 85.1%, respectively. Meanwhile, the material has wide pH applicability (3–9), and good adsorption-desorption cycle performance. In addition, the synthesized adsorbent Co<sub>2</sub>MnO<sub>4</sub>/NF@PDA/BC and the control adsorbent were investigated and shown to have good adsorption capacity. In conclusion, the adsorbent materials synthesized in this work have some application prospects in dye wastewater adsorption.</p></div>","PeriodicalId":277,"journal":{"name":"Chinese Journal of Analytical Chemistry","volume":"51 8","pages":"Article 100278"},"PeriodicalIF":1.2,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"1689274","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lei WANG , Rui WANG , Jinxu DONG , Yikai WANG , Xin HUANG , Changbao CHEN
{"title":"Research on the extraction, purification and determination of chemical components, biological activities, and applications in diet of black chokeberry (Aronia melanocarpa)","authors":"Lei WANG , Rui WANG , Jinxu DONG , Yikai WANG , Xin HUANG , Changbao CHEN","doi":"10.1016/j.cjac.2023.100301","DOIUrl":"https://doi.org/10.1016/j.cjac.2023.100301","url":null,"abstract":"<div><p>Black chokeberry is a deciduous perennial shrub. As a kind of berried fruit plants, its fruit is sweet and sour with a slightly astringent. It is not only rich in nutrients but also has high health functions. The fruits of black chokeberry are rich in proanthocyanidins, anthocyanins and other polyphenolic bioactive components. Considering the instability of proanthocyanidins, anthocyanins and polyphenolic components, the extraction, purification, and determination could influence the recovery and content evaluation of black chokeberry significantly. This paper reviewed and compared research on the extraction, purification, and determination of main chemical components of black chokeberry, to provide references for efficient use of resources. Recent years, black chokeberry used in food industries, mainly as it has strong antioxidant and anti-ageing properties. Besides that, hypoglycaemia, anti-inflammatory, antibacterial, hepatoprotective and anti-cancer effects of black chokeberry were also reviewed. It is expected to provide a support for the application of black chokeberry fruits in healthcare field. Meanwhile, a variety of juices, wines, preserves, teas, effervescent tablets, and nutritional supplements used black chokeberry summarized in this review. It could provide reference for further utilization and development of black chokeberry in functional food.</p></div>","PeriodicalId":277,"journal":{"name":"Chinese Journal of Analytical Chemistry","volume":"51 10","pages":"Article 100301"},"PeriodicalIF":1.2,"publicationDate":"2023-07-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"3463409","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}