International journal of systematic and evolutionary microbiology最新文献

{"title":"<i>Aurantiacibacter hainanensis</i> sp. nov. and <i>Qipengyuania zhejiangensis</i> sp. nov., two novel <i>Erythrobacteraceae</i> species isolated from tidal flat sediments.","authors":"Wen-Jia Liu, Yu Zhang, Ke Cao, Jia-Xi Li, Yu-Qiao Wen, Cong Sun, Lin Xu","doi":"10.1099/ijsem.0.006469","DOIUrl":"https://doi.org/10.1099/ijsem.0.006469","url":null,"abstract":"<p><p>Two Gram-stain-negative, rod-shaped, non-motile, aerobic and carotenoid-producing strains, belonging to the family <i>Erythrobacteraceae,</i> designated as H149^T and Z2^T, were isolated from tidal flat sediment samples collected in Hainan and Zhejiang, PR China, respectively. Growth of strain H149^T occurred at 15-42 °C, 0-10.0 % (w/v) NaCl, and pH 6.0-8.5, with the optima at 35-37 °C, 3.0-3.5 % (w/v) NaCl and pH 7.0. Strain Z2^T grew at 15-37 °C, 0-6.0 % (w/v) NaCl, and pH 6.0-9.5, with the optima at 25-30 °C, 0.5-1.0 % (w/v) NaCl and pH 6.0-6.5. Ubiquinone-10 was the sole ubiquinone in two strains. The predominant cellular fatty acids of strain H149^T were C_16 : 0, summed feature 3 and summed feature 8, while those of strain Z2^T were C_17 : 1 <i> ω</i>6<i>c</i>, summed feature 3 and summed feature 8. Strains H149^T and Z2^T shared diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine and sphingoglycolipid as major polar lipids. The 16S rRNA gene sequence identity analysis indicated that strain H149^T had the highest sequence identity of 98.4 % with <i>Aurantiacibacter odishensis</i> KCTC 23981^T, and strain Z2^T had that of 98.2 % with <i>Qipengyuania pacifica</i> NZ-96^T. Phylogenetic trees based on 16S rRNA gene and core-genome sequences revealed that strains H149^T and Z2^T formed two independent clades in the genera <i>Aurantiacibacter</i> and <i>Qipengyuania</i>, respectively. Strain H149^T had average nucleotide identity values of 74.0-81.3 % and <i>in silico</i> DNA-DNA hybridization values of 18.5-23.1 % with <i>Aurantiacibacter</i> type strains, while strain Z2^T had values of 73.3-78.7 % and 14.5-33.3 % with <i>Qipengyuania</i> type strains. The genomic DNA G+C contents of strains H149^T and Z2^T were 64.3 and 61.8 %, respectively. Based on the genetic, genomic, phylogenetic, physiological and chemotaxonomic results, strains H149^T (=KCTC 8397^T=MCCC 1K08920^T) and Z2^T (=KCTC 8396^T=MCCC 1K08946^T) are concluded to represent two novel <i>Erythrobacteraceae</i> species for which the names <i>Aurantiacibacter hainanensis</i> sp. nov. and <i>Qipengyuania zhejiangensis</i> sp. nov. are proposed, respectively.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":null,"pages":null},"PeriodicalIF":2.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141758630","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"<i>Pseudomonas beijingensis</i> sp. nov., a novel species widely colonizing plant rhizosphere.","authors":"Kaiji Liao, Jingyi Wu, Can Wang, Jun-Zhou Li, Hai-Lei Wei","doi":"10.1099/ijsem.0.006473","DOIUrl":"10.1099/ijsem.0.006473","url":null,"abstract":"<p><p>A polyphasic taxonomic approach was used to characterize the three bacterial strains (FP830^T, FP2034, and FP2262) isolated from the rhizosphere soil of rice, corn, and highland barley in Beijing, Heilongjiang, and Tibet, respectively, in PR China. These strains were Gram-negative, rod-shaped, and have one or two polar flagella. They exhibited optimal growth at 28 °C and pH 7.0 in the presence of 1 % (w/v) NaCl and showed fluorescence under ultraviolet light when cultivated on King's B plates. The FP830^T genome size is 6.4 Mbp with a G+C content of 61.0 mol%. FP830^T has the potential to promote plant growth by producing various metabolites such as fengycin, pyoverdin, indole-3-acetic acid, and the volatile substance 2,3-butanediol. Phylogenetic analysis indicated that three isolates formed an independent branch, which most closely related to type strains <i>Pseudomonas thivervalensis</i> DSM 13194^T and <i>Pseudomonas zanjanensis</i> SWRI12^T. The values of average nucleotide identity and digital DNA-DNA hybridization between three isolates and closest relatives were not higher than 93.7 and 52.3 %, respectively. The dominant cellular fatty acids were C_16 : 0, summed feature 3 (C_16 : 1 <i> ω</i>7<i>c</i>/C_16 : 1 ω6<i>c</i>), and summed feature 8 (C_18 : 1ω7<i>c</i>/C_18 : 1ω6<i>c</i>). The major polar lipids were phosphatidylethanolamine, diphosphatidylglycerol, and aminophospholipid. The predominant respiratory quinone was ubiquinone (Q-9). Based on polyphasic taxonomic analysis, it was concluded that strains FP830^T, FP2034, and FP2262 represented a novel species within the genus <i>Pseudomonas</i>, and <i>Pseudomonas beijingensis</i> sp. nov. was proposed for the name of novel species. The type strain is FP830^T (=ACCC 62448^T=JCM 35689^T).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":null,"pages":null},"PeriodicalIF":2.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11281800/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141758632","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"<i>Taklimakanibacter deserti</i> gen. nov., sp. nov. and <i>Taklimakanibacter lacteus</i> sp. nov., isolated from desert soil.","authors":"Huan-Huan He, Chu-Ying Feng, Dong Wang, Zhuo-Huan Zheng, Shuai Li, Zi-Xin Xu, Chun-Yan Lu, Wen-Hui Lian, Lei Dong, Wen-Jun Li","doi":"10.1099/ijsem.0.006462","DOIUrl":"https://doi.org/10.1099/ijsem.0.006462","url":null,"abstract":"<p><p>Two Gram-stain-negative, aerobic, milk-white coloured, non-motile, short rod-shaped bacteria, designated as strains SYSU D60010^T and SYSU D60012^T, were isolated from sand samples collected from the Taklimakan Desert of Xinjiang Province in China. Both strains were positive for oxidase, catalase and nitrate reduction, but negative for amylase, H₂S production, hydrolysis of gelatin and cellulase. Strains SYSU D60010^T and SYSU D60012^T grew well at 28 °C, at pH 7 and had the same NaCl tolerance range of 0-1 % (w/v). The major fatty acids (>5 %) of strains SYSU D60010^T and SYSU D60012^T were summed feature 8 (C_18 : 1 <i> ω</i>7<i>c</i> and/or C_18 : 1 <i> ω</i>6<i>c</i>), iso-C_19 : 0 cyclo <i>ω</i>8<i>c</i>, C_16 : 0 and iso-C_18 : 1 2-OH. Q-10 was the only respiratory ubiquinone. Strains SYSU D60010^T and SYSU D60012^T showed high 16S rRNA gene sequence similarities to <i>Aestuariivirga litoralis</i> SYSU M10001^T (94.2 and 94.1 %), <i>Rhodoligotrophos jinshengii</i> BUT-3^T (92.0 and 91.9 %) and <i>Rhodoligotrophos appendicifer</i> 120-1^T (91.8 and 91.7 %), and the genomes were 7.4 and 5.8 Mbp in size with DNA G+C contents of 62.8 and 63.0 mol%, respectively. Phylogenetic, phenotypic and chemotaxonomic characteristics indicated that these two strains represent a novel genus and two novel species within the family <i>Aestuariivirgaceae</i>. We propose the name <i>Taklimakanibacter deserti</i> gen. nov., sp. nov. for strain SYSU D60010^T, representing the type strain of this species (=KCTC 52783^T =NBRC 113344^T) and <i>Taklimakanibacter lacteus</i> gen. nov., sp. nov. for strain SYSU D60012^T, representing the type strain of this species (=KCTC 52785^T=NBRC 113128^T).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":null,"pages":null},"PeriodicalIF":2.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141734124","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Validation List no. 218. Valid publication of new names and new combinations effectively published outside the IJSEM.","authors":"Aharon Oren, Markus Göker","doi":"10.1099/ijsem.0.006398","DOIUrl":"10.1099/ijsem.0.006398","url":null,"abstract":"","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":null,"pages":null},"PeriodicalIF":2.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11290941/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141855505","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"<i>Spartinivicinus poritis</i> sp. nov., a red pigment-producing bacterium isolated from a scleractinian coral <i>Porites lutea</i>.","authors":"Sumbal Sajid, Guoqiang Zhang, Zongyao Zhang, Yishan Lu, Lianguo Chen, Lin Cai","doi":"10.1099/ijsem.0.006444","DOIUrl":"https://doi.org/10.1099/ijsem.0.006444","url":null,"abstract":"<p><p>A Gram-stain-negative, red pigment-producing, aerobic, and rod-shaped bacterial strain (A2-2^T) was isolated from a bleached scleractinian coral (<i>Porites lutea</i>). Strain A2-2^T grew with 1.0-7.0 % (w/v) NaCl (optimum, 3.0 %), at pH 6.0-11.0 (optimum, pH 8.0), and at 18-41 °C (optimum, 35 °C). Results of phylogenetic analysis based on 16S rRNA gene sequences suggested that strain A2-2^T fell within the genus <i>Spartinivicinus</i> and was closely related to <i>Spartinivicinus ruber</i> S2-4-1H^T (98.1 % sequence similarity) and <i>Spartinivicinus marinus</i> SM1973^T (98.0 % sequence similarity). The predominant cellular fatty acids of strain A2-2^T were C_16 : 0 (31.0 %), summed feature 3 (29.0 %), summed feature 8 (11.7 %), C_12 : 0 3-OH (6.4 %), and C_10 : 0 3-OH (5.5 %), while the major respiratory quinone was Q-9. The polar lipids mainly comprised phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, and an unidentified phospholipid. The genome size of strain A2-2^T was 6.8 Mb, with a G+C content of 40.2 mol%. The DNA-DNA hybridization value was 24.2 % between A2-2^T and <i>S. ruber</i> S2-4-1H^T and 36.9 % between A2-2^T and <i>S. marinus</i> SM1973^T, while the average nucleotide identity values were 80.1 and 88.8 %, respectively. Based on these findings, strain A2-2^T could be recognized to represent a novel species of the genus <i>Spartinivicinus</i>, for which the name <i>Spartinivicinus poritis</i> sp. nov. is proposed. The type strain is A2-2^T (=MCCC 1K08228^T=KCTC 8323^T).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":null,"pages":null},"PeriodicalIF":2.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141497964","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"<i>Streptococcus raffinosi</i> sp. nov., isolated from human breast milk samples.","authors":"Ha Viet Nguyen, Anh Thi Van Trinh, Linh Nguyen Hai Bui, Anh Thi Lan Hoang, Quyen Thi Le Tran, Trung Thanh Trinh","doi":"10.1099/ijsem.0.006442","DOIUrl":"https://doi.org/10.1099/ijsem.0.006442","url":null,"abstract":"<p><p>Novel Gram-positive, catalase-negative, α-haemolytic cocci were isolated from breast milk samples of healthy mothers living in Hanoi, Vietnam. The 16S rRNA gene sequences of these strains varied by 0-2 nucleotide polymorphisms. The 16S rRNA gene sequence of one strain, designated as BME SL 6.1^T, showed the highest similarity to those of <i>Streptococcus salivarius</i> NCTC 8618^T (99.4 %), <i>Streptococcus vestibularis</i> ATCC 49124^T (99.4 %), and <i>Streptococcus thermophilus</i> ATCC 19258^T (99.3 %) in the salivarius group. Whole genome sequencing was performed on three selected strains. Phylogeny based on 631 core genes clustered the three strains into the salivarius group, and the strains were clearly distinct from the other species in this group. The average nucleotide identity (ANI) value of strain BME SL 6.1^T exhibited the highest identity with <i>S. salivarius</i> NCTC 8618^T (88.4 %), followed by <i>S. vestibularis</i> ATCC 49124^T (88.3 %) and <i>S. thermophilus</i> ATCC 19258^T (87.4 %). The ANI and digital DNA-DNA hybridization values between strain BME SL 6.1^T and other species were below the cut-off value (95 and 70 %, respectively), indicating that it represents a novel species of the genus <i>Streptococcus</i>. The strains were able to produce α-galactosidase and acid from raffinose and melibiose. Therefore, we propose to assign the strains to a new species of the genus <i>Streptococcus</i> as <i>Streptococcus raffinosi</i> sp. nov. The type strain is BME SL 6.1^T (=VTCC 12812^T=NBRC 116368^T).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":null,"pages":null},"PeriodicalIF":2.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141491912","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"<i>Nocardioides bizhenqiangii</i> sp. nov. and <i>Nocardioides renjunii</i> sp. nov., isolated from soil and faeces of Tibetan antelope (<i>Pantholops hodgsonii</i>) on the Qinghai-Tibet Plateau.","authors":"Huimin Zhou, Linglin Cao, Caixin Yang, Sihui Zhang, Ji Pu, Jing Yang, Shuo Ning, Xiaorui Liu, Chunmei Liu, Liyun Liu, Jianguo Xu","doi":"10.1099/ijsem.0.006437","DOIUrl":"https://doi.org/10.1099/ijsem.0.006437","url":null,"abstract":"<p><p>Two novel strain pairs (HM61^T/HM23 and S-34^T/S-58) were isolated from soil and the faeces of Tibetan antelope (<i>Pantholops hodgsonii</i>) collected at the Qinghai-Tibet Plateau of PR China. All four new isolates were aerobic, non-motile, Gram-stain-positive, catalase-positive, oxidase-negative, and short rod-shaped bacteria. The results of phylogenetic analysis based on the full-length 16S rRNA genes and 283 core genomic genes indicated that the four strains were separated into two independent branches belonging to the genus <i>Nocardioides</i>. Strains HM61^T and HM23 were most closely related to <i>Nocardioides pelophilus</i> THG T63^T (98.58 and 98.65 % 16S rRNA gene sequence similarity). Strains S-34^T and S-58 were most closely related to <i>Nocardioides okcheonensis</i> MMS20-HV4-12^T (98.89 and 98.89 % 16S rRNA gene sequence similarity). The G+C contents of the genomic DNA of strains HM61^T and S-34^T were 70.6 and 72.5 mol%, respectively. Strains HM61^T, S-34^T and the type strains of closely related species in the analysis had average nucleotide identity values of 75.4-90.5 % as well as digital DNA-DNA hybridization values between 20.1 and 40.8 %, which clearly indicated that the four isolates represent two novel species within the genus <i>Nocardioides</i>. The chemotaxonomic characteristics of strains HM61^T and S-34^T were consistent with the genus <i>Nocardioides</i>. The major fatty acids of all four strains were <i>iso</i>-C_16 : 0, C_17 : 1 <i> ω</i>8<i>c</i> or C_18 : 1 <i> ω</i>9<i>c</i>. For strains HM61^T and S-34^T, MK-8(H₄) was the predominant respiratory quinone, ll-2,6-diaminopimelic acid was the diagnostic diamino acid in the cell-wall peptidoglycan, and the polar lipids profiles were composed of diphosphatidylglycerol and phosphatidylglycerol. Based on phylogenetic, phenotypic, and chemotaxonomic data, we propose that strains HM61^T and S-34^T represent two novel species of the genus <i>Nocardioides</i>, respectively, with the names <i>Nocardioides bizhenqiangii</i> sp. nov. and <i>Nocardioides renjunii</i> sp. nov. The type strains are HM61^T (=GDMCC 4.343^T=JCM 36399^T) and S-34^T (=CGMCC 4.7664^T=JCM 33792^T).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":null,"pages":null},"PeriodicalIF":2.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141491911","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Phylogenomic analyses of the genus <i>Actinoplanes</i>: description of four novel genera.","authors":"Ivan Roman, Victor Fedorenko, Oleksandr Gromyko","doi":"10.1099/ijsem.0.006464","DOIUrl":"https://doi.org/10.1099/ijsem.0.006464","url":null,"abstract":"<p><p>The genus <i>Actinoplanes</i> comprises 57 species (in February 2024) that are important components of ecosystems and are widely used in biotechnology, especially pharmaceuticals. Phylogenetic analysis of the family <i>Micromonosporaceae</i> (based on the 16S rRNA gene sequence) allowed us to group members of different genera into separate clades; however, the genus <i>Actinoplanes</i> was divided into three separate clades. Such phylogenetic heterogeneity could be due to the limitations of 16S rRNA gene analysis. In response to this heterogeneity, genomic phylogeny was performed. Phylogenomic reconstruction based on 324 single-copy orthologous genes allowed us to divide the genus <i>Actinoplanes</i> first into four clades and then, based on average nucleotide identity analysis, into five clades. Finally, chemotaxonomic analysis of each clade confirmed each clade's distinctiveness and the necessity to reclassify the genus <i>Actinoplanes</i>. The obtained data allowed us to divide the genus <i>Actinoplanes</i> into five genera: <i>Actinoplanes</i>, <i>Paractinoplanes</i>, <i>Winogradskya</i>, <i>Symbioplanes</i> and <i>Amorphoplanes</i>.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":null,"pages":null},"PeriodicalIF":2.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141751710","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"<i>Flavobacterium adhaerens</i> sp. nov. and <i>Flavobacterium maritimum</i> sp. nov., two novel flavobacteria isolated from the Pearl River Estuary.","authors":"Zi-Qi Peng, Jia-Ling Li, Zi-Wen Yang, Pan-Deng Wang, Dan-Yuan Guo, Xiao-Qing Luo, Qi-Qi Deng, Qi Li, Ting-Ting She, Wen-Jun Li","doi":"10.1099/ijsem.0.006471","DOIUrl":"https://doi.org/10.1099/ijsem.0.006471","url":null,"abstract":"<p><p>Two strains, designated as SYSU M80004^T and SYSU M80005^T, were isolated from water sampled in the Pearl River Estuary, Guangzhou, Guangdong, PR China. The strains were Gram-stain-negative and aerobic. Strain SYSU M80004^T could grow at pH 6.0-8.0 (optimum, pH 7.0), 22-30 °C (optimum, 28 °C) and in the presence of 0-1 % NaCl (w/v; optimum 0 %). Strain SYSU M80005^T could grow at pH 6.0-8.0 (optimum, pH 7.0), 4-37 °C (optimum, 28 °C) and in the presence of 0-1 % NaCl (w/v; optimum 0%). Both strains contained MK-6 as the predominant menaquinone. C_16 : 0 and iso-C_15 : 0 were identified as the major fatty acids (>10 %) of strain SYSU M80004^T while strain SYSU M80005^T contained iso-C_15 : 0 and iso-C_17 : 0 3-OH as major fatty acids. Phosphatidylethanolamine was present as the major polar lipid in both strains. The average nucleotide identity and digital DNA-DNA hybridization values between these two strains and their closest relatives were 73.5-79.3 % and 19.6-23.2 %, respectively. Phylogenetic analysis based on the 16S rRNA gene and genomic sequences indicated they belonged to the genus <i>Flavobacterium</i>. Therefore, on the basis of phenotypic, physiological, chemotaxonomic and genomic evidence, two novel species, <i>Flavobacterium adhaerens</i> sp. nov. (type strain=SYSU M80004^T=CDMCC 1.4522^T=KCTC 102268^T) and <i>Flavobacterium maritimum</i> sp. nov. (type strain=SYSU M80005^T=CGMCC 1.4523^T= KCTC 102269^T) are proposed.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":null,"pages":null},"PeriodicalIF":2.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141748081","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"<i>Salinibacterium soli</i> sp. nov., isolated from lakeside soil.","authors":"Yingying Wan, Miaohuan Xiong, Lingfeng Zhu, Haiyan Ni, Xuelan Chen, Bin Liu, Jian He","doi":"10.1099/ijsem.0.006479","DOIUrl":"10.1099/ijsem.0.006479","url":null,"abstract":"<p><p>A Gram-stain-positive, rod-shaped, non-spore-forming and non-motile bacterium, designated strain WY-16^T. Growth was observed at 20-42 °C (optimum, 30 °C), pH 6-9 (optimum, pH 7) and salinity of 0-3 % (w/v; optimum, 1 %). Phylogenetic analysis based on genome sequences indicated that WY-16^T was affiliated to the family <i>Microbacteriaceae</i> and most closely related to <i>Salinibacterium xinjiangense</i> and <i>Salinibacterium amurskyense</i>. The average nucleotide identity values between strain WY-16^T and <i>S. xinjiangense</i> and <i>S. amurskyense</i> were 74.7 and 72.5 %, respectively. The digital DNA-DNA hybridization values between strain WY-16^T and <i>S. xinjiangense</i> and <i>S. amurskyense</i> were 19.6 and 18.6 %, respectively. The predominant fatty acids were anteiso-C_15 : 0, iso-C_16 : 0 and iso-C_16 : 0 10-methyl. The major menaquinones were MK-12, MK-13, MK-14 and MK-15. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, one unidentified glycolipid and one unidentified phospholipid. The cell-wall peptidoglycan contained 2,4-diaminobutyric acid as the diamino acid and ribose, rhamnose, glucose and galactose were the major cell-wall sugars. Based on phenotypic, genotypic and phylogenetic evidence, strain WY-16^T represents a novel species in the genus <i>Salinibacterium</i>, for which the name <i>Salinibacterium soli</i> sp. nov. is proposed. The type strain is WY-16^T (=GDMCC 1.4011^T=JCM 36421^T).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":null,"pages":null},"PeriodicalIF":2.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141787987","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}