International journal of systematic and evolutionary microbiology最新文献

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Solicola agrisoli sp. nov., a novel actinobacterium isolated from agricultural soil in Republic of South Korea. 从韩国农业土壤中分离到的一种新型放线菌。
IF 2 3区 生物学
International journal of systematic and evolutionary microbiology Pub Date : 2025-10-01 DOI: 10.1099/ijsem.0.006921
Syed Muhammad Khizar Shah, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
{"title":"<i>Solicola agrisoli</i> sp. nov., a novel actinobacterium isolated from agricultural soil in Republic of South Korea.","authors":"Syed Muhammad Khizar Shah, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee","doi":"10.1099/ijsem.0.006921","DOIUrl":"10.1099/ijsem.0.006921","url":null,"abstract":"<p><p>A novel actinobacterial strain, designated PLA-1-18<sup>T</sup>, was isolated from agricultural soil in Suwon-si, Republic of Korea. Cells were Gram-stain-positive, coccoid-rod-shaped, motile and obligately aerobic. Growth occurred at 20-30 °C (optimum, 25 °C), pH 5.0-9.0 (optimum, pH 7.0) and in the presence of 0-2% w/v NaCl (optimum, 1% w/v). Strain PLA-1-18<sup>T</sup> was catalase- and oxidase-positive. Phylogenetic analysis based on 16S rRNA gene sequences placed PLA-1-18<sup>T</sup> within the genus <i>Solicola</i> (family <i>Nocardioidaceae</i>, order <i>Propionibacteriales</i> and class <i>Actinomycetes</i>), with the highest sequence similarity to <i>Solicola gregarius</i> A5X3R13<sup>T</sup> (97.6%) and <i>Nocardioides iriomotensis</i> IR27-S3<sup>T</sup> (95.8%). The genome comprised 4.6 Mbp with a G+C content of 72.6 mol%. The major fatty acids were 10-methyl C<sub>18:0</sub>, 10-methyl C<sub>17:0</sub> and <i>iso</i>-C<sub>16:0</sub> under the experimental conditions used in this study. The predominant polar lipids were phosphatidylglycerol, diphosphatidylglycerol and phosphatidylinositol, along with two unidentified phospholipids, three unidentified amino lipids and one unidentified polar lipid. Menaquinone MK-9(H<sub>4</sub>) was the predominant respiratory quinone detected. The genome of strain PLA-1-18<sup>T</sup> shared only 73.0% average nucleotide identity and 78 % digital DNA-DNA hybridization with its closest relative, <i>S. gregarius</i> DSM 112953<sup>T</sup>, supporting its classification as a distinct novel species. Based on polyphasic taxonomic data, strain PLA-1-18<sup>T</sup> represents a novel species of the genus <i>Solicola</i>, for which the name <i>Solicola agrisoli</i> sp. nov. is proposed. The type strain is PLA-1-18<sup>T</sup> (=KEMB 23536<sup>T</sup>=KCTC 59365<sup>T</sup>=TBRC 19594<sup>T</sup>).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 10","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145232601","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pantoea phosphatilytica sp. nov. and Pantoea phyllosphaerae sp. nov., two phosphate-solubilizing and siderophore-producing bacteria isolated from citrus phyllosphere. 从柑橘叶根圈分离的两种溶磷和产铁载体细菌Pantoea phosphatitica sp. nov.和Pantoea phyllosphaerae sp. nov.。
IF 2 3区 生物学
International journal of systematic and evolutionary microbiology Pub Date : 2025-10-01 DOI: 10.1099/ijsem.0.006942
Songzhen Yang, Jiali Li, Jun Zhang, Haoxiang Luo, Honghong Dong, Ming-Rong Deng, Honghui Zhu, Guang-Da Feng
{"title":"<i>Pantoea phosphatilytica</i> sp. nov. and <i>Pantoea phyllosphaerae</i> sp. nov., two phosphate-solubilizing and siderophore-producing bacteria isolated from citrus phyllosphere.","authors":"Songzhen Yang, Jiali Li, Jun Zhang, Haoxiang Luo, Honghong Dong, Ming-Rong Deng, Honghui Zhu, Guang-Da Feng","doi":"10.1099/ijsem.0.006942","DOIUrl":"https://doi.org/10.1099/ijsem.0.006942","url":null,"abstract":"<p><p>Two yellow-pigmented, Gram-stain-negative, aerobic, motile and rod-shaped bacterial strains, designated RHCKP32<sup>T</sup> and RRHST58<sup>T</sup>, were isolated from the citrus leaves in Renhua County, a famous planting area located in Guangdong Province, China. Phylogenomic analysis showed that they belonged to the genus <i>Pantoea</i>, and strain RHCKP32<sup>T</sup> was most closely related to <i>Pantoea deleyi</i> LMG 24200<sup>T</sup>, while strain RRHST58<sup>T</sup> showed the closest relationship to <i>Pantoea septica</i> LMG 5345<sup>T</sup>. The overall genomic relatedness analysis showed that strains RHCKP32<sup>T</sup> and RRHST58<sup>T</sup> shared 84.3‒94.6 and 89.5‒94.5% average nucleotide identity and 32.0‒58.0 and 38.5‒58.2% digital DNA-DNA hybridization with their closely related type strains, respectively, which were all below the suggested threshold values for novel species delimitation. They both took ubiquinone 8 (Q-8) as the predominant respiratory quinone and C<sub>16:0</sub>, C<sub>17:0</sub> cyclo, summed feature 2 (C<sub>14:0</sub> 3-OH and/or iso-C<sub>16:1</sub> I), summed feature 3 (C<sub>16:1</sub> <i> ω</i>7<i>c</i> and/or C<sub>16:1</sub> <i> ω</i>6<i>c</i>) and summed feature 8 (C<sub>18:1</sub> <i> ω</i>7<i>c</i> and/or C<sub>18:1</sub> <i> ω</i>6<i>c</i>) as their major fatty acids. The genomic DNA G+C contents of strains RHCKP32<sup>T</sup> and RRHST58<sup>T</sup> were 57.33 and 58.77 mol%, respectively. Based on the phenotypic, phylogenetic and chemotaxonomic analyses, they should be considered as two novel species of the genus <i>Pantoea</i>, for which the names <i>Pantoea phosphatilytica</i> sp. nov. and <i>Pantoea phyllosphaerae</i> sp. nov. are proposed with RHCKP32<sup>T</sup> (=GDMCC 1.2672<sup>T</sup>=JCM 34793<sup>T</sup>) and RRHST58<sup>T</sup> (=GDMCC 1.2673<sup>T</sup>=JCM 34797<sup>T</sup>) as the type strains, respectively. In addition, they showed the ability to solubilize inorganic phosphates and produce siderophores, for which the maximum soluble phosphorus concentrations could reach 510.03±7.11 and 506.47±3.08 mg l<sup>-1</sup> for strains RHCKP32<sup>T</sup> and RRHST58<sup>T</sup> after 5 days of inoculation in liquid National Botanical Research Institute's (NBRIP) medium, respectively, and the corresponding relative siderophore production was 21.25±2.23 and 10.20±0.15 percent siderophore unit after 2 days of inoculation in nutrient broth, implicating they might have potential application in promoting plant growth.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 10","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145345224","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Enterococcus infantis sp. nov., isolated from the faeces of an infant with atopic dermatitis. 从患有特应性皮炎的婴儿粪便中分离出的11号婴儿肠球菌。
IF 2 3区 生物学
International journal of systematic and evolutionary microbiology Pub Date : 2025-10-01 DOI: 10.1099/ijsem.0.006950
Chin-Kan Chan, Li-Jyun Tsai, Misa Otoguro, Fujitoshi Yanagida, Yun-Shien Lee, Hui-Chung Wu, Yu-Chung Chang, Yi-Sheng Chen
{"title":"<i>Enterococcus infantis</i> sp. nov., isolated from the faeces of an infant with atopic dermatitis.","authors":"Chin-Kan Chan, Li-Jyun Tsai, Misa Otoguro, Fujitoshi Yanagida, Yun-Shien Lee, Hui-Chung Wu, Yu-Chung Chang, Yi-Sheng Chen","doi":"10.1099/ijsem.0.006950","DOIUrl":"https://doi.org/10.1099/ijsem.0.006950","url":null,"abstract":"<p><p>A Gram-positive, coccal-shaped organism, designated AD013-P3<sup>T</sup>, was isolated from the stool specimen of a 10-month-old male infant with atopic dermatitis (AD). The phylogenetic analysis based on 16S rRNA gene sequences showed that strain AD013-P3<sup>T</sup> was most closely related to <i>Enterococcus diestrammenae</i> (98.7%) and <i>Enterococcus asini</i> (97.8%). Genomic comparisons using pairwise average nucleotide identity and digital DNA-DNA hybridization analyses between strain AD013-P3<sup>T</sup> and <i>E. diestrammenae</i> JCM 18359<sup>T</sup> resulted in values of 75.4-80.4% and 22.1%, respectively. The G+C content of the genomic DNA of strain AD013-P3<sup>T</sup> was 43.5 mol%. Strain AD013-P3<sup>T</sup> is distinguishable from other established <i>Enterococcus</i> species both phylogenetically and phenotypically. Based on the data presented, strain AD013-P3<sup>T</sup> represents a novel species of the genus <i>Enterococcus</i>, for which the name <i>Enterococcus infantis</i> sp. nov. is proposed. The type strain is AD013-P3<sup>T</sup> (=NBRC 117136<sup>T</sup>=BCRC 81462<sup>T</sup>).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 10","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145354908","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Proposal of Allobogoriella gen. nov., Allobogoriella caseilytica comb. nov., Allostella gen. nov., Allostella humosa comb. nov. and Allostella vacuolata comb. nov. as replacement names for the illegitimate prokaryotic names Bogoriella, Bogoriella caseilytica, Stella, Stella humosa and Stella vacuolata, respectively. 同种异博哥里氏菌,干酪样同种异博哥里氏菌梳子的提出。11月,异食草gen. 11月,异食草梳子。11月和液泡异花蝇梳子。11 .分别代替不合法的原核生物名称Bogoriella、Bogoriella caseilytica、Stella、Stella humosa和Stella vacuolata。
IF 2 3区 生物学
International journal of systematic and evolutionary microbiology Pub Date : 2025-10-01 DOI: 10.1099/ijsem.0.006930
Umakant Bhoopati Deshmukh, Aharon Oren
{"title":"Proposal of <i>Allobogoriella</i> gen. nov., <i>Allobogoriella caseilytica</i> comb. nov., <i>Allostella</i> gen. nov., <i>Allostella humosa</i> comb. nov. and <i>Allostella vacuolata</i> comb. nov. as replacement names for the illegitimate prokaryotic names <i>Bogoriella</i>, <i>Bogoriella caseilytica</i>, <i>Stella</i>, <i>Stella humosa</i> and <i>Stella vacuolata</i>, respectively.","authors":"Umakant Bhoopati Deshmukh, Aharon Oren","doi":"10.1099/ijsem.0.006930","DOIUrl":"10.1099/ijsem.0.006930","url":null,"abstract":"<p><p>The prokaryotic generic names <i>Bogoriella</i> Groth <i>et al</i>. 1997 and <i>Stella</i> Vasilyeva 1985 are illegitimate because they are later homonyms of the genus names <i>Bogoriella</i> Zahlbr. 1928 (Ascomycota) and <i>Stella</i> Massee 1889 (Basidiomycota) (Principle 2 and Rule 51b(4) of the International Code of Nomenclature of Prokaryotes). We therefore propose the replacement names <i>Allobogoriella</i> gen. nov., <i>Allobogoriella caseilytica</i> comb. nov., <i>Allobogoriellaceae</i> fam. nov., <i>Allobogoriellales</i> ord. nov., <i>Allostella</i> gen. nov., <i>Allostella humosa</i> comb. nov. and <i>Allostellaceae</i> fam. nov. as replacement names for the illegitimate prokaryotic names <i>Bogoriella</i>, <i>Bogoriella caseilytica</i>, <i>Bogoriellaceae</i>, <i>Bogoriellales</i>, <i>Stella</i>, <i>Stella humosa</i>, <i>Stella vacuolata</i> and <i>Stellaceae</i>, respectively.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 10","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12488387/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145206619","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Caulobacter inopinatus sp. nov., from seawater off O'ahu, Hawai'i, and emended description of the genus Caulobacter. 夏威夷奥胡岛海域的无尾尾杆菌sp. nov.,以及对无尾尾杆菌属的修正描述。
IF 2 3区 生物学
International journal of systematic and evolutionary microbiology Pub Date : 2025-10-01 DOI: 10.1099/ijsem.0.006932
Chiyoko T Onouye, Austin Dubord, Rebecca D Prescott, Thi Hai Au La, Jennifer A Saito, Mia Sadones, Michael H Norris, Stuart P Donachie
{"title":"<i>Caulobacter inopinatus</i> sp. nov., from seawater off O'ahu, Hawai'i, and emended description of the genus <i>Caulobacter</i>.","authors":"Chiyoko T Onouye, Austin Dubord, Rebecca D Prescott, Thi Hai Au La, Jennifer A Saito, Mia Sadones, Michael H Norris, Stuart P Donachie","doi":"10.1099/ijsem.0.006932","DOIUrl":"https://doi.org/10.1099/ijsem.0.006932","url":null,"abstract":"<p><p>A Gram-negative, curved rod and prosthecate bacterium designated as 73W<sup>T</sup> was isolated from seawater collected at an O'ahu, Hawai'i beach. Based on 1,468 nt of the strain's 16S rRNA gene, the nearest neighbours are <i>Caulobacter segnis</i> ATCC 21756<sup>T</sup> (97.4%), <i>Caulobacter rhizosphaerae</i> 7F14<sup>T</sup> (97.5%), <i>Caulobacter vibrioides</i> CB51<sup>T</sup> (97.3%), 'Caulobacter zeae' 410<sup>T</sup> (1,402/1,440, 97.4%), <i>Caulobacter mirabilis</i> FWC 38<sup>T</sup> (1,398/1,435, 97.4%) and 'Caulobacter endophyticus' 774<sup>T</sup> (97.3%). Cells are motile by a single polar flagellum. The strain is oxidase and catalase positive, aerobic and microaerophilic and grows between 6 and 39 °C. Major fatty acids in whole cells of 73W<sup>T</sup> are cis-11-octadecenoic acid/cis-12-octadecenoic acid (50.6%) and hexadecenoic acid (18.2%). The G+C content of the genome is 67.6%. Based on phenotypic and genotypic differences between strain 73W<sup>T</sup> and extant <i>Caulobacter</i> species, we propose that strain 73W<sup>T</sup> represents a novel <i>Caulobacter</i> species, for which the name <i>Caulobacter inopinatus</i> sp. nov. is proposed to accommodate strain 73W<sup>T</sup> as the type strain (DSM 112346<sup>T</sup>=LMG 33179<sup>T</sup>=NCTC 14601<sup>T</sup>). The description of the genus <i>Caulobacter</i> is emended to reflect the presence in all species of 3-hydroxydodecanoic acid and hexadecanoic acid.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 10","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145300831","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparative genomics and ecological insights into Nonomuraea turcica sp. nov., an actinomycete from Black Sea island soil. turcica noonomuraea sp.的比较基因组学和生态学见解 nov.。一种来自黑海岛屿土壤的放线菌。
IF 2 3区 生物学
International journal of systematic and evolutionary microbiology Pub Date : 2025-10-01 DOI: 10.1099/ijsem.0.006938
Hayrettin Saygin
{"title":"Comparative genomics and ecological insights into <i>Nonomuraea turcica</i> sp. nov., an actinomycete from Black Sea island soil.","authors":"Hayrettin Saygin","doi":"10.1099/ijsem.0.006938","DOIUrl":"10.1099/ijsem.0.006938","url":null,"abstract":"<p><p>A polyphasic study was undertaken to characterize strain G32<sup>T</sup>, an actinomycete isolated from soil collected on Giresun Island (Black Sea, Turkey). 16S rRNA phylogeny placed the strain within the genus <i>Nonomuraea</i>, but ≤99.1% similarity to its nearest type strains, <i>Nonomuraea turkmeniaca</i> DSM 43926<sup>T</sup>, <i>Nonomuraea aridisoli</i> KC333<sup>T</sup>, <i>Nonomuraea candida</i> NRRL B-24552<sup>T</sup>, <i>Nonomuraea polychroma</i> DSM 43925<sup>T</sup> and <i>Nonomuraea endophytica</i> DSM 45385<sup>T</sup>, suggested that it potentially represents a novel taxon. The total genome size is about 12.66 Mb, and the digital G+C content is 69.6 mol%. The high-quality draft genome shared ≤92.16% average nucleotide identity and ≤47.0% digital DNA-DNA hybridization with the closest related type strains, corroborating species-level distinctness. Comparative genomics against four type strains, <i>N. turkmeniaca</i> DSM 43926<sup>T</sup>, <i>N. polychrom</i> DSM 43925<sup>T</sup>, <i>N. aridisoli</i> KC333<sup>T</sup> and <i>N. endophytica</i> DSM 45385<sup>T</sup>, revealed an open pangenome of 24,056 orthologous families, of which G32<sup>T</sup> contributed 2,785 singletons. Copy-number expansion of <i>aqpZ</i> with four paralogues and <i>efeB</i> with three paralogues, together with the sole genome-wide occurrence of ACC-deaminase and an additional <i>fhu</i>DBC siderophore transporter, highlights adaptations to periodic salinity, iron limitation and rhizosphere contact in island soil. Chemotaxonomic markers (<i>meso</i>-diaminopimelic, madurose, MK-9(H<sub>4</sub>), <i>iso</i>-C<sub>16 : 0</sub>, <i>iso</i>-C<sub>16 : 0</sub> 2OH and C<sub>17 : 0</sub> 10-<i>methyl</i>) of the strain were consistent with the genus <i>Nonomuraea</i>, but phenotypic traits further differentiated the isolate from its relatives. Based on the evidence presented here, strain G32<sup>T</sup> represents a novel species of the genus <i>Nonomuraea</i>, for which the name <i>Nonomuraea turcica</i> sp. nov. is proposed. The type strain of the species is G32<sup>T</sup> (=KCTC 49887<sup>T</sup>=CGMCC 4.7873<sup>T</sup>).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 10","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145237870","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Aureibaculum koreense sp. nov. and Aureibaculum conchae sp. nov., isolated from the marine molluscs. 从海洋软体动物中分离出的韩国Aureibaculum sp. 11 .和conchae sp. 11 .。
IF 2 3区 生物学
International journal of systematic and evolutionary microbiology Pub Date : 2025-10-01 DOI: 10.1099/ijsem.0.006933
Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
{"title":"<i>Aureibaculum koreense</i> sp. nov. and <i>Aureibaculum conchae</i> sp. nov., isolated from the marine molluscs.","authors":"Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park","doi":"10.1099/ijsem.0.006933","DOIUrl":"https://doi.org/10.1099/ijsem.0.006933","url":null,"abstract":"<p><p>Facultative anaerobic Gram-negative bacteria, designated strains 2210JD6-5<sup>T</sup> and 2308TA14-22<sup>T</sup>, were isolated from a seashell and a marine conch, respectively, in the Republic of Korea, and subjected to detailed taxonomic analysis. The cells exhibited catalase and oxidase activity, were non-motile and were rod-shaped. Both novel strains were mesophilic, grew optimally at neutral pH and were slightly halophilic. Phylogenetic analyses based on 16S rRNA gene and whole-genome sequences demonstrated that strains 2210JD6-5<sup>T</sup> and 2308TA14-22<sup>T</sup> were affiliated with the genus <i>Aureibaculum</i>. The digital DNA-DNA hybridization and average nucleotide identity values between strains 2210JD6-5<sup>T</sup> and 2308TA14-22<sup>T</sup> and type strains of the most closely related species were below the cut-off thresholds. Both strains possessed DNA G+C contents of 33.5 mol%. The predominant cellular fatty acids and the sole respiratory quinone in these two strains were iso-C<sub>15 : 0</sub>, iso-C<sub>15 : 1</sub> G and iso-C<sub>17 : 0</sub> 3-OH and MK-6, respectively. Strains 2210JD6-5<sup>T</sup> and 2308TA14-22<sup>T</sup> shared polar lipids, such as phosphoethanolamine, aminophospholipid, unidentified aminolipid and unidentified lipid. Based on phylogenetic, genomic relatedness and chemotaxonomic characteristics, strains 2210JD6-5<sup>T</sup> and 2308TA14-22<sup>T</sup> represent a novel species within the genus <i>Aureibaculum</i>, for which the names <i>Aureibaculum koreense</i> sp. nov. (2210JD6-5<sup>T</sup>=KCTC 102167<sup>T</sup>=JCM 37322<sup>T</sup>) and <i>Aureibaculum conchae</i> sp. nov. (2308TA14-22<sup>T</sup>=KCTC 102250<sup>T</sup>=JCM 37321<sup>T</sup>) are proposed.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 10","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145225077","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Alteromonas algae sp. nov. and Alteromonas ulvae sp. nov., isolated from the seaweed Ulva prolifera dominating green tides in the Yellow Sea. 从黄海绿潮中占主导地位的浒苔藻中分离出的藻异单胞菌和藻异单胞菌。
IF 2 3区 生物学
International journal of systematic and evolutionary microbiology Pub Date : 2025-10-01 DOI: 10.1099/ijsem.0.006925
Xiaojing Lv, Jin Zhao, Peng Jiang
{"title":"<i>Alteromonas algae</i> sp. nov. and <i>Alteromonas ulvae</i> sp. nov., isolated from the seaweed <i>Ulva prolifera</i> dominating green tides in the Yellow Sea.","authors":"Xiaojing Lv, Jin Zhao, Peng Jiang","doi":"10.1099/ijsem.0.006925","DOIUrl":"10.1099/ijsem.0.006925","url":null,"abstract":"<p><p>Strains A079<sup>T</sup> and A081<sup>T</sup> were isolated from the floating seaweed <i>Ulva prolifera</i>, which is the dominant species of the world's largest green tides in the Yellow Sea. Both strains were Gram-stain-negative, aerobic and motile via a single polar flagellum. The major fatty acids of the two strains were C<sub>16:0</sub>, C<sub>17:1</sub> ω8c, C<sub>18:1</sub> ω7c and summed feature 3 (C<sub>16:1</sub> ω7c and/or C<sub>16:1</sub> ω6c). Cells of the strain A079<sup>T</sup> were oval or short rod-shaped. Cells of the strain A081<sup>T</sup> were rod-shaped. A079<sup>T</sup> grew at 10-37 °C, pH 6.0-10.0 and 1-12% (w/v) NaCl. A081<sup>T</sup> grew at 10-40 °C, pH 6.0-11.0 and 1-12% (w/v) NaCl. Phylogenetic analyses based on 16S rRNA genes and whole-genome sequences revealed that strains A079<sup>T</sup> and A081<sup>T</sup> belong to the genus <i>Alteromonas</i>. The average nucleotide identity and digital DNA-DNA hybridization values between strains A079<sup>T</sup>, A081<sup>T</sup> and related <i>Alteromonas</i> species ranged from 68.98 to 88.75% and 20.40 to 36.40%, respectively. Comparative genomic analysis discovered that A079<sup>T</sup> possessed a unique RiPP-like (TP-1161) cluster. Strain A089<sup>T</sup> exhibited the potential to utilize ulvan, and an acyl-homoserine lactone synthesis gene cluster was predicted in the strain. These findings reveal possible mechanisms for phycosphere adaptation. Phenotypic, chemotaxonomic, phylogenetic and genomic evidence support that strains A079<sup>T</sup> and A081<sup>T</sup> represent two novel species of the genus <i>Alteromonas</i>, for which the names <i>Alteromonas algae</i> sp. nov. (type strain A079<sup>T</sup>=MCCC 1K09912<sup>T</sup>=KCTC 18157<sup>T</sup>) and <i>Alteromonas ulvae</i> sp. nov. (type strain A081<sup>T</sup>=MCCC 1K09913<sup>T</sup>=KCTC 18158<sup>T</sup>) are proposed.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 10","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145199309","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Notification that new names of prokaryotes, new combinations and new taxonomic opinions have appeared in volume 75, part 6 of the IJSEM. 原核生物的新名称、新组合和新的分类学观点已出现在IJSEM第75卷第6部分的通知。
IF 2 3区 生物学
International journal of systematic and evolutionary microbiology Pub Date : 2025-10-01 DOI: 10.1099/ijsem.0.006862
Aharon Oren, Markus Göker
{"title":"Notification that new names of prokaryotes, new combinations and new taxonomic opinions have appeared in volume 75, part 6 of the <i>IJSEM</i>.","authors":"Aharon Oren, Markus Göker","doi":"10.1099/ijsem.0.006862","DOIUrl":"10.1099/ijsem.0.006862","url":null,"abstract":"","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 9","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12513816/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145274515","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
List of Recommended Names for bacteria of medical importance: report of the Ad Hoc Committee on Mitigating Changes in Prokaryotic Nomenclature. 具有医学重要性的细菌推荐名称清单:减轻原核生物命名法变化特设委员会的报告。
IF 2 3区 生物学
International journal of systematic and evolutionary microbiology Pub Date : 2025-10-01 DOI: 10.1099/ijsem.0.006943
Markus Göker, Henrik Christensen, Volker Fingerle, Marko Kostovski, Gabriele Margos, Edward R B Moore, Aharon Oren, Sheila Patrick, Udo Reischl, José A Vázquez-Boland
{"title":"List of Recommended Names for bacteria of medical importance: report of the Ad Hoc Committee on Mitigating Changes in Prokaryotic Nomenclature.","authors":"Markus Göker, Henrik Christensen, Volker Fingerle, Marko Kostovski, Gabriele Margos, Edward R B Moore, Aharon Oren, Sheila Patrick, Udo Reischl, José A Vázquez-Boland","doi":"10.1099/ijsem.0.006943","DOIUrl":"10.1099/ijsem.0.006943","url":null,"abstract":"<p><p>The Ad Hoc Committee on Mitigating Changes in Prokaryotic Nomenclature was recently established under the auspices of the International Committee on Systematics of Prokaryotes to address the impact of name changes of prokaryotic taxa in databases, scientific publications and other sources, particularly agencies responsible for establishing protocols and standards for infectious disease control. Here, we report on the activities of the committee and the actions taken to date. A first key task of the Committee was to emphasize to stakeholders that the vast majority of name changes are not mandatory under the International Code of Nomenclature of Prokaryotes (ICNP), and to provide guidance. The second key task was to compile a List of Recommended Names (LoRN) for bacteria of human or veterinary medical importance. This list has been incorporated into the List of Prokaryotic names with Standing in Nomenclature (LPSN) and is easily and freely available from LPSN. The principles for compiling and updating the list are described. Use of this list, rather than automatically treating the most recently proposed name of a taxon that has obtained standing under the ICNP as the name to be applied to the taxon, will greatly reduce the burden on practitioners who need to use prokaryotic names, e.g. in human and veterinary medical routines, and the risk associated with new, unfamiliar names. Other databases are encouraged to use LoRN.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 10","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145345186","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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