Chahrazed Belhout, Fangkun Wang, Alexandra Rossano, Alexandra Collaud, Javier E Fernandez, Emma Marchionatti, Jennifer Eleonora Keller, Gudrun Overesch, Sabine Kaessmeyer, Sybille Schwendener, Vincent Perreten
{"title":"从不同动物来源分离的动物大球菌和马大球菌。","authors":"Chahrazed Belhout, Fangkun Wang, Alexandra Rossano, Alexandra Collaud, Javier E Fernandez, Emma Marchionatti, Jennifer Eleonora Keller, Gudrun Overesch, Sabine Kaessmeyer, Sybille Schwendener, Vincent Perreten","doi":"10.1099/ijsem.0.006861","DOIUrl":null,"url":null,"abstract":"<p><p>Nine Gram-positive, non-motile, facultatively anaerobic cocci, designated EM39Eᵀ, JEK85, 18KM676, 21M1142, 18KM445<sup>T</sup>, 18KM444, 18KM245, 18KM583 and 21KM1573, were isolated from diverse animal material, including horse and pig skin, bovine mastitis milk and feline urine from a urinary tract infection. Phylogenomic analysis based on amino-acid alignment obtained from translated whole-genome sequences; digital DNA-DNA hybridization (dDDH); 16S rRNA, <i>dnaJ</i>, <i>hsp60</i>, <i>rpoB</i> and <i>sodA</i> gene comparison; and MALDI-TOF MS spectral profiles placed the strains within the <i>Macrococcus caseolyticus</i> clade. They were closely related to <i>Macrococcus bohemicus</i> CCM 7100ᵀ, <i>Macrococcus epidermidis</i> CCM 7099ᵀ, <i>Macrococcus goetzii</i> CCM 4927ᵀ and <i>Macrococcus capreoli</i> DSM 113939<sup>T</sup>. The novel species exhibited 22.30% dDDH and 79.49% average nucleotide identity (ANI) to each other, <24% dDDH and <82% ANI to their closest relatives, values below established species delineation thresholds, confirming their classification as two distinct novel species. Chemotaxonomic analysis identified, in both species, diphosphatidylglycerol, phosphatidylglycerol, aminolipid, glycolipids and phosphoglycolipids, as the major polar lipids. Fatty acid profiling revealed C<sub>14 : 0</sub>, C<sub>16 : 1</sub> ω11c, C<sub>16 : 0</sub> and C<sub>18 : 1</sub> ω13c as predominant components, with antesio-C<sub>15 : 0</sub> in one species. The peptidoglycan type was A3α l-Lys-Gly2. The novel species can be distinguished from their closest relatives by their ability to grow in 12.5% NaCl. EM39Eᵀ, JEK85, 18KM676 and 21M1142 can be distinguished by positive reaction to d-ribose, and 18KM445<sup>T</sup>, 18KM444, 18KM245, 18KM583 and 21KM1573 by the absence of <i>α</i>-glucosidase activity and acid production from methyl-<i>β</i>-d-glucopyranoside and maltose. The two novel species can be differentiated from each other by d-ribose metabolism and methyl-<i>β</i>-d-glucopyranoside hydrolysis. 18KM445<sup>T</sup>, 18KM444, 18KM245, 18KM583 and 21KM1573 formed a distinct cluster of strains, designated <i>Macrococcus equi</i> sp. nov., with strain 18KM445ᵀ (=DSM 118744ᵀ; =CCOS 2124ᵀ; =CCM 9438ᵀ) as the proposed type strain. The second cluster, containing strains EM39Eᵀ, JEK85, 18KM676 and 21M1142, was designated <i>Macrococcus animalis</i> sp. nov., with strain EM39Eᵀ (=DSM 118743ᵀ; =CCOS 2125ᵀ; =CCM 9439ᵀ) as the proposed type strain.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 7","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Macrococcus animalis</i> sp. nov. and <i>Macrococcus equi</i> sp. nov., isolated from different animals' origins.\",\"authors\":\"Chahrazed Belhout, Fangkun Wang, Alexandra Rossano, Alexandra Collaud, Javier E Fernandez, Emma Marchionatti, Jennifer Eleonora Keller, Gudrun Overesch, Sabine Kaessmeyer, Sybille Schwendener, Vincent Perreten\",\"doi\":\"10.1099/ijsem.0.006861\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Nine Gram-positive, non-motile, facultatively anaerobic cocci, designated EM39Eᵀ, JEK85, 18KM676, 21M1142, 18KM445<sup>T</sup>, 18KM444, 18KM245, 18KM583 and 21KM1573, were isolated from diverse animal material, including horse and pig skin, bovine mastitis milk and feline urine from a urinary tract infection. Phylogenomic analysis based on amino-acid alignment obtained from translated whole-genome sequences; digital DNA-DNA hybridization (dDDH); 16S rRNA, <i>dnaJ</i>, <i>hsp60</i>, <i>rpoB</i> and <i>sodA</i> gene comparison; and MALDI-TOF MS spectral profiles placed the strains within the <i>Macrococcus caseolyticus</i> clade. They were closely related to <i>Macrococcus bohemicus</i> CCM 7100ᵀ, <i>Macrococcus epidermidis</i> CCM 7099ᵀ, <i>Macrococcus goetzii</i> CCM 4927ᵀ and <i>Macrococcus capreoli</i> DSM 113939<sup>T</sup>. The novel species exhibited 22.30% dDDH and 79.49% average nucleotide identity (ANI) to each other, <24% dDDH and <82% ANI to their closest relatives, values below established species delineation thresholds, confirming their classification as two distinct novel species. Chemotaxonomic analysis identified, in both species, diphosphatidylglycerol, phosphatidylglycerol, aminolipid, glycolipids and phosphoglycolipids, as the major polar lipids. Fatty acid profiling revealed C<sub>14 : 0</sub>, C<sub>16 : 1</sub> ω11c, C<sub>16 : 0</sub> and C<sub>18 : 1</sub> ω13c as predominant components, with antesio-C<sub>15 : 0</sub> in one species. The peptidoglycan type was A3α l-Lys-Gly2. The novel species can be distinguished from their closest relatives by their ability to grow in 12.5% NaCl. EM39Eᵀ, JEK85, 18KM676 and 21M1142 can be distinguished by positive reaction to d-ribose, and 18KM445<sup>T</sup>, 18KM444, 18KM245, 18KM583 and 21KM1573 by the absence of <i>α</i>-glucosidase activity and acid production from methyl-<i>β</i>-d-glucopyranoside and maltose. The two novel species can be differentiated from each other by d-ribose metabolism and methyl-<i>β</i>-d-glucopyranoside hydrolysis. 18KM445<sup>T</sup>, 18KM444, 18KM245, 18KM583 and 21KM1573 formed a distinct cluster of strains, designated <i>Macrococcus equi</i> sp. nov., with strain 18KM445ᵀ (=DSM 118744ᵀ; =CCOS 2124ᵀ; =CCM 9438ᵀ) as the proposed type strain. The second cluster, containing strains EM39Eᵀ, JEK85, 18KM676 and 21M1142, was designated <i>Macrococcus animalis</i> sp. nov., with strain EM39Eᵀ (=DSM 118743ᵀ; =CCOS 2125ᵀ; =CCM 9439ᵀ) as the proposed type strain.</p>\",\"PeriodicalId\":14390,\"journal\":{\"name\":\"International journal of systematic and evolutionary microbiology\",\"volume\":\"75 7\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International journal of systematic and evolutionary microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006861\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006861","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Macrococcus animalis sp. nov. and Macrococcus equi sp. nov., isolated from different animals' origins.
Nine Gram-positive, non-motile, facultatively anaerobic cocci, designated EM39Eᵀ, JEK85, 18KM676, 21M1142, 18KM445T, 18KM444, 18KM245, 18KM583 and 21KM1573, were isolated from diverse animal material, including horse and pig skin, bovine mastitis milk and feline urine from a urinary tract infection. Phylogenomic analysis based on amino-acid alignment obtained from translated whole-genome sequences; digital DNA-DNA hybridization (dDDH); 16S rRNA, dnaJ, hsp60, rpoB and sodA gene comparison; and MALDI-TOF MS spectral profiles placed the strains within the Macrococcus caseolyticus clade. They were closely related to Macrococcus bohemicus CCM 7100ᵀ, Macrococcus epidermidis CCM 7099ᵀ, Macrococcus goetzii CCM 4927ᵀ and Macrococcus capreoli DSM 113939T. The novel species exhibited 22.30% dDDH and 79.49% average nucleotide identity (ANI) to each other, <24% dDDH and <82% ANI to their closest relatives, values below established species delineation thresholds, confirming their classification as two distinct novel species. Chemotaxonomic analysis identified, in both species, diphosphatidylglycerol, phosphatidylglycerol, aminolipid, glycolipids and phosphoglycolipids, as the major polar lipids. Fatty acid profiling revealed C14 : 0, C16 : 1 ω11c, C16 : 0 and C18 : 1 ω13c as predominant components, with antesio-C15 : 0 in one species. The peptidoglycan type was A3α l-Lys-Gly2. The novel species can be distinguished from their closest relatives by their ability to grow in 12.5% NaCl. EM39Eᵀ, JEK85, 18KM676 and 21M1142 can be distinguished by positive reaction to d-ribose, and 18KM445T, 18KM444, 18KM245, 18KM583 and 21KM1573 by the absence of α-glucosidase activity and acid production from methyl-β-d-glucopyranoside and maltose. The two novel species can be differentiated from each other by d-ribose metabolism and methyl-β-d-glucopyranoside hydrolysis. 18KM445T, 18KM444, 18KM245, 18KM583 and 21KM1573 formed a distinct cluster of strains, designated Macrococcus equi sp. nov., with strain 18KM445ᵀ (=DSM 118744ᵀ; =CCOS 2124ᵀ; =CCM 9438ᵀ) as the proposed type strain. The second cluster, containing strains EM39Eᵀ, JEK85, 18KM676 and 21M1142, was designated Macrococcus animalis sp. nov., with strain EM39Eᵀ (=DSM 118743ᵀ; =CCOS 2125ᵀ; =CCM 9439ᵀ) as the proposed type strain.
期刊介绍:
Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names.
The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including:
Identification, characterisation and culture preservation
Microbial evolution and biodiversity
Molecular environmental work with strong taxonomic or evolutionary content
Nomenclature
Taxonomy and phylogenetics.