Reclassification of [Pasteurella] langaaensis as Alitibacter langaaensis gen. nov., comb. nov.

IF 2 3区 生物学 Q4 MICROBIOLOGY
Magne Bisgaard, Henrik Christensen
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引用次数: 0

Abstract

[Pasteurella] langaaensis has been found to be polyphyletic in relation to the type species Pasteurella multocida, as endicated by 16S rRNA gene sequence comparisons and a number of other comparisons (enclosing the genus name in brackets). 16S rRNA gene sequence-based phylogeny confirmed that [P.] langaaensis is unrelated to other members of Pasteurellaceae at the genus level and may be a candidate for a new genus with 95% 16S rRNA gene sequence identity to the closest related sequence belonging to the type strain of [Actinobacillus] rossii. The highest digital DNA-DNA hybridization value predicted from the whole-genomic sequence of the type strain of [P.] langaaensis was to the type strain of Acinobacillus suis with 26%, confirming a separate taxonomic status at the species level. The phylogenetic comparison of concatenated conserved protein sequences determined in a previous study showed a unique position of the taxon investigated, which qualified for the status of a new genus since the highest conserved protein sequence identity was found to [A.] rossii with 86%. A new genus with one species, Alitibacter langaaensis gen. nov., comb. nov., is proposed. The genus can be separated from other genera in the family Pasteurellaceae by from 1 up to 12 phenotypic characters, and it is monotypic from other genera with respect to analysis of 16S rRNA gene sequences as well as of predicted core genomic proteins. The type strain of Alitibacter langaaensis is F73T (=NCTC 11411T=CCUG 15566T=DSM 22999T=CPI 102678T=ATCC 43328T).

langaaensis的重新分类[Pasteurella]为Alitibacter langaaensis gen. nov.,梳理。11月。
通过对16S rRNA基因序列的比较和其他一些比较(方括号中包含了属名),我们发现langaaensis与多杀性巴氏杆菌(Pasteurella multocida)有多系关系。基于16S rRNA基因序列的系统发育证实[P。langaaensis在属水平上与巴氏杆菌科的其他成员无关,可能是一个新属的候选物种,其16S rRNA基因序列与rossii放线菌类型菌株最接近的序列具有95%的同源性。利用全基因组序列预测的最高数字DNA-DNA杂交值[P。langaaensis与猪动杆菌(Acinobacillus suis)型菌株的比例为26%,在种水平上具有独立的分类地位。对先前研究中确定的串联保守蛋白序列的系统发育比较表明,所调查的分类群具有独特的位置,由于发现最高的保守蛋白序列一致性为[a],因此符合新属的地位。罗西的支持率为86%。一新属一种,Alitibacter langaaensis gen. nov.,梳子。建议11月11日。该属与巴氏杆菌科其他属具有1 ~ 12个表型特征,在16S rRNA基因序列分析和预测的核心基因组蛋白分析上与其他属具有单型特征。langaaensis的类型菌株为F73T (=NCTC 11411T=CCUG 15566T=DSM 22999T=CPI 102678T=ATCC 43328T)。
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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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