Frontiers in Plant Science最新文献

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DH2-dependent trans-acting siRNAs regulate leaf and lemma development in rice.
IF 4.1 2区 生物学
Frontiers in Plant Science Pub Date : 2025-01-27 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1534038
Jun Tang, Tianye Li, Yuanzhuo Gao, Xinghang Li, Ziheng Huang, Hui Zhuang, Guanghua He, Hongfa Luo, Yunfeng Li
{"title":"<i>DH2</i>-dependent trans-acting siRNAs regulate leaf and lemma development in rice.","authors":"Jun Tang, Tianye Li, Yuanzhuo Gao, Xinghang Li, Ziheng Huang, Hui Zhuang, Guanghua He, Hongfa Luo, Yunfeng Li","doi":"10.3389/fpls.2024.1534038","DOIUrl":"10.3389/fpls.2024.1534038","url":null,"abstract":"<p><p>In most crops, the development of lateral organs such as leaves and floral organs plays important roles in the architecture of plants and grains and then determines the yield. Establishment of polarity in these lateral organs is one of the most critical events for their morphogenesis. However, the molecular mechanisms regarding this in rice remain unclear. Here, we isolated two allelic mutants named <i>degenerated hull 2-1</i> and <i>degenerated hull 2-2</i> (<i>dh2-1</i> and <i>dh2-2</i>) in rice, exhibiting abaxially rolled leaves and rod-shaped lemmas. <i>DH2</i> encoded the relatively conservative ARGONAUT 7 (AGO7) protein in plants and expressed in the lateral organs including leaf and floral organs. In addition, the overexpression lines of <i>DH2</i> showed adaxially rolled leaves. Next, it was proved that <i>DH2</i> was involved in the synthesis of <i>tasiR-ARFs</i>, the expression level of which was decreased sharply in lateral organs of <i>dh2</i> mutants. Then, it was found that the expression of <i>OsARF2, OsARF3, OsARF14</i>, and <i>OsARF15</i>, the potential targets of <i>tasiR-ARFs</i>, was increased in lateral organs of <i>dh2</i> mutants. However, it was not expected that the results of <i>in situ</i> hybridization showed that the four <i>ARF</i> genes were not expressed in WT lemma, whereas they were all ectopically expressed in rod-shaped lemma in <i>dh2</i> mutants. Meanwhile, <i>tasiR-ARFs</i> were expressed in the whole lemma but not in the abaxial side. This means that there was no opposite expression of <i>tasiR-ARFs</i> and <i>ARFs</i> in the adaxial-abaxial of lemma. Therefore, according to our data, we believe that the pathway of OsAGO7-tasiR-ARFs in rice was more likely involved in the development of the whole lemma, not only the abaxial side, by restricting the ectopic expression of <i>OsARFs</i> in the whole lemma, which was different from that in the lateral organs of Arabidopsis.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"15 ","pages":"1534038"},"PeriodicalIF":4.1,"publicationDate":"2025-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11808002/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143390593","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Interaction between arbuscular mycorrhizal fungi and dark septate endophytes in the root systems of Populus euphratica and Haloxylon ammodendron under different drought conditions in Xinjiang, China.
IF 4.1 2区 生物学
Frontiers in Plant Science Pub Date : 2025-01-27 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1504650
Huimei Wang, Hengfang Wang, Shengtao Wei, Li Sun, Linlin Cheng
{"title":"Interaction between arbuscular mycorrhizal fungi and dark septate endophytes in the root systems of <i>Populus euphratica</i> and <i>Haloxylon ammodendron</i> under different drought conditions in Xinjiang, China.","authors":"Huimei Wang, Hengfang Wang, Shengtao Wei, Li Sun, Linlin Cheng","doi":"10.3389/fpls.2024.1504650","DOIUrl":"10.3389/fpls.2024.1504650","url":null,"abstract":"<p><strong>Background and aims: </strong>Arbuscular mycorrhizal fungi (AMF) and dark septate endophytes (DSE) are known to enhance the tolerance of host plants to biotic and abiotic stresses, but the mechanism of their interaction under natural conditions has not been extensively studied.</p><p><strong>Methods: </strong>We analyzed the endophytic fungal diversity and colonization characteristics in the typical desert plants <i>Populus euphratica</i> and <i>Haloxylon ammodendron</i> and the relationship between them and environmental factors.</p><p><strong>Results: </strong>Except for DSE in the roots of <i>H. ammodendron</i>, the colonization rates of AMF and DSE were significantly positively correlated with drought severity. The abundance of AMF and DSE under medium and mild drought conditions was greater than that under severe drought conditions. The root colonization rate and abundance of AMF were lower than those of DSE under the same drought conditions. The species diversity and abundance of AMF and DSE in <i>P. euphratica</i> were greater than those in <i>H. ammodendron</i>. AMF were more susceptible to soil factors such as soil water content, soil nitrogen and phosphorus content, and urease, whereas DSE were more affected by pH.</p><p><strong>Conclusion: </strong>Drought stress has different effects on AMF and DSE in the roots of <i>P. euphratica</i> and <i>H. ammodendron</i>. DSE have a greater advantage in extremely arid environments. This study demonstrates the interaction between AMF and DSE with the host plants <i>P. euphratica</i> and <i>H. ammodendron</i> as well as their effects on the adaptation of host plants to the desert environment, which can provide a basis for strengthening desert vegetation management.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"15 ","pages":"1504650"},"PeriodicalIF":4.1,"publicationDate":"2025-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11808033/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143390608","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Design and testing of a posture-adjusting precision metering device for high-speed maize planting.
IF 4.1 2区 生物学
Frontiers in Plant Science Pub Date : 2025-01-27 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1458597
Jianxin Dong, Xiaojun Gao, Zhouzhou Zheng, Pengfei Zhao, Yubin Bi, Yuxiang Huang
{"title":"Design and testing of a posture-adjusting precision metering device for high-speed maize planting.","authors":"Jianxin Dong, Xiaojun Gao, Zhouzhou Zheng, Pengfei Zhao, Yubin Bi, Yuxiang Huang","doi":"10.3389/fpls.2025.1458597","DOIUrl":"10.3389/fpls.2025.1458597","url":null,"abstract":"<p><strong>Introduction: </strong>This study introduces a new technical method that involves adjusting the seed-filling posture and fluidizing the seed group to improve the capacity of mechanical seed-metering devices for high-speed maize planting. The design of a novel posture-adjusting seed-metering device is presented and its operating principle is described. In the seed-filling area, the seeds maintain the same postural characteristics and are detached from the seed group. This method creates favorable conditions for mechanical seed-metering devices to achieve effective seed-filling under high-speed planting conditions.</p><p><strong>Methods: </strong>Firstly, the key parameters of the core component were analyzed. Secondly, the influences of the seed posture adjusting efficiency and seed flow distribution characteristics on the seed-filling effect were clarified by the EDEM simulation. Finally, the high-speed metering performance was optimized and validated using bench testing.</p><p><strong>Results: </strong>The experiment demonstrated that the type A groove had the highest seed posture adjusting efficiency, a more uniform seed flow distribution, and a superior seed-filling effect as compared to the other groove types. The best metering performance was achieved with an opening angle of 21.6° and an opening width of 8.4 mm; this resulted in pass, repeat, and leak rates of 94.8%, 1.3%, and 3.9%, respectively. Within the speed range of 8-14 km/h, the posture-adjusting seed-metering device demonstrated a pass rate of over 94%, a repeat rate below 2.1%, and a leak rate below 3.9%.</p><p><strong>Discussion: </strong>The designed device had a better high-speed planting capacity than a seed-metering device without a posture-adjusting mechanism, thus proving the effectiveness of the novel seed-filling method. These findings provide a reference for improving the high-speed planting capacity of mechanical seed-metering devices.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"16 ","pages":"1458597"},"PeriodicalIF":4.1,"publicationDate":"2025-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11807980/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143390377","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Integrative analyses of morpho-physiological, biochemical, and transcriptomic reveal the seedling growth response of Pinus yunnanensis to nitrogen and phosphorus fertilization.
IF 4.1 2区 生物学
Frontiers in Plant Science Pub Date : 2025-01-27 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1405638
Junfei Xu, Xiyan Li, Shi Chen, Lin Chen, Junrong Tang, Peizhen Chen, Nianhui Cai, Yulan Xu
{"title":"Integrative analyses of morpho-physiological, biochemical, and transcriptomic reveal the seedling growth response of <i>Pinus yunnanensis</i> to nitrogen and phosphorus fertilization.","authors":"Junfei Xu, Xiyan Li, Shi Chen, Lin Chen, Junrong Tang, Peizhen Chen, Nianhui Cai, Yulan Xu","doi":"10.3389/fpls.2024.1405638","DOIUrl":"10.3389/fpls.2024.1405638","url":null,"abstract":"<p><p>Appropriate nitrogen (N) and phosphorus (P) fertilization is critical for plant growth and production. <i>Pinus yunnanensis</i>, a silvicultural tree in southwestern China, faces economic and ecological limitations due to nutrient deficiency in the soils in its distribution areas. The slow growth of this species during the seedling stage exacerbates these problems. Therefore, it is important to realize the regulating effects of N and P proportioning fertilization on seedling growth to enhance nutrient-use efficiency. In this study, variations in morphological, physiological, and biochemical characteristics of seedlings were analyzed under nine treatments of NP proportioning in an open nursery using a regression design. Growth in height and basal diameter increased and showed an approximate tendency in all treatments. The maximum biomass accumulation was observed at 480 d after treatment in roots of T5 (14.714 g) (application N 0.4 g·per<sup>-1</sup> and P 3 g·per<sup>-1</sup>), stems of T5 (12.654 g), leaves of T9 (24.261 g) (application N 0.8 g·per<sup>-1</sup> and P 6 g·per<sup>-1</sup>), aboveground parts of T9 (35.402 g) and individuals of T5 (49 g). The total chlorophyll content peaked in the leaves at 120 d and was correlated with the peak levels of N, P, and K in leaves. The content and reserves of nutrient elements in the organs of seedlings subjected to NP proportioning were significantly higher than those in unfertilized seedlings. Analysis of nutrient utilization efficiency revealed that T5 demonstrated superior seedling growth performance. Appropriate fertilization dosage of N and P for <i>P. yunnanensis</i> seedlings in this study was 0.32 g·per<sup>-1</sup>-0.58 g·per<sup>-1</sup> and 3.02 g·per<sup>-1</sup>-4.95 g·per<sup>-1</sup> respectively, using path analysis and regression equation. Transcriptomic sequencing revealed that there were 2,301 DEGs between T5 and T1 (control), which were involved in the uptake and assimilation of nutrients, biosynthesis of phytohormones and secondary metabolites, and photosynthesis. Additionally, the abundance of genes involved in cell division and proliferation, cellulose biosynthesis, and cell wall extension were dramatically upregulated, which potentially correlated with enhanced seedling growth. In conclusion, this study provides comprehensive information on the response of seedlings to varying proportions of N and P and may promote the growth of <i>P. yunnanensis</i> seedlings by optimizing the proportion of N and P in fertilizers.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"15 ","pages":"1405638"},"PeriodicalIF":4.1,"publicationDate":"2025-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11807977/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143390607","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The transcriptional analysis of pepper shed light on a proviral role of light-harvesting chlorophyll a/b binding protein 13 during infection of pepper mild mottle virus.
IF 4.1 2区 生物学
Frontiers in Plant Science Pub Date : 2025-01-27 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1533151
Weihong Lin, Shugen Zhang, Hao Zhang, Xiaomei Deng, Tong Jiang, Xifeng Chen, Laihua Dong, Qin Yan, Lianyi Zang, Yongping Xing, Zhenquan Wang, Qin Zhang, Kaitong Du, Huolin Shen, Junmin Zhang, Tao Zhou
{"title":"The transcriptional analysis of pepper shed light on a proviral role of light-harvesting chlorophyll a/b binding protein 13 during infection of pepper mild mottle virus.","authors":"Weihong Lin, Shugen Zhang, Hao Zhang, Xiaomei Deng, Tong Jiang, Xifeng Chen, Laihua Dong, Qin Yan, Lianyi Zang, Yongping Xing, Zhenquan Wang, Qin Zhang, Kaitong Du, Huolin Shen, Junmin Zhang, Tao Zhou","doi":"10.3389/fpls.2025.1533151","DOIUrl":"10.3389/fpls.2025.1533151","url":null,"abstract":"<p><p>Pepper mild mottle virus (PMMoV), a member of the genus <i>Tobamovirus</i>, causes severe damage on pepper worldwide. Despite its impact, the pathogenicity mechanisms of PMMoV and the pepper plant's response to infection remain poorly understood. Here, we compared the transcriptomic changes in a susceptible pepper inbred line 21C241 with a resistant inbred line 21C385 seedlings, following systemic PMMoV infection using RNA sequencing. Our results revealed that PMMoV induced more pronounced mosaic symptoms and higher viral accumulation levels in the susceptible line 21C241 compared to the resistant line 21C385. We identified 462 and 401 differentially expressed genes (DEGs) in the systemically-infected leaves of the susceptible and resistant lines, respectively, when compared to their healthy counterparts. The majority of these DEGs were involved in photosynthesis and the biosynthesis of secondary metabolites, with 28 DEGs exhibiting distinct expression patterns between the two lines. Notably, the expression level of the <i>chlorophyll a-b binding protein 13</i> (<i>CAB13</i>) was significantly up-regulated in resistant line 21C385 following PMMoV infection. Functional analysis through silencing of <i>CAB13</i> in pepper and <i>Nicotiana benthamiana</i> demonstrated a reduction in PMMoV accumulation, suggesting that CAB13 plays a positive role in facilitating PMMoV infection in pepper plants. Taken together, our findings highlight the distinct gene expression profiles between susceptible and resistant pepper lines in response to PMMoV infection and confirm the proviral role of CAB13. This study provides valuable insights into the molecular mechanisms underlying resistance and susceptibility in pepper plants and may inform future strategies for disease management.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"16 ","pages":"1533151"},"PeriodicalIF":4.1,"publicationDate":"2025-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11808148/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143390335","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phytotoxicity and phytoremediation potential of Lemna minor exposed to perfluorooctanoic acid.
IF 4.1 2区 生物学
Frontiers in Plant Science Pub Date : 2025-01-27 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1493896
Azam Noori, Lorena Corbelli, Erin Lincoln, Sara Thomas, Jasmine Jones, Sara L Nason, Jason C White, Riley Lewis, Christy L Haynes
{"title":"Phytotoxicity and phytoremediation potential of <i>Lemna minor</i> exposed to perfluorooctanoic acid.","authors":"Azam Noori, Lorena Corbelli, Erin Lincoln, Sara Thomas, Jasmine Jones, Sara L Nason, Jason C White, Riley Lewis, Christy L Haynes","doi":"10.3389/fpls.2024.1493896","DOIUrl":"10.3389/fpls.2024.1493896","url":null,"abstract":"<p><p>Perfluorooctanoic acid (PFOA) is one of the highly toxic compounds which was phased out of application in consumer products in 2015 due to its harmful effects on human and environmental health. However, this chemical was in use for many years and is still found in water resources. This study focuses on the physiological response of duckweed (<i>Lemna mino</i>r) exposed to PFOA so as to determine phytotoxicity and the potential of this aquatic species to remove PFOA from the environment. A time-dependent phytotoxicity assay showed that exposure to 0.1 µg/L PFOA for 14 days resulted in the loss of chlorophyll pigment and 15-25% more chlorosis than in controls. Although exposure to PFOA for seven days resulted in chlorosis, no significant impact on physiological parameters such as photosynthetic pigment or anthocyanin content were detected. The analysis of cellular size on day zero and seven of the experiment showed that the control group showed significantly larger cell size after seven days (213 ± 6.5 µm²) compared with the day zero group (186 ± 18 µm²), while the size of the PFOA exposed group (198 ± 13 µm²) did not change significantly after seven days compared with the day zero group. The nuclear size increased significantly by 13% upon exposure to PFOA compared with the controls (ρ < 0.0001). The concentration of essential elements K, Cu, Fe, Mn, Zn, Mo were reduced in <i>L. minor</i> exposed to PFOA compared with the controls by 39.6, 33.4, 42.1, 35.2, 31.9, 40.2%, respectively. Additionally, PFOA accumulated in <i>L. minor</i> fronds and roots with an average bioaccumulation factor of 56 ± 7. Overall, while some symptoms of toxicity were observed, this study shows that <i>L. minor</i> can tolerate up to 0.1 µg/L PFOA, a commonly found concentrations in water bodies, and can remove PFOA from water. This study provides invaluable information regarding the phototoxicity impacts of PFOA on aquatic species and the potential for aquatic phytoremediation of PFOA.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"15 ","pages":"1493896"},"PeriodicalIF":4.1,"publicationDate":"2025-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11807973/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143390611","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Plastid genome comparison and phylogenetic analyses of the Chinese group of medicinal species and related taxa within Asparagus genus.
IF 4.1 2区 生物学
Frontiers in Plant Science Pub Date : 2025-01-27 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1508898
Pingxuan Xie, Tinglu Wang, Jiawei Tan, Linyuan Fan, Changkun Liu, Hanjing Yan
{"title":"Plastid genome comparison and phylogenetic analyses of the Chinese group of medicinal species and related taxa within <i>Asparagus</i> genus.","authors":"Pingxuan Xie, Tinglu Wang, Jiawei Tan, Linyuan Fan, Changkun Liu, Hanjing Yan","doi":"10.3389/fpls.2025.1508898","DOIUrl":"10.3389/fpls.2025.1508898","url":null,"abstract":"&lt;p&gt;&lt;strong&gt;Background: &lt;/strong&gt;&lt;i&gt;Asparagus&lt;/i&gt; L. is a large genus widely distributed across the continents of the Old World. Among its members, approximately 14 species found in China are recognized as popular herbal medicines. However, accurate authentication of these medicinal species and their phylogenetic relationships with related taxa remains unresolved.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Methods: &lt;/strong&gt;To identify simple sequence repeats (SSRs) and divergence hotspot regions appropriate for future authentication studies, as well as to infer the phylogenetic relationships among &lt;i&gt;Asparagus&lt;/i&gt; species, we employed a plastid genome (plastome) dataset consisting of 25 &lt;i&gt;Asparagus&lt;/i&gt; species (21 newly sequenced and four retrieved from GenBank), encompassing 12 Chinese medicinal species, for comparative and phylogenetic analyses.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Results: &lt;/strong&gt;All &lt;i&gt;Asparagus&lt;/i&gt; plastomes displayed a typical quadripartite structure with sizes ranging from 155,948 bp to 157,128 bp and harbored 114 unique genes (80 protein-coding genes, 30 tRNA genes, and four rRNA genes). IRscope and Mauve analyses indicated minimal structural variation among &lt;i&gt;Asparagus&lt;/i&gt; plastomes. We detected between 79 to 95 SSRs across the plastomes; most were located in the large single-copy (LSC) region and primarily consisted of mono-nucleotide repeat sequences (especially A and T repeats). The genus displayed mono-, di-, tri-, tetra-, penta-, and hexa-nucleotide repeats, but with variations in types and numbers among different species. Additionally, we identified 12 special SSR motifs and seven divergent hotspot regions that may serve as potential molecular markers for future identification efforts. Phylogenetic analyses yielded a robust phylogeny for &lt;i&gt;Asparagus&lt;/i&gt; taxa, which were split into Clades I, II, and III. Notably, medicinal &lt;i&gt;Asparagus&lt;/i&gt; species were mainly found in Clade III. Although the phylogenetic relationships of most &lt;i&gt;Asparagus&lt;/i&gt; species aligned with previous study findings, the phylogenetic positions of &lt;i&gt;A. munitus&lt;/i&gt;, &lt;i&gt;A. subscandens&lt;/i&gt;, &lt;i&gt;A. gobicus&lt;/i&gt;, and &lt;i&gt;A. dauricus&lt;/i&gt; were newly determined.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Conclusions: &lt;/strong&gt;The plastomes of &lt;i&gt;Asparagus&lt;/i&gt; are largely conserved in terms of genome structure, size, gene content, and arrangement. Nevertheless, SSRs analyses revealed significant interspecific polymorphism within &lt;i&gt;Asparagus&lt;/i&gt;. In addition, special SSR motifs and divergent hotspot regions identified from &lt;i&gt;Asparagus&lt;/i&gt; plastomes provided reference for subsequent identification investigations. The plastome-based phylogeny provided preliminary insights into the relationships among the Chinese group of medicinal species and related taxa within &lt;i&gt;Asparagus&lt;/i&gt;. Overall, this study offers a wealth of informative genetic resources pertinent to &lt;i&gt;Asparagus&lt;/i&gt;, thereby enhancing our understanding of its evolution and laying a foundation for species identification, assessment of genetic population diversity, as well ","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"16 ","pages":"1508898"},"PeriodicalIF":4.1,"publicationDate":"2025-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11808011/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143390357","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Domestication of medicinal plants (Lonicera japonica Thunb.) in China: comparison of morphological, resistance and biochemical traits between wild and cultivated populations.
IF 4.1 2区 生物学
Frontiers in Plant Science Pub Date : 2025-01-24 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1501396
Congzhe Hou, Luyao Huang, Zhuangzhuang Li, Nan Sun, Sheng Yang, Jia Li, Zhenhua Liu
{"title":"Domestication of medicinal plants (<i>Lonicera japonica</i> Thunb.) in China: comparison of morphological, resistance and biochemical traits between wild and cultivated populations.","authors":"Congzhe Hou, Luyao Huang, Zhuangzhuang Li, Nan Sun, Sheng Yang, Jia Li, Zhenhua Liu","doi":"10.3389/fpls.2024.1501396","DOIUrl":"10.3389/fpls.2024.1501396","url":null,"abstract":"<p><strong>Background: </strong>Most studies on domesticated plants have focused on those utilized for sustenance purposes. This study provides valuable insights into the domestication processes of honeysuckle (<i>Lonicera japonica</i> Thunb.), a semi-evergreen twining vine in the Caprifoliaceae family that is important in traditional Chinese medicine for its flower buds and potential as a dietary supplement. The definition of domestication syndrome for honeysuckle remains unclear due to its perennial and asexual reproduction mode, resulting in a lack of information on domestication-related traits. Therefore, this study aims to compare and analyze differences in morphology, resistance, and biochemical composition between wild and cultivated varieties.</p><p><strong>Methods: </strong>A total of 36 wild and 81 cultivated specimens were examined to compare plant morphology, flowering time, bud length, active ingredients, and resistance between wild and cultivated populations.</p><p><strong>Results: </strong>The cultivated honeysuckle exhibited several noteworthy characteristics, including more erect plant morphology, higher flower-to-leaf ratio, more obvious aggregation of flowers into clusters at the top of branches, higher frequency of flowering, and longer bud length compared to the wild type. Additionally, the cultivated specimen demonstrated significantly elevated levels of chlorogenic acid as a biochemical constituent. However, in terms of resistance against powdery mildew, wild individuals displayed evident advantages over their cultivated counterparts.</p><p><strong>Conclusion: </strong>The observed phenotypic variation within the honeysuckle field provides empirical support for the hypothesis that farmer management practices influence domestication syndrome, as indicated by the deliberate enhancement of specific desirable traits during species domestication.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"15 ","pages":"1501396"},"PeriodicalIF":4.1,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11802492/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143382202","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comprehensive review of mapping climate change impacts on tea cultivation: bibliometric and content analysis of trends, influences, adaptation strategies, and future directions.
IF 4.1 2区 生物学
Frontiers in Plant Science Pub Date : 2025-01-24 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1542793
Altyeb Ali Abaker Omer, Chun-Hua Zhang, Jie Liu, Zhi-Guo Shan
{"title":"Comprehensive review of mapping climate change impacts on tea cultivation: bibliometric and content analysis of trends, influences, adaptation strategies, and future directions.","authors":"Altyeb Ali Abaker Omer, Chun-Hua Zhang, Jie Liu, Zhi-Guo Shan","doi":"10.3389/fpls.2024.1542793","DOIUrl":"10.3389/fpls.2024.1542793","url":null,"abstract":"<p><p>Climate change has a profound impact on <i>tea cultivation</i>, posing significant challenges to yield, quality, and sustainability due to stressors such as drought, temperature fluctuations, and elevated CO₂ levels. This study aims to address these challenges by identifying and synthesizing key themes, influential contributions, and effective adaptation strategies for mitigating the impacts of <i>climate change</i> on <i>tea production</i>. A systematic bibliometric and content analysis was conducted on 328 peer-reviewed documents (2004-2023), following the <i>PRISMA</i> methodology. Performance analysis using <i>Bibliometrix</i> examined trends in publication output, leading contributors, and geographical distribution, while science mapping with <i>VOSviewer</i> revealed collaboration networks and thematic clusters. A detailed review of highly cited studies highlighted the primary climate variables affecting tea cultivation and identified innovative adaptation strategies, as well as critical knowledge gaps. The results show significant progress in understanding the physiological, biochemical, and molecular responses of tea plants to climate-induced stressors, including antioxidant mechanisms, secondary metabolite regulation, and genomic adaptations. Despite these advancements, challenges remain, particularly regarding the combined effects of multiple stressors, long-term adaptation strategies, and the socioeconomic implications of <i>climate change</i>. The findings underscore the need for interdisciplinary approaches that integrate molecular, ecological, and socioeconomic research to address these issues. This study provides a solid foundation for guiding future research, fostering innovative adaptation strategies, and informing policy interventions to ensure sustainable tea production in a <i>changing climate</i>.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"15 ","pages":"1542793"},"PeriodicalIF":4.1,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11802803/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143382201","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identifcation and fine mapping of qHSW1, a major QTL for hundred-seed weight in mungbean.
IF 4.1 2区 生物学
Frontiers in Plant Science Pub Date : 2025-01-24 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1510487
Xuesong Han, Long Zhao, Juan Yu, Xingmin Wang, Shilong Zhang, Li Li, Changyan Liu
{"title":"Identifcation and fine mapping of <i>qHSW1</i>, a major QTL for hundred-seed weight in mungbean.","authors":"Xuesong Han, Long Zhao, Juan Yu, Xingmin Wang, Shilong Zhang, Li Li, Changyan Liu","doi":"10.3389/fpls.2024.1510487","DOIUrl":"10.3389/fpls.2024.1510487","url":null,"abstract":"<p><p>Mung bean, an important economic crop, is considered a crop with relatively high levels of plant protein constituents and is consumed as both a vegetable and a grain. Among various yield-related traits, hundred-seed weight (HSW) is crucial in determining mung bean production. This study employed a recombinant inbred line (RIL) population of 200 lines that were genotyped via whole-genome resequencing to exploit genetic potential in the identification of HSW-associated quantitative trait loci (QTLs) across four environments. We identified 5 QTLs for HSW, each explaining 2.46-26.15% of the phenotypic variance. Among these, <i>qHSW1</i> was mapped on chromosome 1 in all four environments, explaining 16.65-26.15% of the phenotypic variation. Fine mapping and map-based cloning procedures, along with progeny testing of recombinants, aided in narrowing the candidate interval for <i>qHSW1</i> to 506 kb. This identification of the <i>qHSW1</i> genomic interval and closely linked markers to <i>qHSW1</i> could prove valuable in breeding efforts for improved mung bean cultivars with higher seed weight.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"15 ","pages":"1510487"},"PeriodicalIF":4.1,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11802520/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143382205","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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