ChimiaPub Date : 2026-03-25DOI: 10.2533/chimia.2026.138
Joanna Bonnici, Christopher J Schofield, Akane Kawamura
{"title":"JmjC Histone Demethylases: Beyond Histone Lysine Demethylation.","authors":"Joanna Bonnici, Christopher J Schofield, Akane Kawamura","doi":"10.2533/chimia.2026.138","DOIUrl":"10.2533/chimia.2026.138","url":null,"abstract":"<p><p>Jumonji C histone lysine demethylases (JmjC-KDMs) are key chromatin regulators best known for catalysing histone lysine demethylation. There is growing evidence that JmjC-KDMs have a broader catalytic scope. This review summarises recent advances on JmjC-KDM activities beyond histone lysine demethylation, including arginine demethylation and arginine hydroxylation. We discuss how emerging insights into sequence-reactivity and inter-domain relationships, combinatorial post-translational modifications (PTMs), and cellular context shape substrate selectivity and enzymatic outcomes. These findings highlight substantial mechanistic flexibility within the JmjC-KDM family and may help prompt reconsideration of how their biochemistry is connected to physiological roles. We discuss implications for JmjC-KDM inhibitor development and outline outstanding questions, guiding future research concerning their roles in epigenetic regulation.</p>","PeriodicalId":9957,"journal":{"name":"Chimia","volume":"80 3","pages":"138-144"},"PeriodicalIF":1.4,"publicationDate":"2026-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147572726","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
ChimiaPub Date : 2026-03-25DOI: 10.2533/chimia.2026.120
Aaron M Fleming, Cynthia J Burrows
{"title":"Nanopore Studies of DNA Damage and G-quadruplex Folding in the Human Telomere Sequence.","authors":"Aaron M Fleming, Cynthia J Burrows","doi":"10.2533/chimia.2026.120","DOIUrl":"10.2533/chimia.2026.120","url":null,"abstract":"<p><p>The bacterial pore-forming toxin α-hemolysin has dimensions appropriate for capture and translocation of DNA strands in a single-molecule electrophoresis experiment. We used the nanopore's properties to study G-quadruplex unfolding in the human telomere repeat sequence with and without the presence of DNA lesions introduced into either the GGG tracks of a potential G-quadruplex (via oxidation) or the TTA loops (via photodimerization). Different topological folds of the G-quadruplex could be distinguished by either their current-time signatures or by their unfolding rates when a dA25 tail was added. Another more compact four-stranded structure, the i-motif, was also studied and found to be exceptionally well folded and stable inside the nanopore cavity. Comparisons are made between early studies with a home-built nanopore device vs. the currently available instrument from Oxford Nanopore Technologies (ONT), showing that we approach, but do not yet achieve, single-molecule sequencing of DNA damage sites in human telomere repeats. These studies aid in our understanding of the structure and dynamics of non-canonically folded DNA, its behaviour in crowded environments that mimic intracellular conditions, and the ability to use nanopore sequencing to identify DNA damage sites in this oxidation-prone segment of the genome.</p>","PeriodicalId":9957,"journal":{"name":"Chimia","volume":"80 3","pages":"120-124"},"PeriodicalIF":1.4,"publicationDate":"2026-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13334806/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147572698","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
ChimiaPub Date : 2026-02-25DOI: 10.2533/chimia.2026.51
Norbert Heeb, Joachim Mohn, Adrian Wichser, Markus Zennegg, Kerstin Zeyer
{"title":"Chemistry of Combustion-generated Nanoparticles and their Transformation in Particle Filters.","authors":"Norbert Heeb, Joachim Mohn, Adrian Wichser, Markus Zennegg, Kerstin Zeyer","doi":"10.2533/chimia.2026.51","DOIUrl":"10.2533/chimia.2026.51","url":null,"abstract":"<p><p>Combustion-generated nanoparticles with diameters of 10-200 nm are ideal shuttles to transport compounds into the human body. The so-called Trojan Horse effect describes the translocation of persistent nanoparticles covered with adsorbates across the alveolar membrane of the lung to the blood circulation system and further to other organs. The toxicology of such nanoparticles is determined by the chemical nature of their adsorbates. We determined the genotoxic potential of such nanoparticles and quantified levels of carcinogens and mutagens like polycyclic aromatic hydrocarbons (PAHs), nitro-PAHs, polychlorinated dibenzodioxins (PCDDs) and furans (PCDFs) in diesel, gasoline and jet engine exhausts. We studied the impact of catalytic particle filters on these compounds which can bind to the aryl-hydrocarbon receptor (AhR), an important domain of a human transcription factor reaching the cell nucleus, where it interferes with gene transcription and regulation.</p>","PeriodicalId":9957,"journal":{"name":"Chimia","volume":"80 1-2","pages":"51-56"},"PeriodicalIF":1.4,"publicationDate":"2026-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147324679","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
ChimiaPub Date : 2026-02-25DOI: 10.2533/chimia.2026.64
Marloes Eeftens, Eric P Twomey, Fiona Streit, Martin Röösli
{"title":"Airborne Ultrafine Particles: Real-life Exposure Patterns, Epidemiological Evidence and Regulatory Responses in Switzerland and Beyond.","authors":"Marloes Eeftens, Eric P Twomey, Fiona Streit, Martin Röösli","doi":"10.2533/chimia.2026.64","DOIUrl":"10.2533/chimia.2026.64","url":null,"abstract":"<p><p>Ultrafine particles (UFP) exhibit large spatial and temporal contrasts, and distinct physicochemical properties that enable deep lung penetration and systemic translocation, posing potential health risks. Despite mechanistic evidence from toxicological studies, large-scale epidemiological evidence remains limited due to sparse monitoring and complex exposure assessment. Switzerland has contributed substantially to UFP research through measurement campaigns, mobile monitoring, and modelling studies, which improved understanding of spatial and temporal exposure contrasts. Emerging findings suggest associations between long-term UFP exposure and cardiovascular indicators, though epidemiological evidence for short-term associations with mortality and morbidity remains weak. Ongoing Swiss and European projects aim to refine high-resolution spatiotemporal models, assess population-level health impacts, and inform future air quality standards and regulatory frameworks for UFPs.</p>","PeriodicalId":9957,"journal":{"name":"Chimia","volume":"80 1-2","pages":"64-70"},"PeriodicalIF":1.4,"publicationDate":"2026-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147324740","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
ChimiaPub Date : 2026-02-25DOI: 10.2533/chimia.2026.21
Alejandro Keller, Heinz Burtscher, Ernest Weingartner
{"title":"Swiss Made Measurement Techniques for Carbonaceous Aerosols.","authors":"Alejandro Keller, Heinz Burtscher, Ernest Weingartner","doi":"10.2533/chimia.2026.21","DOIUrl":"https://doi.org/10.2533/chimia.2026.21","url":null,"abstract":"<p><p>Carbonaceous aerosols (CA) represent a chemically and physically diverse class of airborne particles. Their relevance for climate and health is significant, but poorly understood. Conventional metrics, such as particulate matter (PM10 or PM2.5), are insufficient to capture their impact. More specific indicators, such as elemental and organic carbon (EC and OC) and equivalent black carbon (eBC), often suffer from methodological artefacts, limited compatibility, and insufficient time resolution. In this work, we present an overview of the techniques and measurement systems developed by members of our group at FHNW for improved in situ quantification and characterization of CA. Photoemission-based sensors provide a real-time signal that serves as a proxy for particle-bound polycyclic aromatic hydrocarbons (PAHs), which include well known carcinogenic substances. Photothermal methods, such as photothermal interferometry (PTI) and photoacoustic spectroscopy (PAS), are used for direct observation of light absorption - an optical property directly linked to climate effects - without artefacts inherent to filter-based measurements. The fast thermal carbon totalizator (FATCAT) provides robust, unattended measurement of total carbon with high time resolution and generates fast-thermograms that reveal volatility and refractivity. Collectively, these methods address key limitations of current CA monitoring and support the long-term goal of integrating relevant metrics into air quality monitoring and climate observation networks.</p>","PeriodicalId":9957,"journal":{"name":"Chimia","volume":"80 1-2","pages":"21-28"},"PeriodicalIF":1.6,"publicationDate":"2026-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147324850","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
ChimiaPub Date : 2026-02-25DOI: 10.2533/chimia.2026.36
Jacinta Edebeli, Lukas Durdina, Benjamin T Brem, Theo Rindlisbacher
{"title":"Aviation Particulate Matter Emissions Research in Switzerland: History and Milestones to Date.","authors":"Jacinta Edebeli, Lukas Durdina, Benjamin T Brem, Theo Rindlisbacher","doi":"10.2533/chimia.2026.36","DOIUrl":"https://doi.org/10.2533/chimia.2026.36","url":null,"abstract":"<p><p>Aviation emissions have been the focus of research and regulation since the 1970s. Switzerland's Federal Office of Civil Aviation (FOCA) and research groups in Switzerland have contributed significantly to an improved understanding of these emissions and their impact on the environment and health. This paper presents a brief history of aviation emissions research in Switzerland. We also present the direction of future research on aviation emissions using the Swiss mobile aircraft emissions measurement system (SMARTEMIS).</p>","PeriodicalId":9957,"journal":{"name":"Chimia","volume":"80 1-2","pages":"36-40"},"PeriodicalIF":1.6,"publicationDate":"2026-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147324761","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
ChimiaPub Date : 2026-02-25DOI: 10.2533/chimia.2026.41
Andreas Mayer, Max Wyser, Jan Czerwinski, Thomas Lutz, Friedrich Legerer, François Jaussi, Norbert Heeb
{"title":"Retrospective on the Introduction of Particle Filters to Eliminate Emissions of Nanoparticles from Engine Exhaust Gas.","authors":"Andreas Mayer, Max Wyser, Jan Czerwinski, Thomas Lutz, Friedrich Legerer, François Jaussi, Norbert Heeb","doi":"10.2533/chimia.2026.41","DOIUrl":"https://doi.org/10.2533/chimia.2026.41","url":null,"abstract":"<p><p>The particle filter for most diesels and some petrol categories is now state of the art. The worldwide population is estimated to be >250 million vehicles with filters. The nanoparticle concentration in ambient air is thus reduced in Switzerland to one third of the status of 2005 and worldwide premature deaths by traffic related ambient air is reduced by >2 million cases annually. This success story started in 1995 when SUVA, the Swiss occupation health authority, had to guarantee safety and health in the world's largest railway transalpine tunnelling system, NEAT, scheduled to be built from the year 2000. The solution was VERT certified diesel particle filters (DPFs) on all engines without any exceptions. Transfer to other applications and other countries, however, had to overcome serious resistance of industry and politics which delayed the process remarkably until filters became mandatory by the EU-legislation 2011. The decisive element was the introduction of the particle number (PN) limit for solid particles of sizes 10-500 nm in place of particulate matter (PM) mass in 1995. Many vehicles are still waiting for filters worldwide and the effect of this highly effective and cost-efficient tool on health and global warming could be more than tripled.</p>","PeriodicalId":9957,"journal":{"name":"Chimia","volume":"80 1-2","pages":"41-50"},"PeriodicalIF":1.6,"publicationDate":"2026-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147324779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
ChimiaPub Date : 2026-02-25DOI: 10.2533/chimia.2026.8
Heinz Burtscher
{"title":"Introduction in Nanoparticle Physics with a Focus on Combustion-derived Particles.","authors":"Heinz Burtscher","doi":"10.2533/chimia.2026.8","DOIUrl":"https://doi.org/10.2533/chimia.2026.8","url":null,"abstract":"<p><p>A brief introduction to the behaviour of particles in gas suspension (aerosols) will be given. In particular the influence of the particle size on the interaction of the particle with the surrounding gas, which determines the motion of the particle as diffusion, sedimentation or motion of charged particles in an electrical field, is discussed. From this interaction, definitions for equivalent diameters for nonspherical particles (mobility- and aerodynamic diameters) are derived as well as definitions for the surface. The influence of coagulation on the number concentration as a function of time is shown. Furthermore, formation and properties of combustion particles are briefly discussed. Reasons leading to particle emission are given and differences between particles from different sources are discussed.</p>","PeriodicalId":9957,"journal":{"name":"Chimia","volume":"80 1-2","pages":"8-12"},"PeriodicalIF":1.6,"publicationDate":"2026-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147324855","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}