{"title":"Improving Pharmaceutical Properties of Thiabendazole through Cocrystallization with Structurally Similar Polyphenol Ligands.","authors":"Yue Chen, Shuyu Liu","doi":"10.1248/cpb.c25-00601","DOIUrl":"10.1248/cpb.c25-00601","url":null,"abstract":"<p><p>In this study, two novel thiabendazole (TBZ) cocrystals were successfully prepared by the solvent evaporation method through the selection of structurally similar, highly water-soluble resorcinol (RES) and phloroglucinol (PHG) as cocrystal formers (CCFs), together with TBZ, which is inherently water-insoluble. The two TBZ cocrystals were comprehensively characterized by single-crystal X-ray diffraction (SCXRD), powder X-ray diffraction (PXRD), thermogravimetric-differential scanning calorimetry (TG-DSC), and Fourier-transform IR spectroscopy (FT-IR). Hirshfeld surface analysis was employed to visually illustrate the types and distributions of intermolecular interactions in the two TBZ cocrystals. The solubility and dissolution of the two TBZ cocrystals were measured, respectively. Both cocrystals exhibited superior aqueous solubility compared with TBZ. Specifically, the thiabendazole-phloroglucinol (TBZ-PHG) cocrystal demonstrates that the increased density of hydroxyl groups in the coformer enhances the hydrogen bonding interactions, leading to the formation of a 2 : 1 (TBZ:PHG) stoichiometric cocrystal. The non-parallel arrangement of TBZ molecules in the cocrystal disrupts the close π-π stacking, thereby enhancing solvent penetration. Consequently, its aqueous solubility is improved to a greater extent.</p>","PeriodicalId":9773,"journal":{"name":"Chemical & pharmaceutical bulletin","volume":"74 1","pages":"71-78"},"PeriodicalIF":1.5,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145984437","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Photoaffinity Electrophoretic Mobility Shift Assay for Analyzing the Binding Specificity of DNA Aptamers to α-Thrombin.","authors":"Yutaka Sadakane, Akari Tsubokura, Mitsuki Kasai, Yuka Ito, Chihiro Hirai","doi":"10.1248/cpb.c25-00751","DOIUrl":"https://doi.org/10.1248/cpb.c25-00751","url":null,"abstract":"<p><p>DNA aptamers are attractive alternatives to antibodies and advances in selection technologies have yielded several candidate sequences, creating a strong need for efficient methods to evaluate their binding specificity. We previously established a photoaffinity electrophoretic mobility shift assay (EMSA) for analyzing DNA-protein interactions. In this study, we investigated whether this method can be applied to assess the binding specificities of α-thrombin-binding DNA aptamers. The binding specificities of a 15-mer and a 29-mer aptamer were evaluated via photoaffinity EMSA using reaction mixtures enriched in zymogen prethrombin-2, whose structure closely resembles α-thrombin but lacks fibrinogen-clotting activity. Photoaffinity EMSA enabled quantification of the relative binding strengths of α-thrombin and prethrombin-2 resolved in the same sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis (PAGE) lane, revealing that the specificity for α-thrombin was approximately 2.5-3.5-fold higher than that for prethrombin-2 for both aptamers. In the case of the 15-mer aptamer, introducing the photoreactive group at the 9th nucleotide reduced its binding specificity for α-thrombin. This finding indicates that the position of the modification affects aptamer-protein recognition and offers clues about the structural basis of binding. Photoaffinity EMSA also enabled us to distinguish the binding sites of the 15-mer and 29-mer aptamers on α-thrombin using competition experiments with dabigatran and heparin, while allowing selective detection of α-thrombin in human plasma. Together, these results demonstrate that photoaffinity EMSA is a simple and informative approach that can evaluate the binding specificities of multiple DNA aptamers for a target protein in a single SDS-PAGE-based assay.</p>","PeriodicalId":9773,"journal":{"name":"Chemical & pharmaceutical bulletin","volume":"74 8","pages":"615-623"},"PeriodicalIF":1.5,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148663396","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Granulated Ammonium Alginate as a Functional Sodium-Sequestration Agent: Formulation Optimization Using Box-Behnken Design.","authors":"Gosuke Shimada, Yuto Higa, Kazuki Shimogoryou, Maria Yamaguchi, Toru Taharabaru, Yuya Hayashi, Hidenori Takeshita, Taishi Higashi, Keiichi Motoyama","doi":"10.1248/cpb.c26-00322","DOIUrl":"https://doi.org/10.1248/cpb.c26-00322","url":null,"abstract":"<p><p>Excessive salt intake is a major risk factor for cardiovascular, cerebrovascular, and renal diseases, highlighting the need for strategies to reduce intestinal sodium absorption. Ammonium alginate (AAL) suppresses the postprandial increase in blood sodium levels and promotes fecal sodium excretion via ion-exchange and gel-mediated sodium entrapment in the gastrointestinal tract. However, its unpleasant odor and taste, along with its high viscosity upon contact with saliva, cause oral discomfort and limit its practical use in food and clinical settings. In this study, AAL granules were developed to improve their handling and sensory properties while preserving their sodium-sequestration functionality. Granulation with the AQshelax coating was performed using a fluidized-bed granulator, and the process parameters were optimized using a Box-Behnken experimental design. The optimized granules exhibited improved flowability and markedly reduced viscosity upon contact with saliva, resulting in enhanced sensory evaluation scores. In vitro sodium-binding assays demonstrated that the optimized granules retained a sodium-binding capacity comparable to that of unprocessed AAL powder. Furthermore, in salt-loaded mice, granulated AAL maintained its ability to suppress elevated blood sodium levels in vivo. These findings indicate that design-of-experiments-guided granulation successfully overcame key formulation limitations without compromising sodium-sequestration functionality, thereby enabling the practical dietary and clinical application of AAL as a sodium-excreting agent.</p>","PeriodicalId":9773,"journal":{"name":"Chemical & pharmaceutical bulletin","volume":"74 9","pages":"708-714"},"PeriodicalIF":1.5,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148982353","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Development of Frontier Artificial Nucleoside Derivatives through Precise Nucleic Acid Recognition for Drug Discovery.","authors":"Yosuke Taniguchi","doi":"10.1248/cpb.c25-00635","DOIUrl":"10.1248/cpb.c25-00635","url":null,"abstract":"<p><p>Artificial nucleic acids-engineered through fine-tuned molecular design based on organic synthetic chemistry and focused on nucleic acid molecular recognition-show significant potential in drug discovery, especially in the development of nucleic acid therapeutics and drugs. This review underscores recent advancements in nucleic acid chemistry achieved by our research group, including the design of novel artificial nucleoside analogs, exploration of their applications, and elucidation of their molecular functions.</p>","PeriodicalId":9773,"journal":{"name":"Chemical & pharmaceutical bulletin","volume":"74 3","pages":"196-201"},"PeriodicalIF":1.5,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147324891","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Characterization of Mechanochemical Solid-State Polymerization for Development of Sulfobetaine Polymer-Drug Conjugates: Design and Synthesis of Artemisinin-Conjugated Novel Methacrylamide Derivatives.","authors":"Naoki Doi, Yukinori Yamauchi, Yasushi Sasai, Ryosuke Nagai, Madoka Ikawa, Masayuki Kuzuya, Shin-Ichi Kondo","doi":"10.1248/cpb.c26-00031","DOIUrl":"10.1248/cpb.c26-00031","url":null,"abstract":"<p><p>Artemisinin derivatives (ARTs) induce ferrous iron-dependent cell death (ferroptosis) by generating free radicals. Polymer-ARTs conjugates would be advantageous for cancer therapy. In this paper, we designed and synthesized the three types of ART-conjugated novel methacrylamide derivatives with or without a spacer between the aromatic group and the methacrylamide moiety for mechanochemical solid-state polymerization. The polymer conversion rate of ART-ethyl-MA and ART-methyl-MA for 90 min polymerization was achieved at 78 and 49%, respectively. However, ART-MA, which does not have a spacer, could not polymerize owing to the lowest unoccupied molecular orbital (LUMO) expanding from the methacrylamide moiety to the aromatic sites. The resulting poly(ART-ethyl-MA) produced the thermodynamically stable end-chain radicals through the main-chain scission via mechanical energy, and the generated mechanoradicals would play a role as an initiator of the surrounding monomers. The biocompatible sulfobetaine polymer-ARTs conjugates were fabricated through the mechanochemical solid-state copolymerization of sulfobetaine methacrylate (SBMA) and ART-ethyl-MA. The number average molecular weight and heterogeneity of the resulting water-soluble PSBMA-ARTs conjugates were 8000 g mol<sup>-1</sup> and 1.10, respectively. These results suggest that the design of solid monomers suitable for mechanochemical solid-state polymerization would require a molecular structure susceptible to single solid-state electron transfer (SSET) and the stability of mechanoradicals generated by the main-chain scission of resulting polymer. The mechanochemical solid-state copolymerization of zwitterionic monomer and hydrophobic monomer would be advantageous for the development of biocompatible polymer-drug conjugates.</p>","PeriodicalId":9773,"journal":{"name":"Chemical & pharmaceutical bulletin","volume":"74 3","pages":"260-268"},"PeriodicalIF":1.5,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147509934","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Direct Arylation of Juglone Enables Divergent Access to WS-5995 Analogs.","authors":"Yusuke Akagi, Yoshimi Shimizu, Erika Iwasaki, Yuichiro Taira, Toshiya Komatsu","doi":"10.1248/cpb.c26-00475","DOIUrl":"https://doi.org/10.1248/cpb.c26-00475","url":null,"abstract":"<p><p>The direct arylation of juglone enables concise access to WS-5995A and the related natural product WS-5995C, providing an entry to the WS-5995 family. The method affords access to lactam analogs via either C-2 or C-3 arylation, enabling the variation of the phenolic hydroxyl position. Cytotoxicity studies reveal a pronounced effect of the phenolic hydroxyl group positioning on biological activity, with the C-3-derived lactam showing enhanced potency. Further demethylation of WS-5995A increases activity, suggesting an important role of a free phenolic hydroxyl group.</p>","PeriodicalId":9773,"journal":{"name":"Chemical & pharmaceutical bulletin","volume":"74 10","pages":"815-818"},"PeriodicalIF":1.5,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149285388","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Structure-Guided Engineering of 2-Oxoglutarate-Dependent Oxygenases: Principles, Case Studies, and Emerging Opportunities.","authors":"Yu Nakashima","doi":"10.1248/cpb.c25-00652","DOIUrl":"https://doi.org/10.1248/cpb.c25-00652","url":null,"abstract":"<p><p>2-Oxoglutarate-dependent non-heme iron oxygenases (2OGX) catalyze a broad spectrum of oxidative transformations, including hydroxylation, halogenation, desaturation, cyclization, rearrangement, and endoperoxidation, through a conserved HxD/E…H facial triad and Fe(IV)=O chemistry. Their functional diversity arises from structural elements that define the catalytic pocket. Substrate-binding architectures can be categorized into four recurrent motifs-the conserved lip (CLip), conserved lid (CLid), specific lid (SL), and dimer lid (DL)-together with the major β-sheet framework (βI-βVI); mutations in these lid/lip elements and within β-strands collectively govern substrate entry, positioning, and radical partitioning. This review discusses representative case studies organized by reaction class-hydroxylation/halogenation, cyclization/rearrangement, endoperoxidation, and free amino acid oxidation-to illustrate how targeted substitutions in these motifs enable rational reprogramming of reactivity. Examples include hydroxylases converted to halogenases, fungal enzymes redirected to construct alternative meroterpenoid scaffolds, endoperoxidases generating non-natural products, and amino acid hydroxylases engineered for halogenation, desaturation, or aziridination. These studies highlight the structural plasticity of 2OGX scaffolds and establish them as programmable biocatalysts, with advances in structural biology and computational design expected to accelerate their application in synthetic biology, natural product discovery, and drug development. The literature published from 2015 through September 2025 is reviewed.</p>","PeriodicalId":9773,"journal":{"name":"Chemical & pharmaceutical bulletin","volume":"74 1","pages":"1-15"},"PeriodicalIF":1.3,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145899257","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Asymmetric Aerobic Intramolecular Dearomative ortho Coupling of Tethered Phenols by Chromium-Salen Complex/Nitroxyl Radical Catalysis.","authors":"Shota Nagasawa, Nao Yokota, Shogo Fujiki, Yusuke Sasano, Yoshiharu Iwabuchi","doi":"10.1248/cpb.c25-00762","DOIUrl":"10.1248/cpb.c25-00762","url":null,"abstract":"<p><p>Herein, we report the catalytic asymmetric intramolecular dearomative coupling of tethered phenols in ortho-para fashion under aerobic conditions. Cooperative catalysis with a chromium-salen complex/nitroxyl radical enabled the desired transformation to proceed at ambient temperature under oxygen atmosphere. A range of tethered phenols were efficiently converted into spirocyclic 2,4-dienones in moderate to good yields and enantioselectivities (up to 68% enantiomeric excess (ee)).</p>","PeriodicalId":9773,"journal":{"name":"Chemical & pharmaceutical bulletin","volume":"74 1","pages":"127-131"},"PeriodicalIF":1.5,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100083","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Synthesis of Multisubstituted Heterocyclic and Aromatic Compounds Using Catalyst-Controlled Site-Selective Reactions.","authors":"Miyuki Yamaguchi","doi":"10.1248/cpb.c25-00640","DOIUrl":"10.1248/cpb.c25-00640","url":null,"abstract":"<p><p>Site-selective reactions are important tools in the synthesis of useful multisubstituted compounds, including pharmaceuticals and functional molecules. Such reactions convert functional groups in a selective manner, thereby enabling the synthesis of various compounds with different substitution patterns from a single starting compound. Although a number of transition metal-catalyzed site-selective reactions have been developed, site-selectivity is usually controlled by the substrate, limiting the scope of the reaction. In contrast, catalyst-controlled site-selective reactions of single substrates have been reported, wherein ligand-controlled reactions are of particular interest. Previously, our group developed hydroxyterphenylphosphine ligands to achieve the palladium-catalyzed ortho-selective cross-coupling reactions of dihalogenated phenols/anilines. In this system, the hydroxy groups of the ligand bind to the substrate via the metal, and the proximity of palladium to the halogen at the ortho-position accelerates the reaction at this less reactive position. These reactions have been employed to synthesize multisubstituted benzofurans and indoles from dichlorophenols/anilines using a one-pot ortho-selective Sonogashira coupling/cyclization/Suzuki-Miyaura coupling protocol. The developed catalyst also has enabled the direct C3-selective arylation of N-nonsubstituted indoles, and both tricyclic pyrroloindolines and pyridoindolines have been obtained from tryptamine derivatives via a C3-dearomative arylation/cyclization strategy. Furthermore, the site-selective arylation of N-nonsubstituted 1H-pyrroles has been achieved by changing the ligand, and the reaction proceeded selectively at the C2 or C3 position, yielding 2,2,5-trisubstituted 2H-pyrroles and other compounds whose preparation is challenging via conventional approaches. Finally, the regioselective synthesis of polycyclic aromatic compounds using appropriate palladium catalysts has been performed using the site-selective approach.</p>","PeriodicalId":9773,"journal":{"name":"Chemical & pharmaceutical bulletin","volume":"74 2","pages":"132-144"},"PeriodicalIF":1.5,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100055","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}