{"title":"Genetic parameter estimation for traits related to the immune system against sheep red blood cells in Japanese quail.","authors":"Batol Asghari, Saeed Zerehdaran, Zahra Kheirkhah","doi":"10.1080/00071668.2024.2428302","DOIUrl":"https://doi.org/10.1080/00071668.2024.2428302","url":null,"abstract":"<p><p>1. Improving resistance against disease is important in the animal and poultry industry. Besides drugs and vaccines, genetic selection for improved immune systems may be an effective approach.2. Traits related to the immune system were studied in a 938 pedigreed Japanese quail population infected by sheep red blood cells (SRBC). Besides body weight at 35 d of age (BW35), weight of the gizzard (G), liver (Li), lungs (Lu), bursa (Bu), spleen (S), heart (H), and digestive track (D) and length of ileum (I) and caecum (C) were recorded. Total antibody (TA), mercaptoethanol-resistant (IgG), mercaptoethanol-sensitive titres (IgM), the number of monocyte (M), basophil (B) and eosinophil (E) and the ratio of heterophil to lymphocyte (H/L) were measured. Co-variance components were estimated <i>via</i> Gibbs sampling using GIBBS3F90 software. Five univariate animal models, including simple forms, were used for genetic parameter estimations, and the best model was determined by the deviance information criterion (DIC). Genetic and environmental correlations were estimated using a bivariate animal model.3. Direct heritability estimates for internal organs ranged from 0.06 (Lu) to 0.57 (G) and for immune system traits from 0.05 (IgM) to 0.17 (IgG). Negative genetic correlations were found between BW35 and internal organs (-0.22 to -0.80).4. Including one of the internal organs, such as the spleen, in the selection index improved the immune response in heavier birds. Additionally, because of the moderate heritability of IgG (0.17) and its effect on lasting immunity, selecting for higher IgG concentration may improve the resistance of Japanese quail against pathogens.</p>","PeriodicalId":9322,"journal":{"name":"British Poultry Science","volume":" ","pages":"1-8"},"PeriodicalIF":1.6,"publicationDate":"2024-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142675232","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
T Kettrukat, J S Petersen, E Grochowska, M Therkildsen
{"title":"Effects of the early incubation temperature on the muscle physiology, meat quality, bone strength and gait score in Ross broilers.","authors":"T Kettrukat, J S Petersen, E Grochowska, M Therkildsen","doi":"10.1080/00071668.2024.2419614","DOIUrl":"10.1080/00071668.2024.2419614","url":null,"abstract":"<p><p>1. Modern broiler chickens are among the most efficient livestock in terms of resource requirements and production time. To maintain and improve production efficiency and meat quality and account for welfare problems, early interventions, such as incubation temperature, require investigation2. In this study, Ross 308 broiler eggs were incubated at either 36.5°C or 38.5°C on embryonic days (ED) 4-7. The control group eggs were incubated at a constant temperature of 37.5°C. <i>Musculus pectoralis</i> and <i>musculus gastrocnemius</i> samples were taken for the investigation of muscle physiology, and the tibia was sampled for bone strength analysis from chickens aged 35 and 36 d. In addition, meat quality was analysed and gait scoring was performed.3. The performance of chickens in the 36.5°C group was inferior to those in the other groups up to d 10 post-hatch, but compensatory growth was seen by d 35 of age. Meat quality was unaffected, but significant differences between sexes were observed. Males had lighter meat colour than females. Muscle glycogen and intramuscular fat were unaffected by the incubation temperature, but the <i>muscularis pectoralis</i> and <i>gastrocnemius</i> intramuscular fat contents were greater in males than in females, accompanied by the increased expression of enzymes involved in lipolysis. In the 38.5°C group, males had less bone elasticity than females, and the inverse was observed in the other groups. Gait scores were affected by sex but not incubation temperature.4. The results of this study showed a stronger effect of sex than incubation temperature on broiler muscle physiology, bone strength, performance and meat quality.</p>","PeriodicalId":9322,"journal":{"name":"British Poultry Science","volume":" ","pages":"1-12"},"PeriodicalIF":1.6,"publicationDate":"2024-11-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142646592","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Effect of laying parity and sex ratio on reproduction performance and biochemical parameters of White Roman geese kept in an environmentally controlled house.","authors":"M J Lin, S C Chang, L J Lin, S Y Peng, T T Lee","doi":"10.1080/00071668.2024.2403490","DOIUrl":"https://doi.org/10.1080/00071668.2024.2403490","url":null,"abstract":"<p><p>1. This study aimed to investigate the effect of the first and third parities and one male: four females (1 M:4F) and 1 M:6F sex ratios of White Roman geese on their reproductive performance and biochemical parameters in an environmentally controlled house.2. Ganders (<i>n</i> = 136) and geese (<i>n</i> = 656) from the first and third parity were randomly placed into eight pens. These eight pens were assigned to one of four treatments in a 2 × 2 factorial arrangement (two sex ratio groups × two parity groups). The first and third parity treatment groups had 1 M:4F (each pen containing 20 ganders and 80 geese) and 1 M:6F (each pen containing 14 ganders and 84 geese) sex ratio treatment groups, respectively, replicated twice.3. Blood samples were collected from the geese at different time points: upon entering the house (ST), the beginning of the lighting regime of 7 L:17D for six weeks (LC6W), lighting adjustment to 9 L:15D for 6 weeks (9C6W), the peak of egg production (PEP) and the end of egg production (EEP).4. The first parity group had a longer laying period than the third parity (274 vs.191 days). First parity had a lower egg production rate than third parity during whole stage (18.7 vs. 25.4%). Fertility in 1 M:4F group was significantly higher than in 1 M:6F rate group (54.7 vs. 45.1%) at all periods.5. Plasma levels of total protein, albumin, globulin, triglycerides, calcium and phosphorus concentrations were significantly higher for whole laying period in first parity geese compared to third parity birds.</p>","PeriodicalId":9322,"journal":{"name":"British Poultry Science","volume":" ","pages":"1-9"},"PeriodicalIF":1.6,"publicationDate":"2024-11-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142615194","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
C F D S Andrade, M N Souza, I I D S Dantas, A S K Fonseca, N Ikuta, D Kipper, V R Lunge
{"title":"<i>Salmonella enterica</i> Enteritidis and Heidelberg serotype-specific molecular detection in poultry samples by a rapid isothermal method.","authors":"C F D S Andrade, M N Souza, I I D S Dantas, A S K Fonseca, N Ikuta, D Kipper, V R Lunge","doi":"10.1080/00071668.2024.2419623","DOIUrl":"https://doi.org/10.1080/00071668.2024.2419623","url":null,"abstract":"<p><p>1. Loop-mediated isothermal amplification (LAMP) assays were developed to detect <i>Salmonella enterica</i> subspecies <i>enterica</i> serotypes Enteritidis and Heidelberg in poultry farms. These serotype-specific methods were evaluated in comparison with PCR in the analysis of different <i>Salmonella</i> spp. serotypes from a culture collection and poultry farm samples.2. The results demonstrated the specific amplification of the genetic targets <i>saf</i>A in all <i>S</i>. Enteritidis (<i>n</i> = 10) and <i>ACF69659</i> in all <i>S</i>. Heidelberg (<i>n</i> = 36) isolates from the culture collection. The remaining isolates from other <i>Salmonella</i> spp. serotypes (<i>n</i> = 84) and bacterial species (<i>n</i> = 8) were negative in both LAMP assays.3. The methods detected DNAs from <i>S</i>. Enteritidis and <i>S</i>. Heidelberg after a single-step pre-enrichment in buffered peptone water of the poultry samples, which agreed with previously developed PCR methods to detect these same two serotypes.4. In conclusion, LAMP assays were useful for rapid serotype-specific detection, being suitable for surveillance purposes in resource-limited environments such as poultry farms.</p>","PeriodicalId":9322,"journal":{"name":"British Poultry Science","volume":" ","pages":"1-7"},"PeriodicalIF":1.6,"publicationDate":"2024-11-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142615189","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
C Cai, Y Ma, L Zhang, Z An, E Zhou, X Liu, H Li, W Li, Z Li, G Li, X Liu, Y Zhang, R Han
{"title":"Genome-wide methylation and transcriptome differential analysis of skeletal muscle in broilers with valgus-varus deformity.","authors":"C Cai, Y Ma, L Zhang, Z An, E Zhou, X Liu, H Li, W Li, Z Li, G Li, X Liu, Y Zhang, R Han","doi":"10.1080/00071668.2024.2410368","DOIUrl":"https://doi.org/10.1080/00071668.2024.2410368","url":null,"abstract":"<p><p>1. Valgus-varus deformity (VVD) is a disease that severely affects leg function in broilers and for which there is no effective control method current available. Although DNA methylation has an important impact on most physiological and pathological processes, its involvement in skeletal muscle growth and development in VVD broilers is unknown. In this study, genome-wide DNA methylation was analysed in VVD-affected and normal broilers using whole genome resulphite sequencing.2. The results showed that in the cytosine-phosphoric acid-guanine (CG) sequence environment there was a methylation rate of about 55% and 4,265 differentially methylated regions (DMRs) were found in the CG. Of these, 550 were located in the promoter, 547 in the exon region, and 1,718 in the intron region.3. All differentially methylated genes (DMGs) were analysed for enrichment of Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. The GO was enriched in pathways related to protein degradation such as proteasome complex, endopeptidase complex and extracellular region. The KEGG pathways were enriched in signalling pathways related to protein degradation and catabolism such as proteasome, nitrogen metabolism, adherens junction and alanine.4. Protein interactions analysis revealed that FOS, MYL9, and FRAS1 had a high degree of interactions, in which the DNA methylation level of the <i>MYL9</i> promoter region was negatively correlated with mRNA expression level. Further studies showed that 5-azacytidine (5-AzaC) inhibited <i>DNMT1</i> and <i>DNMT3A</i> gene expression and promoted <i>MYL9</i> expression.5. This study systematically investigated overall DNA methylation patterns in the leg muscle of VVD and normal broilers. It screened common differential genes in conjunction with transcriptomic data to further identify genes associated with muscle growth and development. This study provides new insights to better understand the pathogenesis of VVD from an epigenetic perspective.</p>","PeriodicalId":9322,"journal":{"name":"British Poultry Science","volume":" ","pages":"1-12"},"PeriodicalIF":1.6,"publicationDate":"2024-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142589381","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
F B Rossi, C Simian, R Fonseca, M C Bosch, R H Marin, L Barberis, J M Kembro
{"title":"Potential of accelerometer tags for monitoring of Japanese quail (<i>Coturnix japonica</i>) reproductive behaviour.","authors":"F B Rossi, C Simian, R Fonseca, M C Bosch, R H Marin, L Barberis, J M Kembro","doi":"10.1080/00071668.2024.2399600","DOIUrl":"https://doi.org/10.1080/00071668.2024.2399600","url":null,"abstract":"<p><p>1. Monitoring behavioural dynamics in complex animal environments, such as poultry breeding facilities, poses a challenge. Utilising technological approaches, such as accelerometers, offers a solution to assess long-term changes in reproductive activity at an individual bird level. Specifically, these sensors measure acceleration associated with the position and movements of the body over time. However, it is important to assess the most suitable method for attaching accelerometer tags to ensure they do not negatively impact behaviour and yield high-quality data.2. The potential of tri-axial accelerometer tags for assessing reproductive behaviour in Japanese quail was evaluated. Two attachment methods - a backpack (plastic platform with elastic bands near wing bases) and a patch (accelerometer on fabric glued to the synsacrum region) - were compared. Controls were handled similarly but without tags. Eighteen pairs of females were housed in pens and assessed immediately and 24 h after handling. After a week of habituation, a male from the same treatment group was introduced into each pen on d 8. The reproductive behaviour of the males was recorded using accelerometers and video recordings.3. The results showed that birds with patches were able to remove their conspecific's accelerometer and displayed an increased initial immobility response compared to the control and backpack groups. The presence of accelerometer tags did not impact male/female reproductive interactions nor fear responses to a novel object. From accelerometer recordings, male reproductive behaviour was easily identified as high amplitude fluctuations in the three axial components of the acceleration vectors, which was reflected as large values of dynamic body acceleration (VeDBA).4. In conclusion, the use of backpacks with accelerometers is a useful strategy to address highly relevant and difficult to tackle behavioural topics such as the temporal dynamic of male reproductive behaviour within breeding groups.</p>","PeriodicalId":9322,"journal":{"name":"British Poultry Science","volume":" ","pages":"1-12"},"PeriodicalIF":1.6,"publicationDate":"2024-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142567624","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
M B M Maidin, H A McCormack, P W Wilson, I J Liang, B Andersson, M Schmutz, I C Dunn
{"title":"Association of keel bone morphometry with keel bone damage and skeletal quality in the laying hen.","authors":"M B M Maidin, H A McCormack, P W Wilson, I J Liang, B Andersson, M Schmutz, I C Dunn","doi":"10.1080/00071668.2024.2409191","DOIUrl":"https://doi.org/10.1080/00071668.2024.2409191","url":null,"abstract":"<p><p>1. The aim of this work was to identify a heritable keel bone phenotype with a correlation to keel bone damage and/or skeletal bone strength that could be easily measured in the living hen to aid selection to prevent welfare issues.2. The scoring system used reflected the observed damage, keel bone dimensions and shape compared to traditional measurements of bone quality.3. Increased keel bone damage was associated with poor humerus and tibia breaking strengths (<i>p</i> < 0.01). Bone damage was associated with higher whole keel density (<i>p</i> < 0.01) due to the effect of callus formation.4. Keel bone depth and area was moderately heritable at indices of 0.32 and 0.40, respectively. Keel bone depth was genetically correlated with tibia (0.36) and humerus density (0.68) and keel bone area was correlated with humerus density (0.59). Deeper keel bones and those with larger areas had small, negative phenotypic correlations with keel bone damage (-0.07 and -0.11, respectively). The second principal component of keel bone shape represented the caudal section of the keel bone and cranial edge concavity. The third principal component represented the differences in the caudal tip of the keel bone, the concavity of the dorsal edge and convexity of the ventral edge. Heritability estimates were 0.44 and 0.39, respectively.5. The results suggested that genetics contribute to morphometric traits. Hens with poorer skeletal quality are likely to accumulate more damage. Some of the traits may be a predictor of damage, although mid keel depth or concavity may simply reflect the effect of damage or deviation.</p>","PeriodicalId":9322,"journal":{"name":"British Poultry Science","volume":" ","pages":"1-9"},"PeriodicalIF":1.6,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142495552","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
S Wang, Y Liu, S Liu, Z Qin, J Lu, R Zhang, H Yuan
{"title":"Consensus gene co-expression analysis across multiple intestinal tissues to identify key genes and pathways associated with abdominal fat deposition in broilers.","authors":"S Wang, Y Liu, S Liu, Z Qin, J Lu, R Zhang, H Yuan","doi":"10.1080/00071668.2024.2410367","DOIUrl":"https://doi.org/10.1080/00071668.2024.2410367","url":null,"abstract":"<p><p>1. Abdominal fat deposition (AFD) is regulated by multiple intestinal tissues, and changes in the function of intestinal tissues are associated with AFD. Currently, integration of transcriptomic data across multiple intestinal tissues to explore excessive AFD has rarely been reported in broilers.2. In this study, a consensus gene co-expression network across the duodenum, jejunum, ileum and caecum of high- and low-abdominal fat broiler lines (HL and LL) was constructed using a publicly available transcriptomic data set. Combining the results of functional enrichment analyses and differential gene expression analyses, this investigated the genes and biological pathways across the four intestinal tissues that might influence AFD.3. In one expression module, <i>NDUFA5</i>, <i>NDUFS6</i>, <i>NDUFA4</i>, <i>NDUFS4</i>, <i>ATP5H</i>, <i>ATP5J</i> and <i>ATP5C1</i> were significantly enriched in the oxidative phosphorylation pathway, with <i>GPX2</i> and <i>GSR</i> significantly enriched in the glutathione metabolism pathway. These genes were significantly downregulated in the four intestinal tissues of the HL compared to LL chickens, which may be associated with AFD by increasing intestinal permeability.4. Lipid metabolism relevant genes were identified in other modules (<i>ALDH7A1</i>, <i>ACSBG1</i>, <i>THEM4</i> and <i>DECR1</i>), which may be linked to AFD through regulation of lipid metabolism. Interestingly, in the first module, 12 genes were significantly enriched in the proteasome pathway and significantly downregulated in the four intestinal tissues in HL birds compared to LL birds, indicating a link between the proteasome and AFD.</p>","PeriodicalId":9322,"journal":{"name":"British Poultry Science","volume":" ","pages":"1-11"},"PeriodicalIF":1.6,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142495553","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
T Shynkaruk, M Parsons, C A B Adler, C Goeree, K Long, K Schwean-Lardner
{"title":"Does the distribution of light intensity within the barn impact broiler production and welfare?","authors":"T Shynkaruk, M Parsons, C A B Adler, C Goeree, K Long, K Schwean-Lardner","doi":"10.1080/00071668.2024.2414460","DOIUrl":"https://doi.org/10.1080/00071668.2024.2414460","url":null,"abstract":"<p><p>1. The objective of this study was to determine if rearing broilers under variable light intensity (VLI) impacted their welfare or productivity.2. Ross 308 broilers (<i>n</i> = 7,256) were reared until 35 d of age and exposed to a uniform intensity of 10 lux (CON) or VLI with low intensity areas of 2-5 lux proximal to the walls and high intensity areas of 84-133 lux proximal to feeders.3. The data were analysed as a complete randomised design using an analysis of variance. Significance was declared when <i>p</i> ≤ 0.05.4. Applying VLI resulted in increased feed intake early in life but had no impact on body weight. Overall efficiency was improved in the CON treatment. Mortality diagnoses of skeletal problems were reduced under VLI. Treatment had no impact on footpad, hock or gait score, heterophil to lymphocyte ratio or melatonin concentration. Birds performed certain behaviours in specific locations within the room, independent of light intensity treatment.5. In conclusion, raising broilers under VLI had little impact on production or most welfare parameters assessed in this study. However, satisfying the bird's preference for different light intensities may improve welfare.</p>","PeriodicalId":9322,"journal":{"name":"British Poultry Science","volume":" ","pages":"1-9"},"PeriodicalIF":1.6,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142495555","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}