American Journal of Botany最新文献

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Are plant traits drivers of endophytic communities in seasonally flooded tropical forests? 植物性状是季节性洪涝热带森林中内生菌群落的驱动力吗?
IF 2.4 2区 生物学
American Journal of Botany Pub Date : 2024-07-16 DOI: 10.1002/ajb2.16366
Marion Boisseaux, Valérie Troispoux, Alice Bordes, Jocelyn Cazal, Saint-Omer Cazal, Sabrina Coste, Clément Stahl, Heidy Schimann
{"title":"Are plant traits drivers of endophytic communities in seasonally flooded tropical forests?","authors":"Marion Boisseaux, Valérie Troispoux, Alice Bordes, Jocelyn Cazal, Saint-Omer Cazal, Sabrina Coste, Clément Stahl, Heidy Schimann","doi":"10.1002/ajb2.16366","DOIUrl":"https://doi.org/10.1002/ajb2.16366","url":null,"abstract":"<p><strong>Premise: </strong>In the Amazon basin, seasonally flooded (SF) forests offer varying water constraints, providing an excellent way to investigate the role of habitat selection on microbial communities within plants. However, variations in the microbial community among host plants cannot solely be attributed to environmental factors, and how plant traits contribute to microbial assemblages remains an open question.</p><p><strong>Methods: </strong>We described leaf- and root-associated microbial communities using ITS2 and 16 S high-throughput sequencing and investigated the stochastic-deterministic balance shaping these community assemblies using two null models. Plant ecophysiological functioning was evaluated by focusing on 10 leaf and root traits in 72 seedlings, belonging to seven tropical SF tree species in French Guiana. We then analyzed how root and leaf traits drove the assembly of endophytic communities.</p><p><strong>Results: </strong>While both stochastic and deterministic processes governed the endophyte assembly in the leaves and roots, stochasticity prevailed. Discrepancies were found between fungi and bacteria, highlighting that these microorganisms have distinct ecological strategies within plants. Traits, especially leaf traits, host species and spatial predictors better explained diversity than composition, but they were modest predictors overall.</p><p><strong>Conclusions: </strong>This study widens our knowledge about tree species in SF forests, a habitat sensitive to climate change, through the combined analyses of their associated microbial communities with functional traits. We emphasize the need to investigate other plant traits to better disentangle the drivers of the relationship between seedlings and their associated microbiomes, ultimately enhancing their adaptive capacities to climate change.</p>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-07-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141619017","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cretaceous and Paleocene fossils reveal an extinct higher clade within Cornales, the dogwood order 白垩纪和古新世的化石揭示了山茱萸目中一个已经灭绝的更高支系。
IF 2.4 2区 生物学
American Journal of Botany Pub Date : 2024-07-15 DOI: 10.1002/ajb2.16372
Austin T. Nguyen, Brian A. Atkinson
{"title":"Cretaceous and Paleocene fossils reveal an extinct higher clade within Cornales, the dogwood order","authors":"Austin T. Nguyen,&nbsp;Brian A. Atkinson","doi":"10.1002/ajb2.16372","DOIUrl":"10.1002/ajb2.16372","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Characterization and phylogenetic integration of fossil angiosperms with uncertain affinities is relatively limited, which may obscure the diversity of extinct higher taxa in the flowering plant tree of life. The order Cornales contains a diversity of extinct taxa with uncertain familial affinities that make it an ideal group for studying turnover in angiosperms. Here, we describe a new extinct genus of Cornales unassignable to an extant family and conduct a series of phylogenetic analyses to reconstruct relationships of fossils across the order.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>Two permineralized endocarps were collected from the Cedar District Formation (Campanian, 82–80 Ma) of Sucia Island, State of Washington, United States. Fossils were sectioned with the cellulose acetate peel technique and incorporated into a morphological dataset. To assess the utility of this dataset to accurately place taxa in their respective clades, we used a series of phylogenetic pseudofossilization analyses. We then conducted a total-evidence analysis and a scaffold-based approach to determine relationships of fossils.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Based on their unique combination of characters, the fossils represent a new genus, <i>Fenestracarpa washingtonensis</i> gen. nov. et sp. nov. Pseudofossilization analyses indicate that our morphological dataset can be used to accurately recover taxa at the major clade to family level, generally with moderate to high support. The total-evidence and scaffold-based analyses recovered <i>Fenestracarpa</i> and other fossil genera in an entirely extinct clade within Cornales.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Our findings increase the reported diversity of extinct Cornales and indicate that the order's initial radiation likely included the divergence of an extinct higher clade that endured the end-Cretaceous Mass extinction but perished during the Cenozoic.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141619087","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Salt tolerance in a neotropical orchid in the absence of local adaptation to salt spray 一种新热带兰花在当地不适应盐雾的情况下的耐盐性。
IF 2.4 2区 生物学
American Journal of Botany Pub Date : 2024-07-15 DOI: 10.1002/ajb2.16373
Thales M. de Lima, Simone F. Silva, Rafael V. Ribeiro, Julia Sánchez-Vilas, Fabio Pinheiro
{"title":"Salt tolerance in a neotropical orchid in the absence of local adaptation to salt spray","authors":"Thales M. de Lima,&nbsp;Simone F. Silva,&nbsp;Rafael V. Ribeiro,&nbsp;Julia Sánchez-Vilas,&nbsp;Fabio Pinheiro","doi":"10.1002/ajb2.16373","DOIUrl":"10.1002/ajb2.16373","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Salt tolerance has rarely been investigated regionally in the neotropics and even more rarely in Orchidaceae, one of the largest families. Therefore, investigating local adaptation to salt spray and its physiological basis in <i>Epidendrum fulgens</i>, a neotropical orchid species, brings important new insights.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We assessed the degree of salt tolerance in <i>E. fulgens</i> by testing whether coastal populations are more tolerant to salt, which could point to local adaptation. To understand the physiological basis of such salt tolerance, we exposed wild-collected individuals to salt spray for 60 days, then measured leaf expansion, osmotic potential, sodium leaf concentration, chlorophyll leaf index, chlorophyll fluorescence, relative growth rate, and pressure–volume curves.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>There is no local adaptation to salt spray since both inland and coastal plants have a high tolerance to salt stress. This tolerance is explained by the ability to tolerate high concentrations of salt in leaf tissues, which is related to the high succulence displayed by this species.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>We showed an unprecedented salt tolerance level for an orchid species, highlighting our limited knowledge of that trait beyond the traditional studied groups. Another interesting finding is that salt tolerance in <i>E. fulgens</i> is linked to succulence, is widespread, and is not the result of local adaptation. We suggest that <i>E. fulgens</i> and its allied species could be an interesting group to explore the evolution of important traits related to tolerance to salt stress, like succulence.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141619089","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of anther-stigma position on cross-pollination efficiency in a hermaphroditic plant 花药柱头位置对两性植物异花授粉效率的影响。
IF 2.4 2区 生物学
American Journal of Botany Pub Date : 2024-07-15 DOI: 10.1002/ajb2.16377
Matias C. Baranzelli, Manuel Ochoa-Sánchez, Sergio E. Ramos, Fernanda Baena-Díaz, Paula Sosenski, Karina Boege, Cesar A. Domínguez, Juan Fornoni
{"title":"Effects of anther-stigma position on cross-pollination efficiency in a hermaphroditic plant","authors":"Matias C. Baranzelli,&nbsp;Manuel Ochoa-Sánchez,&nbsp;Sergio E. Ramos,&nbsp;Fernanda Baena-Díaz,&nbsp;Paula Sosenski,&nbsp;Karina Boege,&nbsp;Cesar A. Domínguez,&nbsp;Juan Fornoni","doi":"10.1002/ajb2.16377","DOIUrl":"10.1002/ajb2.16377","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Evolution of cross-pollination efficiency depends on the genetic variation of flower traits, the pollen vector, and flower trait matching between pollen donors and recipients. Trait matching has been almost unexplored among nonheterostylous species, and we examined whether the match of anther length in pollen donors and stigma length in pollen recipients influences the efficiency of cross-pollination. To explore potential constraints for evolutionary response, we also quantified genetic variation and covariation among sepal length, petal length and width, stamen length, style length, and herkogamy.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We created 58 experimental arrays of <i>Turnera velutina</i> that varied in the extent of mismatch in the position of anthers and stigmas between single-flowered plants. Genetic variation and correlations among flower traits were estimated under greenhouse conditions.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Style length, but not herkogamy, influenced the efficiency of cross-pollination. Plants with stamen length that matched the style length of other plants were more efficient pollen donors, whereas those with the style protruding above the stamens of other plants were more efficient pollen recipients. Significant broad-sense heritability (0.22 &gt; <i>h</i><sub>B</sub><sup>2</sup> &lt; 0.42) and moderate genetic correlations (0.33 &gt; <i>r</i> &lt; 0.85) among floral traits were detected.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Our results demonstrated that anther-stigma mismatch between flowers contributed to variation in the efficiency of cross-pollination. The genetic correlations between stamen length and other floral traits suggests that any change in cross-pollination efficiency would be driven by changes in style rather than in stamen length.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ajb2.16377","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141619088","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The timing of visits by large and small bees differentially affects pollination success in Mimulus ringens 大蜜蜂和小蜜蜂来访的时间不同会影响环斑绣线菊的授粉成功率。
IF 2.4 2区 生物学
American Journal of Botany Pub Date : 2024-07-14 DOI: 10.1002/ajb2.16375
Randall J. Mitchell, Dana Starvaggi, Victor Fitzgerald, Jeffrey D. Karron
{"title":"The timing of visits by large and small bees differentially affects pollination success in Mimulus ringens","authors":"Randall J. Mitchell,&nbsp;Dana Starvaggi,&nbsp;Victor Fitzgerald,&nbsp;Jeffrey D. Karron","doi":"10.1002/ajb2.16375","DOIUrl":"10.1002/ajb2.16375","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Cross-fertilization in most flowering plants is facilitated by mobile animals that transport pollen while foraging for floral rewards. The contributions of different visitors can vary widely, depending on the amount of pollen transferred during a single visit and on the frequency and timing of the visits of each pollinator taxon.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We used three approaches to measure the pollination value of bees that visit <i>Mimulus ringens</i>: pollinator interviews, field population observations, and caging studies.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>The single-visit effectiveness of small bees (primarily Halictidae) was only half that of larger bees (primarily <i>Bombus</i>) for pollen delivery and removal. In five field populations, we found substantial temporal and spatial variation in visitation and pollination. In most sites big bees were active before 08:00 hours, and by 10:00–11:00 hours, stigmas were usually fully pollinated and closed, and little pollen remained in anthers. Small bees seldom visited before 10:00 hours. Excluding big bees from plants confirmed that pollination is reduced and delayed in this ecological context.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Big bees are the primary pollinators of <i>M. ringens</i>, accounting for at least 75% of seed production. Not only are they more effective per visit, in most situations they also visit before small bees become active. Although small bees are not usually important pollinators of <i>M. ringens</i>, they have the potential to partially replace them as a “fail-safe” pollinator in contexts where big bees are not abundant. In a world where pollinator abundance is declining, such backup pollinators may be important for maintaining plant reproduction.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-07-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ajb2.16375","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141615764","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Striking genetic homogeneity in the widespread South American bracken 广泛分布的南美洲蕨类植物具有惊人的遗传同质性。
IF 2.4 2区 生物学
American Journal of Botany Pub Date : 2024-07-12 DOI: 10.1002/ajb2.16374
Agustina Yañez, Sylvia P. Kinosian, M. Mónica Ponce, Diego G. Gutierrez, Pedro B. Schwartsburd, Michael Sundue, Paul G. Wolf
{"title":"Striking genetic homogeneity in the widespread South American bracken","authors":"Agustina Yañez,&nbsp;Sylvia P. Kinosian,&nbsp;M. Mónica Ponce,&nbsp;Diego G. Gutierrez,&nbsp;Pedro B. Schwartsburd,&nbsp;Michael Sundue,&nbsp;Paul G. Wolf","doi":"10.1002/ajb2.16374","DOIUrl":"10.1002/ajb2.16374","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Bracken (<i>Pteridium</i>, Dennstaedtiaceae) is a cosmopolitan genus of aggressive disturbance colonizers that are toxic to agricultural livestock. The taxonomy of <i>Pteridium</i> has been treated in multiple schemes, ranging from one to six species worldwide, with numerous subspecies and varieties. Recent work has focused on the worldwide distribution and systematics of the bracken fern, but South America has been poorly represented. We present the first continent-wide sampling and analysis of <i>Pteridium esculentum</i>, a Southern Hemisphere diploid species.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>Within South America, <i>P. esculentum</i> has several morphotypes, distinguished into subspecies by variation in indument and lamina architecture. We used double digest restriction site-associated DNA sequencing (ddRADSeq) to assess the phylogenetic relationships of <i>P. esculentum</i> subspecies.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>We found a striking genetic homogeneity in the species, being able to support only two morphotypes from molecular data: <i>P. e. arachnoideum</i> and <i>P. e. campestre</i>. We had high confidence for shallow and deep phylogenetic relationships, but less support for relationships among crown groups.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>We describe an east-west geographic pattern that would explain the relationships between populations; and, in contrast to previous studies, we detected differences with <i>P. esculentum</i> from Australia. These results will lay the foundations for studying variations in this species' behavior as a weed, as well as its impact on the production of agricultural livestock in South America.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-07-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141598106","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
High-intensity light promotes adaptive divergence of photosynthetic traits between sun-exposed and shaded populations in Saxifraga fortunei 高强度光促进了 Saxifraga fortunei 暴露于阳光和遮蔽于阳光的种群之间光合特性的适应性分化。
IF 2.4 2区 生物学
American Journal of Botany Pub Date : 2024-07-12 DOI: 10.1002/ajb2.16371
Kana Magota, Eiji Gotoh, Shota Sakaguchi, Hajime Ikeda, Hiroaki Setoguchi
{"title":"High-intensity light promotes adaptive divergence of photosynthetic traits between sun-exposed and shaded populations in Saxifraga fortunei","authors":"Kana Magota,&nbsp;Eiji Gotoh,&nbsp;Shota Sakaguchi,&nbsp;Hajime Ikeda,&nbsp;Hiroaki Setoguchi","doi":"10.1002/ajb2.16371","DOIUrl":"10.1002/ajb2.16371","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Light is essential for plants, and local populations exhibit adaptive photosynthetic traits depending on their habitats. Although plastic responses in morphological and/or physiological characteristics to different light intensities are well known, adaptive divergence with genetic variation remains to be explored. This study focused on <i>Saxifraga fortunei</i> (Saxifragaceae) growing in sun-exposed and shaded habitats.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We measured the leaf anatomical structure and photosynthetic rate of plants grown in their natural habitats and in a common greenhouse (high- and low-intensity light experimental sites). To assess differences in ecophysiological tolerance to high-intensity light between the sun and shade types, we evaluated the level of photoinhibition of photosystem II and the leaf mortality rate under high-intensity light conditions. In addition, population genetic analysis was conducted to investigate phylogenetic origins.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Clear phenotypic differences were found between the sun and shade types despite their recent phylogenetic origin. The leaf anatomical structure and photosynthetic rate showed plastic changes in response to growing conditions. Moreover, the sun type had a well-developed palisade parenchyma and a higher photosynthetic rate, which were genetically fixed, and a lower level of photoinhibition under high-intensity light.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Our findings demonstrate that light intensity is a selective pressure that can rapidly promote phenotypic divergence between the sun and shade types. While phenotypic changes in multiple photosynthetic traits were plastic, genetic divergence in specific traits related to adaptation to high-intensity light would be fundamental for ecotypic divergence to different light regimes.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-07-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141598105","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Plastid genome evolution in leafless members of the orchid subfamily Orchidoideae, with a focus on Degranvillea dermaptera 兰花亚科兰属无叶植物的质体基因组进化,重点是Degranvillea dermaptera。
IF 2.4 2区 生物学
American Journal of Botany Pub Date : 2024-07-11 DOI: 10.1002/ajb2.16370
Craig F. Barrett, Matthew C. Pace, Cameron W. Corbett
{"title":"Plastid genome evolution in leafless members of the orchid subfamily Orchidoideae, with a focus on Degranvillea dermaptera","authors":"Craig F. Barrett,&nbsp;Matthew C. Pace,&nbsp;Cameron W. Corbett","doi":"10.1002/ajb2.16370","DOIUrl":"10.1002/ajb2.16370","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Leafless, heterotrophic plants are prime examples of organismal modification, the genomic consequences of which have received considerable interest. In particular, plastid genomes (plastomes) are being sequenced at a high rate, allowing continual refinement of conceptual models of reductive evolution in heterotrophs. However, numerous sampling gaps exist, hindering the ability to conduct comprehensive phylogenomic analyses in these plants.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>Using floral tissue from an herbarium specimen, we sequenced and analyzed the plastome of <i>Degranvillea dermaptera</i>, a rarely collected, leafless orchid species from South America about which little is known, including its phylogenetic affinities.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>The plastome is the most reduced of those sequenced among the orchid subfamily Orchidoideae. In <i>Degranvillea</i>, it has lost the majority of genes found in leafy autotrophic species, is structurally rearranged, and has similar gene content to the most reduced plastomes among the orchids. We found strong evidence for the placement of <i>Degranvillea</i> within the subtribe Spiranthinae using models that explicitly account for heterotachy, or lineage-specific evolutionary rate variation over time. We further found evidence of relaxed selection on several genes and of correlations among substitution rates and several other “traits” of the plastome among leafless members of orchid subfamily Orchidoideae.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Our findings advance knowledge on the phylogenetic relationships and paths of plastid genome evolution among the orchids, which have experienced more independent transitions to heterotrophy than any other plant family. This study demonstrates the importance of herbarium collections in comparative genomics of poorly known species of conservation concern.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-07-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141578751","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Measuring leaf and root functional traits uncovers multidimensionality of plant responses to arbuscular mycorrhizal fungi 测量叶片和根系的功能特征可发现植物对假根菌根真菌反应的多维性。
IF 2.4 2区 生物学
American Journal of Botany Pub Date : 2024-07-11 DOI: 10.1002/ajb2.16369
Katherine N. Stahlhut, Deannah G. Neupert, Josie E. Laing, Lydia J. Witt, Jonathan T. Bauer
{"title":"Measuring leaf and root functional traits uncovers multidimensionality of plant responses to arbuscular mycorrhizal fungi","authors":"Katherine N. Stahlhut,&nbsp;Deannah G. Neupert,&nbsp;Josie E. Laing,&nbsp;Lydia J. Witt,&nbsp;Jonathan T. Bauer","doi":"10.1002/ajb2.16369","DOIUrl":"10.1002/ajb2.16369","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>While many studies have measured the aboveground responses of plants to mycorrhizal fungi at a single time point, little is known about how plants respond belowground or across time to mycorrhizal symbiosis. By measuring belowground responses and growth over time in many plant species, we create a more complete picture of how mycorrhizal fungi benefit their hosts.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We grew 26 prairie plant species with and without mycorrhizal fungi and measured 14 functional traits to assess above- and belowground tissue quality and quantity responses and changes in resource allocation. We used function-valued trait (FVT) modeling to characterize changes in species growth rate when colonized.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>While aboveground biomass responses were positive, the response of traits belowground were much more variable. Changes in aboveground biomass accounted for 60.8% of the variation in mycorrhizal responses, supporting the use of aboveground biomass response as the primary response trait. Responses belowground were not associated with aboveground responses and accounted for 18.3% of the variation. Growth responses over time were highly variable across species. Interestingly, none of the measured responses were phylogenetically conserved.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Mycorrhizal fungi increase plant growth in most scenarios, but the effects of these fungi belowground and across time are more complicated. This study highlights how differences in plant allocation priorities might affect how they utilize the benefits from mycorrhizal fungi. Identifying and characterizing these differences is a key step to understanding the effects of mycorrhizal mutualisms on whole plant physiology.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-07-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ajb2.16369","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141578750","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evidence for human-caused founder effect in populations of Solanum jamesii at archaeological sites: II. Genetic sequencing establishes ancient transport across the Southwest USA 考古遗址中茄科植物种群的人类始祖效应证据:II.基因测序确定了跨越美国西南部的古代迁移。
IF 2.4 2区 生物学
American Journal of Botany Pub Date : 2024-07-11 DOI: 10.1002/ajb2.16365
Bruce M. Pavlik, Alfonso del Rio, John Bamberg, Lisbeth A. Louderback
{"title":"Evidence for human-caused founder effect in populations of Solanum jamesii at archaeological sites: II. Genetic sequencing establishes ancient transport across the Southwest USA","authors":"Bruce M. Pavlik,&nbsp;Alfonso del Rio,&nbsp;John Bamberg,&nbsp;Lisbeth A. Louderback","doi":"10.1002/ajb2.16365","DOIUrl":"10.1002/ajb2.16365","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>The domestication of wild plant species can begin with gathering and transport of propagules by Indigenous peoples. The effect on genomic composition, especially in clonal, self-incompatible perennials would be instantaneous and drastic with respect to new, anthropogenic populations subsequently established. Reductions in genetic diversity and mating capability would be symptomatic and the presence of unique alleles and genetic sequences would reveal the origins and ancestry of populations associated with archaeological sites. The current distribution of the Four Corners potato, <i>Solanum jamesii</i> Torr. in the Southwestern USA, may thus reflect the early stages of a domestication process that began with tuber transport.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>Herein genetic sequencing (GBS) data are used to further examine the hypothesis of domestication in this culturally significant species by sampling 25 archaeological and non-archaeological populations.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Archaeological populations from Utah, Colorado and northern Arizona have lower levels of polymorphic loci, unique alleles, and heterozygosity than non-archaeological populations from the Mogollon region of central Arizona and New Mexico. Principle components analysis, Fst values, and structure analysis revealed that genetic relationships among archaeological populations did not correspond to geographic proximity. Populations in Escalante, Utah were related to those on the Mogollon Rim (400 km south) and had multiple origins and significant disjunctions with those populations in Bears Ears, Chaco Canyon, and Mesa Verde sites.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Movement of tubers from the Mogollon region may have occurred many times and in multiple directions during the past, resulting in the complex genetic patterns seen in populations from across the Four Corners region.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-07-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ajb2.16365","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141589380","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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