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No Detection of SARS-CoV-2 RNA on Urethral Swab in Patients with Positive Nasopharyngeal Swab. 鼻咽拭子阳性患者尿道拭子未检出SARS-CoV-2 RNA。
IF 2.2
Advances in Virology Pub Date : 2020-12-09 eCollection Date: 2020-01-01 DOI: 10.1155/2020/8826943
Lorenzo Spirito, Biagio Pinchera, Angela Patrì, Mario Delfino, Ciro Imbimbo, Paola Salvatore, Ivan Gentile, Gabriella Fabbrocini
{"title":"No Detection of SARS-CoV-2 RNA on Urethral Swab in Patients with Positive Nasopharyngeal Swab.","authors":"Lorenzo Spirito, Biagio Pinchera, Angela Patrì, Mario Delfino, Ciro Imbimbo, Paola Salvatore, Ivan Gentile, Gabriella Fabbrocini","doi":"10.1155/2020/8826943","DOIUrl":"10.1155/2020/8826943","url":null,"abstract":"<p><strong>Background: </strong>The SARS-CoV-2 infection has caused one of the worst pandemics that history has ever known. SARS-CoV-2 can lead to multiple organ failure, which is life-threatening. Viral RNA is found in the lung, intestine, testicle, kidney, etc., which suggests the virus can be transmitted also via routes besides respiratory droplets. The aim of our study was to evaluate the presence of SARS-CoV-2 in urethral swabs.</p><p><strong>Methods: </strong>We enrolled ten patients with SARS-CoV-2 infection who attended the Infectious Diseases Unit of the A.O.U. Federico II of Naples, from March 2020 to April 2020. One urethral swab and one rhino-oropharyngeal swab were collected from each patient during SARS-CoV-2 infection.</p><p><strong>Results: </strong>All ten patients had a negative urethral swab for SARS-CoV-2 RNA, whereas the rhino-oropharyngeal swab was positive for SARS-CoV-2 RNA. This finding demonstrates that, in our patients, the virus did not affect the urinary tract and therefore would not be found in the urine, and even more importantly, it would not be transmitted via urine. This result was independent of the stage of the disease.</p><p><strong>Conclusion: </strong>If confirmed in larger studies, this observation could be the key to understanding the role of SARS-CoV-2 in relation to the genitourinary system.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7729391/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38762385","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
HBV Core Promoter Inhibition by Tubulin Polymerization Inhibitor (SRI-32007). 微管蛋白聚合抑制剂(SRI-32007)抑制HBV核心启动子。
IF 2.2
Advances in Virology Pub Date : 2020-10-14 eCollection Date: 2020-01-01 DOI: 10.1155/2020/8844061
Raj Kalkeri, Junzhong Peng, Chunsheng Huang, Zhaohui Cai, Roger G Ptak, Mark J Suto
{"title":"HBV Core Promoter Inhibition by Tubulin Polymerization Inhibitor (SRI-32007).","authors":"Raj Kalkeri,&nbsp;Junzhong Peng,&nbsp;Chunsheng Huang,&nbsp;Zhaohui Cai,&nbsp;Roger G Ptak,&nbsp;Mark J Suto","doi":"10.1155/2020/8844061","DOIUrl":"https://doi.org/10.1155/2020/8844061","url":null,"abstract":"<p><p>Approximately 257 million people chronically infected with hepatitis B virus (HBV) worldwide are at risk of developing hepatocellular carcinoma (HCC). However, despite the availability of potent nucleoside/tide inhibitors, currently there are no curative therapies for chronic HBV infections. To identify potential new antiviral molecules, a select group of compounds previously evaluated in clinical studies were tested against 12 different viruses. Amongst the compounds tested, SRI-32007 (CYT997) demonstrated antiviral activity against HBV (genotype D) in HepG2.2.2.15 cell-based virus yield assay with 50% effective concentration (EC<sub>50</sub>) and selectivity index (SI) of 60.1 nM and 7.2, respectively. Anti-HBV activity of SRI-32007 was further confirmed against HBV genotype B in huh7 cells with secreted HBe antigen endpoint (EC<sub>50</sub> 40 nM and SI 250). To determine the stage of HBV life cycle inhibited by SRI-32007, time of addition experiment was conducted in HepG<sub>2</sub>-NTCP cell-based HBV infectious assay. Results indicated that SRI-32007 retained anti-HBV activity even when added 72 hours postinfection (72 h). Additional mechanism of action studies demonstrated potent inhibition of HBV core promoter activity by SRI-32007 with an EC<sub>50</sub> of 40 nM and SI of >250. This study demonstrates anti-HBV activity of a repurposed compound SRI-32007 through inhibition of HBV core promoter activity. Further evaluation of SRI-32007 in HBV animal models is needed to confirm its activity in vivo. Our experiments illustrate the utility of repurposing strategy to identify novel antiviral chemical leads. HBV core promoter inhibitors such as SRI-32007 might enable the development of novel therapeutic strategies to combat HBV infections.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1155/2020/8844061","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38533366","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Human Papillomavirus Prevalence in Oral and Oropharyngeal Rinse and Gargle Specimens of Dental Patients and of an HIV-Positive Cohort from Pretoria, South Africa. 来自南非比勒陀利亚的牙科患者和hiv阳性队列口腔和口咽漱口水标本中人类乳头瘤病毒的流行
IF 2.2
Advances in Virology Pub Date : 2020-08-26 eCollection Date: 2020-01-01 DOI: 10.1155/2020/2395219
Neil H Wood, Koketso S Makua, Ramokone L Lebelo, Nina Redzic, Ina Benoy, Olivier M Vanderveken, Johannes Bogers
{"title":"Human Papillomavirus Prevalence in Oral and Oropharyngeal Rinse and Gargle Specimens of Dental Patients and of an HIV-Positive Cohort from Pretoria, South Africa.","authors":"Neil H Wood,&nbsp;Koketso S Makua,&nbsp;Ramokone L Lebelo,&nbsp;Nina Redzic,&nbsp;Ina Benoy,&nbsp;Olivier M Vanderveken,&nbsp;Johannes Bogers","doi":"10.1155/2020/2395219","DOIUrl":"https://doi.org/10.1155/2020/2395219","url":null,"abstract":"<p><strong>Introduction: </strong>Studies on HPV prevalence in the head and neck region of South Africans are sparse. Of the available reports in the literature, there were no studies on the association between HPV-DNA presence in the mouth and oropharynx in relation to high-risk behaviours such as oral sex practice or tobacco and alcohol use.</p><p><strong>Materials and methods: </strong>Following ethical clearance and informed consent, patients attending a regional HIV-management clinic and patients attending a dental hospital were recruited to this study. The participants completed an interview-based questionnaire obtaining demographic information, data on HIV serostatus, and behavioural data including sexual practices and tobacco and alcohol use, and a rinse-and-gargle specimen was taken. Specimens were analysed for HPV DNA on 3 separate PCR/qPCR platforms. Statistical analyses were performed for associations between the study group and categorical variables, HPV status, and data from the questionnaires.</p><p><strong>Results: </strong>Of 221 participants, 149 were from a general population and 72 from the HIV-management clinic. Smokers comprised 29.4% of the sample, and 45.2% of participants reported to have ever used alcohol. Open mouth kissing during teenage years was confirmed by 64.7% of participants, 40.3% have given oral sex with their mouth, and 44.8% confirmed to have received oral sex from their partner's mouth. Seven participants (3.2%) had detectable <i>α</i>-HPV DNA, and 1 (0.4%) had detectable <i>β</i>-HPV DNA in their rinse-and-gargle specimens. Two participants were from the HIV-management clinic and 6 from the general dental population (overall 3.6%).</p><p><strong>Conclusion: </strong>Five high-risk HPV, 2 low-risk HPV, and one <i>β</i>-HPV types were detected. The low prevalence of 3.6% compares well to similar studies in different cohorts studied in South Africa and falls within the global oral/oropharyngeal prevalence spectrum. Only 4 participants, all from the HIV-management clinic, had palatine tonsils. No significant relationships were found between HPV presence and demographic data or sexual, oral sexual, tobacco use, or alcohol use, and no associations were seen with numbers of sexual and oral-sex partners.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-08-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1155/2020/2395219","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38364074","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Quadruple Therapy Offers High SVR Rates in Patients with HCV Genotype 4 with Previous Treatment Failure. 四联疗法对先前治疗失败的HCV基因型4患者提供高SVR率。
IF 2.2
Advances in Virology Pub Date : 2020-07-24 eCollection Date: 2020-01-01 DOI: 10.1155/2020/9075905
Yousry Esam-Eldin Abo-Amer, Rehab Badawi, Mohamed El-Abgeegy, Heba Fadl Elsergany, Ahmed Abdelhaleem Mohamed, Sahar Mohamed Mostafa, Hatem Samir Alegaily, Shaimaa Soliman, Sally Elnawasany, Sherief Abd-Elsalam
{"title":"Quadruple Therapy Offers High SVR Rates in Patients with HCV Genotype 4 with Previous Treatment Failure.","authors":"Yousry Esam-Eldin Abo-Amer, Rehab Badawi, Mohamed El-Abgeegy, Heba Fadl Elsergany, Ahmed Abdelhaleem Mohamed, Sahar Mohamed Mostafa, Hatem Samir Alegaily, Shaimaa Soliman, Sally Elnawasany, Sherief Abd-Elsalam","doi":"10.1155/2020/9075905","DOIUrl":"10.1155/2020/9075905","url":null,"abstract":"<p><strong>Background and aims: </strong>Direct-acting antivirals (DAAs) have made a revolution in hepatitis C virus (HCV) treatment with promising reduction of HCV infection and disease morbidities. However, unfortunately, treatment failure still occurs in about 5-15% of patients treated with DAA-based combination regimens. The primary aim of the study was to assess the efficacy and safety of a quadruple regimen of (sofosbuvir, daclatasvir, and simeprevir with a weight-based ribavirin) in chronic HCV DAAs-experienced patients.</p><p><strong>Methods: </strong>This observational, open-label prospective study was carried out on 103 genotype 4 hepatitis C virus-infected patients who failed to achieve SVR12 after sofosbuvir-daclatasvir with or without ribavirin. Patients were treated for three months with sofosbuvir (400 mg), daclatasvir (60 mg), and simeprevir (150 mg) with a weight-based ribavirin dosage (1000-1200 mg/d). Response to treatment was determined by quantitative PCR for HCV at 3 months after the end of treatment (SVR12), and adverse events during the treatment were recorded.</p><p><strong>Results: </strong>SVR was achieved in 100 patients (97.1%) at week 12 after treatment. No dangerous or life-threatening adverse events were recorded.</p><p><strong>Conclusions: </strong>Retreatment of HCV genotype 4 patients with quadruple therapy is a good therapeutic option and achieves high response rates with minimal side effects.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1155/2020/9075905","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38255357","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Occurrence of Enteric Viruses in Surface Water and the Relationship with Changes in Season and Physical Water Quality Dynamics. 地表水中肠道病毒的发生及其与季节变化和水质物理动态的关系
IF 2.2
Advances in Virology Pub Date : 2020-07-03 eCollection Date: 2020-01-01 DOI: 10.1155/2020/9062041
Wasonga Michael Opere, Maingi John, Omwoyo Ombori
{"title":"Occurrence of Enteric Viruses in Surface Water and the Relationship with Changes in Season and Physical Water Quality Dynamics.","authors":"Wasonga Michael Opere,&nbsp;Maingi John,&nbsp;Omwoyo Ombori","doi":"10.1155/2020/9062041","DOIUrl":"https://doi.org/10.1155/2020/9062041","url":null,"abstract":"<p><p>Environmental water quality issues have dominated global discourse and studies over the past five decades. Significant parameters of environmental water quality include changes in biological and physical parameters. Some of the biological parameters of significance include occurrence of enteric viruses. Enteric viruses can affect both human and animal's health by causing diseases such as gastrointestinal and respiratory infections. In this study, the relationship between the occurrence of enteric viruses with reference to adenoviruses and enteroviruses and the physical water quality characteristics was assessed from water samples collected from Lake Victoria (LV) in Kenya. In order to understand the dynamics of season driven enteric viruses' contamination of the lake waters, we additionally analysed seasonal behavior of the lake's catchment area in terms of rainfall effects. Physical quality parameters were measured on-site while viral analysis was carried out by molecular methods using the nested polymerase chain reaction (nPCR). From 216 samples that were analysed for viral contamination, enteric viral genomes were discovered in 18 (8.3%) of the samples. Out of half of the samples (108) collected during the rainy season, enteric viral genomes were detected in 9.26% (10) while 8 (7.41%) samples tested positive from the other half of the samples (108) collected during the dry season. There was, however, no significant correlation noted between the physical water quality characteristics and the enteric viruses' occurrence. Neither wet season nor dry season was significantly associated with the prevalence of the viruses. In Lake Victoria waters, most of the samples had an average of physical water quality parameters that were within the range accepted by the World Health Organization (WHO) for surface waters with exemption of turbidity which was above the recommended 5 NTU as recorded from some sampling sites. Continuous and long-term surveillance of the lake water to accurately monitor the contaminants and possible correlation between chemical, physical, and biological characteristics is recommended. This would be important in continuous understanding of the hydrological characteristics changes of the lake for proper management of its quality with reference to the WHO standards. A multiple varied-sampling approach in different geographical regions during different seasons is recommended to establish the geographical distribution and relatedness to seasonal distribution patterns of the viruses. The data generated from this study will be useful in providing a basis for assessment of seasonally driven fecal pollution load of the lake and enteric virus contamination for proper management of the sanitary situation around the lake.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1155/2020/9062041","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38186129","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Molecular Characterization of Norovirus Strains Isolated from Older Children and Adults in Impoverished Communities of Vhembe District, South Africa. 南非Vhembe地区贫困社区大龄儿童和成人诺如病毒分离株的分子特征
IF 2.2
Advances in Virology Pub Date : 2020-06-29 eCollection Date: 2020-01-01 DOI: 10.1155/2020/8436951
G Mulondo, R Khumela, J P Kabue, A N Traore, N Potgieter
{"title":"Molecular Characterization of Norovirus Strains Isolated from Older Children and Adults in Impoverished Communities of Vhembe District, South Africa.","authors":"G Mulondo,&nbsp;R Khumela,&nbsp;J P Kabue,&nbsp;A N Traore,&nbsp;N Potgieter","doi":"10.1155/2020/8436951","DOIUrl":"https://doi.org/10.1155/2020/8436951","url":null,"abstract":"<p><strong>Background: </strong>Human norovirus (NoV) is an etiological agent associated with acute gastroenteritis (AGE) in both children and adults worldwide. However, very few studies have been reported on the prevalence and genetic diversity of NoV strains in children older than 5 years of age and adults with little or inadequate water and sanitation conditions.</p><p><strong>Objectives: </strong>The aim of this study was assessing the prevalence of the human norovirus in older children and adults suffering with diarrhoea from rural communities in the Vhembe district, Limpopo province.</p><p><strong>Methods: </strong>Between August 2017 and October 2018, stool samples were collected from outpatients suffering from AGE and screened for NoV strains using the RIDA©GENE norovirus I and II real-time one-step RT-PCR. RNA extracts of NoV-positive samples were subjected to RT-PCR amplification and nucleotide sequencing to genotype the positive NoV strains.</p><p><strong>Results: </strong>Out of 80 collected stool samples, 13 (16%) were tested positive for norovirus. Genogroup GII was identified in 6/13 (46%) samples and genogroup GI in 7/13 (54%) samples. The sequence analyses showed multiple genotypes including GII.Pg, GII.1, GII.2, GII.4, and GI.3. Phylogenetic analysis revealed the relatedness of NoV genotypes identified with other strains reported globally.</p><p><strong>Conclusion: </strong>Continued systematic surveillance to evaluate norovirus association with diarrhoea is needed to assist with epidemiological surveillance and disease burden in people of all the age groups.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-06-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1155/2020/8436951","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38176955","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Dysregulation in Plasma ω3 Fatty Acids Concentration and Serum Zinc in Heavy Alcohol-Drinking HCV Patients. 重度饮酒HCV患者血浆ω3脂肪酸浓度和血清锌的失调。
IF 2.2
Advances in Virology Pub Date : 2020-06-09 eCollection Date: 2020-01-01 DOI: 10.1155/2020/7835875
Vatsalya Vatsalya, Ruchita Agrawal, Jane Frimodig, Shweta Srivastava, Melanie L Schwandt
{"title":"Dysregulation in Plasma <i>ω</i>3 Fatty Acids Concentration and Serum Zinc in Heavy Alcohol-Drinking HCV Patients.","authors":"Vatsalya Vatsalya,&nbsp;Ruchita Agrawal,&nbsp;Jane Frimodig,&nbsp;Shweta Srivastava,&nbsp;Melanie L Schwandt","doi":"10.1155/2020/7835875","DOIUrl":"https://doi.org/10.1155/2020/7835875","url":null,"abstract":"<p><p>Alcohol use disorder (AUD) patients comorbid with hepatitis C virus (HCV) infection (HCV + AUD) could have progressively severe clinical sequels of liver injury and inflammation. Serum zinc and several polyunsaturated fatty acids (PUFAs) get dysregulated in AUD as well as HCV. However, the extent of dysregulation of PUFAs and zinc deficiency and their interaction in HCV + AUD as a comorbid pathology has not been studied. We examined the role of dysregulation of FAs and low zinc in HCV + AUD patients. 138 male and female participants aged 21-67 years were grouped as HCV-only (Gr. 1; <i>n</i> = 13), HCV + AUD (Gr. 2; <i>n</i> = 25), AUD without liver injury (Gr. 3; <i>n</i> = 37), AUD with liver injury (Gr. 4; <i>n</i> = 51), and healthy volunteers (Gr. 5 or HV; <i>n</i> = 12). Drinking history, individual demographic measures, fasting fatty acids, liver function, and zinc were measured and analyzed. HCV + AUD patients showed the highest ALT level compared to the rest of the groups. Serum zinc concentrations were the lowest, and the proinflammatory shift was the highest (characterized by <i>ω</i>6 : <i>ω</i>3 ratio) in the HCV + AUD patients. Total <i>ω</i>3, eicosapentaenoic acid (EPA), and docosapentaenoic acid (DPA5,3) were the lowest in HCV + AUD patients. Total <i>ω</i>3, <i>α</i>-linoleic acid (<i>α</i>-LA) along with covariable number of drinking days past 90 days (NDD90), eicosapentaenoic acid (EPA), and docosapentaenoic acid (DPA5,3) independently showed significant association with low zinc in the HCV + AUD patients. Heavy drinking pattern showed that NDD90 has a significant mediating role in the representation of the relationship between candidate <i>ω</i>3 PUFAs and zinc uniquely in the HCV + AUD patients. Low serum zinc showed a distinctively stronger association with total and candidate <i>ω</i>3s in the HCV + AUD patients compared to the patients with HCV or AUD alone, supporting dual mechanism involved in the exacerbation of the proinflammatory response in this comorbid cohort. This trial is registered with NCT#00001673.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1155/2020/7835875","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38067765","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Molecular Diagnosis of Pneumonia Using Multiplex Real-Time PCR Assay RespiFinder® SMART 22 FAST in a Group of Moroccan Infants. 在一组摩洛哥婴儿中使用多重实时荧光定量PCR检测RespiFinder®SMART 22 FAST进行肺炎的分子诊断
IF 2.2
Advances in Virology Pub Date : 2020-02-18 eCollection Date: 2020-01-01 DOI: 10.1155/2020/6212643
Kenza Hattoufi, Houssain Tligui, Majdouline Obtel, Sobha El Ftouh, Aicha Kharbach, Amina Barkat
{"title":"Molecular Diagnosis of Pneumonia Using Multiplex Real-Time PCR Assay RespiFinder® SMART 22 FAST in a Group of Moroccan Infants.","authors":"Kenza Hattoufi,&nbsp;Houssain Tligui,&nbsp;Majdouline Obtel,&nbsp;Sobha El Ftouh,&nbsp;Aicha Kharbach,&nbsp;Amina Barkat","doi":"10.1155/2020/6212643","DOIUrl":"https://doi.org/10.1155/2020/6212643","url":null,"abstract":"<p><strong>Background: </strong>In Morocco, pediatric pneumonia remains a serious public health problem, as it constitutes the first cause of mortality due to infectious diseases. The etiological diagnosis of acute respiratory tract infections is difficult. Therefore, it is necessary to use Multiplex real-time polymerase chain reaction assay tests in a routine setting for exact and fast identification.</p><p><strong>Objectives: </strong>In this paper, we present the clinical results of pediatric pneumonia and describe their etiology by using molecular diagnosis. <i>Study design</i>: Tracheal secretion was collected from infants presenting respiratory distress isolated or associated with systemic signs, attending the unit of Neonatology between December 1, 2016, and Mai 31, 2018. Samples were tested with the multiplex RespiFinder® SMART 22 FAST which potentially detects 18 viruses and 4 bacteria.</p><p><strong>Results: </strong>Of the 86 infants considered in this study (mean age 31 ± 19 days) suspected of acute respiratory tract infections, 71 (83%) were positive for one or multiple viruses or/and bacteria. The majority of acute respiratory tract infections had a viral origin (95%): respiratory syncytial viruses (A and B) (49%), rhinovirus (21%), coronaviruses 229E (11%), humain metapneumovirus (5%), influenza A (3%), influenza H1N1 (1%), adenovirus (2%), and parainfluenza virus type 4 (2%). Among our patients, 6% had <i>Mycoplasma pneumoniae</i>. Coinfections were not associated with severe respiratory symptoms.</p><p><strong>Conclusion: </strong>The clinical spectrum of respiratory infections is complex and often nonspecific. Thus, the early and fast detection of related causative agents is crucial. The use of multiplex real time polymerase chain reaction may help choose an accurate treatment, reduce the overall use of unnecessary antibiotics, preserve intestinal flora, and decrease nosocomial infection by reducing the length of hospitalization.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-02-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1155/2020/6212643","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37716726","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Inhibitory Activity of Illicium verum Extracts against Avian Viruses. 八角提取物对禽流感病毒的抑制活性研究。
IF 2.2
Advances in Virology Pub Date : 2020-01-25 eCollection Date: 2020-01-01 DOI: 10.1155/2020/4594635
Mohammed S Alhajj, Mahmood A Qasem, Saud I Al-Mufarrej
{"title":"Inhibitory Activity of <i>Illicium verum</i> Extracts against Avian Viruses.","authors":"Mohammed S Alhajj,&nbsp;Mahmood A Qasem,&nbsp;Saud I Al-Mufarrej","doi":"10.1155/2020/4594635","DOIUrl":"https://doi.org/10.1155/2020/4594635","url":null,"abstract":"<p><p>This study aimed at screening the inhibitory activity of <i>Illicium verum</i> extracts against avian reovirus, infectious bursal disease virus (IBDV), Newcastle disease virus (NDV), and infectious laryngotracheitis virus (ILTV). The cytotoxic and antiviral actions of 3 extracts, absolute methanol (100MOH), 50% methanol (50MOH), and aqueous extracts (WA.), were evaluated by MTT assay. The <i>Illicium verum</i> extracts were added to the cultured chick embryo fibroblast (CEF) with tested viruses in three attacks, preinoculation, postinoculation, and simultaneous inoculation. The three extracts showed antiviral inhibitory activity against all tested viruses during simultaneous inoculation and preinoculation except 100MOH and 50MOH that showed no effect against IBDV, thereby suggesting that the extracts have a preventive effect on CEF against viruses. During postinoculation, the extracts exhibited inhibitory effects against NDV and avian reovirus, while no effect against IBDV recorded and only the 100MOH showed an inhibitory effect against ILTV. The initial results of this study suggest that <i>Illicium verum</i> may be a candidate for a natural alternative source for antiviral agents.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-01-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1155/2020/4594635","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37939655","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Comparison of the Immunogenicity and Safety of Two Pediatric TBE Vaccines Based on the Far Eastern and European Virus Subtypes. 基于远东和欧洲病毒亚型的两种小儿结核菌素疫苗的免疫原性和安全性比较。
IF 2.2
Advances in Virology Pub Date : 2019-12-24 eCollection Date: 2019-01-01 DOI: 10.1155/2019/5323428
Mikhail F Vorovitch, Galina B Maikova, Liubov L Chernokhaeva, Victor V Romanenko, Galina G Karganova, Aydar A Ishmukhametov
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