O. Sager, F. Dinçoğlan, S. Demiral, H. Gamsız, B. Uysal, F. Ozcan, O. Çolak, B. Dirican, M. Beyzadeoğlu
{"title":"Evaluation of the Impact of Magnetic Resonance Imaging (MRI) on Gross Tumor Volume (GTV) Definition for Radiation Treatment Planning (RTP) of Inoperable High Grade Gliomas (HGGs)","authors":"O. Sager, F. Dinçoğlan, S. Demiral, H. Gamsız, B. Uysal, F. Ozcan, O. Çolak, B. Dirican, M. Beyzadeoğlu","doi":"10.1155/2019/4282754","DOIUrl":"https://doi.org/10.1155/2019/4282754","url":null,"abstract":"Aim and Background. Inoperable high-grade gliomas (HGGs) comprise a specific group of brain tumors portending a very poor prognosis. In the absence of surgical management, radiation therapy (RT) offers the primary local treatment modality for inoperable HGGs. Optimal target definition for radiation treatment planning (RTP) of HGGs is a difficult task given the diffusely infiltrative nature of the disease. In this context, detailed multimodality imaging information may add to the accuracy of target definition in HGGs. We evaluated the impact of Magnetic Resonance Imaging (MRI) on Gross Tumor Volume (GTV) definition for RTP of inoperable HGGs in this study. Materials and Methods. Twenty-five inoperable patients with a clinical diagnosis of HGG were included in the study. GTV definition was based on Computed Tomography- (CT-) simulation images only or both CT-simulation and MR images, and a comparative assessment was performed to investigate the incorporation of MRI into RTP of HGGs. Results. Median volume of GTV acquired by using CT-simulation images only and by use of CT and MR images was 65.3 (39.6-94.3) cc and 76.1 (46.8-108.9) cc, respectively. Incorporation of MRI into GTV definition has resulted in a median increase of 12.61% (6%-19%) in the volume of GTV defined by using the CT-simulation images only, which was statistically significant (p < 0.05). Conclusion. Incorporation of MRI into RTP of inoperable HGGs may improve GTV definition and may have implications for dose escalation/intensification strategies despite the need for further supporting evidence.","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"8 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74846868","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Y. A. Costa, Carlos Andre Braile Przewodowski Filho, G. Flores, E. Rodrigues, F. F. Paiva
{"title":"Full-Range Liver Fat Fraction Estimation in Magnitude MRI Using a Signal Shape Descriptor","authors":"Y. A. Costa, Carlos Andre Braile Przewodowski Filho, G. Flores, E. Rodrigues, F. F. Paiva","doi":"10.1155/2019/3439468","DOIUrl":"https://doi.org/10.1155/2019/3439468","url":null,"abstract":"Current methods for estimation of proton density fat fraction (PDFF) of the liver using magnitude magnetic resonance (MR) imaging face the challenge of correctly estimating it when fat is the dominant molecule; i.e., PDFF is more than 50%. Therefore, the accuracy of the methods is limited to half-range operation. We introduce a method based on neural networks for regression capable of estimating over the full range of fat fractions. We built a neural network based on the angles and distances between the data in the discrete MR signal (ADALIFE), using these as features associated with different PDFFs and as input for the network. Tests were performed using ADALIFE and Multi-interference, a state-of-the-art method to estimate PDFFs, with simulated signals at various signal-to-noise (SNR) values. Results were compared in order to verify repeatability and agreement using Bland-Altman and REC curves. Results for Multi-interference were similar to its in vivo literature, showing the relevance of a simulation. ADALIFE was able to correctly estimate fat fractions up to 100%, breaking the current paradigm for full-range estimation using only offline postprocessing. Within half range, our method outperformed Multi-interference in repeatability and agreement, with narrower limits of agreement and lower expected error at any SNR.","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"75 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-07-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"72679826","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
E. Walsh, Marnie E. Shaw, D. Oyarce, M. Fraser, N. Cherbuin
{"title":"Assumption-Free Assessment of Corpus Callosum Shape: Benchmarking and Application","authors":"E. Walsh, Marnie E. Shaw, D. Oyarce, M. Fraser, N. Cherbuin","doi":"10.1155/2019/8921901","DOIUrl":"https://doi.org/10.1155/2019/8921901","url":null,"abstract":"Shape analysis provides a unique insight into biological processes. This paper evaluates the properties, performance, and utility of elliptical Fourier (eFourier) analysis to operationalise global shape, focussing on the human corpus callosum. 8000 simulated corpus callosum contours were generated, systematically varying in terms of global shape (midbody arch, splenium size), local complexity (surface smoothness), and nonshape characteristics (e.g., rotation). 2088 real corpus callosum contours were manually traced from the PATH study. Performance of eFourier was benchmarked in terms of its capacity to capture and then reconstruct shape and systematically operationalise that shape via principal components analysis. We also compared the predictive performance of corpus callosum volume, position in Procrustes-aligned Landmark tangent space, and position in eFourier n-dimensional shape space in relation to the Symbol Digit Modalities Test. Jaccard index for original vs. reconstructed from eFourier shapes was excellent (M=0.98). The combination of eFourier and PCA performed particularly well in reconstructing known n-dimensional shape space but was disrupted by the inclusion of local shape manipulations. For the case study, volume, eFourier, and landmark measures were all correlated. Mixed effect model results indicated all methods detected similar features, but eFourier estimates were most predictive, and of the two shape operationalization techniques had the least error and better model fit. Elliptical Fourier analysis, particularly in combination with principal component analysis, is a powerful, assumption-free and intuitive method of quantifying global shape of the corpus callosum and shows great promise for shape analysis in neuroimaging more broadly.","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"73 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"77312593","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
J. Steinbacher, M. McCoy, F. Klausner, W. Wallner, A. Oellerer, L. Machegger
{"title":"Do Patients with Implants Experience Strong Sensations That Lead to Early Termination of MRI Examinations?","authors":"J. Steinbacher, M. McCoy, F. Klausner, W. Wallner, A. Oellerer, L. Machegger","doi":"10.1155/2019/9542085","DOIUrl":"https://doi.org/10.1155/2019/9542085","url":null,"abstract":"Purpose. Many patients with metallic implants are aware of the potential dangers in an MRI environment. Some implants cause sensations perceptible by the patient during an MRI scan. We wanted to find out if patients having an implant abort MRI scans more often than patients without implants. Furthermore, we wanted to know if the number of implants of a patient has an influence on the number of aborted MRI scans. As we use 3T MRI scanners from different manufacturers we wanted to see the influence of the “ScanWise” software option where scan parameters are adapted automatically to the maximal allowed limits of implant values. This publication should help to reduce possible anxiety in patients with implants. Materials and Methods. From May 15th 2017 until July 17th 2018 the implant type of patients was recorded. We looked how often aborted MRI scans coincided with the occurrence of implants and the MRI scanner type used. Results. 4088 examinations were collected for the analysis. No influence of implants on aborted MRI scans was registered. No influence of the number of implants on aborted MRI scans was registered. No influence of the use of “ScanWise” software on aborted MRI scans was registered when different scanners were compared. Conclusion. “MR Safe” or “MR Conditional” labelled implants did not have an impact on the MRI examinations. “ScanWise” software does not affect how MRI examinations are tolerated.","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"120 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"77422098","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jean-Philippe Dillenseger, C. Goetz, Amira Sayeh, P. Zorn, S. Kremer, Y. Rémond, A. Constantinesco, Gaëlle Aubertin-Kirch, P. Choquet
{"title":"Is Subcutaneous Route an Alternative to Intravenous Route for Mouse Contrast-Enhanced Magnetic Resonance Imaging at 1.5 T?","authors":"Jean-Philippe Dillenseger, C. Goetz, Amira Sayeh, P. Zorn, S. Kremer, Y. Rémond, A. Constantinesco, Gaëlle Aubertin-Kirch, P. Choquet","doi":"10.1155/2019/7428904","DOIUrl":"https://doi.org/10.1155/2019/7428904","url":null,"abstract":"The present work compares intravenous (IV) and subcutaneous (SC) routes for contrast-enhanced MRI (CE-MRI) in mice. For that purpose, we selected two contrast media used in clinical practice. MRI acquisitions were performed at 1.5 T on five adult mice (Swiss, 41 g +/- 3 g). On each animal, four acquisitions were achieved with IV and SC administration of either Gd-DOTA or MS-325 (1 acquisition per week). For each route, 0.1 mL of NaCl and 0.1 mL of contrast agent were injected. For each acquisition, 200 T1-weighted images were acquired in a 2 h 34 min time lapse. For each route and contrast medium, dynamic contrast enhancement (DCE) curves were obtained. Time-to-peak (TTP), uptake, and washout constant-time values and contrast-to-noise ratio (CNR) were extracted. IV route TTP value was 4.9 min with Gd-DOTA and 5.4 min with MS-325. SC route TTP was 43.3 min with Gd-DOTA and 45.0 min with MS-325. Despite slower uptake constant-time, we show that SC is a potentially valuable alternative to the IV route in mouse preclinical CE-MRI.","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"29 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-06-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"90928066","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Quick Reduction of Specific Absorption Rate Constraints in Parallel RF Excitation Pulse Design by Maximum Volume Inscribed Ellipsoids","authors":"K. Majewski","doi":"10.1155/2019/7369845","DOIUrl":"https://doi.org/10.1155/2019/7369845","url":null,"abstract":"In medical magnetic resonance imaging, parallel radio frequency excitation pulses have to respect a large number of specific absorption rate constraints. Geometrically, each of these constraints can be interpreted as a complex, centered ellipsoid. We propose to replace a collection of such constraints by the single constraint which corresponds to the associated maximum volume inscribed ellipsoid and implies all original constraints. We describe how to compute this ellipsoid via convex programming. Examples show that this reduction has very short computation times but cuts away parts of the feasible power domain.","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"77 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-06-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"80788125","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The Value of Intravoxel Incoherent Motion (IVIM) Magnetic Resonance Imaging in the Evaluation of the Osteosarcoma Response to Preoperative Neoadjuvant Chemotherapy in Teens","authors":"Hou-dong Zuo","doi":"10.1155/2019/2918763","DOIUrl":"https://doi.org/10.1155/2019/2918763","url":null,"abstract":"Purpose. To investigate the value of intravoxel incoherent motion (IVIM) magnetic resonance imaging in the evaluation of the osteosarcoma (OS) response to preoperative neoadjuvant chemotherapy (NAC) in teens. Methods. Eighteen consecutive osteosarcoma patients (12 males and 6 females) diagnosed by histopathology were enrolled. All enrolled patients received NAC and underwent MRI examinations before and after 2 cycles of NAC. The volume (V), apparent diffusion coefficient (ADC), (slow) diffusion coefficient (D), pseudo-perfusion (fast) diffusion coefficient (D⁎or D star), and perfusion fractions (f) of the OS before and after NAC were measured and analysed. The sensitivity and the specificity of the ADC, D, D⁎ and f values and the correlation between changes in volume (ΔV) and the IVIM-derived parameters (ΔADC, ΔD, ΔD⁎ and Δf) were also calculated and analysed. Paired Student’s t-tests, receiver operating characteristic (ROC) curves, and Spearman correlation analyses were used. Results. The mean volume of the OS after NAC decreased significantly (61.55±9.3 cm3 vs 40.26±4.1 cm3) (P<0.05). After NAC, the ADC (1.21±0.09 × 10-3 mm2/s vs 1.73±0.11 × 10-3 mm2/s) and D (1.14±0.09 × 10-3 mm2/s vs 1.63±0.1 × 10-3 mm2/s) values increased and f (28.58±1.37% vs 20.93±1.16%) values decreased significantly (P<0.05), while D⁎ (9.17±0.98 × 10-3 mm2/s vs 8.94±0.13 × 10-3 mm2/s) values changed slightly (P>0.05). The AUC values of ADC (0.938) and D (0.943) were higher than those of D⁎ (0.574) and f (0.765). The sensitivity and specificity of ADC (0.778, 1) and D (0.944, 0.833) values were superior to those of D⁎ (0.278, 0.722) and f (0.5, 0.944) values. No significant correlations were found between the ΔV and ΔADC, ΔD, ΔD⁎ and Δf values (P>0.05). Conclusion. IVIM-derived parameters ADC and D have the potential to be imaging biomarkers for evaluation of the therapeutic response to NAC in OS patients.","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"22 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-05-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83393984","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Dj Wijesekera, Timothy Stait-Gardner, Abhishek Gupta, Johnny Chen, Gang Zheng, Allan M. Torres, William S. Price
{"title":"A complete derivation of the Kärger equations for analyzing NMR diffusion measurements of exchanging systems","authors":"Dj Wijesekera, Timothy Stait-Gardner, Abhishek Gupta, Johnny Chen, Gang Zheng, Allan M. Torres, William S. Price","doi":"10.1002/cmr.a.21468","DOIUrl":"10.1002/cmr.a.21468","url":null,"abstract":"<p>The use of NMR methods to quantitatively determine association/dissociation constants in biological and chemical systems (eg, drug binding/protein–ligand interactions) is long established. Among these, NMR diffusion-based techniques are increasingly prominent. In this article, the Kärger equations, used for analyzing NMR diffusion-based measurements of exchange, are derived from first principles and then solved in detail for the case of a two-site freely diffusing system under simplifying assumptions that the chemical shift and the relaxation in both sites are the same. Care is taken to clarify the connections between the experimental variables and the parameters of the Kärger equations.</p>","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"47A 2","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-04-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/cmr.a.21468","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87159926","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Aging of polymeric materials by stray-field NMR relaxometry with the NMR-MOUSE","authors":"Bernhard Blümich","doi":"10.1002/cmr.a.21464","DOIUrl":"10.1002/cmr.a.21464","url":null,"abstract":"<p>The sensitivity of NMR relaxation to molecular motion is explored to study the aging of polymer materials and paint binder in master paintings. Polymeric materials are formulated from macromolecules with a distribution of molecular weights and low molecular weight additives. Their physical and chemical properties change with time due to exposure to temperature, mechanical stress, and solvents. These conditions lead to physical and chemical aging, which can proceed naturally over longer times or accelerated under artificial conditions in shorter times. Either procedure bears a particular signature on the molecular mobility, which can be probed nondestructively by the NMR relaxation times <i>T</i><sub>1</sub> and <i>T</i><sub>2</sub>. Natural aging and accelerated temperature- and solvent-induced aging are summarized for synthetic polymer materials and compared to aging of binders in the paint layers of paintings aged naturally over hundreds of years and aged artificially by solvent-cleaning procedures during restoration or at elevated temperature during forgery.</p>","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"47A 2","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-04-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/cmr.a.21464","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74999343","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A summary of the career of Daniel D. Traficante","authors":"David Rovnyak","doi":"10.1002/cmr.a.21476","DOIUrl":"10.1002/cmr.a.21476","url":null,"abstract":"","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"47A 2","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-04-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/cmr.a.21476","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81416164","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}