International Journal for Numerical Methods in Biomedical Engineering最新文献

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An Efficient Staggered Scheme for Solving the Poromechanics Problem of Quasi-Static Cardiac Perfusion 解决准静态心脏灌注孔力学问题的高效交错方案
IF 2.2 4区 医学
International Journal for Numerical Methods in Biomedical Engineering Pub Date : 2025-04-10 DOI: 10.1002/cnm.70030
Xuan Wang, Li Cai, Pengfei Ma, Hao Gao
{"title":"An Efficient Staggered Scheme for Solving the Poromechanics Problem of Quasi-Static Cardiac Perfusion","authors":"Xuan Wang,&nbsp;Li Cai,&nbsp;Pengfei Ma,&nbsp;Hao Gao","doi":"10.1002/cnm.70030","DOIUrl":"https://doi.org/10.1002/cnm.70030","url":null,"abstract":"<div>\u0000 \u0000 <p>The ventricles can be considered a type of poroelastic material, where the mass and pressure of the interstitial fluid, along with the displacement of the skeleton, are the three primary physical quantities of interest. Based on the free energy function of the poroelastic material, we propose a simplified model that requires only two fields to be directly solved, with another quantity obtained through post-processing. To solve this model, we first discretize the equations with the backward Euler scheme and finite element method, leading to a nonlinear system of equations, which can be solved using the Newton method in a monolithic way. For computational efficiency, we proposed a staggered scheme, where the large nonlinear system is divided into two smaller independent systems, and each only solves for one field using the Newton method. The numerical results showed the staggered scheme is more efficient than the monolithic scheme and that the two schemes achieve the same results, and are also in good agreement with those reported in the literature. Finally, we applied the staggered scheme to ventricular myocardial perfusion models and obtained the blood perfusion patterns in the myocardium during the cardiac systole.</p>\u0000 </div>","PeriodicalId":50349,"journal":{"name":"International Journal for Numerical Methods in Biomedical Engineering","volume":"41 4","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-04-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143818671","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A Neural Network Finite Element Trileaflet Heart Valve Model Incorporating Multi-Body Contact 包含多体接触的神经网络有限元三叶心脏瓣膜模型
IF 2.2 4区 医学
International Journal for Numerical Methods in Biomedical Engineering Pub Date : 2025-04-10 DOI: 10.1002/cnm.70038
Kenneth Meyer, Christian Goodbrake, Michael S. Sacks
{"title":"A Neural Network Finite Element Trileaflet Heart Valve Model Incorporating Multi-Body Contact","authors":"Kenneth Meyer,&nbsp;Christian Goodbrake,&nbsp;Michael S. Sacks","doi":"10.1002/cnm.70038","DOIUrl":"https://doi.org/10.1002/cnm.70038","url":null,"abstract":"&lt;div&gt;\u0000 \u0000 &lt;p&gt;The use of patient-specific computational modeling of cardiovascular diseases has become increasingly popular to improve patient standard of care. Most simulation approaches currently utilize the finite element method (FEM), which is very well established and succeeds in producing high-fidelity results. However, it remains too slow for use in clinical settings, especially when many-query solutions are required to determine optimal therapeutic approaches. As a step toward addressing these demands, we have developed a Neural Network Finite Element (NNFE) approach that greatly accelerates simulations of soft tissue organ function. While the NNFE method utilizes conventional FEM meshes to define the problem geometry, it leverages advancements in neural network architecture design in new GPU-based software tools to solve the governing hyperelastic material PDEs. The NNFE method has recently captured physical contact between a deformable body and a frictionless symmetry plane. In the present work, we extended the NNFE approach to simulate trileaflet heart valve closure as a critical step in moving toward patient-specific applications. Our approach addressed two critical aspects of heart valve simulations: the use of 3D solid leaflet models as opposed to shell-based leaflet models and multi-body contact between the leaflets. We verified the approach by comparing displacements of NNFE simulated closure of a single heart valve leaflet against a frictionless symmetry plane with an identical simulation in tIGAr, the open-source isogeometric analysis extension of FEniCS. The average nodal displacement error was 0.020 mm (0.47% of the maximum displacement). We further evaluated our implementation by varying leaflet collagen fiber directions to mimic physiologically accurate deformation modes. Results of the approach indicated that the observed leaflet deformation patterns agreed well with previous trileaflet simulations. Significant variations in stress were observed transmurally, underscoring the need for solid elements to model leaflet geometry. Computational speed improvements produced an approximately 100-fold speedup, with the NNFE simulations of single leaflet closure taking 0.28 s while its FE counterpart took 61 s. Full trileaflet valve models with multi-body contact simulations took approximately 5 s, whereas equivalent FEM simulations take several hours. Training the full trileaflet model took approximately 16 h and was trained over the full functional range of pressure, so that training was only required once for all subsequent simulations. We conclude that the NNFE method can be successfully used to perform rapid simulations of complex 3D soft organ systems, such as the trileaflet heart valve, that involve large deformations, 3D geometries, and multi-body contact. Moreover, the ability to perform post-trained simulations in dramatically shorter time periods underscores the promise of machine learning-based computational","PeriodicalId":50349,"journal":{"name":"International Journal for Numerical Methods in Biomedical Engineering","volume":"41 4","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-04-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143818672","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effect of Arterial Blood Flow on Magnetic Nanoparticle Thermotherapy Applied on a Realistic Breast Tumor Model 动脉血流对应用于真实乳腺肿瘤模型的磁性纳米粒子热疗法的影响
IF 2.2 4区 医学
International Journal for Numerical Methods in Biomedical Engineering Pub Date : 2025-04-10 DOI: 10.1002/cnm.70039
Sandeep Nain, Neeraj Kumar, Pramod Kumar Avti
{"title":"Effect of Arterial Blood Flow on Magnetic Nanoparticle Thermotherapy Applied on a Realistic Breast Tumor Model","authors":"Sandeep Nain,&nbsp;Neeraj Kumar,&nbsp;Pramod Kumar Avti","doi":"10.1002/cnm.70039","DOIUrl":"https://doi.org/10.1002/cnm.70039","url":null,"abstract":"&lt;div&gt;\u0000 \u0000 &lt;p&gt;The current investigation aims to determine the effects of blood flow through the artery system engulfed in the tumor region, exposed to localized heating during magnetic nanoparticle hyperthermia (MNPH). The MNPH simulations are performed on a physical breast model constructed from MRI images of a female patient with a breast tumor. The DCE_MRI DICOM images of breast cancer from The Cancer Imaging Archive (TCIA) of a patient are utilized to build realistic breast models using 3D slicer software. The visible blood artery, tumor, and surrounding healthy tissue were then imported into the COMSOL Multiphysics software to simulate the underlying physics (bioheat transfer and fluid flow) during MNPH treatment. The tumor tissue is infused with a dose of 5, 5.5, and 6 &lt;span&gt;&lt;/span&gt;&lt;math&gt;\u0000 &lt;semantics&gt;\u0000 &lt;mrow&gt;\u0000 &lt;mi&gt;mg&lt;/mi&gt;\u0000 &lt;mo&gt;/&lt;/mo&gt;\u0000 &lt;msup&gt;\u0000 &lt;mi&gt;cm&lt;/mi&gt;\u0000 &lt;mn&gt;3&lt;/mn&gt;\u0000 &lt;/msup&gt;\u0000 &lt;/mrow&gt;\u0000 &lt;annotation&gt;$$ mathrm{mg}/{mathrm{cm}}^3 $$&lt;/annotation&gt;\u0000 &lt;/semantics&gt;&lt;/math&gt;(tumor volume) of magnetic nanoparticles (MNPs) using a multi-point injection strategy. The range of magnetic field applied during MNPH simulations are 12, 13, and 14 &lt;span&gt;&lt;/span&gt;&lt;math&gt;\u0000 &lt;semantics&gt;\u0000 &lt;mrow&gt;\u0000 &lt;mi&gt;kA&lt;/mi&gt;\u0000 &lt;mo&gt;/&lt;/mo&gt;\u0000 &lt;mi&gt;m&lt;/mi&gt;\u0000 &lt;/mrow&gt;\u0000 &lt;annotation&gt;$$ mathrm{kA}/mathrm{m} $$&lt;/annotation&gt;\u0000 &lt;/semantics&gt;&lt;/math&gt; at a field frequency of 330 &lt;span&gt;&lt;/span&gt;&lt;math&gt;\u0000 &lt;semantics&gt;\u0000 &lt;mrow&gt;\u0000 &lt;mi&gt;kHz&lt;/mi&gt;\u0000 &lt;/mrow&gt;\u0000 &lt;annotation&gt;$$ mathrm{kHz} $$&lt;/annotation&gt;\u0000 &lt;/semantics&gt;&lt;/math&gt;. The Arrhenius thermal damage model is applied to evaluate the cell damage to the breast model. Two blood flow conditions, that is, with the flow and without the flow of blood through the artery, are applied to measure the effects of blood flow through the artery in the MNPH procedure. Additionally, tumor damage at different MNP doses and magnetic field conditions have also been observed under different arterial blood flow conditions. Results show that the arterial blood flow carries a significant amount of heat with it during MNPH. This minimizes the heat damage inflicted on tumor tissue during hyperthermia treatment. The presence of arterial blood flow in the partially submerged artery in the tumor site resulted in around a 25% reduction in thermal damage to the tumor tissue. However, the tumor damage can be enhanced by increasing the nanoparticle dose and magnetic field parameters. Enhancing the MNP dose and magnetic field parameters increases the thermal damage to the tumor tissue; however, this may also lead to more healthy tissue damage. The therapeutic benefits of MNPH are significantly impacted by the vasculature in and around","PeriodicalId":50349,"journal":{"name":"International Journal for Numerical Methods in Biomedical Engineering","volume":"41 4","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-04-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143818673","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Hemodynamics in Cerebral Aneurysms and Parent Arteries With Incompletely Expanded Flow Diverter Stents
IF 2.2 4区 医学
International Journal for Numerical Methods in Biomedical Engineering Pub Date : 2025-03-31 DOI: 10.1002/cnm.70033
Soichiro Fujimura, Kazuya Yuzawa, Katharina Otani, Kostadin Karagiozov, Hiroyuki Takao, Toshihiro Ishibashi, Koji Fukudome, Makoto Yamamoto, Yuichi Murayama
{"title":"Hemodynamics in Cerebral Aneurysms and Parent Arteries With Incompletely Expanded Flow Diverter Stents","authors":"Soichiro Fujimura,&nbsp;Kazuya Yuzawa,&nbsp;Katharina Otani,&nbsp;Kostadin Karagiozov,&nbsp;Hiroyuki Takao,&nbsp;Toshihiro Ishibashi,&nbsp;Koji Fukudome,&nbsp;Makoto Yamamoto,&nbsp;Yuichi Murayama","doi":"10.1002/cnm.70033","DOIUrl":"https://doi.org/10.1002/cnm.70033","url":null,"abstract":"<p>Braided stents for cerebral aneurysms, including flow diverter stent (FDS), may exhibit incomplete stent expansion (IncompSE) during deployment, depending on factors related to the parent artery. Poor stent apposition due to IncompSE can increase the risk of complications or incomplete aneurysm occlusion. Since hemodynamics may play a critical role in these adverse events, we investigated hemodynamic parameters associated with IncompSE using computational fluid dynamics (CFD) analysis. Three basic geometries were generated to represent an aneurysm located on the siphon of the internal carotid artery. CFD analysis was conducted for each geometry under a total of 12 patterns, including before deployment, complete stent expansion (CompSE), and IncompSE on the distal and proximal sides. We focused on hemodynamic parameters reported to influence occlusion or complications after FDS deployment. The change rate (CR) of these parameters was calculated by comparing conditions before and after FDS deployment. In the cases of CompSE, volume flow (VF) into the aneurysm and maximum wall shear stress (WSS) on the aneurysmal wall decreased on average by 52.7% and 34.7%, respectively. Conversely, in the cases of IncompSE, higher VF, inflow jets, and vortices were observed within the aneurysm. Increased WSS at the aneurysmal neck and parent artery was also noted. While static pressure on the aneurysmal wall and energy loss through the aneurysm region showed minimal change in the case of CompSE, both parameters increased in cases of IncompSE. These findings suggest that IncompSE may result in hemodynamic conditions that are suboptimal for treatment. IncompSE of FDS can potentially induce unfavorable hemodynamic changes, including increased blood flow into the aneurysm and elevated pressure on the aneurysmal wall compared to pre-deployment conditions.</p>","PeriodicalId":50349,"journal":{"name":"International Journal for Numerical Methods in Biomedical Engineering","volume":"41 4","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-03-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cnm.70033","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143741488","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Numerical Assessment of the Efficiency of a New Minimally Invasive Probe for the Isolation of Circulating Tumor Cells 对用于分离循环肿瘤细胞的新型微创探针效率的数值评估
IF 2.2 4区 医学
International Journal for Numerical Methods in Biomedical Engineering Pub Date : 2025-03-25 DOI: 10.1002/cnm.70032
Felix Hehnen, Henri Wolff, Sophia Krakowski, Gabi Bondzio, Michael Lommel, Ulrich Kertzscher, Paul Friedrich Geus
{"title":"Numerical Assessment of the Efficiency of a New Minimally Invasive Probe for the Isolation of Circulating Tumor Cells","authors":"Felix Hehnen,&nbsp;Henri Wolff,&nbsp;Sophia Krakowski,&nbsp;Gabi Bondzio,&nbsp;Michael Lommel,&nbsp;Ulrich Kertzscher,&nbsp;Paul Friedrich Geus","doi":"10.1002/cnm.70032","DOIUrl":"https://doi.org/10.1002/cnm.70032","url":null,"abstract":"<p>Liquid biopsy, particularly the isolation of circulating tumor cells (CTCs) from blood, is a promising approach in the fight against cancer. However, the main reason why CTCs are hardly used as biomarkers in the clinic is their complicated isolation from the patient's blood. Existing ex vivo systems use a small volume of blood and can therefore only isolate very few CTCs. To overcome this problem and increase the number of isolated CTCs, a new in vivo method—the BMProbe was introduced, which can isolate CTCs directly from the patient's bloodstream. This study investigates the efficiency of the BMProbe by using Computational Fluid Dynamics simulations to evaluate parameters influencing the attachment probability of CTCs to the probe surface. The analyzed parameters include screened blood volume, residence time, and wall normal rate. Additionally, the impact of probe geometry, vein diameter, and blood flow velocity on probe efficiency was examined. The numerical data suggest that the geometry has a strong influence on cell binding efficiency. Increasing the number of windings from 4 to 32 improves the transport of cells to the surface (negative wall normal rate) from 0 to −29 [mm<sup>2</sup>/s] and the screened blood volume by 138% but decreases the residence time of particles in the close vicinity of the probe by 77%. When compared to experimental data, the screened blood volume and the wall normal rate indicate cell attachment very well, whereas the residence time does not show a significant impact on the attachment of cells. For the 32-windings BMProbe, the screened blood volume is determined to be 130–313 mL, depending on the vein diameter, which is a multiple of the volume achieved by common CTC isolation techniques.</p>","PeriodicalId":50349,"journal":{"name":"International Journal for Numerical Methods in Biomedical Engineering","volume":"41 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cnm.70032","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143689756","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Machine Learning-Based Rapid Prediction of Torsional Performance of Personalized Peripheral Artery Stent
IF 2.2 4区 医学
International Journal for Numerical Methods in Biomedical Engineering Pub Date : 2025-03-18 DOI: 10.1002/cnm.70029
Xiang Shen, Jiahao Chen, Zewen He, Yue Xu, Qiang Liu, Hongyu Liang, Hengfeng Yan
{"title":"Machine Learning-Based Rapid Prediction of Torsional Performance of Personalized Peripheral Artery Stent","authors":"Xiang Shen,&nbsp;Jiahao Chen,&nbsp;Zewen He,&nbsp;Yue Xu,&nbsp;Qiang Liu,&nbsp;Hongyu Liang,&nbsp;Hengfeng Yan","doi":"10.1002/cnm.70029","DOIUrl":"https://doi.org/10.1002/cnm.70029","url":null,"abstract":"<div>\u0000 \u0000 <p>The complex mechanical environment of peripheral arteries makes stents with poor torsional performance more prone to fracture, and stent fracture is considered a precursor to in-stent restenosis (ISR). Therefore, studying the torsional performance of stents is crucial. However, while the finite element method (FEM) can accurately simulate the torsional behavior of stents, its time-consuming nature makes it difficult to meet the rapid design requirements for individualized stents. Thus, integrating efficient machine learning (ML) models into the stent design process may be a viable approach. In this study, a machine learning-based rapid prediction method was established to achieve the rapid prediction of torsional performance of personalized peripheral artery stents. A dataset containing 200 different stent designs was generated using Latin Hypercube Sampling (LHS) and FEM. The dataset was divided into a training set (160 samples) and a test set (40 samples). Based on four input variables—the length of strut ring (LS), the width of strut (WS), the width of link (WL), and the thickness of stent (T)—the predictive performance of polynomial regression (PR), random forest regression (RFR), and support vector regression (SVR) for the twist metric (TM) was compared. To simulate the real-world application of ML models, after training and testing the ML models, the entire dataset (combining the training and test sets) was used for re-learning while keeping the control parameters unchanged. A validation set (10 samples) was generated through sampling and FEM, and the re-learned ML models were used to predict and validate their performance. By comprehensively comparing the predictive performance of the ML models on the training set, test set, and validation set, the algorithm performance ranked as follows: PR&gt;SVR&gt;RFR. The PR model achieved a mean absolute error (MAE) of (training set = 0.02847; test set = 0.03083; validation set = 0.04311) and a coefficient of determination (<i>R</i><sup>2</sup>) of (training set = 0.95148; test set = 0.97822; validation set = 0.94397). This method can effectively shorten the design cycle of stents and meet the need for personalized stent rapid design and choice. In addition, this method can also be extended to predict other mechanical properties of the stent and can be used in stent multi-objective design optimization.</p>\u0000 </div>","PeriodicalId":50349,"journal":{"name":"International Journal for Numerical Methods in Biomedical Engineering","volume":"41 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-03-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143638997","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Using Approximate Bayesian Computation to Calibrate the Model Parameters Characterizing the Autoregulatory Behavior of Microvessels
IF 2.2 4区 医学
International Journal for Numerical Methods in Biomedical Engineering Pub Date : 2025-03-17 DOI: 10.1002/cnm.70023
Ali Daher
{"title":"Using Approximate Bayesian Computation to Calibrate the Model Parameters Characterizing the Autoregulatory Behavior of Microvessels","authors":"Ali Daher","doi":"10.1002/cnm.70023","DOIUrl":"https://doi.org/10.1002/cnm.70023","url":null,"abstract":"<p>This study aims to leverage available experimental data on the myogenic and endothelial responses of the microvessels to calibrate the parameters and refine the functional form of the compliance feedback model. The experimental data used in this study trace the changes in the vessel calibre of individual arteriolar vessels in response to changes in the intraluminal pressure and/or the pressure gradient, which correspond to the myogenic and endothelial mechanisms, respectively. The compliance feedback model was previously developed to characterize the elastic and autoregulatory behavior of microvessels. We devise and employ a two-stage sequential Monte Carlo (MC) approximate Bayesian computation (ABC) scheme to obtain the posterior distribution of the model's parameters, such that the final parameter space distribution integrates information from any prior knowledge of the parameters, the model dynamics, and the available experimental data. Furthermore, the calibration scheme provides key insights into the underlying mechanistic features of the dynamical system; namely, the ABC scheme reveals that there is a marked difference in the time constants between the myogenic-induced dilation and constriction. Overall, upon parameter calibration, the computationally low-cost compliance feedback model achieves very good agreement with the experimental measurements, despite limited data availability, demonstrating that the model provides a simple, compact, yet robust and physiologically grounded characterization of the autoregulatory response, all of which are essential attributes to increase the translatability of hemodynamic models into the clinical environment for future clinical applications.</p>","PeriodicalId":50349,"journal":{"name":"International Journal for Numerical Methods in Biomedical Engineering","volume":"41 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-03-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cnm.70023","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143632844","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mechanobiological Model of Endochondral Ossification and Trabecular Bone Modeling
IF 2.2 4区 医学
International Journal for Numerical Methods in Biomedical Engineering Pub Date : 2025-03-14 DOI: 10.1002/cnm.70024
Rodrigo López-Vaca, Carlos A. Narváez-Tovar, Raj Das, Gregory de Boer, Salah Ramtani, Abdelkader Boucetta, Diego A. Garzón-Alvarado
{"title":"Mechanobiological Model of Endochondral Ossification and Trabecular Bone Modeling","authors":"Rodrigo López-Vaca,&nbsp;Carlos A. Narváez-Tovar,&nbsp;Raj Das,&nbsp;Gregory de Boer,&nbsp;Salah Ramtani,&nbsp;Abdelkader Boucetta,&nbsp;Diego A. Garzón-Alvarado","doi":"10.1002/cnm.70024","DOIUrl":"https://doi.org/10.1002/cnm.70024","url":null,"abstract":"<div>\u0000 \u0000 <p>This work presents the integration of mechanobiological models to predict the natural evolution of bone modeling and remodeling processes to obtain the architecture of trabecular bone from the embryonic stage in mammalians. Bone modeling is simulated in two and three dimensions using a reaction–diffusion mechanism with parameters in Turing space. This approach involves the interaction of two molecular factors (VEGF and MMP13) released by hypertrophic chondrocytes that diffuse and interact within a hyaline cartilage matrix. The bone remodeling process follows the model proposed by Komarova et al. employing a set of differential equations to describe autocrine and paracrine interactions between osteoblastic and osteoclastic cells, determining cellular dynamics and changes in bone mass. Bidimensional and tridimensional results for a cartilage portion predict morphological self-organization parameters between VEGF and MMP13, similar to those present in the architecture of immature trabecular bone. These findings suggest that the dynamic properties of molecular factors play a crucial role in the temporal self-organization of bone mineralization metabolism, leading to a heterogeneous trabecular architecture characteristic of primary trabecular bone. Through the three-dimensional bone remodeling model performed on the surface of trabeculae, it is established that equilibrium in population dynamics leads to asynchronous homeostatic remodeling for bone renewal, culminating in the formation of secondary trabecular bone.</p>\u0000 </div>","PeriodicalId":50349,"journal":{"name":"International Journal for Numerical Methods in Biomedical Engineering","volume":"41 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-03-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143622456","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advancements in Coronary Bifurcation Stenting Techniques: Insights From Computational and Bench Testing Studies
IF 2.2 4区 医学
International Journal for Numerical Methods in Biomedical Engineering Pub Date : 2025-03-14 DOI: 10.1002/cnm.70000
Andrea Colombo, Claudio Chiastra, Diego Gallo, Poay Huan Loh, Socrates Dokos, Mingzi Zhang, Hamed Keramati, Dario Carbonaro, Francesco Migliavacca, Tapabrata Ray, Nigel Jepson, Susann Beier
{"title":"Advancements in Coronary Bifurcation Stenting Techniques: Insights From Computational and Bench Testing Studies","authors":"Andrea Colombo,&nbsp;Claudio Chiastra,&nbsp;Diego Gallo,&nbsp;Poay Huan Loh,&nbsp;Socrates Dokos,&nbsp;Mingzi Zhang,&nbsp;Hamed Keramati,&nbsp;Dario Carbonaro,&nbsp;Francesco Migliavacca,&nbsp;Tapabrata Ray,&nbsp;Nigel Jepson,&nbsp;Susann Beier","doi":"10.1002/cnm.70000","DOIUrl":"https://doi.org/10.1002/cnm.70000","url":null,"abstract":"<p>Coronary bifurcation lesions present complex challenges in interventional cardiology, necessitating effective stenting techniques to achieve optimal results. This literature review comprehensively examines the application of computational and bench testing methods in coronary bifurcation stenting, offering insights into procedural aspects, stent design considerations, and patient-specific characteristics. Structural mechanics finite element analysis, computational fluid dynamics, and multi-objective optimization are valuable tools for evaluating stenting strategies, including provisional side branch stenting and two-stenting techniques. We highlight the impact of procedural factors, such as balloon positioning and rewiring techniques, and stent design features on the outcome of percutaneous coronary interventions with stents. We discuss the importance of patient-specific characteristics in deployment strategies, such as bifurcation angle and plaque properties. This understanding informs present and future research and clinical practice on bifurcation stenting. Computational simulations are a continuously maturing advance that has significantly enhanced stenting devices and techniques for coronary bifurcation lesions over the years. However, the accurate account of patient-specific vessel and lesion characteristics, both in terms of anatomical and accurate physiological behavior, and their large variation between patients, remains a significant challenge in the field. In this context, advancements in multi-objective optimization offer significant opportunities for refining stent design and procedural practices.</p>","PeriodicalId":50349,"journal":{"name":"International Journal for Numerical Methods in Biomedical Engineering","volume":"41 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-03-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cnm.70000","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143629809","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
One-Dimensional Blood Flow Modeling in the Cardiovascular System. From the Conventional Physiological Setting to Real-Life Hemodynamics
IF 2.2 4区 医学
International Journal for Numerical Methods in Biomedical Engineering Pub Date : 2025-03-12 DOI: 10.1002/cnm.70020
Pablo J. Blanco, Lucas O. Müller
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