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Annual Review of Animal Biosciences最新文献

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Cloning for the Twenty-First Century and Its Place in Endangered Species Conservation. 二十一世纪的克隆及其在濒危物种保护中的地位。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2024-02-15 Epub Date: 2023-11-21 DOI: 10.1146/annurev-animal-071423-093523
Veronica B Cowl, Pierre Comizzoli, Ruth Appeltant, Rhiannon L Bolton, Robert K Browne, William V Holt, Linda M Penfold, Aleona Swegen, Susan L Walker, Suzannah A Williams
{"title":"Cloning for the Twenty-First Century and Its Place in Endangered Species Conservation.","authors":"Veronica B Cowl, Pierre Comizzoli, Ruth Appeltant, Rhiannon L Bolton, Robert K Browne, William V Holt, Linda M Penfold, Aleona Swegen, Susan L Walker, Suzannah A Williams","doi":"10.1146/annurev-animal-071423-093523","DOIUrl":"10.1146/annurev-animal-071423-093523","url":null,"abstract":"<p><p>Cloning as it relates to the animal kingdom generally refers to the production of genetically identical individuals. Because cloning is increasingly the subject of renewed attention as a tool for rescuing endangered or extinct species, it seems timely to dissect the role of the numerous reproductive techniques encompassed by this term in animal species conservation. Although cloning is typically associated with somatic cell nuclear transfer, the recent advent of additional techniques that allow genome replication without genetic recombination demands that the use of induced pluripotent stem cells to generate gametes or embryos, as well as older methods such as embryo splitting, all be included in this discussion. Additionally, the phenomenon of natural cloning (e.g., a subset of fish, birds, invertebrates, and reptilian species that reproduce via parthenogenesis) must also be pointed out. Beyond the biology of these techniques are practical considerations and the ethics of using cloning and associated procedures in endangered or extinct species. All of these must be examined in concert to determine whether cloning has a place in species conservation. Therefore, we synthesize progress in cloning and associated techniques and dissect the practical and ethical aspects of these methods as they pertain to endangered species conservation.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"91-112"},"PeriodicalIF":8.7,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138292172","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
How Fish Population Genomics Can Promote Sustainable Fisheries: A Road Map. 鱼类种群基因组学如何促进可持续渔业：路线图。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2024-02-15 Epub Date: 2023-10-31 DOI: 10.1146/annurev-animal-021122-102933
Leif Andersson, Dorte Bekkevold, Florian Berg, Edward D Farrell, Sabine Felkel, Mafalda S Ferreira, Angela P Fuentes-Pardo, Jake Goodall, Mats Pettersson
{"title":"How Fish Population Genomics Can Promote Sustainable Fisheries: A Road Map.","authors":"Leif Andersson, Dorte Bekkevold, Florian Berg, Edward D Farrell, Sabine Felkel, Mafalda S Ferreira, Angela P Fuentes-Pardo, Jake Goodall, Mats Pettersson","doi":"10.1146/annurev-animal-021122-102933","DOIUrl":"10.1146/annurev-animal-021122-102933","url":null,"abstract":"<p><p>Maintenance of genetic diversity in marine fishes targeted by commercial fishing is a grand challenge for the future. Most of these species are abundant and therefore important for marine ecosystems and food security. Here, we present a road map of how population genomics can promote sustainable fisheries. In these species, the development of reference genomes and whole genome sequencing is key, because genetic differentiation at neutral loci is usually low due to large population sizes and gene flow. First, baseline allele frequencies representing genetically differentiated populations within species must be established. These can then be used to accurately determine the composition of mixed samples, forming the basis for population demographic analysis to inform sustainably set fish quotas. SNP-chip analysis is a cost-effective method for determining baseline allele frequencies and for population identification in mixed samples. Finally, we describe how genetic marker analysis can transform stock identification and management.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"1-20"},"PeriodicalIF":8.7,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71428230","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advocating for Generalizability: Accepting Inherent Variability in Translation of Animal Research Outcomes. 倡导可推广性：接受动物研究成果转化中固有的变异性。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2024-02-15 DOI: 10.1146/annurev-animal-021022-043531
F C Hankenson, E M Prager, B R Berridge
{"title":"Advocating for Generalizability: Accepting Inherent Variability in Translation of Animal Research Outcomes.","authors":"F C Hankenson, E M Prager, B R Berridge","doi":"10.1146/annurev-animal-021022-043531","DOIUrl":"10.1146/annurev-animal-021022-043531","url":null,"abstract":"<p><p>Advancing scientific discovery requires investigators to embrace research practices that increase transparency and disclosure about materials, methods, and outcomes. Several research advocacy and funding organizations have produced guidelines and recommended practices to enhance reproducibility through detailed and rigorous research approaches; however, confusion around vocabulary terms and a lack of adoption of suggested practices have stymied successful implementation. Although reproducibility of research findings cannot be guaranteed due to extensive inherent variables in attempts at experimental repetition, the scientific community can advocate for generalizability in the application of data outcomes to ensure a broad and effective impact on the comparison of animals to translation within human research. This report reviews suggestions, based upon work with National Institutes of Health advisory groups, for improving rigor and transparency in animal research through aspects of experimental design, statistical assessment, and reporting factors to advocate for generalizability in the application of comparative outcomes between animals and humans.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":"12 ","pages":"391-410"},"PeriodicalIF":8.7,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139742374","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advances and Challenges in Cell Biology for Cultured Meat. 培养肉细胞生物学研究进展与挑战。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2024-02-15 Epub Date: 2023-11-14 DOI: 10.1146/annurev-animal-021022-055132
Beatriz Martins, Arthur Bister, Richard G J Dohmen, Maria Ana Gouveia, Rui Hueber, Lea Melzener, Tobias Messmer, Joanna Papadopoulos, Joana Pimenta, Dhruv Raina, Lieke Schaeken, Sara Shirley, Benjamin P Bouchet, Joshua E Flack
{"title":"Advances and Challenges in Cell Biology for Cultured Meat.","authors":"Beatriz Martins, Arthur Bister, Richard G J Dohmen, Maria Ana Gouveia, Rui Hueber, Lea Melzener, Tobias Messmer, Joanna Papadopoulos, Joana Pimenta, Dhruv Raina, Lieke Schaeken, Sara Shirley, Benjamin P Bouchet, Joshua E Flack","doi":"10.1146/annurev-animal-021022-055132","DOIUrl":"10.1146/annurev-animal-021022-055132","url":null,"abstract":"<p><p>Cultured meat is an emerging biotechnology that aims to produce meat from animal cell culture, rather than from the raising and slaughtering of livestock, on environmental and animal welfare grounds. The detailed understanding and accurate manipulation of cell biology are critical to the design of cultured meat bioprocesses. Recent years have seen significant interest in this field, with numerous scientific and commercial breakthroughs. Nevertheless, these technologies remain at a nascent stage, and myriad challenges remain, spanning the entire bioprocess. From a cell biological perspective, these include the identification of suitable starting cell types, tuning of proliferation and differentiation conditions, and optimization of cell-biomaterial interactions to create nutritious, enticing foods. Here, we discuss the key advances and outstanding challenges in cultured meat, with a particular focus on cell biology, and argue that solving the remaining bottlenecks in a cost-effective, scalable fashion will require coordinated, concerted scientific efforts. Success will also require solutions to nonscientific challenges, including regulatory approval, consumer acceptance, and market feasibility. However, if these can be overcome, cultured meat technologies can revolutionize our approach to food.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"345-368"},"PeriodicalIF":8.7,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"107592595","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetics and Evolution of Bird Migration. 鸟类迁徙的遗传学与进化。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2024-02-15 Epub Date: 2023-10-31 DOI: 10.1146/annurev-animal-021122-092239
Zhongru Gu, Andrew Dixon, Xiangjiang Zhan
{"title":"Genetics and Evolution of Bird Migration.","authors":"Zhongru Gu, Andrew Dixon, Xiangjiang Zhan","doi":"10.1146/annurev-animal-021122-092239","DOIUrl":"10.1146/annurev-animal-021122-092239","url":null,"abstract":"<p><p>Bird migration has long been a subject of fascination for humankind and is a behavior that is both intricate and multifaceted. In recent years, advances in technology, particularly in the fields of genomics and animal tracking, have enabled significant progress in our understanding of this phenomenon. In this review, we provide an overview of the latest advancements in the genetics of bird migration, with a particular focus on genomics, and examine various factors that contribute to the evolution of this behavior, including climate change. Integration of research from the fields of genomics, ecology, and evolution can enhance our comprehension of the complex mechanisms involved in bird migration and inform conservation efforts in a rapidly changing world.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"21-43"},"PeriodicalIF":8.7,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71428229","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Sperm in the Mammalian Female Reproductive Tract: Surfing Through the Tract to Try to Beat the Odds. 哺乳动物雌性生殖道中的精子：在生殖道中漫游，试图打破几率。
IF 12.3 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2024-02-15 Epub Date: 2023-10-31 DOI: 10.1146/annurev-animal-021022-040629
David J Miller
{"title":"Sperm in the Mammalian Female Reproductive Tract: Surfing Through the Tract to Try to Beat the Odds.","authors":"David J Miller","doi":"10.1146/annurev-animal-021022-040629","DOIUrl":"10.1146/annurev-animal-021022-040629","url":null,"abstract":"<p><p>Mammalian sperm are deposited in the vagina or the cervix/uterus at coitus or at artificial insemination, and the fertilizing sperm move through the female reproductive tract to the ampulla of the oviduct, the site of fertilization. But the destination of most sperm is not the oviduct. Most sperm are carried by retrograde fluid flow to the vagina, are phagocytosed, and/or do not pass barriers on the pathway to the oviduct. The sperm that reach the site of fertilization are the exceptions and winners of one of the most stringent selection processes in nature. This review discusses the challenges sperm encounter and how the few sperm that reach the site of fertilization overcome them. The sperm that reach the goal must navigate viscoelastic fluid, swim vigorously and cooperatively along the walls of the female tract, avoid the innate immune system, and respond to potential cues to direct their movement.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"301-319"},"PeriodicalIF":12.3,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11149062/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71428231","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Conservation Genomics and Metagenomics of Giant and Red Pandas in the Wild. 野生大熊猫和红熊猫的保护基因组学和宏基因组学。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2024-02-15 Epub Date: 2023-10-20 DOI: 10.1146/annurev-animal-021022-054730
Yisi Hu, Yibo Hu, Wenliang Zhou, Fuwen Wei
{"title":"Conservation Genomics and Metagenomics of Giant and Red Pandas in the Wild.","authors":"Yisi Hu, Yibo Hu, Wenliang Zhou, Fuwen Wei","doi":"10.1146/annurev-animal-021022-054730","DOIUrl":"10.1146/annurev-animal-021022-054730","url":null,"abstract":"<p><p>Giant pandas and red pandas are endangered species with similar specialized bamboo diet and partial sympatric distribution in China. Over the last two decades, the rapid development of genomics and metagenomics research on these species has enriched our knowledge of their biology, ecology, physiology, genetics, and evolution, which is crucial and useful for their conservation. We describe the evolutionary history, endangerment processes, genetic diversity, and population structure of wild giant pandas and two species of red pandas (Chinese and Himalayan red pandas). In addition, we explore how genomics and metagenomics studies have provided insight into the convergent adaptation of pandas to the specialized bamboo diet. Finally, we discuss how these findings are applied to effective conservation management of giant and red pandas in the wild and in captivity to promote the long-term persistence of these species.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"69-89"},"PeriodicalIF":8.7,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49683954","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthetic Communities of Gut Microbes for Basic Research and Translational Approaches in Animal Health and Nutrition. 肠道微生物的合成群落在动物健康和营养的基础研究和转化方法。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2024-02-15 Epub Date: 2023-11-14 DOI: 10.1146/annurev-animal-021022-025552
Susan A V Jennings, Thomas Clavel
{"title":"Synthetic Communities of Gut Microbes for Basic Research and Translational Approaches in Animal Health and Nutrition.","authors":"Susan A V Jennings, Thomas Clavel","doi":"10.1146/annurev-animal-021022-025552","DOIUrl":"10.1146/annurev-animal-021022-025552","url":null,"abstract":"<p><p>Microbes and animals have a symbiotic relationship that greatly influences nutrient uptake and animal health. This relationship can be studied using selections of microbes termed synthetic communities, or SynComs. SynComs are used in many different animal hosts, including agricultural animals, to investigate microbial interactions with nutrients and how these affect animal health. The most common host focuses for SynComs are currently mouse and human, from basic mechanistic research through to translational disease models and live biotherapeutic products (LBPs) as treatments. We discuss SynComs used in basic research models and findings that relate to human and animal health and nutrition. Translational use cases of SynComs are discussed, followed by LBPs, especially within the context of agriculture. SynComs still face challenges, such as standardization for reproducibility and contamination risks. However, the future of SynComs is hopeful, especially in the areas of genome-guided SynCom design and custom SynCom-based treatments.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"283-300"},"PeriodicalIF":8.7,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"107592596","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Introduction. 介绍。
IF 12 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2024-02-15 DOI: 10.1146/annurev-av-12-120423-100001
Mike Roberts, Harris Lewin
{"title":"Introduction.","authors":"Mike Roberts, Harris Lewin","doi":"10.1146/annurev-av-12-120423-100001","DOIUrl":"10.1146/annurev-av-12-120423-100001","url":null,"abstract":"","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":"12 ","pages":"i"},"PeriodicalIF":12.0,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139742377","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Breeding and Selecting Corals Resilient to Global Warming. 繁殖和选择对全球变暖有抵抗力的珊瑚。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2024-02-15 Epub Date: 2023-11-06 DOI: 10.1146/annurev-animal-021122-093315
K M Quigley
{"title":"Breeding and Selecting Corals Resilient to Global Warming.","authors":"K M Quigley","doi":"10.1146/annurev-animal-021122-093315","DOIUrl":"10.1146/annurev-animal-021122-093315","url":null,"abstract":"<p><p>Selective breeding of resilient organisms is an emerging topic in marine conservation. It can help us predict how species will adapt in the future and how we can help restore struggling populations effectively in the present. Scleractinian corals represent a potential tractable model system given their widescale phenotypic plasticity across fitness-related traits and a reproductive life history based on mass synchronized spawning. Here, I explore the justification for breeding in corals, identify underutilized pathways of acclimation, and highlight avenues for quantitative targeted breeding from the coral host and symbiont perspective. Specifically, the facilitation of enhanced heat tolerance by targeted breeding of plasticity mechanisms is underutilized. Evidence from theoretical genetics identifies potential pitfalls, including inattention to physical and genetic characteristics of the receiving environment. Three criteria for breeding emerge from this synthesis: selection from warm, variable reefs that have survived disturbance. This information will be essential to protect what we have and restore what we can.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"209-332"},"PeriodicalIF":8.7,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71487783","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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