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Annual Review of Animal Biosciences最新文献

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Breathprints of the Barn: The Future of Livestock Research and Monitoring with Exhalomics. 谷仓的呼吸指纹：畜牧业研究和呼气组学监测的未来。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2025-10-08 DOI: 10.1146/annurev-animal-030424-085944
M Niu, U Arshad, M Z Islam, M A Barrientos-Blanco, E Slack, S Giannoukos, R Zenobi
{"title":"Breathprints of the Barn: The Future of Livestock Research and Monitoring with Exhalomics.","authors":"M Niu, U Arshad, M Z Islam, M A Barrientos-Blanco, E Slack, S Giannoukos, R Zenobi","doi":"10.1146/annurev-animal-030424-085944","DOIUrl":"https://doi.org/10.1146/annurev-animal-030424-085944","url":null,"abstract":"<p><p>Livestock farming faces increasing demands for sustainability and improved animal welfare. Noninvasive approaches for monitoring animal health and physiology are of growing interest. Exhaled breath analysis, or exhalomics, has emerged as a promising tool for detecting volatile organic compounds and gases associated with metabolism, disease states, physiological processes, and microbiome in livestock. This review synthesizes current advancements in breath sampling and analytical technologies and evaluates applications in disease diagnostics, nutritional assessment, and physiological and microbial profiling across livestock species. Although progress is evident, key challenges remain, including sampling variability, incomplete metabolite annotation, and limited scalability for field use. Future efforts should prioritize standardizing protocols; expanding livestock-specific spectral libraries; and developing affordable, real-time sensors for on-farm deployment. Integrating exhalomics with multi-omics and artificial intelligence-driven analytics holds potential to enable earlier disease detection, improve production efficiency, and reduce environmental impacts, ultimately advancing precision livestock farming and animal welfare over the coming decade.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":""},"PeriodicalIF":8.7,"publicationDate":"2025-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145253301","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Roles and Regulation of DNA Methylation in Early Mammalian Development. DNA甲基化在哺乳动物早期发育中的作用和调控。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2025-10-08 DOI: 10.1146/annurev-animal-030424-085652
Elena Ivanova, Gavin Kelsey
{"title":"Roles and Regulation of DNA Methylation in Early Mammalian Development.","authors":"Elena Ivanova, Gavin Kelsey","doi":"10.1146/annurev-animal-030424-085652","DOIUrl":"https://doi.org/10.1146/annurev-animal-030424-085652","url":null,"abstract":"<p><p>DNA methylation was the earliest epigenetic mark discovered-it is essential for mammalian development and forms a molecular memory that can transcend generations, as in the phenomenon of genomic imprinting. Set against this long-term potential, methylation is dynamic across the life cycle, with genome-wide changes at germ-cell specification, gametogenesis, and preimplantation development accompanying major shifts in cell potency. With a tool kit of precision genetic reagents, the mouse has been a mainstay in developing mechanistic understanding of how methylation is targeted to the genome and in exploring its susceptibility to environmental factors, such as parental diet. The availability of genome sequence from many more species combined with the ability to profile methylation and other epigenetic marks in very small numbers of cells now provides rich epigenomic information from other mammals. This information has begun to reveal both similarities as well as surprising differences in the way in which methylation is patterned across the genome among mammals. Such knowledge will be critical in assessing the outcomes of interventions during assisted reproduction in human clinical practice and livestock production.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":""},"PeriodicalIF":8.7,"publicationDate":"2025-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145253342","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ups and Downs of a Sexologist and One-Time Phytologist. 一个性学家和曾经的植物学家的起起落落。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2025-08-25 DOI: 10.1146/annurev-animal-030424-091701
R Michael Roberts
{"title":"Ups and Downs of a Sexologist and One-Time Phytologist.","authors":"R Michael Roberts","doi":"10.1146/annurev-animal-030424-091701","DOIUrl":"https://doi.org/10.1146/annurev-animal-030424-091701","url":null,"abstract":"<p><p>This article charts the history of a scientific career that began in the plant sciences and is ending in research on the placenta-brain axis and on the developmental origins of the mammalian placenta. In the middle was the characterization of uteroferrin and interferon-τ, the role of the latter in maternal recognition of pregnancy, and the development of a commercial pregnancy test for dairy cows. The article also emphasizes the roles personal upheavals and happenchance played in shaping a professional life and dealing with an incident of scientific malfeasance that threatened it. The article concludes with a discussion of the difficulties of practicing science during the twilight years.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":""},"PeriodicalIF":8.7,"publicationDate":"2025-08-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144975547","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dietary Interventions for Optimal Liver Function in High-Yielding Dairy Cows. 饲粮干预对高产奶牛最佳肝功能的影响。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2025-08-13 DOI: 10.1146/annurev-animal-030424-085431
James K Drackley
{"title":"Dietary Interventions for Optimal Liver Function in High-Yielding Dairy Cows.","authors":"James K Drackley","doi":"10.1146/annurev-animal-030424-085431","DOIUrl":"https://doi.org/10.1146/annurev-animal-030424-085431","url":null,"abstract":"<p><p>Liver function is critical for high-producing dairy cows to achieve high milk production and good fertility, as well as to avoid periparturient health problems. Key processes include gluconeogenesis, fatty acid metabolism, protein synthesis, amino acid metabolism and urea formation, bile acid synthesis, detoxification, endocrine functions, and immune functions. Various tests have been used to assess liver function. Fatty liver develops when fatty acid uptake exceeds the liver's capacity to oxidize fatty acids and export triacylglycerols and may negatively affect hepatic function. Metabolomics, transcriptomics, and proteomics are opening new insights into hepatic adaptations in normal and abnormal situations, such as the roles of acylcarnitines, lysophospholipids, and sphingolipids. Nutritional strategies such as controlled energy dry cow diets and supplemental rumen-protected methionine and choline help maintain liver function during the periparturient period. Nutritional manipulations that impact liver function help to promote health and productivity of high-producing dairy cows.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":""},"PeriodicalIF":8.7,"publicationDate":"2025-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144849465","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Geometric Framework for Nutrition and Its Application to Rodent Models. 营养几何框架及其在啮齿动物模型中的应用。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2025-02-01 Epub Date: 2024-11-15 DOI: 10.1146/annurev-animal-111523-102327
Alistair M Senior, David Raubenheimer, David G Le Couteur, Stephen J Simpson
{"title":"The Geometric Framework for Nutrition and Its Application to Rodent Models.","authors":"Alistair M Senior, David Raubenheimer, David G Le Couteur, Stephen J Simpson","doi":"10.1146/annurev-animal-111523-102327","DOIUrl":"10.1146/annurev-animal-111523-102327","url":null,"abstract":"<p><p>Rodents have been the primary model for mammalian nutritional physiology for decades. Despite an extensive body of literature, controversies remain around the effects of specific nutrients and total energy intake on several aspects of nutritional biology, even in this well-studied model. One approach that is helping to bring clarity to the field is the geometric framework for nutrition (GFN). The GFN is a multidimensional paradigm that can be used to conceptualize nutrition and nutritional effects, design experiments, and interpret results. To date, more than 30 publications have applied the GFN to data from rodent models of nutrition. Here we review the major conclusions from these studies. We pay particular attention to the effects of macronutrients on satiety, glucose metabolism, lifespan and the biology of aging, reproductive function, immune function, and the microbiome. We finish by highlighting several knowledge gaps that became evident upon reviewing this literature.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"389-410"},"PeriodicalIF":8.7,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142639978","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pregnancy Establishment and Diagnosis in Livestock. 家畜的妊娠确定和诊断。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2025-02-01 Epub Date: 2024-08-21 DOI: 10.1146/annurev-animal-021022-032214
Troy L Ott, Ahmed Tibary, Muhammad Waqas, Rodney Geisert, Julio Giordano
{"title":"Pregnancy Establishment and Diagnosis in Livestock.","authors":"Troy L Ott, Ahmed Tibary, Muhammad Waqas, Rodney Geisert, Julio Giordano","doi":"10.1146/annurev-animal-021022-032214","DOIUrl":"10.1146/annurev-animal-021022-032214","url":null,"abstract":"<p><p>This comprehensive review explores the complex processes of reproduction, pregnancy establishment, and pregnancy diagnostic methods in cattle, sheep, goats, swine, horses, and camelids. It provides an overview of the history of pregnancy detection and an in-depth exploration of the physiology of pregnancy in livestock. The detection of conceptus tissue and fluids, conceptus-produced hormones, and maternal responses to conceptus signals, crucial for pregnancy diagnosis, are also discussed in detail, as are emerging methods for pregnancy diagnosis in livestock species. Overall, this review emphasizes the direct impact of pregnancy diagnosis and efficient pregnancy management for profitability of livestock enterprises.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"211-232"},"PeriodicalIF":8.7,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142019212","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evolution of 3D Chromatin Folding. 三维染色质折叠的进化。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2025-02-01 Epub Date: 2024-11-12 DOI: 10.1146/annurev-animal-111523-102233
Lucía Álvarez-González, Aurora Ruiz-Herrera
{"title":"Evolution of 3D Chromatin Folding.","authors":"Lucía Álvarez-González, Aurora Ruiz-Herrera","doi":"10.1146/annurev-animal-111523-102233","DOIUrl":"10.1146/annurev-animal-111523-102233","url":null,"abstract":"<p><p>Studies examining the evolution of genomes have focused mainly on sequence conservation. However, the inner working of a cell implies tightly regulated crosstalk between complex gene networks controlled by small dispersed regulatory elements of physically contacting DNA regions. How these different levels of chromatin organization crosstalk in different species underpins the potential for genome evolutionary plasticity. We review the evolution of chromatin organization across the Animal Tree of Life. We introduce general aspects of the mode and tempo of genome evolution to later explore the multiple layers of genome organization. We argue that both genome and chromosome size modulate patterns of chromatin folding and that chromatin interactions facilitate the formation of lineage-specific chromosomal reorganizations, especially in germ cells. Overall, analyzing the mechanistic forces involved in the maintenance of chromatin structure and function of the germ line is critical for understanding genome evolution, maintenance, and inheritance.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"49-71"},"PeriodicalIF":8.7,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142631067","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Rhesus Macaque as an Animal Model for Human Nutrition: An Ecological-Evolutionary Perspective. 作为人类营养动物模型的猕猴：生态进化的视角。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2025-02-01 Epub Date: 2024-11-18 DOI: 10.1146/annurev-animal-111523-102354
Zhenwei Cui, Yunlong Dong, Jonathan Sholl, Jiqi Lu, David Raubenheimer
{"title":"The Rhesus Macaque as an Animal Model for Human Nutrition: An Ecological-Evolutionary Perspective.","authors":"Zhenwei Cui, Yunlong Dong, Jonathan Sholl, Jiqi Lu, David Raubenheimer","doi":"10.1146/annurev-animal-111523-102354","DOIUrl":"10.1146/annurev-animal-111523-102354","url":null,"abstract":"<p><p>Nutrition is a complex and contested area in biomedicine, which requires diverse evidence sources. Nonhuman primate models are considered an important biomedical research tool because of their biological similarities to humans, but they are typically used with little explicit consideration of their ecology and evolution. Using the rhesus macaque (RM), we consider the potential of nutritional ecology for enriching the use of primates as models for human nutrition. We introduce some relevant aspects of RM evolutionary and social ecology and discuss two examples where they have been used in biomedical research: obesity and aging. We next consider how insights from nutritional ecology can help inform and direct the use of RM as a biomedical model. We conclude by illustrating how conceptual tools might inform the use of RM as a model for human nutrition and extracting insights from RM that might be relevant to broader theoretical considerations around animal model systems.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"441-464"},"PeriodicalIF":8.7,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142668906","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Introduction. 介绍。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2025-02-01 DOI: 10.1146/annurev-av-13-121824-100001
Harris Lewin, R Michael Roberts
{"title":"Introduction.","authors":"Harris Lewin, R Michael Roberts","doi":"10.1146/annurev-av-13-121824-100001","DOIUrl":"https://doi.org/10.1146/annurev-av-13-121824-100001","url":null,"abstract":"","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":"13 1","pages":"i"},"PeriodicalIF":8.7,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143450626","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Translational Relevance and Future Integration of the Oncopig Cancer Model in Preclinical Applications. Oncopig 癌症模型在临床前应用中的转化意义和未来整合。
IF 8.7 1区 农林科学
Annual Review of Animal Biosciences Pub Date : 2025-02-01 Epub Date: 2024-10-17 DOI: 10.1146/annurev-animal-111523-102125
Lobna Elkhadragy, Ron C Gaba, Matthew M Niemeyer, Lawrence B Schook, Kyle M Schachtschneider
{"title":"Translational Relevance and Future Integration of the Oncopig Cancer Model in Preclinical Applications.","authors":"Lobna Elkhadragy, Ron C Gaba, Matthew M Niemeyer, Lawrence B Schook, Kyle M Schachtschneider","doi":"10.1146/annurev-animal-111523-102125","DOIUrl":"10.1146/annurev-animal-111523-102125","url":null,"abstract":"<p><p>Porcine cancer models offer a valuable platform for evaluating interventions such as devices, surgeries, and locoregional therapies, which are often challenging to test in mouse models. In addition to size and anatomical similarities with humans, pigs share greater similarities in genetics, immunity, drug metabolism, and metabolic rate with humans as compared to mouse models, increasing their translational relevance. This review focuses on the Oncopig Cancer Model, a genetically engineered porcine model designed to recapitulate human cancer. Harboring a transgenic cassette that expresses oncogenic mutant <i>KRAS</i> and <i>TP53</i> under control of a Cre-Lox system, the Oncopig allows temporal and spatial control of tumor induction. Its versatility has enabled the development of diverse cancer models including liver, pancreatic, lung, and bladder cancer. Serving as a clinically relevant model for human cancer, the Oncopig addresses unmet clinical needs and holds immense promise for advancing preclinical cancer research and therapeutic development.</p>","PeriodicalId":48953,"journal":{"name":"Annual Review of Animal Biosciences","volume":" ","pages":"465-481"},"PeriodicalIF":8.7,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142478542","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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