{"title":"A new light on PLCβ!","authors":"Sithurandi Ubeysinghe , Waruna Thotamune , Ajith Karunarathne","doi":"10.1016/j.chembiol.2024.06.007","DOIUrl":"10.1016/j.chembiol.2024.06.007","url":null,"abstract":"<div><p>In this issue of <em>Cell Chemical Biology</em>, Kim et al.<span><span><sup>1</sup></span></span> present a novel optogenetic tool, opto-PLCβ, to control PLCβ signaling optically. In addition to eliciting PIP2 hydrolysis and downstream signaling in cells, opto-PLCβ also enabled probing the impact of PLCβ signaling on amygdala synaptic plasticity and fear learning in mice.</p></div>","PeriodicalId":265,"journal":{"name":"Cell Chemical Biology","volume":"31 7","pages":"Pages 1236-1238"},"PeriodicalIF":6.6,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141636768","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Blocking smoothened cholesterylation: A strategy for overcoming drug resistance in cancer","authors":"Steven Y. Cheng , Ying E. Zhang","doi":"10.1016/j.chembiol.2024.06.005","DOIUrl":"10.1016/j.chembiol.2024.06.005","url":null,"abstract":"<div><p>In this issue of <em>Cell Chemical Biology</em>, Liu et al.<span><span><sup>1</sup></span></span> report the identification of Q29, a synthetic diterpenoid that blocks covalent cholesterol modification of smoothened (SMO) and inhibits hedgehog signaling. Q29 is capable of suppressing tumor cell growth, both <em>in vitro</em> and <em>in vivo</em>, and overcoming resistance to SMO inhibitors.</p></div>","PeriodicalId":265,"journal":{"name":"Cell Chemical Biology","volume":"31 7","pages":"Pages 1231-1233"},"PeriodicalIF":6.6,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141637307","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Behavioral control through the direct, focal silencing of neuronal activity","authors":"","doi":"10.1016/j.chembiol.2024.04.003","DOIUrl":"10.1016/j.chembiol.2024.04.003","url":null,"abstract":"<div><p>The ability to optically stimulate and inhibit neurons has revolutionized neuroscience research. Here, we present a direct, potent, user-friendly chemical approach for optically silencing neurons. We have rendered saxitoxin (STX), a naturally occurring paralytic agent, transiently inert through chemical protection with a previously undisclosed nitrobenzyl-derived photocleavable group. Exposing the caged toxin, STX-bpc, to a brief (5 ms) pulse of light effects rapid release of a potent STX derivative and transient, spatially precise blockade of voltage-gated sodium channels (Na<sub>V</sub>s). We demonstrate the efficacy of STX-bpc for parametrically manipulating action potentials in mammalian neurons and brain slice. Additionally, we show the effectiveness of this reagent for silencing neural activity by dissecting sensory-evoked swimming in larval zebrafish. Photo-uncaging of STX-bpc is a straightforward method for non-invasive, reversible, spatiotemporally precise neural silencing without the need for genetic access, thus removing barriers for comparative research.</p></div>","PeriodicalId":265,"journal":{"name":"Cell Chemical Biology","volume":"31 7","pages":"Pages 1324-1335.e20"},"PeriodicalIF":6.6,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2451945624001314/pdfft?md5=44c00102a463b68a137b8af752a2e736&pid=1-s2.0-S2451945624001314-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140895872","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Discovery of YAP1/TAZ pathway inhibitors through phenotypic screening with potent anti-tumor activity via blockade of Rho-GTPase signaling","authors":"","doi":"10.1016/j.chembiol.2024.02.013","DOIUrl":"10.1016/j.chembiol.2024.02.013","url":null,"abstract":"<div><p>This study describes the identification and target deconvolution of small molecule inhibitors of oncogenic Yes-associated protein (YAP1)/TAZ activity with potent anti-tumor activity <em>in vivo</em>. A high-throughput screen (HTS) of 3.8 million compounds was conducted using a cellular YAP1/TAZ reporter assay. Target deconvolution studies identified the geranylgeranyltransferase-I (GGTase-I) complex as the direct target of YAP1/TAZ pathway inhibitors. The small molecule inhibitors block the activation of Rho-GTPases, leading to subsequent inactivation of YAP1/TAZ and inhibition of cancer cell proliferation <em>in vitro</em>. Multi-parameter optimization resulted in BAY-593, an <em>in vivo</em> probe with favorable PK properties, which demonstrated anti-tumor activity and blockade of YAP1/TAZ signaling <em>in vivo</em>.</p></div>","PeriodicalId":265,"journal":{"name":"Cell Chemical Biology","volume":"31 7","pages":"Pages 1247-1263.e16"},"PeriodicalIF":6.6,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2451945624000874/pdfft?md5=ab6d5602f6ce64a6041b30a286f547da&pid=1-s2.0-S2451945624000874-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140304135","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"CYP7B1-mediated 25-hydroxycholesterol degradation maintains quiescence-activation balance and improves therapeutic potential of mesenchymal stem cells","authors":"","doi":"10.1016/j.chembiol.2024.01.009","DOIUrl":"10.1016/j.chembiol.2024.01.009","url":null,"abstract":"<div><p>Stem cells remain quiescent <em>in vivo</em> and become activated in response to external stimuli. However, the mechanism regulating the quiescence-activation balance of bone-marrow-derived mesenchymal stem cells (BM-MSCs) is still unclear. Herein, we demonstrated that CYP7B1 was the common critical molecule that promoted activation and impeded quiescence of BM-MSCs under inflammatory stimulation. Mechanistically, CYP7B1 degrades 25-hydroxycholesterol (25-HC) into 7α,25-dihydroxycholesterol (7α,25-OHC), which alleviates the quiescence maintenance effect of 25-HC through Notch3 signaling pathway activation. CYP7B1 expression in BM-MSCs was regulated by NF-κB p65 under inflammatory conditions. BM-MSCs from CYP7B1 conditional knockout (CKO) mice had impaired activation abilities, relating to the delayed healing of bone defects. Intravenous infusion of BM-MSCs overexpressing CYP7B1 could improve the pathological scores of mice with collagen-induced arthritis. These results clarified the quiescence-activation regulatory mechanism of BM-MSCs through the NF-κB p65-CYP7B1-Notch3 axis and provided insight into enhancing BM-MSCs biological function as well as the subsequent therapeutic effect.</p></div>","PeriodicalId":265,"journal":{"name":"Cell Chemical Biology","volume":"31 7","pages":"Pages 1277-1289.e7"},"PeriodicalIF":6.6,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S245194562400045X/pdfft?md5=2bea7d0b66678d99d585b4f6835df184&pid=1-s2.0-S245194562400045X-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139916158","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A light-controlled phospholipase C for imaging of lipid dynamics and controlling neural plasticity","authors":"","doi":"10.1016/j.chembiol.2024.03.001","DOIUrl":"10.1016/j.chembiol.2024.03.001","url":null,"abstract":"<div><p>Phospholipase C (PLC) is a key enzyme that regulates physiological processes via lipid and calcium signaling. Despite advances in protein engineering, no tools are available for direct PLC control. Here, we developed a novel optogenetic tool, light-controlled PLCβ (opto-PLCβ). Opto-PLCβ uses a light-induced dimer module, which directs an engineered PLC to the plasma membrane in a light-dependent manner. Our design includes an autoinhibitory capacity, ensuring stringent control over PLC activity. Opto-PLCβ triggers reversible calcium responses and lipid dynamics in a restricted region, allowing precise spatiotemporal control of PLC signaling. Using our system, we discovered that phospholipase D-mediated phosphatidic acid contributes to diacylglycerol clearance on the plasma membrane. Moreover, we extended its applicability <em>in vivo</em>, demonstrating that opto-PLCβ can enhance amygdala synaptic plasticity and associative fear learning in mice. Thus, opto-PLCβ offers precise spatiotemporal control, enabling comprehensive investigation of PLC-mediated signaling pathways, lipid dynamics, and their physiological consequences <em>in vivo</em>.</p></div>","PeriodicalId":265,"journal":{"name":"Cell Chemical Biology","volume":"31 7","pages":"Pages 1336-1348.e7"},"PeriodicalIF":6.6,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2451945624000904/pdfft?md5=c7d9dcebdd64d13b97a9d4dcb03f6078&pid=1-s2.0-S2451945624000904-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140622978","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yvonne T. Kschonsak , Xinxin Gao , Stephen E. Miller , Sunhee Hwang , Hadir Marei , Ping Wu , Yanjie Li , Karen Ruiz , Kristel Dorighi , Loryn Holokai , Pirunthan Perampalam , Wen-Ting K. Tsai , Yee-Seir Kee , Nicholas J. Agard , Seth F. Harris , Rami N. Hannoush , Felipe de Sousa e Melo
{"title":"Potent and selective binders of the E3 ubiquitin ligase ZNRF3 stimulate Wnt signaling and intestinal organoid growth","authors":"Yvonne T. Kschonsak , Xinxin Gao , Stephen E. Miller , Sunhee Hwang , Hadir Marei , Ping Wu , Yanjie Li , Karen Ruiz , Kristel Dorighi , Loryn Holokai , Pirunthan Perampalam , Wen-Ting K. Tsai , Yee-Seir Kee , Nicholas J. Agard , Seth F. Harris , Rami N. Hannoush , Felipe de Sousa e Melo","doi":"10.1016/j.chembiol.2023.11.006","DOIUrl":"10.1016/j.chembiol.2023.11.006","url":null,"abstract":"<div><p>Selective and precise activation of signaling transduction cascades is key for cellular reprogramming and tissue regeneration. However, the development of small- or large-molecule agonists for many signaling pathways has remained elusive and is rate limiting to realize the full clinical potential of regenerative medicine. Focusing on the Wnt pathway, here we describe a series of disulfide-constrained peptides (DCPs) that promote Wnt signaling activity by modulating the cell surface levels of ZNRF3, an E3 ubiquitin ligase that controls the abundance of the Wnt receptor complex FZD/LRP at the plasma membrane. Mechanistically, monomeric DCPs induce ZNRF3 ubiquitination, leading to its cell surface clearance, ultimately resulting in FZD stabilization. Furthermore, we engineered multimeric DCPs that induce expansive growth of human intestinal organoids, revealing a dependence between valency and ZNRF3 clearance. Our work highlights a strategy for the development of potent, biologically active Wnt signaling pathway agonists via targeting of ZNRF3.</p></div>","PeriodicalId":265,"journal":{"name":"Cell Chemical Biology","volume":"31 6","pages":"Pages 1176-1187.e10"},"PeriodicalIF":6.6,"publicationDate":"2024-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138497378","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Induced proximity labeling and editing for epigenetic research","authors":"Chenwei Zhou , Sarah Wagner , Fu-Sen Liang","doi":"10.1016/j.chembiol.2024.05.005","DOIUrl":"10.1016/j.chembiol.2024.05.005","url":null,"abstract":"<div><p>Epigenetic regulation plays a pivotal role in various biological and disease processes. Two key lines of investigation have been pursued that aim to unravel endogenous epigenetic events at particular genes (probing) and artificially manipulate the epigenetic landscape (editing). The concept of induced proximity has inspired the development of powerful tools for epigenetic research. Induced proximity strategies involve bringing molecular effectors into spatial proximity with specific genomic regions to achieve the probing or manipulation of local epigenetic environments with increased proximity. In this review, we detail the development of induced proximity methods and applications in shedding light on the intricacies of epigenetic regulation.</p></div>","PeriodicalId":265,"journal":{"name":"Cell Chemical Biology","volume":"31 6","pages":"Pages 1118-1131"},"PeriodicalIF":6.6,"publicationDate":"2024-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S245194562400206X/pdfft?md5=48474e5c405cbaa65a071cc99523b246&pid=1-s2.0-S245194562400206X-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141304606","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A double whammy for KEAP1","authors":"Jan Gerhartz , Radosław P. Nowak","doi":"10.1016/j.chembiol.2024.05.014","DOIUrl":"10.1016/j.chembiol.2024.05.014","url":null,"abstract":"<div><p>In this issue of <em>Cell Chemical Biology</em>, Lu et al.<span><sup>1</sup></span> report the discovery of a bivalent KEAP1 inhibitor (biKEAP1), which more rapidly activates NRF2 compared to previously reported monovalent KEAP1 inhibitors. biKEAP1suppresses acute inflammation in animal models.</p></div>","PeriodicalId":265,"journal":{"name":"Cell Chemical Biology","volume":"31 6","pages":"Pages 1047-1049"},"PeriodicalIF":6.6,"publicationDate":"2024-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141430643","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Meet the authors: Markella Konstantinidou and Michelle R. Arkin","authors":"Markella Konstantinidou, Michelle R. Arkin","doi":"10.1016/j.chembiol.2024.05.008","DOIUrl":"10.1016/j.chembiol.2024.05.008","url":null,"abstract":"<div><p>In an interview with Dr. Ying Li, a scientific editor of <em>Cell Chemical Biology</em>, the authors of the Review titled “<span>Molecular glues for protein-protein interactions: Progressing toward a new dream</span><svg><path></path></svg>” share their perspectives on their field and life as scientists.</p></div>","PeriodicalId":265,"journal":{"name":"Cell Chemical Biology","volume":"31 6","pages":"Pages 1027-1028"},"PeriodicalIF":6.6,"publicationDate":"2024-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2451945624002095/pdfft?md5=b1a29bc399eb0942e51e90f5d04e91ce&pid=1-s2.0-S2451945624002095-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141430673","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}