VirulencePub Date : 2024-12-01Epub Date: 2024-09-06DOI: 10.1080/21505594.2024.2395837
Dongchang He, Xiyue Wang, Huiguang Wu, Kairui Cai, Xiaoli Song, Xiaoquan Wang, Jiao Hu, Shunlin Hu, Xiaowen Liu, Chan Ding, Daxin Peng, Shuo Su, Min Gu, Xiufan Liu
{"title":"Characterization of Conserved Evolution in H7N9 Avian Influenza Virus Prior Mass Vaccination.","authors":"Dongchang He, Xiyue Wang, Huiguang Wu, Kairui Cai, Xiaoli Song, Xiaoquan Wang, Jiao Hu, Shunlin Hu, Xiaowen Liu, Chan Ding, Daxin Peng, Shuo Su, Min Gu, Xiufan Liu","doi":"10.1080/21505594.2024.2395837","DOIUrl":"10.1080/21505594.2024.2395837","url":null,"abstract":"<p><p>Vaccination is crucial for the prevention and mitigation of avian influenza infections in China. The inactivated H7N9 vaccine, when administered to poultry, significantly lowers the risk of infection among both poultry and humans, while also markedly decreasing the prevalence of H7N9 detections. Highly pathogenic (HP) H7N9 viruses occasionally appear, whereas their low pathogenicity (LP) counterparts have been scarcely detected since 2018. However, these contributing factors remain poorly understood. We conducted an exploratory investigation of the mechanics via the application of comprehensive bioinformatic approaches. We delineated the Yangtze River Delta (YRD) H7N9 lineage into 5 clades (YRD-A to E). Our findings highlight the emergence and peak occurrence of the LP H7N9-containing YRD-E clade during the 5th epidemic wave in China's primary poultry farming areas. A more effective control of LP H7N9 through vaccination was observed compared to that of its HP H7N9 counterpart. YRD-E exhibited a tardy evolutionary trajectory, denoted by the conservation of its genetic and antigenic variation. Our analysis of YRD-E revealed only minimal amino acid substitutions along its phylogenetic tree and a few selective sweep mutations since 2016. In terms of epidemic fitness, the YRD-E was measured to be lower than that of the HP variants. Collectively, these findings underscore the conserved evolutionary patterns distinguishing the YRD-E. Given the conservation presented in its evolutionary patterns, the YRD-E LP H7N9 is hypothesized to be associated with a reduction following the mass vaccination in a relatively short period owing to its lower probability of antigenic variation that might affect vaccine efficiency.</p>","PeriodicalId":23747,"journal":{"name":"Virulence","volume":"15 1","pages":"2395837"},"PeriodicalIF":5.5,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11382709/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142141250","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
VirulencePub Date : 2024-12-01Epub Date: 2024-09-24DOI: 10.1080/21505594.2024.2399792
Kris Gerard Alvarez, Lisa Goral, Abdulhadi Suwandi, Lisa Lasswitz, Francisco J Zapatero-Belinchón, Katrin Ehrhardt, Kumar Nagarathinam, Katrin Künnemann, Thomas Krey, Agnes Wiedemann, Gisa Gerold, Guntram A Grassl
{"title":"Human tetraspanin CD81 facilitates invasion of <i>Salmonella enterica</i> into human epithelial cells.","authors":"Kris Gerard Alvarez, Lisa Goral, Abdulhadi Suwandi, Lisa Lasswitz, Francisco J Zapatero-Belinchón, Katrin Ehrhardt, Kumar Nagarathinam, Katrin Künnemann, Thomas Krey, Agnes Wiedemann, Gisa Gerold, Guntram A Grassl","doi":"10.1080/21505594.2024.2399792","DOIUrl":"10.1080/21505594.2024.2399792","url":null,"abstract":"<p><p>Human CD81 and CD9 are members of the tetraspanin family of proteins characterized by a canonical structure of four transmembrane domains and two extracellular loop domains. Tetraspanins are known as molecular facilitators, which assemble and organize cell surface receptors and partner molecules forming clusters known as tetraspanin-enriched microdomains. They have been implicated to play various biological roles including an involvement in infections with microbial pathogens. Here, we demonstrate an important role of CD81 for the invasion of epithelial cells by <i>Salmonella enterica</i>. We show that the overexpression of CD81 in HepG2 cells enhances invasion of various typhoidal and non-typhoidal <i>Salmonella</i> serovars. Deletion of CD81 by CRISPR/Cas9 in intestinal epithelial cells (C2BBe1 and HT29-MTX-E12) reduces <i>S</i>. Typhimurium invasion. In addition, the effect of human CD81 is species-specific as only human but not rat CD81 facilitates <i>Salmonella</i> invasion. Finally, immunofluorescence microscopy and proximity ligation assay revealed that both human tetraspanins CD81 and CD9 are recruited to the entry site of <i>S</i>. Typhimurium during invasion but not during adhesion to the host cell surface. Overall, we demonstrate that the human tetraspanin CD81 facilitates <i>Salmonella</i> invasion into epithelial host cells.</p>","PeriodicalId":23747,"journal":{"name":"Virulence","volume":" ","pages":"2399792"},"PeriodicalIF":5.5,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11423668/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142141253","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The role of HDAC6 in enhancing macrophage autophagy via the autophagolysosomal pathway to alleviate legionella pneumophila-induced pneumonia.","authors":"Minjia Chen, Xiuqin Cao, Ronghui Zheng, Haixia Chen, Ruixia He, Hao Zhou, Zhiwei Yang","doi":"10.1080/21505594.2024.2327096","DOIUrl":"10.1080/21505594.2024.2327096","url":null,"abstract":"<p><p><i>Legionella pneumophila</i> (<i>L. pneumophila</i>) is a prevalent pathogenic bacterium responsible for significant global health concerns. Nonetheless, the precise pathogenic mechanisms of <i>L. pneumophila</i> have still remained elusive. Autophagy, a direct cellular response to <i>L. pneumophila</i> infection and other pathogens, involves the recognition and degradation of these invaders in lysosomes. Histone deacetylase 6 (HDAC6), a distinctive member of the histone deacetylase family, plays a multifaceted role in autophagy regulation. This study aimed to investigate the role of HDAC6 in macrophage autophagy via the autophagolysosomal pathway, leading to alleviate <i>L. pneumophila</i>-induced pneumonia. The results revealed a substantial upregulation of HDAC6 expression level in murine lung tissues infected by <i>L. pneumophila</i>. Notably, mice lacking HDAC6 exhibited a protective response against <i>L. pneumophila</i>-induced pulmonary tissue inflammation, which was characterized by the reduced bacterial load and diminished release of pro-inflammatory cytokines. Transcriptomic analysis has shed light on the regulatory role of HDAC6 in <i>L. pneumophila</i> infection in mice, particularly through the autophagy pathway of macrophages. Validation using <i>L. pneumophila</i>-induced macrophages from mice with HDAC6 gene knockout demonstrated a decrease in cellular bacterial load, activation of the autophagolysosomal pathway, and enhancement of cellular autophagic flux. In summary, the findings indicated that HDAC6 knockout could lead to the upregulation of p-ULK1 expression level, promoting the autophagy-lysosomal pathway, increasing autophagic flux, and ultimately strengthening the bactericidal capacity of macrophages. This contributes to the alleviation of <i>L. pneumophila</i>-induced pneumonia.</p>","PeriodicalId":23747,"journal":{"name":"Virulence","volume":"15 1","pages":"2327096"},"PeriodicalIF":5.2,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10936600/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140094591","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Emergence and circulation of enterovirus B species in infants in southern China: A multicenter retrospective analysis.","authors":"Xiaohan Yang, Yudan Wu, Hongyu Zhao, Pan Liu, Lihua Liang, Aihua Yin","doi":"10.1080/21505594.2024.2329569","DOIUrl":"10.1080/21505594.2024.2329569","url":null,"abstract":"<p><strong>Background: </strong>Enteroviruses (EV) are common and can cause severe diseases, particularly in young children. However, the information of EV infection in infants in China is limited due to the vast population size and extensive geographical area of the country. Here, we conducted a retrospective multicenter analysis of available EV data to assess the current epidemiological situation in the infant population in southern China.</p><p><strong>Methods: </strong>The study enrolled infants with suspected EV infection from 34 hospitals across 12 cities in southern China between 2019 to 2022, and the confirmation of EV was done using RT-PCR and VP1 gene sequencing.</p><p><strong>Results: </strong>Out of 1221 infants enrolled, 330 (27.03%) were confirmed as EV-infected. Of these, 260 (78.79%) were newborns aged 0-28 days. The EV belonged to three species: EV-B (80.61%), EV-A (11.82%), and human rhinovirus (7.58%). Newborns were more susceptible to EV-B than older infants (<i>p</i> < 0.001). Within EV-B, we identified 15 types, with coxsackievirus (CV) B3 (20.91%), echovirus (E) 11 (19.70%), and E18 (16.97%) being the most common. The predominant EV types changed across different years. EV infection in infants followed a seasonal pattern, with a higher incidence from May to August. Furthermore, perinatal mother-to-child EV transmission in 12 mother-newborn pairs were observed.</p><p><strong>Conclusion: </strong>Our study is the first to demonstrate the emergence and widespread circulation of EV-B species, mainly CVB3, E11, and E18, in southern China, primarily affecting young infants. This research provides valuable insights for future epidemic assessment, prediction, as well as the elimination of mother-to-child transmission.</p>","PeriodicalId":23747,"journal":{"name":"Virulence","volume":"15 1","pages":"2329569"},"PeriodicalIF":5.2,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10984118/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140330195","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
VirulencePub Date : 2024-12-01Epub Date: 2024-02-16DOI: 10.1080/21505594.2024.2316438
Natalie M Kirk, Yuying Liang, Hinh Ly
{"title":"Pathogenesis and virulence of coronavirus disease: Comparative pathology of animal models for COVID-19.","authors":"Natalie M Kirk, Yuying Liang, Hinh Ly","doi":"10.1080/21505594.2024.2316438","DOIUrl":"10.1080/21505594.2024.2316438","url":null,"abstract":"<p><p>Animal models that can replicate clinical and pathologic features of severe human coronavirus infections have been instrumental in the development of novel vaccines and therapeutics. The goal of this review is to summarize our current understanding of the pathogenesis of coronavirus disease 2019 (COVID-19) and the pathologic features that can be observed in several currently available animal models. Knowledge gained from studying these animal models of SARS-CoV-2 infection can help inform appropriate model selection for disease modelling as well as for vaccine and therapeutic developments.</p>","PeriodicalId":23747,"journal":{"name":"Virulence","volume":"15 1","pages":"2316438"},"PeriodicalIF":5.5,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10878030/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139742192","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
VirulencePub Date : 2024-12-01Epub Date: 2024-05-09DOI: 10.1080/21505594.2024.2350904
Xinhao Du, Zhenzhen Tang, Li Yan, Ling Zhang, Qiao Zheng, Xianghao Zeng, Qing Hu, Qian Tian, Lanfan Liang, Xinyu Zhao, Jun Li, Ming Zhao, Xiangsheng Fu
{"title":"Norepinephrine may promote the progression of <i>Fusobacterium nucleatum</i> related colorectal cancer via quorum sensing signalling.","authors":"Xinhao Du, Zhenzhen Tang, Li Yan, Ling Zhang, Qiao Zheng, Xianghao Zeng, Qing Hu, Qian Tian, Lanfan Liang, Xinyu Zhao, Jun Li, Ming Zhao, Xiangsheng Fu","doi":"10.1080/21505594.2024.2350904","DOIUrl":"10.1080/21505594.2024.2350904","url":null,"abstract":"<p><p><i>Fusobacterium nucleatum (F. nucleatum)</i> is closely correlated with tumorigenesis in colorectal cancer (CRC). We aimed to investigate the effects of host norepinephrine on the carcinogenicity of <i>F. nucleatum</i> in CRC and reveal the underlying mechanism. The results revealed that both norepinephrine and bacterial quorum sensing (QS) molecule auto-inducer-2 (AI-2) were positively associated with the progression of <i>F. nucleatum</i> related CRC (<i>p</i> < 0.01). <i>In vitro</i> studies, norepinephrine induced upregulation of QS-associated genes and promoted the virulence and proliferation of <i>F. nucleatum</i>. Moreover, chronic stress significantly increased the colon tumour burden of Apc<sup>Min/+</sup> mice infected with <i>F. nucleatum</i> (<i>p</i> < 0.01), which was decreased by a catecholamine inhibitor (<i>p</i> < 0.001). Our findings suggest that stress-induced norepinephrine may promote the progression of <i>F. nucleatum</i> related CRC via bacterial QS signalling. These preliminary data provide a novel strategy for the management of pathogenic bacteria by targeting host hormones-bacterial QS inter-kingdom signalling.</p>","PeriodicalId":23747,"journal":{"name":"Virulence","volume":"15 1","pages":"2350904"},"PeriodicalIF":5.2,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11085999/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140899349","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
VirulencePub Date : 2024-12-01Epub Date: 2024-12-02DOI: 10.1080/21505594.2024.2428411
Jiewen Wang, Buwei Wang, Jian Xiao, Yuqing Chen, Chuan Wang
{"title":"<i>Chlamydia psittaci</i>: A zoonotic pathogen causing avian chlamydiosis and psittacosis.","authors":"Jiewen Wang, Buwei Wang, Jian Xiao, Yuqing Chen, Chuan Wang","doi":"10.1080/21505594.2024.2428411","DOIUrl":"10.1080/21505594.2024.2428411","url":null,"abstract":"<p><p><i>Chlamydia psittaci</i> is an obligate intracellular gram-negative bacterium with a unique biphasic developmental cycle. It is a zoonotic pathogen with a wide range of hosts and can cause avian chlamydiosis in birds and psittacosis in humans. The pathogen is transmitted mainly through horizontal transmission between birds. Cross-species transmission sometimes occurs and human-to-human transmission has recently been confirmed. This review provides an updated overview of <i>C. psittaci</i> from the perspective of both avian chlamydiosis and psittacosis. We include the aspects of genotype, host-pathogen interaction, transmission, epidemiology, detection and diagnosis, clinical manifestation, management, and prevention, aiming to provide a basic understanding of <i>C. psittaci</i> and offer fresh insights focused on zoonosis and cross-species transmission.</p>","PeriodicalId":23747,"journal":{"name":"Virulence","volume":" ","pages":"2428411"},"PeriodicalIF":5.5,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11622591/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142629290","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
VirulencePub Date : 2024-12-01Epub Date: 2024-10-29DOI: 10.1080/21505594.2023.2284513
S M Hossein Khademi, Cecilia Sahl, Lotta Happonen, Åke Forsberg, Lisa I Påhlman
{"title":"The twin-arginine translocation system is vital for cell adhesion and uptake of iron in the cystic fibrosis pathogen <i>Achromobacter xylosoxidans</i>.","authors":"S M Hossein Khademi, Cecilia Sahl, Lotta Happonen, Åke Forsberg, Lisa I Påhlman","doi":"10.1080/21505594.2023.2284513","DOIUrl":"10.1080/21505594.2023.2284513","url":null,"abstract":"<p><p><i>Achromobacter xylosoxidans</i> is an emerging pathogen that causes airway infections in patients with cystic fibrosis. Knowledge of virulence factors and protein secretion systems in this bacterium is limited. Twin arginine translocation (Tat) is a protein secretion system that transports folded proteins across the inner cell membranes of gram-negative bacteria. Tat has been shown to be important for virulence and cellular processes in many different bacterial species. This study aimed to investigate the role of Tat in iron metabolism and host cell adhesion in <i>A. xylosoxidans</i>. Putative Tat substrates in <i>A.</i> <i>xylosoxidans</i> were identified using the TatFind, TatP, and PRED-Tat prediction tools. An isogenic <i>tatC</i> deletion mutant (ΔtatC) was generated and phenotypically characterized. The wild-type and ΔtatC <i>A.</i> <i>xylosoxidans</i> were fractionated into cytosolic, membrane, and periplasmic fractions, and the expressed proteome of the different fractions was analysed using liquid chromatography-mass spectrometry (LC-MS/MS). A total of 128 putative Tat substrates were identified in the <i>A.</i> <i>xylosoxidans</i> proteome. The ΔtatC mutant showed attenuated host cell adhesion, growth rate, and iron acquisition. Twenty predicted Tat substrates were identified as expressed proteins in the periplasmic compartment, nine of which were associated with the wild type. The data indicate that Tat secretion is important for iron acquisition and host cell adhesion in <i>A.</i> <i>xylosoxidans</i>.</p>","PeriodicalId":23747,"journal":{"name":"Virulence","volume":" ","pages":"2284513"},"PeriodicalIF":5.5,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11533796/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136399456","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
VirulencePub Date : 2024-12-01Epub Date: 2024-09-24DOI: 10.1080/21505594.2024.2405616
Jiyeon Park, Shinae Park, Jueun Kim, Yong-Joon Cho, Jung-Shin Lee
{"title":"Ctr9 promotes virulence of <i>Candida albicans</i> by regulating methionine metabolism.","authors":"Jiyeon Park, Shinae Park, Jueun Kim, Yong-Joon Cho, Jung-Shin Lee","doi":"10.1080/21505594.2024.2405616","DOIUrl":"https://doi.org/10.1080/21505594.2024.2405616","url":null,"abstract":"<p><p><i>Candida albicans</i>, a part of normal flora, is an opportunistic fungal pathogen and causes severe health issues in immunocompromised patients. Its pathogenicity is intricately linked to the transcriptional regulation of its metabolic pathways. Paf1 complex (Paf1C) is a crucial transcriptional regulator that is highly conserved in eukaryotes. The objective of this study was to explore the role of Paf1C in the metabolic pathways and how it influences the pathogenicity of <i>C. albicans</i>. Paf1C knockout mutant strains of <i>C. albicans</i> (<i>ctr9</i>Δ/Δ, <i>leo1</i>Δ/Δ, and <i>cdc73</i>Δ/Δ) were generated using the CRISPR-Cas9 system. To investigate the effect of Paf1C on pathogenicity, macrophage interaction assays and mouse survival tests were conducted. The growth patterns of the Paf1C knockout mutants were analyzed through spotting assays and growth curve measurements. Transcriptome analysis was conducted under yeast conditions (30°C without serum) and hyphal conditions (37°C with 10% FBS), to further elucidate the role of Paf1C in the pathogenicity of <i>C. albicans</i>. <i>CTR9</i> deletion resulted in the attenuation of <i>C. albicans</i> virulence, in macrophage and mouse models. Furthermore, we confirmed that the reduced virulence of the <i>ctr9</i>Δ/Δ mutant can be attributed to a decrease in <i>C. albicans</i> cell abundance. Moreover, transcriptome analysis revealed that metabolic processes required for cell proliferation are impaired in <i>ctr9</i>Δ/Δ mutant. Notably, <i>CTR9</i> deletion led to the downregulation of methionine biosynthetic genes and the cAMP-PKA signaling pathway-related hypha essential genes, which are pivotal for virulence. Our results suggest that Ctr9-regulated methionine metabolism is a crucial factor for determining <i>C. albicans</i> pathogenicity.</p>","PeriodicalId":23747,"journal":{"name":"Virulence","volume":"15 1","pages":"2405616"},"PeriodicalIF":5.5,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11423685/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142355136","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
VirulencePub Date : 2024-12-01Epub Date: 2024-10-17DOI: 10.1080/21505594.2024.2411543
Tianhong Zheng, Lingyu Ji, Yi Chen, Chengjun Cao, Jian Bing, Tianren Hu, Qiushi Zheng, Dan Wu, Haiqing Chu, Guanghua Huang
{"title":"Biology and genetic diversity of <i>Candida krusei</i> isolates from fermented vegetables and clinical samples in China.","authors":"Tianhong Zheng, Lingyu Ji, Yi Chen, Chengjun Cao, Jian Bing, Tianren Hu, Qiushi Zheng, Dan Wu, Haiqing Chu, Guanghua Huang","doi":"10.1080/21505594.2024.2411543","DOIUrl":"10.1080/21505594.2024.2411543","url":null,"abstract":"<p><p><i>Candida krusei</i>, also known as <i>Pichia kudriavzevii</i>, is an emerging non-<i>albicans Candida</i> (NAC) species causing both superficial and deep-seated infections in humans. This fungal pathogen is inherently resistant to the first-line antifungal drug, fluconazole, and is widely distributed in natural environments such as soil, foods, vegetables, and fruits. In this study, we collected 86 <i>C. krusei</i> strains from clinical settings and traditional fermented vegetables from different areas of China. Compared to <i>C. krusei</i> strains from fermented vegetables, clinical isolates exhibited a higher ability to undergo filamentation and biofilm development, which could facilitate its host colonization and infections. Isolates from fermented vegetables showed higher resistance to several antifungal drugs including fluconazole, voriconazole, itraconazole, amphotericin B, and caspofungin, than clinical strains, while they were more susceptible to posaconazole than clinical strains. Although <i>C. krusei</i> has been thought to be a diploid organism, we found that one-fourth of clinical strains and the majority of isolates from fermented vegetables (87.5%) are triploid. Whole-genome sequencing and population genetic analyses demonstrated that isolates from clinical settings and fermented food are genetically associated, and distributed across a wide range of genetic clusters. Additionally, we found that six nucleotide substitutions at the promoter region of the <i>ABC11</i> gene, encoding a multidrug efflux pump, could play a critical role in antifungal resistance in this species. Given the ubiquitous distribution of <i>C. krusei</i> strains in fermented vegetables and their genetic association with clinical strains, a One Health approach will be necessary to control the prevalence of this pathogen.</p>","PeriodicalId":23747,"journal":{"name":"Virulence","volume":" ","pages":"2411543"},"PeriodicalIF":5.5,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11487970/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142366735","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}