World Journal of Microbiology and Biotechnology最新文献

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Co-production of metallo-β-lactamase and OXA-type β-lactamases in carbapenem-resistant Acinetobacter baumannii clinical isolates in North East India 印度东北部耐碳青霉烯类鲍曼不动杆菌临床分离株中金属-β-内酰胺酶和 OXA 型 β-内酰胺酶的共同产生
World Journal of Microbiology and Biotechnology Pub Date : 2024-04-17 DOI: 10.1007/s11274-024-03977-1
Shyamalima Saikia, Indrani Gogoi, Amos Oloo, Mohan Sharma, Minakshi Puzari, Pankaj Chetia
{"title":"Co-production of metallo-β-lactamase and OXA-type β-lactamases in carbapenem-resistant Acinetobacter baumannii clinical isolates in North East India","authors":"Shyamalima Saikia, Indrani Gogoi, Amos Oloo, Mohan Sharma, Minakshi Puzari, Pankaj Chetia","doi":"10.1007/s11274-024-03977-1","DOIUrl":"https://doi.org/10.1007/s11274-024-03977-1","url":null,"abstract":"<p>Carbapenem-resistant <i>Acinetobacter baumannii</i> poses a significant threat to public health globally, especially due to its ability to produce multiple carbapenemases, leading to treatment challenges. This study aimed to investigate the antibiotic resistance pattern of carbapenem-resistant <i>A. baumannii</i> isolates collected from different clinical settings in North East India, focusing on their genotypic and phenotypic resistance profiles. A total of 172 multidrug-resistant <i>A. baumannii</i> isolates were collected and subjected to antibiotic susceptibility test using the Kirby–Bauer disk diffusion method. Various phenotypic tests were performed to detect extended-spectrum β-lactamase (ESBL), metallo-β-lactamase (MBL), class C AmpC β-lactamase (AmpC), and carbapenem hydrolyzing class D β-lactamase (CHDL) production among the isolates. Overexpression of carbapenemase and cephalosporinase genes was detected among the isolates through both phenotypic and genotypic investigation. The antibiotic resistance profile of the isolates revealed that all were multidrug-resistant; 25% were extensively drug-resistant, 9.30% were pan-drug-resistant, whereas 91.27% were resistant to carbapenems. In the genotypic investigation, 80.81% of isolates were reported harbouring at least one metallo-β-lactamase encoding gene, with <i>bla</i><sub>NDM</sub> being the most prevalent at 70.34%, followed by <i>bla</i><sub>IMP</sub> at 51.16% of isolates. Regarding class D carbapenemases, <i>bla</i><sub>OXA-51</sub> and <i>bla</i><sub>OXA-23</sub> genes were detected in all the tested isolates, while <i>bla</i><sub>OXA-24,</sub> <i>bla</i><sub>OXA-48,</sub> and <i>bla</i><sub>OXA-58</sub> were found in 15.11%, 6.97%, and 1.74% isolates respectively. Further analysis showed that 31.97% of isolates co-harboured ESBL, MBL, AmpC, and CHDL genes, while 31.39% of isolates co-harboured ESBL, MBL, and CHDL genes with or without IS<i>Aba</i>1 leading to extensively drug-resistant or pan drug-resistant phenotypes. This study highlights the complex genetic profile and antimicrobial-resistant pattern of the isolates circulating in North East India, emphasizing the urgent need for effective infection control measures and the development of alternative treatment strategies to combat these challenging pathogens.</p>","PeriodicalId":23744,"journal":{"name":"World Journal of Microbiology and Biotechnology","volume":"111 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140610846","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metagenomic investigations into the microbial consortia, degradation pathways, and enzyme systems involved in the biodegradation of plastics in a tropical lentic pond sediment 对热带泻湖沉积物中塑料生物降解所涉及的微生物群落、降解途径和酶系统的元基因组研究
World Journal of Microbiology and Biotechnology Pub Date : 2024-04-17 DOI: 10.1007/s11274-024-03972-6
Lateef B. Salam
{"title":"Metagenomic investigations into the microbial consortia, degradation pathways, and enzyme systems involved in the biodegradation of plastics in a tropical lentic pond sediment","authors":"Lateef B. Salam","doi":"10.1007/s11274-024-03972-6","DOIUrl":"https://doi.org/10.1007/s11274-024-03972-6","url":null,"abstract":"<p>The exploitation of exciting features of plastics for diverse applications has resulted in significant plastic waste generation, which negatively impacts environmental compartments, metabolic processes, and the well-being of aquatic ecosystems biota. A shotgun metagenomic approach was deployed to investigate the microbial consortia, degradation pathways, and enzyme systems involved in the degradation of plastics in a tropical lentic pond sediment (APS). Functional annotation of the APS proteome (ORFs) using the PlasticDB database revealed annotation of 1015 proteins of enzymes such as depolymerase, esterase, lipase, hydrolase, nitrobenzylesterase, chitinase, carboxylesterase, polyesterase, oxidoreductase, polyamidase, PETase, MHETase, laccase, alkane monooxygenase, among others involved in the depolymerization of the plastic polymers. It also revealed that polyethylene glycol (PEG), polyhydroxyalkanoates (PHA), polyhydroxybutyrate (PHB), polylactic acid (PLA), polybutylene adipate terephthalate (PBAT), polyethylene terephthalate (PET), and nylon have the highest number of annotated enzymes. Further annotation using the KEGG GhostKOALA revealed that except for terephthalate, all the other degradation products of the plastic polymers depolymerization such as glyoxylate, adipate, succinate, 1,4-butanediol, ethylene glycol, lactate, and acetaldehyde were further metabolized to intermediates of the tricarboxylic acid cycle. Taxonomic characterization of the annotated proteins using the AAI Profiler and BLASTP revealed that <i>Pseudomonadota</i> members dominate most plastic types, followed by <i>Actinomycetota</i> and <i>Acidobacteriota</i>. The study reveals novel plastic degraders from diverse phyla hitherto not reported to be involved in plastic degradation. This suggests that plastic pollution in aquatic environments is prevalent with well-adapted degrading communities and could be the silver lining in mitigating the impacts of plastic pollution in aquatic environments.</p>","PeriodicalId":23744,"journal":{"name":"World Journal of Microbiology and Biotechnology","volume":"24 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140610168","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Growth-dependent cr(VI) reduction by Alteromonas sp. ORB2 under haloalkaline conditions: toxicity, removal mechanism and effect of heavy metals Alteromonas sp. ORB2 在卤碱性条件下依赖生长还原 Cr(VI):毒性、去除机制和重金属的影响
World Journal of Microbiology and Biotechnology Pub Date : 2024-04-17 DOI: 10.1007/s11274-024-03982-4
G. Kiran Kumar Reddy, K. Kavibharathi, Anuroop Singh, Y. V. Nancharaiah
{"title":"Growth-dependent cr(VI) reduction by Alteromonas sp. ORB2 under haloalkaline conditions: toxicity, removal mechanism and effect of heavy metals","authors":"G. Kiran Kumar Reddy, K. Kavibharathi, Anuroop Singh, Y. V. Nancharaiah","doi":"10.1007/s11274-024-03982-4","DOIUrl":"https://doi.org/10.1007/s11274-024-03982-4","url":null,"abstract":"<p>Bacterial reduction of hexavalent chromium (VI) to chromium (III) is a sustainable bioremediation approach. However, the Cr(VI) containing wastewaters are often characterized with complex conditions such as high salt, alkaline pH and heavy metals which severely impact the growth and Cr(VI) reduction potential of microorganisms. This study investigated Cr(VI) reduction under complex haloalkaline conditions by an <i>Alteromonas</i> sp. ORB2 isolated from aerobic granular sludge cultivated from the seawater-microbiome. Optimum growth of <i>Alteromonas</i> sp. ORB2 was observed under haloalkaline conditions at 3.5–9.5% NaCl and pH 7–11. The bacterial growth in normal culture conditions (3.5% NaCl; pH 7.6) was not inhibited by 100 mg/l Cr(VI)/ As(V)/ Pb(II), 50 mg/l Cu(II) or 5 mg/l Cd(II). Near complete reduction of 100 mg/l Cr(VI) was achieved within 24 h at 3.5–7.5% NaCl and pH 8–11. Cr(VI) reduction by <i>Alteromonas </i>sp. ORB2 was not inhibited by 100 mg/L As(V), 100 mg/L Pb(II), 50 mg/L Cu(II) or 5 mg/L Cd(II). The bacterial cells grew in the medium with 100 mg/l Cr(VI) contained lower esterase activity and higher reactive oxygen species levels indicating toxicity and oxidative stress. In-spite of toxicity, the cells grew and reduced 100 mg/l Cr(VI) completely within 24 h. Cr(VI) removal from the medium was driven by bacterial reduction to Cr(III) which remained in the complex medium. Cr(VI) reduction was strongly linked to aerobic growth of <i>Alteromonas</i> sp. The Cr(VI) reductase activity of cytosolic protein fraction was pronounced by supplementing with NADPH in vitro assays. This study demonstrated a growth-dependent aerobic Cr(VI) reduction by <i>Alteromonas</i> sp. ORB2 under complex haloalkaline conditions akin to wastewaters.</p>","PeriodicalId":23744,"journal":{"name":"World Journal of Microbiology and Biotechnology","volume":"24 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140610171","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advances in biotin biosynthesis and biotechnological production in microorganisms 生物素生物合成和微生物生物技术生产方面的进展
World Journal of Microbiology and Biotechnology Pub Date : 2024-04-13 DOI: 10.1007/s11274-024-03971-7
Jia-Run Zhao, Si-Qi Zuo, Feng Xiao, Feng-Zhu Guo, Lu-Yi Chen, Ke Bi, Dong-Yuan Cheng, Zhi-Nan Xu
{"title":"Advances in biotin biosynthesis and biotechnological production in microorganisms","authors":"Jia-Run Zhao, Si-Qi Zuo, Feng Xiao, Feng-Zhu Guo, Lu-Yi Chen, Ke Bi, Dong-Yuan Cheng, Zhi-Nan Xu","doi":"10.1007/s11274-024-03971-7","DOIUrl":"https://doi.org/10.1007/s11274-024-03971-7","url":null,"abstract":"<p>Biotin, also known as vitamin H or B<sub>7</sub>, acts as a crucial cofactor in the central metabolism processes of fatty acids, amino acids, and carbohydrates. Biotin has important applications in food additives, biomedicine, and other fields. While the ability to synthesize biotin <i>de novo</i> is confined to microorganisms and plants, humans and animals require substantial daily intake, primarily through dietary sources and intestinal microflora. Currently, chemical synthesis stands as the primary method for commercial biotin production, although microbial biotin production offers an environmentally sustainable alternative with promising prospects. This review presents a comprehensive overview of the pathways involved in <i>de novo</i> biotin synthesis in various species of microbes and insights into its regulatory and transport systems. Furthermore, diverse strategies are discussed to improve the biotin production here, including mutation breeding, rational metabolic engineering design, artificial genetic modification, and process optimization. The review also presents the potential strategies for addressing current challenges for industrial-scale bioproduction of biotin in the future. This review is very helpful for exploring efficient and sustainable strategies for large-scale biotin production.</p>","PeriodicalId":23744,"journal":{"name":"World Journal of Microbiology and Biotechnology","volume":"36 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-04-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140590426","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Recent advances in the use of Trichoderma-containing multicomponent microbial inoculants for pathogen control and plant growth promotion 利用含毛霉菌的多组分微生物接种剂控制病原体和促进植物生长的最新进展
World Journal of Microbiology and Biotechnology Pub Date : 2024-04-13 DOI: 10.1007/s11274-024-03965-5
László Kredics, Rita Büchner, Dóra Balázs, Henrietta Allaga, Orsolya Kedves, Gordana Racić, András Varga, Viktor Dávid Nagy, Csaba Vágvölgyi, György Sipos
{"title":"Recent advances in the use of Trichoderma-containing multicomponent microbial inoculants for pathogen control and plant growth promotion","authors":"László Kredics, Rita Büchner, Dóra Balázs, Henrietta Allaga, Orsolya Kedves, Gordana Racić, András Varga, Viktor Dávid Nagy, Csaba Vágvölgyi, György Sipos","doi":"10.1007/s11274-024-03965-5","DOIUrl":"https://doi.org/10.1007/s11274-024-03965-5","url":null,"abstract":"<p>Chemical pesticides and fertilizers are used in agricultural production worldwide to prevent damage from plant pathogenic microorganisms, insects, and nematodes, to minimize crop losses and to preserve crop quality. However, the use of chemical pesticides and fertilizers can severely pollute soil, water, and air, posing risks to the environment and human health. Consequently, developing new, alternative, environment-friendly microbial soil treatment interventions for plant protection and crop yield increase has become indispensable. Members of the filamentous fungal genus <i>Trichoderma</i> (Ascomycota, Sordariomycetes, Hypocreales) have long been known as efficient antagonists of plant pathogenic microorganisms based on various beneficial traits and abilities of these fungi. This minireview aims to discuss the advances in the field of <i>Trichoderma</i>-containing multicomponent microbiological inoculants based on recent experimental updates. <i>Trichoderma</i> strains can be combined with each other, with other fungi and/or with beneficial bacteria. The development and field performance of such inoculants will be addressed, focusing on the complementarity, synergy, and compatibility of their microbial components.</p>","PeriodicalId":23744,"journal":{"name":"World Journal of Microbiology and Biotechnology","volume":"55 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-04-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140602698","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Influence of flavonoids from Sedum aizoon L. on mitochondrial function of Rhizopus nigricans in strawberry 景天科植物黄酮对草莓根瘤菌线粒体功能的影响
World Journal of Microbiology and Biotechnology Pub Date : 2024-04-13 DOI: 10.1007/s11274-024-03967-3
Qingqing Ge, Shiyi Zhao, Xingfeng Shao, Yingying Wei, Jiahui Chen, Hongfei Wang, Feng Xu
{"title":"Influence of flavonoids from Sedum aizoon L. on mitochondrial function of Rhizopus nigricans in strawberry","authors":"Qingqing Ge, Shiyi Zhao, Xingfeng Shao, Yingying Wei, Jiahui Chen, Hongfei Wang, Feng Xu","doi":"10.1007/s11274-024-03967-3","DOIUrl":"https://doi.org/10.1007/s11274-024-03967-3","url":null,"abstract":"<p><i>Rhizopus nigricans (R. nigricans)</i>, one of the fungi that grows the fastest, is frequently discovered in postharvest fruits, it’s the main pathogen of strawberry root rot. Flavonoids in <i>Sedum aizoon</i> L. (FSAL) is a kind of green and safe natural substance extracted from <i>Sedum aizoon</i> L. which has antifungal activity. In this study, the minimum inhibitory concentration (MIC) of FSAL on <i>R. nigricans</i> and cell apoptosis tests were studied to explore the inhibitory effect of FSAL on <i>R. nigricans</i>. The effects of FSAL on mitochondria of <i>R. nigricans</i> were investigated through the changes of mitochondrial permeability transition pore(mPTP), mitochondrial membrane potential(MMP), Ca<sup>2+</sup> content, H<sub>2</sub>O<sub>2</sub> content, cytochrome <i>c</i> (<i>Cyt c</i>) content, the related enzyme activity and related genes of mitochondria. The results showed that the MIC of FSAL on <i>R. nigricans</i> was 1.800 mg/mL, with the addition of FSAL (1.800 mg/mL), the mPTP openness of <i>R. nigricans</i> increased and the MMP reduced. Resulting in an increase in Ca<sup>2+</sup> content, accumulation of H<sub>2</sub>O<sub>2</sub> content and decrease of <i>Cyt c</i> content, the activity of related enzymes was inhibited and related genes were up-regulated (<i>VDAC1, ANT</i>) or down-regulated (<i>SDHA, NOX2</i>). This suggests that FSAL may achieve the inhibitory effect of fungi by damaging mitochondria, thereby realizing the postharvest freshness preservation of strawberries. This lays the foundation for the development of a new plant-derived antimicrobial agent.</p>","PeriodicalId":23744,"journal":{"name":"World Journal of Microbiology and Biotechnology","volume":"24 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-04-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140590697","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Microbial chassis design and engineering for production of gamma-aminobutyric acid 生产γ-氨基丁酸的微生物底盘设计和工程学
World Journal of Microbiology and Biotechnology Pub Date : 2024-04-12 DOI: 10.1007/s11274-024-03951-x
Jianli Wang, Wenjian Ma, Jingwen Zhou, Xiaoyuan Wang, Lei Zhao
{"title":"Microbial chassis design and engineering for production of gamma-aminobutyric acid","authors":"Jianli Wang, Wenjian Ma, Jingwen Zhou, Xiaoyuan Wang, Lei Zhao","doi":"10.1007/s11274-024-03951-x","DOIUrl":"https://doi.org/10.1007/s11274-024-03951-x","url":null,"abstract":"<p>Gamma-aminobutyric acid (GABA) is a non-protein amino acid which is widely applied in agriculture and pharmaceutical additive industries. GABA is synthesized from glutamate through irreversible α-decarboxylation by glutamate decarboxylase. Recently, microbial synthesis has become an inevitable trend to produce GABA due to its sustainable characteristics. Therefore, reasonable microbial platform design and metabolic engineering strategies for improving production of GABA are arousing a considerable attraction. The strategies concentrate on microbial platform optimization, fermentation process optimization, rational metabolic engineering as key metabolic pathway modification, promoter optimization, site-directed mutagenesis, modular transporter engineering, and dynamic switch systems application. In this review, the microbial producers for GABA were summarized, including lactic acid bacteria, <i>Corynebacterium glutamicum</i>, and <i>Escherichia coli</i>, as well as the efficient strategies for optimizing them to improve the production of GABA.</p>","PeriodicalId":23744,"journal":{"name":"World Journal of Microbiology and Biotechnology","volume":"215 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-04-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140590508","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Strategies for the efficient biosynthesis of β-carotene through microbial fermentation 通过微生物发酵高效生物合成β-胡萝卜素的策略
World Journal of Microbiology and Biotechnology Pub Date : 2024-04-12 DOI: 10.1007/s11274-024-03955-7
Jingnan Wang, Wenqi Ma, Weixu Ma, Zhanyang Fang, Yujia Jiang, Wankui Jiang, Xiangping Kong, Fengxue Xin, Wenming Zhang, Min Jiang
{"title":"Strategies for the efficient biosynthesis of β-carotene through microbial fermentation","authors":"Jingnan Wang, Wenqi Ma, Weixu Ma, Zhanyang Fang, Yujia Jiang, Wankui Jiang, Xiangping Kong, Fengxue Xin, Wenming Zhang, Min Jiang","doi":"10.1007/s11274-024-03955-7","DOIUrl":"https://doi.org/10.1007/s11274-024-03955-7","url":null,"abstract":"<p>β-Carotene is an orange fat-soluble compound, which has been widely used in fields such as food, medicine and cosmetics owing to its anticancer, antioxidant and cardiovascular disease prevention properties. Currently, natural β-carotene is mainly extracted from plants and algae, which cannot meet the growing market demand, while chemical synthesis of β-carotene cannot satisfy the pursuit for natural products of consumers. The β-carotene production through microbial fermentation has become a promising alternative owing to its high efficiency and environmental friendliness. With the rapid development of synthetic biology and in-depth study on the synthesis pathway of β-carotene, microbial fermentation has shown promising applications in the β-carotene synthesis. Accordingly, this review aims to summarize the research progress and strategies of natural carotenoid producing strain and metabolic engineering strategies in the heterologous synthesis of β-carotene by engineered microorganisms. Moreover, it also summarizes the adoption of inexpensive carbon sources to synthesize β-carotene as well as proposes new strategies that can further improve the β-carotene production.</p>","PeriodicalId":23744,"journal":{"name":"World Journal of Microbiology and Biotechnology","volume":"53 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-04-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140590701","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Analysis of the bacterial diversity in Moroccan Jben cheese using TTGE, DGGE, and 16S rRNA sequencing 利用 TTGE、DGGE 和 16S rRNA 测序分析摩洛哥 Jben 奶酪中的细菌多样性
World Journal of Microbiology and Biotechnology Pub Date : 2024-04-09 DOI: 10.1007/s11274-024-03964-6
Safae Azzouz, Soumaya Ahadaf, Said Zantar, Ouiam El Galiou, Abdelhay Arakrak, Mohammed Bakkali, Amin Laglaoui
{"title":"Analysis of the bacterial diversity in Moroccan Jben cheese using TTGE, DGGE, and 16S rRNA sequencing","authors":"Safae Azzouz, Soumaya Ahadaf, Said Zantar, Ouiam El Galiou, Abdelhay Arakrak, Mohammed Bakkali, Amin Laglaoui","doi":"10.1007/s11274-024-03964-6","DOIUrl":"https://doi.org/10.1007/s11274-024-03964-6","url":null,"abstract":"<p>This research investigated the physicochemical, microbiological, and bacterial diversity of Jben cheese, a popular artisanal variety in Morocco. The bacterial diversity was explored using culture-independent methods, including temporal temperature gel electrophoresis (TTGE), denaturing gradient gel electrophoresis (DGGE), and high-throughput sequencing (HTS). Significant intra-sample differences were observed for most physicochemical parameters within each milk type, while inter-sample differences occurred between cow and goat cheeses for dry matter and ash. Jben cheese exhibited distinct characteristics, with low pH values of 3.96, 4.16, and 4.18 for cow, goat, and mixed cheeses, respectively. Goat cheeses had higher fat (49.23 g/100 g), ash (1.91 g/100 g), and dry matter (36.39 g/100 g) than cow cheeses. All cheeses displayed high microbial counts, with a notable prevalence of the lactic acid bacteria (LAB) group, averaging 8.80 ± 0.92 log CFU/g. Jben cheese also displayed high contamination levels with total coliforms, faecal coliforms, yeast, and molds. Fatty acid profiling revealed fraudulent practices in Jben cheese marketing, with cow or mixed cheeses sold as goat cheese, as proven by low capric acid concentration. HTS analysis of Jben cheese identified ten genera and twenty-four species, highlighting <i>Lactococcus lactis</i> as predominant. TTGE and DGGE confirmed the presence of <i>L. lactis</i> but failed to provide the detailed profile achieved through HTS analysis. HTS has been demonstrated to be more reliable, whereas TTGE/DGGE methods, though informative, were more time-consuming and less reliable. Despite limitations, the combined use of TTGE, DGGE, and HTS provided a comprehensive view of indigenous bacterial communities in Jben cheese, identifying <i>L. lactis</i> as the main species.</p>","PeriodicalId":23744,"journal":{"name":"World Journal of Microbiology and Biotechnology","volume":"215 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-04-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140590615","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis of bio-stabilized silver nanoparticles using Roccella montagnei, their anticandidal capacities & potential to inhibit the virulence factors in fluconazole-resistant Candida albicans 利用蒙大拿洛可菌合成生物稳定银纳米粒子及其抗念珠菌能力和抑制耐氟康唑白色念珠菌毒力因子的潜力
World Journal of Microbiology and Biotechnology Pub Date : 2024-04-09 DOI: 10.1007/s11274-024-03928-w
Shweta Bharti, Balwant Singh, Sanket Kumar, Rajesh Kumar, Jatinder Kumar
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