Reviews in Aquaculture最新文献

{"title":"Genome Manipulation Advances in Selected Aquaculture Organisms","authors":"Jinhai Wang, Yu Cheng, Baofeng Su, Rex A. Dunham","doi":"10.1111/raq.12988","DOIUrl":"https://doi.org/10.1111/raq.12988","url":null,"abstract":"With the rising global demand for seafood and the challenges posed by overfishing and climate change, the aquaculture sector has become increasingly important in providing high-quality protein for human consumption. Although traditional selection breeding programs have made great strides in genetic improvement of aquaculture species over the past decades, faster and more precise breeding tools, such as genome manipulation, are needed for performance enhancement of aquaculture stock. This review presents a comprehensive overview of the current status of three major genome manipulation tools, including RNA interference (RNAi), gene transfer, and genome editing in aquaculture species, and discusses the advances made, challenges faced, and potential future directions of this fast-developing field. Taking catfish as an example, this paper reviews the specific applications of these techniques to improve traits such as growth, disease resistance, reproduction, and nutritional profiles in various commercially important fishes and crustaceans, highlighting successful applications and ongoing research efforts. We also propose CRISPR/Cas9-mediated multiplex genome editing for the knockout or replacement of multiple genes in parallel to improve multiple traits in fish. Collectively, this review provides insights into the evolving landscape of genome manipulation in aquaculture and sheds light on its implications for sustainable practices and responsible innovation.","PeriodicalId":227,"journal":{"name":"Reviews in Aquaculture","volume":"128 1","pages":""},"PeriodicalIF":10.4,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142642550","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Circular bio-economy in aquaculture","authors":"Johan A. J. Verreth, Koushik Roy, Giovanni M. Turchini","doi":"10.1111/raq.12812","DOIUrl":"https://doi.org/10.1111/raq.12812","url":null,"abstract":"<p>The way we produce our food is increasingly scrutinized and evaluated on its possible contribution to the global environmental changes the world is currently witnessing. Scientific evidence about the negative effects of agriculture (including aquaculture) on the world's natural resources<span><sup>1-5</sup></span> is mounting. Food production is considered as one of the most significant causes of environmental change.<span><sup>6, 7</sup></span> The planetary boundaries framework<span><sup>8, 9</sup></span> offers a tool to explore to which extent we are still operating within the carrying capacity of our planet. In its most recent update,<span><sup>10, 11</sup></span> six out of the nine boundaries were transgressed already. Even novel planetary health threats such as microplastics are emerging.<span><sup>12, 13</sup></span> Obviously, the current bio-economy needs to be revisited to remain within ‘safe operating space for the future of mankind’. A change to a circular bio-based economy focusing on resource use efficiency and minimizing environmental impacts might be one of the most prospective strategies to achieve that goal.</p><p>Muscat et al.<span><sup>14</sup></span> presented five principles to transform agro-food systems into a circular bio-economy, for example, safeguarding the health of agro-ecosystems, avoiding waste, prioritizing the use of biomass to avoid a food–feed–fuel competition, recycling by-products and using renewable energy. Products and/or production systems are designed in such a way that they minimize their impact on the environment during their whole lifetime. European Commission, Directorate-General for Maritime Affairs and Fisheries, et al.<span><sup>15</sup></span> and Colombo and Turchini<span><sup>16</sup></span> transferred this idea to the area of fisheries and aquaculture and presented a framework for a circular economy, focusing on the conceptualization and design of new appropriate production systems, evaluating the possible reuse of wastes and by-products from fisheries/aquaculture, reducing the impact of equipment and products from the sector and exploring possibilities to recycle. It all relates to the so-called three Rs, for example, reduce, reuse, recycle.</p><p><i>Reviews in Aquaculture</i> contributed already to the discourse on circularity in aquaculture. Roy et al.<span><sup>17</sup></span> provided a virtual topical collection of 13 review articles published by <i>Reviews in Aquaculture</i> between 2020 and 2021, which together reflected some of the contemporary puzzles of circularity in aquaculture. Following a virtual special issue (here), the journal decided to initiate a physical special issue entitled ‘Circular Bio-economy Framework in Aquaculture’, which we proudly present today.</p><p>The special issue was organized around the four key processes in circularity, for example, designing new (circular) aquacultural production systems, reducing the impact of aquaculture, re-using wastes and by-p","PeriodicalId":227,"journal":{"name":"Reviews in Aquaculture","volume":"15 3","pages":"944-946"},"PeriodicalIF":10.4,"publicationDate":"2023-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/raq.12812","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6057810","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Chinese abstracts","authors":"","doi":"10.1111/raq.12574","DOIUrl":"https://doi.org/10.1111/raq.12574","url":null,"abstract":"","PeriodicalId":227,"journal":{"name":"Reviews in Aquaculture","volume":"15 3","pages":"1235-1240"},"PeriodicalIF":10.4,"publicationDate":"2023-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/raq.12574","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"5670158","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Portuguese-Brazilian abstracts","authors":"","doi":"10.1111/raq.12834","DOIUrl":"https://doi.org/10.1111/raq.12834","url":null,"abstract":"","PeriodicalId":227,"journal":{"name":"Reviews in Aquaculture","volume":"15 3","pages":"1241-1248"},"PeriodicalIF":10.4,"publicationDate":"2023-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/raq.12834","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6061186","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Arabic Abstracts","authors":"","doi":"10.1111/raq.12828","DOIUrl":"https://doi.org/10.1111/raq.12828","url":null,"abstract":"","PeriodicalId":227,"journal":{"name":"Reviews in Aquaculture","volume":"15 3","pages":"1227-1234"},"PeriodicalIF":10.4,"publicationDate":"2023-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/raq.12828","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6034588","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Spanish abstracts","authors":"","doi":"10.1111/raq.12826","DOIUrl":"https://doi.org/10.1111/raq.12826","url":null,"abstract":"","PeriodicalId":227,"journal":{"name":"Reviews in Aquaculture","volume":"15 3","pages":"1249-1256"},"PeriodicalIF":10.4,"publicationDate":"2023-05-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/raq.12826","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"5715811","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Circular and lower impact mussel and seaweed aquaculture by a shift towards bio-based ropes","authors":"Leire Arantzamendi,&nbsp;Marga Andrés,&nbsp;Oihane C. Basurko,&nbsp;María José Suárez","doi":"10.1111/raq.12816","DOIUrl":"https://doi.org/10.1111/raq.12816","url":null,"abstract":"<p>Worldwide, current mussel and seaweed aquaculture practices contribute to the increase of fossil fuel-based plastic gears at sea, leading to marine litter and microplastics generation. Smart aquaculture has a great potential for shifting towards the use of lower impact bio-based and biodegradable gears. This review defines the value chain of biogears as more sustainable gears for mussel and seaweed aquaculture, and sustainability issues covering technology, environmental impacts, economy-market, policy, and social drivers for their potential implementation. Fit to purpose durability and functionality attributes, end-of-life (EoL) options and environmental benefits are key features for competitiveness of biogears versus conventional fossil fuel-based aquaculture gears. EoL management for collection, sorting and logistics of biogears to recycling facilities is needed for the up cycling of bio-based materials thus ensuring application of principles of circularity. The selection of the biopolymers for recyclability, improvement of the polymerisation and recycling processes together with the enhanced deployment of recycling facilities are considered as key factors for eco-designing of circular biogears. Current policies supporting bio-based plastics in marine applications and social benefits, as environmental sustainability, healthy products, and circular business opportunities, are likewise added value for the development and use of biogears. Overall, biogears can reduce environmental negative impacts in mussel and seaweed productions, while enabling circular use of bio-based materials and sustainable circular bioeconomy.</p>","PeriodicalId":227,"journal":{"name":"Reviews in Aquaculture","volume":"15 3","pages":"1010-1019"},"PeriodicalIF":10.4,"publicationDate":"2023-03-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/raq.12816","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6088515","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Feed-food competition in global aquaculture: Current trends and prospects","authors":"Anne-Jo van Riel,&nbsp;Marit A. J. Nederlof,&nbsp;Killian Chary,&nbsp;Geert F. Wiegertjes,&nbsp;Imke J. M. de Boer","doi":"10.1111/raq.12804","DOIUrl":"https://doi.org/10.1111/raq.12804","url":null,"abstract":"<p>Feed-food competition is the allocation of resources that can be used to feed humans to animal feed instead, a current but unsustainable practise not well documented for aquaculture. Here, we analysed feed-food competition in aquaculture using two measures; natural trophic levels (TLs) and species-specific human-edible protein conversion ratios (HePCRs). The HePCR equals the ratio of human edible protein in feed (input) to the human edible protein in animal produce (output). To provide prospects on aquaculture's potential to convert human inedible by-products into edible biomass, data on aquaculture production were collected and categorized based on natural TLs. HePCRs were computed for four aquaculture species produced in intensive aquaculture systems: Atlantic salmon, common carp, Nile tilapia and whiteleg shrimp. Under current feed use, we estimated that the carp, tilapia and shrimp considered were net contributors of protein by requiring ~0.6 kg of human edible protein to produce 1 kg of protein in the fillet/meat. Considering soya bean meal and fishmeal as food-competing ingredients increased the HePCR to ~2 and turned all of the case-study species into net consumers of protein. To prevent this increase, the use of high-quality food-competing ingredients such as fishmeal, or soya bean products should be minimized in aquaculture feed. In the future, the role of aquaculture in circular food systems will most likely consist of a balanced mix of species at different TLs and from different aquaculture systems, depending on the by-products available.</p>","PeriodicalId":227,"journal":{"name":"Reviews in Aquaculture","volume":"15 3","pages":"1142-1158"},"PeriodicalIF":10.4,"publicationDate":"2023-03-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/raq.12804","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6105391","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Bacterial diseases of tilapia, their zoonotic potential and risk of antimicrobial resistance","authors":"Olga L. M. Haenen,&nbsp;Ha Thanh Dong,&nbsp;Truong Dinh Hoai,&nbsp;Margaret Crumlish,&nbsp;Iddya Karunasagar,&nbsp;Timothy Barkham,&nbsp;Swaine L. Chen,&nbsp;Ruth Zadoks,&nbsp;Andreas Kiermeier,&nbsp;Bing Wang,&nbsp;Esther Garrido Gamarro,&nbsp;Masami Takeuchi,&nbsp;Mohammad Noor Amal Azmai,&nbsp;Belén Fouz,&nbsp;Rolando Pakingking Jr.,&nbsp;Zeng Wei Wei,&nbsp;Melba G. Bondad-Reantaso","doi":"10.1111/raq.12743","DOIUrl":"https://doi.org/10.1111/raq.12743","url":null,"abstract":"<p>Tilapia culture is an important source of income and nutrition to many rural families. Since 2000, the production of tilapia increased and reached domestic and global markets. Major farmed species is Nile tilapia (<i>Oreochromis niloticus</i>), in earthen ponds and cage cultures. Intensification contributed to global tilapia disease outbreaks, with bacterial infections causing mortalities and morbidities, threatening sustainable production. At tilapia farms, high nutrient concentrations, water temperature and fish densities enhance bacterial growth including virulent bacterial clones and potential zoonotic bacteria. Global warming favours this. This review respectively provides a comprehensive overview of the most common and emerging bacterial pathogens, diseases, clinical presentations and diagnostics of tilapia, including bacteria and diseases with zoonotic potential. First, common bacterial disease outbreaks, including streptococcosis, motile <i>Aeromonas</i> septicaemia, francisellosis, columnaris disease and vibriosis are described. Then, information on emerging bacterial infections of concern for tilapia, like edwardsiellosis through <i>Edwardsiella ictaluri</i> and <i>E</i>. <i>tarda</i>, as well as <i>Aeromonas schubertii</i> is provided. Reports of infectious bacterial tilapia disease outbreaks from other bacteria, including <i>Lactococcus garvieae</i>, <i>Aerococcus viridans</i>, <i>Pseudomonas</i> spp., <i>Mycobacterium marinum</i> and <i>Chlamydia</i> spp., and others are reviewed. Furthermore, bacteria with zoonotic potential, like <i>Streptococcus agalactiae</i> ST283, <i>S</i>. <i>iniae</i>, <i>Aeromonas</i> sp., <i>E</i>. <i>tarda</i>, <i>Vibrio vulnificus</i> pathovar (pv) <i>piscis</i> and <i>M</i>. <i>marinum</i> are included in the review, to provide the most current overview of the disease risks affecting production and post-harvest stages. Additionally, the status and risks of antimicrobial resistance in bacteria from tilapia and other cultured fish through imprudent use of antibiotics, and its future at a global level are provided.</p>","PeriodicalId":227,"journal":{"name":"Reviews in Aquaculture","volume":"15 S1","pages":"154-185"},"PeriodicalIF":10.4,"publicationDate":"2023-03-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/raq.12743","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"5986422","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"A global review of problematic and pathogenic parasites of farmed tilapia","authors":"Andrew P. Shinn,&nbsp;Annemarie Avenant-Oldewage,&nbsp;Melba G. Bondad-Reantaso,&nbsp;Armando J. Cruz-Laufer,&nbsp;Adriana García-Vásquez,&nbsp;Jesús S. Hernández-Orts,&nbsp;Roman Kuchta,&nbsp;Matt Longshaw,&nbsp;Matthijs Metselaar,&nbsp;Antoine Pariselle,&nbsp;Gerardo Pérez-Ponce de León,&nbsp;Pravata Kumar Pradhan,&nbsp;Miguel Rubio-Godoy,&nbsp;Neeraj Sood,&nbsp;Maarten P. M. Vanhove,&nbsp;Marty R. Deveney","doi":"10.1111/raq.12742","DOIUrl":"https://doi.org/10.1111/raq.12742","url":null,"abstract":"<p>Over the past 80 years, tilapia have been translocated globally for aquaculture; active production is recorded in &gt;124 countries. Of 7 million tonnes of tilapia produced in aquaculture, 79% is from 79 countries outside the natural range of tilapia. Capture fisheries account for a further 723,627 tonnes of tilapia, and &gt;47% of this is landed from established invasive populations outside Africa. Tilapias host a rich fauna of parasites, many of which have been translocated with their hosts. This review summarises &gt;2500 host–parasite records from 73+ countries and &gt;820 recorded tilapia translocations (provided in the supplementary materials). This work focuses on the notable pathogens that threaten the health of cultured populations of tilapia, providing a description of their pathology and includes species that also have substantial impacts on wild tilapia populations, where relevant. For each major parasite taxonomic group, we highlight which parasites have been translocated or have been acquired from the new environments into which tilapia have been introduced, together with remarks on standard treatment approaches and research on them and their management and control. Regarding the theme ‘Tilapia health: <i>quo vadis</i>?’, Africa has enormous potential for aquaculture growth, but substantial knowledge gaps about tilapia parasites in many African states remain, which creates associated production and biosecurity risks. For each parasitic group, therefore, the risks of parasite translocation to new regions as tilapia aquaculture industries expand are highlighted.</p>","PeriodicalId":227,"journal":{"name":"Reviews in Aquaculture","volume":"15 S1","pages":"92-153"},"PeriodicalIF":10.4,"publicationDate":"2023-03-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/raq.12742","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"5986425","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}