Physiologia plantarum最新文献

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Long-read RNA-Seq for the discovery of long noncoding and antisense RNAs in plant organelles. 用于发现植物细胞器中长非编码 RNA 和反义 RNA 的长读程 RNA 序列。
IF 5.4 2区 生物学
Physiologia plantarum Pub Date : 2024-07-01 DOI: 10.1111/ppl.14418
Matheus Sanita Lima, Douglas Silva Domingues, Alexandre Rossi Paschoal, David Roy Smith
{"title":"Long-read RNA-Seq for the discovery of long noncoding and antisense RNAs in plant organelles.","authors":"Matheus Sanita Lima, Douglas Silva Domingues, Alexandre Rossi Paschoal, David Roy Smith","doi":"10.1111/ppl.14418","DOIUrl":"10.1111/ppl.14418","url":null,"abstract":"<p><p>Plant organelle transcription has been studied for decades. As techniques advanced, so did the fields of mitochondrial and plastid transcriptomics. The current view is that organelle genomes are pervasively transcribed, irrespective of their size, content, structure, and taxonomic origin. However, little is known about the nature of organelle noncoding transcriptomes, including pervasively transcribed noncoding RNAs (ncRNAs). Next-generation sequencing data have uncovered small ncRNAs in the organelles of plants and other organisms, but long ncRNAs remain poorly understood. Here, we argue that publicly available third-generation long-read RNA sequencing data from plants can provide a fine-tuned picture of long ncRNAs within organelles. Indeed, given their bloated architectures, plant mitochondrial genomes are well suited for studying pervasive transcription of ncRNAs. Ultimately, we hope to showcase this new avenue of plant research while also underlining the limitations of the proposed approach.</p>","PeriodicalId":20164,"journal":{"name":"Physiologia plantarum","volume":null,"pages":null},"PeriodicalIF":5.4,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141617034","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
C4 monocots and C4 dicots exhibit rapid photosynthetic induction response in contrast to C3 plants. 与 C3 植物相比,C4 单子叶植物和 C4 双子叶植物表现出快速的光合诱导反应。
IF 5.4 2区 生物学
Physiologia plantarum Pub Date : 2024-07-01 DOI: 10.1111/ppl.14431
Keiichiro Tanigawa, Qu Yuchen, Naoya Katsuhama, Kazuma Sakoda, Yu Wakabayashi, Yu Tanaka, Rowan Sage, Tracy Lawson, Wataru Yamori
{"title":"C<sub>4</sub> monocots and C<sub>4</sub> dicots exhibit rapid photosynthetic induction response in contrast to C<sub>3</sub> plants.","authors":"Keiichiro Tanigawa, Qu Yuchen, Naoya Katsuhama, Kazuma Sakoda, Yu Wakabayashi, Yu Tanaka, Rowan Sage, Tracy Lawson, Wataru Yamori","doi":"10.1111/ppl.14431","DOIUrl":"https://doi.org/10.1111/ppl.14431","url":null,"abstract":"<p><p>Considering the prevalence of ever-changing conditions in the natural world, investigation of photosynthetic responses in C<sub>4</sub> plants under fluctuating light is needed. Here, we studied the effect of dynamic illumination on photosynthesis in totally 10 C<sub>3</sub>, C<sub>3</sub>-C<sub>4</sub> intermediate, C<sub>4</sub>-like and C<sub>4</sub> dicots and monocots at CO<sub>2</sub> concentrations of 400 and 800 μmol mol<sup>-1</sup>. C<sub>4</sub> and C<sub>4</sub>-like plants had faster photosynthetic induction and light-induced stomatal dynamics than C<sub>3</sub> plants at 400 μmol mol<sup>-1</sup>, but not at 800 μmol mol<sup>-1</sup> CO<sub>2</sub>, at which the CO<sub>2</sub> supply rarely limits photosynthesis. C<sub>4</sub> and C<sub>4</sub>-like plants had a higher water use efficiency than C<sub>3</sub> plants at both CO<sub>2</sub> concentrations. There were positive correlations between photosynthetic induction and light-induced stomatal response, together with CO<sub>2</sub> compensation point, which was a parameter of the CO<sub>2</sub>-concentrating mechanism of C<sub>4</sub> photosynthesis. These results clearly show that C<sub>4</sub> photosynthesis in both monocots and dicots adapts to fluctuating light conditions more efficiently than C<sub>3</sub> photosynthesis. The rapid photosynthetic induction response in C<sub>4</sub> plants can be attributed to the rapid stomatal dynamics, the CO<sub>2</sub>-concentrating mechanism or both.</p>","PeriodicalId":20164,"journal":{"name":"Physiologia plantarum","volume":null,"pages":null},"PeriodicalIF":5.4,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141748793","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
From Photosynthesis to Industrial Applications. 从光合作用到工业应用
IF 5.4 2区 生物学
Physiologia plantarum Pub Date : 2024-07-01 DOI: 10.1111/ppl.14450
Christiane Funk, Wolfgang P Schröder
{"title":"From Photosynthesis to Industrial Applications.","authors":"Christiane Funk, Wolfgang P Schröder","doi":"10.1111/ppl.14450","DOIUrl":"https://doi.org/10.1111/ppl.14450","url":null,"abstract":"","PeriodicalId":20164,"journal":{"name":"Physiologia plantarum","volume":null,"pages":null},"PeriodicalIF":5.4,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141760315","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
ZmWRKY30 modulates drought tolerance in maize by influencing myo-inositol and reactive oxygen species homeostasis. ZmWRKY30通过影响肌醇和活性氧平衡调节玉米的耐旱性。
IF 5.4 2区 生物学
Physiologia plantarum Pub Date : 2024-07-01 DOI: 10.1111/ppl.14423
Lei Gu, Xuanxuan Chen, Yunyan Hou, Yongyan Cao, Hongcheng Wang, Bin Zhu, Xuye Du, Huinan Wang
{"title":"ZmWRKY30 modulates drought tolerance in maize by influencing myo-inositol and reactive oxygen species homeostasis.","authors":"Lei Gu, Xuanxuan Chen, Yunyan Hou, Yongyan Cao, Hongcheng Wang, Bin Zhu, Xuye Du, Huinan Wang","doi":"10.1111/ppl.14423","DOIUrl":"10.1111/ppl.14423","url":null,"abstract":"<p><p>Maize (Zea mays L.) is an important food crop with a wide range of uses in both industry and agriculture. Drought stress during its growth cycle can greatly reduce maize crop yield and quality. However, the molecular mechanisms underlying maize responses to drought stress remain unclear. In this work, a WRKY transcription factor-encoding gene, ZmWRKY30, from drought-treated maize leaves was screened out and characterized. ZmWRKY30 gene expression was induced by dehydration treatments. The ZmWRKY30 protein localized to the nucleus and displayed transactivation activity in yeast. Compared with wild-type (WT) plants, Arabidopsis lines overexpressing ZmWRKY30 exhibited a significantly enhanced drought stress tolerance, as evidenced by the improved survival rate, increased antioxidant enzyme activity by superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT), elevated proline content, and reduced lipid peroxidation recorded after drought stress treatment. In contrast, the mutator (Mu)-interrupted ZmWRKY30 homozygous mutant (zmwrky30) was more sensitive to drought stress than its null segregant (NS), characterized by the decreased survival rate, reduced antioxidant enzyme activity (SOD, POD, and CAT) and proline content, as well as increased malondialdehyde accumulation. RNA-Seq analysis further revealed that, under drought conditions, the knockout of the ZmWRKY30 gene in maize affected the expression of genes involved in reactive oxygen species (ROS), proline, and myo-inositol metabolism. Meanwhile, the zmwrky30 mutant exhibited significant downregulation of myo-inositol content in leaves under drought stress. Combined, our results suggest that ZmWRKY30 positively regulates maize responses to water scarcity. This work provides potential target genes for the breeding of drought-tolerant maize.</p>","PeriodicalId":20164,"journal":{"name":"Physiologia plantarum","volume":null,"pages":null},"PeriodicalIF":5.4,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141470164","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Gossypium arboreum PPD2 facilitates root architecture development to increase plant resilience to salt stress. 树麻 PPD2 可促进根系结构的发育,从而提高植物对盐胁迫的适应能力。
IF 5.4 2区 生物学
Physiologia plantarum Pub Date : 2024-07-01 DOI: 10.1111/ppl.14473
Xiao Xu, Tianyang Wen, Aiping Ren, Dongliang Li, Muhammad Dawood, Jiahe Wu, Ge Zhao
{"title":"Gossypium arboreum PPD2 facilitates root architecture development to increase plant resilience to salt stress.","authors":"Xiao Xu, Tianyang Wen, Aiping Ren, Dongliang Li, Muhammad Dawood, Jiahe Wu, Ge Zhao","doi":"10.1111/ppl.14473","DOIUrl":"https://doi.org/10.1111/ppl.14473","url":null,"abstract":"<p><p>The jasmonic acid (JA) signaling pathway plays an important role in plant responses to abiotic stresses. The PEAPOD (PPD) and jasmonate ZIM-domain (JAZ) protein in the JA signaling pathway belong to the same family, but their functions in regulating plant defense against salt stress remain to be elucidated. Here, Gossypium arboreum PPD2 was overexpressed in Arabidopsis thaliana and systematically silenced in cotton for exploring its function in regulating plant defense to salt stress. The GaPPD2-overexpressed Arabidopsis thaliana plants significantly increased the tolerance to salt stress compared to the wild type in both medium and soil, while the GaPPD2-silenced cotton plants showed higher sensitivity to salt stress than the control in pots. The antioxidant activities experiment showed that GaPPD2 may mitigate the accumulation of reactive oxygen species by promoting superoxide dismutase accumulation, consequently improving plant resilience to salt stress. Through the exogenous application of MeJA (methy jasmonate) and the protein degradation inhibitor MG132, it was found that GaPPD2 functions in plant defense against salt stress and is involved in the JA signaling pathway. The RNA-seq analysis of GaPPD2-overexpressed A. thaliana plants and receptor materials showed that the differentially expressed genes were mainly enriched in antioxidant activity, peroxidase activity, and plant hormone signaling pathways. qRT-PCR results demonstrated that GaPPD2 might positively regulate plant defense by inhibiting GH3.2/3.10/3.12 expression and activating JAZ7/8 expression. The findings highlight the potential of GaPPD2 as a JA signaling component gene for improving the cotton plant resistance to salt stress and provide insights into the mechanisms underlying plant responses to environmental stresses.</p>","PeriodicalId":20164,"journal":{"name":"Physiologia plantarum","volume":null,"pages":null},"PeriodicalIF":5.4,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141917328","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Autophagy is suppressed by low temperatures and is dispensable for cold acclimation in Arabidopsis. 拟南芥的自噬受到低温的抑制,在适应低温的过程中起着不可或缺的作用。
IF 5.4 2区 生物学
Physiologia plantarum Pub Date : 2024-07-01 DOI: 10.1111/ppl.14409
Akito Sato, Sena Inayoshi, Kohei Kitawaki, Ryota Mihara, Kosei Yoneda, Yasuko Ito-Inaba, Takehito Inaba
{"title":"Autophagy is suppressed by low temperatures and is dispensable for cold acclimation in Arabidopsis.","authors":"Akito Sato, Sena Inayoshi, Kohei Kitawaki, Ryota Mihara, Kosei Yoneda, Yasuko Ito-Inaba, Takehito Inaba","doi":"10.1111/ppl.14409","DOIUrl":"https://doi.org/10.1111/ppl.14409","url":null,"abstract":"<p><p>Plants have evolved various mechanisms to adapt to the ever-changing external environment. Autophagy is one such mechanism and has been suggested to play a key role in responding to and adapting to abiotic stresses in plants. However, the role of autophagy in adaptation to cold and freezing stresses remains to be characterized in detail. Here, we investigated the role of autophagy in the low-temperature response of Arabidopsis using atg mutants. Both the atg5-1 and atg10-1 mutants exhibited normal freezing tolerance, regardless of cold acclimation. A comparison of fresh weights indicated that the difference in growth between the wild-type and atg plants under cold conditions was rather small compared with that under normal conditions. Analysis of COLD-REGULATED gene expression showed no significant differences between the atg mutants and wild type. Treatment with 3-methyladenine, an inhibitor of autophagy, did not impair the induction of COR15Apro::LUC expression upon exposure to low temperature. Evaluation of autophagic activity using transgenic plants expressing RBCS-mRFP demonstrated that autophagy was rarely induced by cold exposure, even in the dark. Taken together, these data suggest that autophagy is suppressed by low temperatures and is dispensable for cold acclimation and freezing tolerance in Arabidopsis.</p>","PeriodicalId":20164,"journal":{"name":"Physiologia plantarum","volume":null,"pages":null},"PeriodicalIF":5.4,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141555343","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Melon CmRLCK VII-8 kinase genes CmRLCK27, CmRLCK30 and CmRLCK34 modulate resistance against bacterial and fungal diseases in Arabidopsis. 甜瓜 CmRLCK VII-8 激酶基因 CmRLCK27、CmRLCK30 和 CmRLCK34 可调节拟南芥对细菌和真菌病害的抗性。
IF 5.4 2区 生物学
Physiologia plantarum Pub Date : 2024-07-01 DOI: 10.1111/ppl.14456
Ya Wen, Fahao Wang, Hui Wang, Yan Bi, Yuqing Yan, Muhammad Noman, Dayong Li, Fengming Song
{"title":"Melon CmRLCK VII-8 kinase genes CmRLCK27, CmRLCK30 and CmRLCK34 modulate resistance against bacterial and fungal diseases in Arabidopsis.","authors":"Ya Wen, Fahao Wang, Hui Wang, Yan Bi, Yuqing Yan, Muhammad Noman, Dayong Li, Fengming Song","doi":"10.1111/ppl.14456","DOIUrl":"10.1111/ppl.14456","url":null,"abstract":"<p><p>Receptor-like cytoplasmic kinases (RLCKs) represent a distinct class of receptor-like kinases crucial for various aspects of plant biology, including growth, development, and stress responses. This study delves into the characterization of RLCK VII-8 members within cucurbits, particularly in melon, examining both structural features and the phylogenetic relationships of these genes/proteins. The investigation extends to their potential involvement in disease resistance by employing ectopic overexpression in Arabidopsis. The promoters of CmRLCK VII-8 genes harbor multiple phytohormone- and stress-responsive cis-acting elements, with the majority (excluding CmRLCK39) displaying upregulated expression in response to defense hormones and fungal infection. Subcellular localization studies reveal that CmRLCK VII-8 proteins predominantly reside on the plasma membrane, with CmRLCK29 and CmRLCK30 exhibiting additional nuclear distribution. Notably, Arabidopsis plants overexpressing CmRLCK30 manifest dwarfing and delayed flowering phenotypes. Overexpression of CmRLCK27, CmRLCK30, and CmRLCK34 in Arabidopsis imparts enhanced resistance against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000, concomitant with the strengthened expression of defense genes and reactive oxygen species accumulation. The CmRLCK VII-8 members actively participate in chitin- and flg22-triggered immune responses. Furthermore, CmRLCK30 interacts with CmMAPKKK1 and CmARFGAP, adding a layer of complexity to the regulatory network. In summary, this functional characterization underscores the regulatory roles of CmRLCK27, CmRLCK30, and CmRLCK34 in immune responses by influencing pathogen-induced defense gene expression and ROS accumulation.</p>","PeriodicalId":20164,"journal":{"name":"Physiologia plantarum","volume":null,"pages":null},"PeriodicalIF":5.4,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141788886","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Artemisia annua ZFP8L regulates glandular trichome development. 黄花蒿 ZFP8L 可调控腺毛体的发育。
IF 5.4 2区 生物学
Physiologia plantarum Pub Date : 2024-07-01 DOI: 10.1111/ppl.14461
Shiyang Zhang, Haixia Chen, Sheng Guo, Chen Wang, Kerui Jiang, Jiangyuan Cui, Bo Wang
{"title":"Artemisia annua ZFP8L regulates glandular trichome development.","authors":"Shiyang Zhang, Haixia Chen, Sheng Guo, Chen Wang, Kerui Jiang, Jiangyuan Cui, Bo Wang","doi":"10.1111/ppl.14461","DOIUrl":"https://doi.org/10.1111/ppl.14461","url":null,"abstract":"<p><p>Trichomes are known to be important biofactories that contribute to the production of secondary metabolites, such as terpenoids. C2H2-zinc finger proteins (C2H2-ZFPs) are vital transcription factors of plants' trichome development. However, little is known about the function of Artemisia annua C2H2-ZFPs in trichome development. To explore the roles of this gene family in trichome development, two C2H2-ZFP transcription factors, named AaZFP8L and AaGIS3, were identified; both are hormonally regulated in A. annua. Overexpression of AaZFP8L in tobacco led to a significant increase in the density and length of glandular trichomes, and improved terpenoid content. In contrast, AaGIS3 was found to positively regulate non-glandular trichome initiation and elongation, which reduces terpenoid accumulation. In addition, ABA contents significantly increased in AaZFP8L-overexpressing tobacco lines and AaZFP8L also can directly bind the promoter of the ABA biosynthesis genes. This study lays the foundation for further investigating A. annua C2H2-ZFPs in trichome development and terpenoid accumulation.</p>","PeriodicalId":20164,"journal":{"name":"Physiologia plantarum","volume":null,"pages":null},"PeriodicalIF":5.4,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141894009","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exogenous melatonin application helps late-sown durum wheat to cope with waterlogging under Mediterranean environmental conditions. 施用外源褪黑激素有助于晚播硬粒小麦应对地中海环境条件下的水涝。
IF 5.4 2区 生物学
Physiologia plantarum Pub Date : 2024-07-01 DOI: 10.1111/ppl.14477
Giuseppe Quaratiello, Samuele Risoli, Daniele Antichi, Elisa Pellegrini, Cristina Nali, Giacomo Lorenzini, Silvia Pampana, Claudia Pisuttu, Mariagrazia Tonelli, Lorenzo Cotrozzi
{"title":"Exogenous melatonin application helps late-sown durum wheat to cope with waterlogging under Mediterranean environmental conditions.","authors":"Giuseppe Quaratiello, Samuele Risoli, Daniele Antichi, Elisa Pellegrini, Cristina Nali, Giacomo Lorenzini, Silvia Pampana, Claudia Pisuttu, Mariagrazia Tonelli, Lorenzo Cotrozzi","doi":"10.1111/ppl.14477","DOIUrl":"https://doi.org/10.1111/ppl.14477","url":null,"abstract":"<p><p>In Mediterranean countries, late-sown durum wheat (Triticum turgidum L. subsp. durum) may face waterlogging (WL) at early stages. As mitigation of waterlogging by melatonin (MT) has been poorly explored, we analyzed the effects of exogenous MT foliar application to WL-stressed durum wheat on its ecophysiological performance, growth and biomass production. Late-sown plants of a relatively tolerant cultivar (i.e., Emilio-Lepido) were subjected to two WL durations (i.e., 14 and 35 days of WL; DOW) at tillering, with or without exogenous MT application (i.e., 0 and 100 μM). Prolonged WL reduced shoot biomass (-43%), but the application of MT mitigated this detrimental effect. Waterlogging impaired photosynthesis, reducing leaf CO<sub>2</sub> assimilation and chlorophyll content (-61 and - 57%, at 14 and 35 DOW). In control, MT increased the photosynthetic pigments (+48%), whereas it exacerbated the decrease in photosynthesis under both WL conditions (-72%, on average). Conversely, MT reduced WL-induced oxidative damage in both shoots and roots (-25% hydrogen peroxide production), facilitating osmotic adjustments and mitigating oxidative stress. The accumulation of osmotic regulators in MT + WL plants (+140 and + 42%, in shoots and roots at 35 DOW; respectively) and mineral solutes (+140 and + 104%, on average, in shoots and roots at 14 DOW) likely mitigated WL stress, limiting the impact of oxidative stress and promoting biomass accumulation. Our results highlight the potential of MT as a bioactive compound in mitigating the adverse effects of WL on late-sown durum wheat and the importance of the complex interactions between physiological responses and environmental stressors.</p>","PeriodicalId":20164,"journal":{"name":"Physiologia plantarum","volume":null,"pages":null},"PeriodicalIF":5.4,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141971626","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effect of Nutrient Solution Flow on Lettuce Root Morphology in Hydroponics: A Multi-Omics Analysis of Hormone Synthesis and Signal Transduction. 营养液流动对水培莴苣根形态的影响:激素合成和信号转导的多指标分析
IF 5.4 2区 生物学
Physiologia plantarum Pub Date : 2024-07-01 DOI: 10.1111/ppl.14435
Bateer Baiyin, Yue Xiang, Yang Shao, Jung Eek Son, Satoshi Yamada, Kotaro Tagawa, Qichang Yang
{"title":"Effect of Nutrient Solution Flow on Lettuce Root Morphology in Hydroponics: A Multi-Omics Analysis of Hormone Synthesis and Signal Transduction.","authors":"Bateer Baiyin, Yue Xiang, Yang Shao, Jung Eek Son, Satoshi Yamada, Kotaro Tagawa, Qichang Yang","doi":"10.1111/ppl.14435","DOIUrl":"10.1111/ppl.14435","url":null,"abstract":"<p><p>This study examined how the nutrient flow environment affects lettuce root morphology in hydroponics using multi-omics analysis. The results indicate that increasing the nutrient flow rate initially increased indicators such as fresh root weight, root length, surface area, volume, and average diameter before declining, which mirrors the trend observed for shoot fresh weight. Furthermore, a high-flow environment significantly increased root tissue density. Further analysis using Weighted Gene Co-expression Network Analysis (WGCNA) and Weighted Protein Co-expression Network Analysis (WPCNA) identified modules that were highly correlated with phenotypes and hormones. The analysis revealed a significant enrichment of hormone signal transduction pathways. Differences in the expression of genes and proteins related to hormone synthesis and transduction pathways were observed among the different flow conditions. These findings suggest that nutrient flow may regulate hormone levels and signal transmission by modulating the genes and proteins associated with hormone biosynthesis and signaling pathways, thereby influencing root morphology. These findings should support the development of effective methods for regulating the flow of nutrients in hydroponic contexts.</p>","PeriodicalId":20164,"journal":{"name":"Physiologia plantarum","volume":null,"pages":null},"PeriodicalIF":5.4,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141734928","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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