Molecular Plant最新文献_第2页

From steroidal glycoalkaloids to steroidal saponins: Biosynthesis and ecological role in the Solanum genus. 从类固醇糖生物碱到类固醇皂甙：茄属植物的生物合成和生态作用。

IF 17.1 1区生物学

Molecular Plant Pub Date : 2025-01-06 Epub Date: 2024-11-26 DOI: 10.1016/j.molp.2024.11.012

Yan Li, Jie Luo

引用次数: 0

A telomere-to-telomere genome assembly of the cultivated peanut.

IF 17.1 1区生物学

Molecular Plant Pub Date : 2025-01-06 Epub Date: 2024-12-02 DOI: 10.1016/j.molp.2024.12.001

Xiaobo Wang, Ziqi Sun, Feiyan Qi, Zhiyuan Zhou, Pei Du, Lei Shi, Wenzhao Dong, Bingyan Huang, Suoyi Han, Stefano Pavan, Meng Zhang, Mengjie Cui, Jing Xu, Hua Liu, Li Qin, Zhongxin Zhang, Xiaodong Dai, Wei Gao, Lijuan Miao, Ruifang Zhao, Juan Wang, Mengmeng Wang, Chenyang Zhi, Yaojun Hu, Huanhuan Zhao, Linjie Chen, Xiaodong Jin, Yanhui Sun, Zheng Zheng, Xinyou Zhang

引用次数: 0

The long noncoding RNA ALEX1 confers a functional phase state of ARF3 to enhance rice resistance to bacterial pathogens.

IF 17.1 1区生物学

Molecular Plant Pub Date : 2025-01-06 Epub Date: 2024-12-09 DOI: 10.1016/j.molp.2024.12.005

Meng-Qi Lei, Rui-Rui He, Yan-Fei Zhou, Lu Yang, Zhen-Fei Zhang, Chao Yuan, Wen-Long Zhao, Yu Cheng, Jian-Ping Lian, Yu-Chan Zhang, Wen-Tao Wang, Yang Yu, Yue-Qin Chen

{"title":"The long noncoding RNA ALEX1 confers a functional phase state of ARF3 to enhance rice resistance to bacterial pathogens.","authors":"Meng-Qi Lei, Rui-Rui He, Yan-Fei Zhou, Lu Yang, Zhen-Fei Zhang, Chao Yuan, Wen-Long Zhao, Yu Cheng, Jian-Ping Lian, Yu-Chan Zhang, Wen-Tao Wang, Yang Yu, Yue-Qin Chen","doi":"10.1016/j.molp.2024.12.005","DOIUrl":"10.1016/j.molp.2024.12.005","url":null,"abstract":"Rice bacterial blight is a devastating disease worldwide, causing significant yield losses. Understanding how plants defend against microbial infection is critical for sustainable crop production. In this study, we show that ALEX1, a previously identified pathogen-induced long noncoding RNA, localizes to the nucleus and directly binds AUXIN RESPONSE FACTOR 3 (ARF3). We showed that ARF3 forms the condensates in the nucleus via its intrinsically disordered middle region (MR), and that these ARF3 condensates display solid-like properties. We further revealed that ALEX1 directly binds the MR of ARF3 to regulate ARF3 condensate dynamics and promote ARF3 homodimerization. The dispersed, dimeric form of ARF3, referred to as its functional phase state, enhances its ability to transcriptionally repress the expression of downstream target genes such as JAZ13, thereby modulating the jasmonic acid signaling pathway and enhancing pathogen resistance in rice. Collectively, this study reveals the role of a long noncoding RNA in regulating protein condensation and complex assembly, thus contributing to plant pathogen resistance.","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"114-129"},"PeriodicalIF":17.1,"publicationDate":"2025-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142807741","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

N⁶-methyladenosine on the natural antisense transcript of NIA1 stabilizes its mRNA to boost NO biosynthesis and modulate stomatal movement.

IF 17.1 1区生物学

Molecular Plant Pub Date : 2025-01-06 Epub Date: 2024-12-17 DOI: 10.1016/j.molp.2024.12.011

Jie Li, Wen Tian, Ting Chen, Qing-Yan Liu, Hua-Wei Wu, Chuan-Hui Liu, Yuan-Yuan Fang, Hui-Shan Guo, Jian-Hua Zhao

{"title":"N6-methyladenosine on the natural antisense transcript of NIA1 stabilizes its mRNA to boost NO biosynthesis and modulate stomatal movement.","authors":"Jie Li, Wen Tian, Ting Chen, Qing-Yan Liu, Hua-Wei Wu, Chuan-Hui Liu, Yuan-Yuan Fang, Hui-Shan Guo, Jian-Hua Zhao","doi":"10.1016/j.molp.2024.12.011","DOIUrl":"10.1016/j.molp.2024.12.011","url":null,"abstract":"Nitric oxide (NO) is a crucial signaling molecule that regulates a wide range of metabolic pathways in different strata of organisms. In plants, nitrate reductase (NR) is a key enzyme for NO biosynthesis. There are two NR-encoding genes in Arabidopsis genome, NIA1 and NIA2, which are precisely regulated and expressed in a tissue-specific manner. In this study, we found that the natural antisense transcript as-NIA1, transcribed from the 3' UTR of NIA1, stabilizes NIA1 mRNA to maintain its circadian oscillation in plants grown under the light/dark cycle. Importantly, as-NIA1-dependent NIA1 mRNA stability is indispensable for NIA1-mediated NO biosynthesis in guard cells and natural stomatal closure. Moreover, we revealed that polypyrimidine tract-binding 3 (PTB3) regulates the stabilization of NIA1 mRNA by directly binding to UC-rich elements of as-NIA1. We further found that MTA deposits N6-methyladenosine (m6A) on as-NIA1, facilitating the as-NIA1-PTB3 interaction in vivo, in agreement with RNA structure prediction in that m6A-mediated structural alterations expose the UC-rich elements to enhance the accessibility of PTB3. Taken together, these findings reveal a novel molecular mechanism by which plants precisely manipulate NO biosynthesis to modulate light/dark-regulated stomatal movement, highlighting the coupling of RNA epigenetic modifications and structures shaping RNA-protein interactions in the regulation of hormone biosynthesis.","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"151-165"},"PeriodicalIF":17.1,"publicationDate":"2025-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142854978","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Molecular and cellular mechanisms of photoperiod- and thermo-sensitive genic male sterility in plants.

IF 17.1 1区生物学

Molecular Plant Pub Date : 2025-01-06 Epub Date: 2024-12-19 DOI: 10.1016/j.molp.2024.12.012

Na Wang, Xiang Li, Jun Zhu, Zhong-Nan Yang

{"title":"Molecular and cellular mechanisms of photoperiod- and thermo-sensitive genic male sterility in plants.","authors":"Na Wang, Xiang Li, Jun Zhu, Zhong-Nan Yang","doi":"10.1016/j.molp.2024.12.012","DOIUrl":"10.1016/j.molp.2024.12.012","url":null,"abstract":"Photoperiod- and thermo-sensitive genic male sterile (P/TGMS) lines display male sterility under high-temperature/long-day light conditions and male fertility under low-temperature/short-day light conditions. P/TGMS lines are the fundamental basis for the two-line hybrid breeding, which has notably increased the yield potential and grain quality of rice cultivars. In this review, we focus on the research progress on photoperiod- and thermo-sensitive genic male sterility in plants. The essence of P/TGMS line is their ability to produce viable pollen under varying conditions. We overview the processes involved in anther and pollen development, as well as the molecular, cellular, and genetic mechanisms underlying P/TGMS in Arabidopsis, rice, and other crops. Slow development has been identified as a common mechanism of P/TGMS fertility restoration in both Arabidopsis and rice, while reactive oxygen species homeostasis has been implicated in rice P/TGMS. Furthermore, we discuss the prospective applications of P/TGMS and potential solutions to the challenges in this field. This review deepens the understanding of the mechanisms underlying P/TGMS and its utilization in two-line hybrid breeding across diverse crops.","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"26-41"},"PeriodicalIF":17.1,"publicationDate":"2025-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142864901","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Branching out: Nitrogen-dependent modulation of strigolactone signaling. 分支：氮依赖性地调节绞股蓝内酯信号。

IF 17.1 1区生物学

Molecular Plant Pub Date : 2025-01-06 Epub Date: 2024-11-15 DOI: 10.1016/j.molp.2024.11.006

Andrew J Tuckey, Mark T Waters

引用次数: 0

Biomolecular condensates modulate membrane remodeling. 生物分子凝聚物调节膜重塑。

IF 17.1 1区生物学

Molecular Plant Pub Date : 2025-01-06 Epub Date: 2024-11-21 DOI: 10.1016/j.molp.2024.11.009

Emma K Meese, Lucia C Strader

引用次数: 0

Histone H4K8hib modification promotes gene expression and regulates rice immunity.

IF 17.1 1区生物学

Molecular Plant Pub Date : 2025-01-06 Epub Date: 2024-12-06 DOI: 10.1016/j.molp.2024.12.003

Qiutao Xu, Xuan Ma, Xuelu Wei, Zhengting Chen, Yuhang Duan, Yuliang Ju, Zhaoyun Wang, Jing Chen, Lu Zheng, Xiaolin Chen, Junbin Huang, Jisen Zhang, Xiaoyang Chen

引用次数: 0

The miR172a-SNB module orchestrates both induced and adult-plant resistance to multiple diseases via MYB30-mediated lignin accumulation in rice.

IF 17.1 1区生物学

Molecular Plant Pub Date : 2025-01-06 Epub Date: 2024-11-30 DOI: 10.1016/j.molp.2024.11.015

He Wang, Zhe-Xu Wang, Hong-Yuan Tian, Yu-Long Zeng, Hao Xue, Wan-Ting Mao, Lu-Yue Zhang, Jun-Ni Chen, Xiang Lu, Yong Zhu, Guo-Bang Li, Zhi-Xue Zhao, Ji-Wei Zhang, Yan-Yan Huang, Jing Fan, Pei-Zhou Xu, Xiao-Qiong Chen, Wei-Tao Li, Xian-Jun Wu, Wen-Ming Wang, Yan Li

{"title":"The miR172a-SNB module orchestrates both induced and adult-plant resistance to multiple diseases via MYB30-mediated lignin accumulation in rice.","authors":"He Wang, Zhe-Xu Wang, Hong-Yuan Tian, Yu-Long Zeng, Hao Xue, Wan-Ting Mao, Lu-Yue Zhang, Jun-Ni Chen, Xiang Lu, Yong Zhu, Guo-Bang Li, Zhi-Xue Zhao, Ji-Wei Zhang, Yan-Yan Huang, Jing Fan, Pei-Zhou Xu, Xiao-Qiong Chen, Wei-Tao Li, Xian-Jun Wu, Wen-Ming Wang, Yan Li","doi":"10.1016/j.molp.2024.11.015","DOIUrl":"10.1016/j.molp.2024.11.015","url":null,"abstract":"Plants mount induced resistance and adult-plant resistance against different pathogens throughout the whole growth period. Rice production faces threats from multiple major diseases, including rice blast, sheath blight, and bacterial leaf blight. Here, we report that the miR172a-SNB-MYB30 module regulates both induced and adult-plant resistance to these three major diseases via lignification in rice. Mechanistically, pathogen infections induce the expression of miR172a, which downregulates the transcription factor SNB to release its suppression of MYB30, leading to an increase in lignin biosynthesis and disease resistance throughout the whole growth period. Moreover, expression levels of miR172a and MYB30 gradually increase and are consistently correlated with lignin contents and disease resistance during rice development, reaching a peak at full maturity, whereas SNB RNA levels are negatively correlated with lignin contents and disease resistance, indicating the involvement of the miR172a-SNB-MYB30 module in adult-plant resistance. The functional domain of SNB protein and its binding sites in the MYB30 promoter are highly conserved among more than 4000 rice accessions, while abnormal expression of miR172a, SNB, or MYB30 compromises yield traits, suggesting artificial selection of the miR172a-SNB-MYB30 module during rice domestication. Taken together, these results reveal a novel role for a conserved miRNA-regulated module that contributes significantly to induced and adult-plant resistance against multiple pathogens by increasing lignin accumulation, deepening our understanding of broad-spectrum resistance and adult-plant resistance.","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"59-75"},"PeriodicalIF":17.1,"publicationDate":"2025-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142770587","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

ALFIN-like proteins link histone H3K4me3 to H2A ubiquitination and coordinate diverse chromatin modifications in Arabidopsis. ALFIN 样蛋白将组蛋白 H3K4me3 与 H2A 泛素化联系起来，并协调拟南芥中的多种染色质修饰。

IF 17.1 1区生物学

Molecular Plant Pub Date : 2025-01-06 Epub Date: 2024-12-11 DOI: 10.1016/j.molp.2024.12.007

Xiao-Min Su, Dan-Yang Yuan, Na Liu, Zhao-Chen Zhang, Minqi Yang, Lin Li, She Chen, Yue Zhou, Xin-Jian He

{"title":"ALFIN-like proteins link histone H3K4me3 to H2A ubiquitination and coordinate diverse chromatin modifications in Arabidopsis.","authors":"Xiao-Min Su, Dan-Yang Yuan, Na Liu, Zhao-Chen Zhang, Minqi Yang, Lin Li, She Chen, Yue Zhou, Xin-Jian He","doi":"10.1016/j.molp.2024.12.007","DOIUrl":"10.1016/j.molp.2024.12.007","url":null,"abstract":"Trimethylation of histone H3K4 (H3K4me3) is widely distributed at numerous actively transcribed protein-coding genes throughout the genome. However, the interplay between H3K4me3 and other chromatin modifications in plants remains poorly understood. In this study, we show that the Arabidopsis thaliana ALFIN-LIKE (AL) proteins contain a C-terminal PHD finger capable of binding to H3K4me3 and a PHD-associated AL (PAL) domain that interacts with components of the Polycomb repressive complex 1, thereby facilitating H2A ubiquitination (H2Aub) at H3K4me3-enriched genes throughout the genome. Furthermore, we demonstrate that loss of function of SDG2, encoding a key histone H3K4 methyltransferase, leads to a reduction in H3K4me3 level, which subsequently causes a genome-wide decrease in H2Aub, revealing a strong association between H3K4me3 and H2Aub. Finally, we discover that the PAL domain of AL proteins interacts with various other chromatin-related proteins or complexes, including those involved in regulating H2A.Z deposition, H3K27me3 demethylation, histone deacetylation, and chromatin accessibility. Our genome-wide analysis suggests that the AL proteins play a crucial role in coordinating H3K4me3 with multiple other chromatin modifications across the genome.","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"130-150"},"PeriodicalIF":17.1,"publicationDate":"2025-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142818756","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0