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Whole-genome sequencing of a multidrug resistant Escherichia coli RSJ-SAU.Ec.2025 isolated from nasal swab of cat in Bangladesh. 多药耐药大肠杆菌rsj - sa . ec的全基因组测序。2025从孟加拉国猫鼻拭子中分离出来。
IF 0.6
Microbiology Resource Announcements Pub Date : 2026-10-08 Epub Date: 2026-09-03 DOI: 10.1128/mra.00774-26
Muhammad Abdul Mannan, Rubaya Sharmin Jhilik, S M Abdullah, Md Abdullah Al Farhan, Mustafizur Rahman, Mohammad Jubair, Md Morshedur Rahman, Md Abu Ahsan Gilman, M Nazmul Hoque, Md Rezaul Karim
{"title":"Whole-genome sequencing of a multidrug resistant <i>Escherichia coli</i> RSJ-SAU.Ec.2025 isolated from nasal swab of cat in Bangladesh.","authors":"Muhammad Abdul Mannan, Rubaya Sharmin Jhilik, S M Abdullah, Md Abdullah Al Farhan, Mustafizur Rahman, Mohammad Jubair, Md Morshedur Rahman, Md Abu Ahsan Gilman, M Nazmul Hoque, Md Rezaul Karim","doi":"10.1128/mra.00774-26","DOIUrl":"10.1128/mra.00774-26","url":null,"abstract":"<p><p>We report the whole-genome sequence of multidrug resistant <i>Escherichia coli</i> RSJ-SAU.Ec.2025 isolated from the nasal swab of a cat in Dhaka, Bangladesh. The assembled genome comprises 5,318,660 bp with 50.5% guanine-cystosine (GC) content, together with putative antibiotic-resistant genes.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0077426"},"PeriodicalIF":0.6,"publicationDate":"2026-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13689040/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148888026","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Transcriptomic profiling of murine macrophages during Francisella tularensis infection. 土拉菌感染小鼠巨噬细胞的转录组学分析。
IF 0.6
Microbiology Resource Announcements Pub Date : 2026-10-08 Epub Date: 2026-09-21 DOI: 10.1128/mra.00856-26
Ma'ayan Israeli, Inbar Cohen-Gihon, Ofir Israeli, Ofer Cohen, Adi Bercovich-Kinori
{"title":"Transcriptomic profiling of murine macrophages during <i>Francisella tularensis</i> infection.","authors":"Ma'ayan Israeli, Inbar Cohen-Gihon, Ofir Israeli, Ofer Cohen, Adi Bercovich-Kinori","doi":"10.1128/mra.00856-26","DOIUrl":"10.1128/mra.00856-26","url":null,"abstract":"<p><p><i>Francisella tularensis</i>, a virulent bioterrorism threat, subverts host immune responses within macrophages, its primary replication niche. To elucidate the temporal dynamics of the host response, we announce comprehensive time-course RNA-seq data sets capturing the global transcriptional profile of murine RAW 264.7 macrophages across early and late stages of <i>F. tularensis</i> infection.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0085626"},"PeriodicalIF":0.6,"publicationDate":"2026-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13688870/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149012662","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequences of two bovine-associated Lachnospiraceae: Pseudobutyrivibrio xylanivorans DSM 14809T and [Clostridium] fimetarium DSM 9179T. 绘制两种与牛相关的毛缕菌科：xylanivorans Pseudobutyrivibrio xylanivorans DSM 14809T和[Clostridium] fimetarium DSM 9179T的基因组序列。
IF 0.6
Microbiology Resource Announcements Pub Date : 2026-10-08 Epub Date: 2026-08-31 DOI: 10.1128/mra.00875-26
Samantha Marroquin, Tanmay Rohatgi, Stefan Spring, Markus Göker, Chris Daum, Marcel Huntemann, Rekha Seshadri, Matthew A Escobar
{"title":"Draft genome sequences of two bovine-associated <i>Lachnospiraceae</i>: <i>Pseudobutyrivibrio xylanivorans</i> DSM 14809<sup>T</sup> and [<i>Clostridium</i>] <i>fimetarium</i> DSM 9179<sup>T</sup>.","authors":"Samantha Marroquin, Tanmay Rohatgi, Stefan Spring, Markus Göker, Chris Daum, Marcel Huntemann, Rekha Seshadri, Matthew A Escobar","doi":"10.1128/mra.00875-26","DOIUrl":"10.1128/mra.00875-26","url":null,"abstract":"<p><p>Here, we report draft genome sequences of two bacterial type strains isolated from cows, <i>Pseudobutyrivibrio xylanivorans</i> DSM 14809<sup>T</sup> and [<i>Clostridium</i>] <i>fimetarium</i> DSM 9179<sup>T</sup>. The <i>P. xylanivorans</i> DSM 14809<sup>T</sup> genome is 3.4 Mbp with 3,147 predicted genes, while the <i>C. fimetarium</i> DSM 9179<sup>T</sup> genome is 4.6 Mbp with 4,215 predicted genes.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0087526"},"PeriodicalIF":0.6,"publicationDate":"2026-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13689216/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148865722","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequences of two Enterococcus faecium strains recovered from blood cultures. 绘制从血培养中恢复的两株屎肠球菌的基因组序列。
IF 0.6
Microbiology Resource Announcements Pub Date : 2026-10-08 Epub Date: 2026-09-08 DOI: 10.1128/mra.00683-26
Wenjing Wen, Ning Sun, Yongchao Ma
{"title":"Draft genome sequences of two <i>Enterococcus faecium</i> strains recovered from blood cultures.","authors":"Wenjing Wen, Ning Sun, Yongchao Ma","doi":"10.1128/mra.00683-26","DOIUrl":"10.1128/mra.00683-26","url":null,"abstract":"<p><p>We report the draft genomes of two <i>Enterococcus faecium</i> blood isolates: one vancomycin-susceptible and one vancomycin-resistant. The assemblies comprised 2,991,512 bp (7 contigs) for the susceptible strain and 3,305,414 bp (7 contigs) for the resistant strain.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0068326"},"PeriodicalIF":0.6,"publicationDate":"2026-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13689424/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148906748","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequence of Bacillus atrophaeus X3, a pigmented subantarctic soil isolate from Magallanes Region, Chile. 萎缩芽孢杆菌X3的基因组序列草图，这是一种来自智利麦哲伦地区的亚南极色素土壤分离物。
IF 0.6
Microbiology Resource Announcements Pub Date : 2026-10-08 Epub Date: 2026-09-11 DOI: 10.1128/mra.00826-26
Alex Gonzalez, Nancy Calisto-Ulloa, Francisco Isotta, Bárbara Seguel-Vinés, Pedro Simeone, Brenda Modak, Mick Parra, Natalia Valdés
{"title":"Draft genome sequence of <i>Bacillus atrophaeus</i> X3, a pigmented subantarctic soil isolate from Magallanes Region, Chile.","authors":"Alex Gonzalez, Nancy Calisto-Ulloa, Francisco Isotta, Bárbara Seguel-Vinés, Pedro Simeone, Brenda Modak, Mick Parra, Natalia Valdés","doi":"10.1128/mra.00826-26","DOIUrl":"10.1128/mra.00826-26","url":null,"abstract":"<p><p><i>Bacillus atrophaeus</i> strain X3, isolated from subantarctic soils near Laguna Amarga, Magallanes Region, Chile, harbors a high-quality genome (three contigs, 4.08 Mb, 43.4% GC content). Its genomic sequence provides insights into cold adaptation mechanisms in the <i>Bacillus subtilis</i> group, with potential relevance for emerging biotechnological applications.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0082626"},"PeriodicalIF":0.6,"publicationDate":"2026-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13688960/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148945111","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterization of prokaryotic communities in Guánica State dry forest caves using 16S ribosomal RNA gene amplicon sequencing. 利用16S核糖体RNA基因扩增子测序对Guánica国家干森林洞穴原核生物群落进行表征。
IF 0.6
Microbiology Resource Announcements Pub Date : 2026-10-08 Epub Date: 2026-09-14 DOI: 10.1128/mra.00646-26
Camila M Martínez-Llaurador, Isabel Aguirre-Ortiz, Francisco J Román-Soto, Peter A Camacho-Nazario, Naomy M Chaparro-Mata, Tesia Lin, Josué Rodríguez-Ramos, Ángel M Nieves-Rivera, Miguel J Martínez-González, Miguel Canals-Mora, Carlos Rios-Velazquez
{"title":"Characterization of prokaryotic communities in Guánica State dry forest caves using 16S ribosomal RNA gene amplicon sequencing.","authors":"Camila M Martínez-Llaurador, Isabel Aguirre-Ortiz, Francisco J Román-Soto, Peter A Camacho-Nazario, Naomy M Chaparro-Mata, Tesia Lin, Josué Rodríguez-Ramos, Ángel M Nieves-Rivera, Miguel J Martínez-González, Miguel Canals-Mora, Carlos Rios-Velazquez","doi":"10.1128/mra.00646-26","DOIUrl":"10.1128/mra.00646-26","url":null,"abstract":"<p><p>Prokaryotic diversity across four caves and a guano-enriched pond (mud) in Guánica State Dry Forest was characterized using 16S ribosomal RNA gene amplicon sequencing. Microbial profiling varies across the limestone rock formations and dry cave environment, revealing distinct subterranean prokaryotic composition.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0064626"},"PeriodicalIF":0.6,"publicationDate":"2026-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13688992/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148963732","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete coding sequence of Taiwan bat lyssavirus 2 from Chinese noctule (Nyctalus plancyi velutinus) at New Taipei City, Taiwan. 台湾新北市中华夜蛾（Nyctalus plancyi velutinus）台湾蝙蝠溶血病毒2的完整编码序列。
IF 0.6
Microbiology Resource Announcements Pub Date : 2026-10-08 Epub Date: 2026-09-16 DOI: 10.1128/mra.00723-26
Shu-Chia Hu, Chao-Lung Hsu, Chao-Chin Chang, Fan Lee
{"title":"Complete coding sequence of Taiwan bat lyssavirus 2 from Chinese noctule (<i>Nyctalus plancyi velutinus</i>) at New Taipei City, Taiwan.","authors":"Shu-Chia Hu, Chao-Lung Hsu, Chao-Chin Chang, Fan Lee","doi":"10.1128/mra.00723-26","DOIUrl":"10.1128/mra.00723-26","url":null,"abstract":"<p><p>The complete coding sequence of Taiwan bat lyssavirus 2 was obtained from Chinese noctule (<i>Nyctalus plancyi velutinus</i>) at Zhonghe District, New Taipei City, Taiwan, in 2024. Sequence comparison and phylogenetic analysis revealed that the genome was closely related to those lyssaviruses within Phylogroup I.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0072326"},"PeriodicalIF":0.6,"publicationDate":"2026-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13689470/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148977151","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of Thermincola carboxydiphila DSM 17129T isolated from a hot spring of the Lake Baikal area. 贝加尔湖地区某温泉热cola carboxydiphila DSM 17129T的全基因组序列。
IF 0.6
Microbiology Resource Announcements Pub Date : 2026-10-08 Epub Date: 2026-09-17 DOI: 10.1128/mra.00822-26
Florian P Rosenbaum, Tim Böer, Volker Müller, Rolf Daniel, Anja Poehlein
{"title":"Complete genome sequence of <i>Thermincola carboxydiphila</i> DSM 17129<sup>T</sup> isolated from a hot spring of the Lake Baikal area.","authors":"Florian P Rosenbaum, Tim Böer, Volker Müller, Rolf Daniel, Anja Poehlein","doi":"10.1128/mra.00822-26","DOIUrl":"10.1128/mra.00822-26","url":null,"abstract":"<p><p>We report on the complete genome sequence of the carboxydotrophic hydrogenogenic, thermophilic, and alkalitolerant acetogen <i>Thermincola carboxydiphila</i> (DSM 17129<sup>T</sup>). The genome harbors a circular chromosome with a size of 3.519 Mbp and a GC content of 45.6%. The genome contains 3,490 genes in total.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0082226"},"PeriodicalIF":0.6,"publicationDate":"2026-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13688840/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148990563","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequence of a multidrug-resistant Klebsiella pneumoniae MTRKPMMI01 strain isolated from a diarrheic dairy cow in Bangladesh. 绘制从孟加拉国腹泻奶牛中分离的多药耐药肺炎克雷伯菌MTRKPMMI01菌株的基因组序列。
IF 0.6
Microbiology Resource Announcements Pub Date : 2026-10-08 Epub Date: 2026-09-21 DOI: 10.1128/mra.00773-26
Md Monirul Islam, Anindita Ash Prome, Sadia Afrin Punom, Md Makshuder Rahman Zim, Md Raisul Islam, S M Abu Sama Al Faruquee, Ram Narayan Yadav, Afsan Sarwer, Atikur Rahaman, Saifur Rahman, Md Bahanur Rahman, Md Tanvir Rahman
{"title":"Draft genome sequence of a multidrug-resistant <i>Klebsiella pneumoniae</i> MTRKPMMI01 strain isolated from a diarrheic dairy cow in Bangladesh.","authors":"Md Monirul Islam, Anindita Ash Prome, Sadia Afrin Punom, Md Makshuder Rahman Zim, Md Raisul Islam, S M Abu Sama Al Faruquee, Ram Narayan Yadav, Afsan Sarwer, Atikur Rahaman, Saifur Rahman, Md Bahanur Rahman, Md Tanvir Rahman","doi":"10.1128/mra.00773-26","DOIUrl":"10.1128/mra.00773-26","url":null,"abstract":"<p><p>We report the draft genome sequence of <i>Klebsiella pneumoniae</i> strain MTRKPMMI01, isolated from a rectal swab of a diarrheic dairy cow from a dairy farm in Mymensingh city, with a total length of 5,239,585 bp, 3 plasmid replicons, 41 predicted antimicrobial resistance genes, and 93 predicted virulence factor genes.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0077326"},"PeriodicalIF":0.6,"publicationDate":"2026-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13689165/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149012683","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
High-throughput data announcement for Escherichia coli strain KAB04 isolated from ready-to-eat vegetable salads in Central Uganda. 从乌干达中部即食蔬菜沙拉中分离出的大肠杆菌KAB04高通量数据公告。
IF 0.6
Microbiology Resource Announcements Pub Date : 2026-10-08 Epub Date: 2026-08-27 DOI: 10.1128/mra.00664-26
Abubaker Kawooya, Chinyere Nkemjika Anyanwu, Emmanuel Eilu, Hussein Kafeero, Adam Ahmed Adam, Jackim Nabona, Mariam Oyedeji Amusa, Danladi Makeri, Martin Odoki, Rasheed Omotayo Adeyemo, Michael Ben Okon, Ismail Abiola Adebayo, Saheed Adekunle Akinola
{"title":"High-throughput data announcement for <i>Escherichia coli</i> strain KAB04 isolated from ready-to-eat vegetable salads in Central Uganda.","authors":"Abubaker Kawooya, Chinyere Nkemjika Anyanwu, Emmanuel Eilu, Hussein Kafeero, Adam Ahmed Adam, Jackim Nabona, Mariam Oyedeji Amusa, Danladi Makeri, Martin Odoki, Rasheed Omotayo Adeyemo, Michael Ben Okon, Ismail Abiola Adebayo, Saheed Adekunle Akinola","doi":"10.1128/mra.00664-26","DOIUrl":"10.1128/mra.00664-26","url":null,"abstract":"<p><p>We report the draft-genome sequence of <i>Escherichia coli</i> strain KAB04 isolated from a ready-to-eat vegetable salad in central Uganda. The assembled genome is 5,231,463 base pairs in length, with a guanine-cytosine content of 50.5%. Genome completeness is 99.19%, with a 0.63% contamination.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0066426"},"PeriodicalIF":0.6,"publicationDate":"2026-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13689120/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148830297","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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