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Complete genome sequence of Bacillus pumilus LBUM494, a plant-beneficial strain isolated from the rhizosphere of a strawberry plant. 从草莓根瘤中分离出的植物益生菌株 Bacillus pumilus LBUM494 的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-10 Epub Date: 2024-09-09 DOI: 10.1128/mra.00825-24
Adrien Biessy, Martin Filion
{"title":"Complete genome sequence of <i>Bacillus pumilus</i> LBUM494, a plant-beneficial strain isolated from the rhizosphere of a strawberry plant.","authors":"Adrien Biessy, Martin Filion","doi":"10.1128/mra.00825-24","DOIUrl":"10.1128/mra.00825-24","url":null,"abstract":"<p><p>Here, we present the complete genome sequence of <i>Bacillus pumilus</i> LBUM494, a plant-beneficial bacterial strain isolated from the rhizosphere of a strawberry plant grown in an agricultural field located in Bouctouche, New Brunswick, Canada. The genome size is 3,699,913 bp with a GC content of 41.7%.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465737/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142154553","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of Synechocystis sp. LKSZ1 isolated from a pond in the Suzukakedai campus of Tokyo Institute of Technology. 从东京工业大学铃木台校区池塘中分离出的 Synechocystis sp.
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-10 Epub Date: 2024-09-09 DOI: 10.1128/mra.00549-24
Leonardo Ken Okumura, Shinji Masuda
{"title":"Complete genome sequence of <i>Synechocystis</i> sp. LKSZ1 isolated from a pond in the Suzukakedai campus of Tokyo Institute of Technology.","authors":"Leonardo Ken Okumura, Shinji Masuda","doi":"10.1128/mra.00549-24","DOIUrl":"10.1128/mra.00549-24","url":null,"abstract":"<p><p>Cyanobacteria belonging to the <i>Synechocystis</i> genus have been isolated from diverse aquatic environments. This announcement reports the complete genome sequence of <i>Synechocystis</i> sp. LKSZ1 newly isolated from a pond in a university campus in Yokohama, Japan. The genome sequencing was performed using the PacBio Revio HiFi long-read technology.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465753/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142154518","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome sequence of Colletotrichum karsti isolated from rose leaves exhibiting anthracnose symptoms in Potchefstroom, South Africa. 从南非波切夫斯特鲁姆出现炭疽病症状的玫瑰叶片中分离出的卡氏柱孢菌基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-10 Epub Date: 2024-09-09 DOI: 10.1128/mra.00275-24
Tawanda E Maguvu, Adekunle Raimi, Florent P Trouillas, Rasheed Adeleke, Cornelius C Bezuidenhout
{"title":"Genome sequence of <i>Colletotrichum karsti</i> isolated from rose leaves exhibiting anthracnose symptoms in Potchefstroom, South Africa.","authors":"Tawanda E Maguvu, Adekunle Raimi, Florent P Trouillas, Rasheed Adeleke, Cornelius C Bezuidenhout","doi":"10.1128/mra.00275-24","DOIUrl":"10.1128/mra.00275-24","url":null,"abstract":"<p><p>We present the genome sequence of <i>Colletotrichum karsti</i> isolated from rose leaves exhibiting anthracnose symptoms. The genome was assembled to 53.2 Mbp organized into 753 scaffolds having an N50 of 582,313 kbp and a GC content of 52.5%. The genome had an estimated 99.4% of the core Ascomycota genes.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465792/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142154527","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome sequences of 70 multidrug-resistant Gram-negative isolates in high-risk neonates in the Northeast of Mexico. 墨西哥东北部高危新生儿中 70 个耐多药革兰氏阴性菌分离株的基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-10 Epub Date: 2024-09-03 DOI: 10.1128/mra.00274-24
Lorena Rodriguez-Orduña, Victor Javier Lara-Diaz, Mario René Alcorta-Garcia, Claudia Nohemi Lopez-Villaseñor, Cuauhtemoc Licona-Cassani
{"title":"Genome sequences of 70 multidrug-resistant Gram-negative isolates in high-risk neonates in the Northeast of Mexico.","authors":"Lorena Rodriguez-Orduña, Victor Javier Lara-Diaz, Mario René Alcorta-Garcia, Claudia Nohemi Lopez-Villaseñor, Cuauhtemoc Licona-Cassani","doi":"10.1128/mra.00274-24","DOIUrl":"10.1128/mra.00274-24","url":null,"abstract":"<p><p>Infections by multidrug-resistant pathogens are steadily increasing worldwide. A considerable proportion of neonatal intensive care admissions have a bacterial infection with multidrug-resistant bacteria during their hospital stay. In this work, we report draft genome sequences of 70 selected isolates from high-risk neonates in the Northeast of Mexico.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465807/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142120242","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequences of clinical Mycobacterium canettii strains in Canada. 加拿大临床分枝杆菌菌株的基因组序列草案。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-10 Epub Date: 2024-09-19 DOI: 10.1128/mra.00622-24
Md Rashedul Islam, Heather Adam, Pierre-Marie Akochy, Meenu Sharma, Alisa McGurran, Hafid Soualhine
{"title":"Draft genome sequences of clinical <i>Mycobacterium canettii</i> strains in Canada.","authors":"Md Rashedul Islam, Heather Adam, Pierre-Marie Akochy, Meenu Sharma, Alisa McGurran, Hafid Soualhine","doi":"10.1128/mra.00622-24","DOIUrl":"10.1128/mra.00622-24","url":null,"abstract":"<p><p><i>Mycobacterium canettii</i> is a rare pathogen causing tuberculosis in humans and presents a risk to public health. Here, we report the genome sequences of two <i>M. canettii</i> strains. The genomes will assist in creating sequence-based tools for <i>M. canettii</i> and serve as references for identification, surveillance, and epidemiological investigations.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465794/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142291275","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Thirteen draft genome assemblies of Bacillus spp. isolated from HLB-impacted citrus trees. 从受 HLB 影响的柑橘树中分离出的 13 个芽孢杆菌属基因组组装草案。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-10 Epub Date: 2024-09-10 DOI: 10.1128/mra.00602-24
Flávia Campos Vieira, Alex Blacutt, Christopher Drozd, Polrit Viravathana, Nichole Ginnan, M Caroline Roper
{"title":"Thirteen draft genome assemblies of <i>Bacillus</i> spp. isolated from HLB-impacted citrus trees.","authors":"Flávia Campos Vieira, Alex Blacutt, Christopher Drozd, Polrit Viravathana, Nichole Ginnan, M Caroline Roper","doi":"10.1128/mra.00602-24","DOIUrl":"10.1128/mra.00602-24","url":null,"abstract":"<p><p>We report the draft genome assembly, annotation, and phylogenetic placement of 13 <i>Bacillus</i> spp. isolates isolated from citrus groves under high (Florida) or low (California) Huanglongbing disease pressure.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465805/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142291282","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The complete mitochondrial genome of the banana pathogen Fusarium oxysporum f. sp. cubense M5. 香蕉病原体 Fusarium oxysporum f. sp. cubense M5 的完整线粒体基因组。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-10 Epub Date: 2024-09-09 DOI: 10.1128/mra.00421-24
Luis David Maldonado-Bonilla, Juan Caballero-Pérez, Rodolfo Enrique Ángeles-Argáiz
{"title":"The complete mitochondrial genome of the banana pathogen <i>Fusarium oxysporum</i> f. sp. <i>cubense</i> M5.","authors":"Luis David Maldonado-Bonilla, Juan Caballero-Pérez, Rodolfo Enrique Ángeles-Argáiz","doi":"10.1128/mra.00421-24","DOIUrl":"10.1128/mra.00421-24","url":null,"abstract":"<p><p>We report the complete mitochondrial genome of a causal agent of banana fusarium wilt isolated in Mexico. The whole set of genes encoding proteins related to respiration and ATP synthesis, rRNAs, tRNAs are enlisted. Two open reading frames of unknown function conserved in <i>Fusarium oxysporum</i> were also identified.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11468197/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142154529","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Nine Cluster E mycobacteriophages isolated from soil. 从土壤中分离出的九种 E 组噬霉菌病毒。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-10 Epub Date: 2024-08-30 DOI: 10.1128/mra.00463-24
Joseph M Gaballa, Amanda Freise, Krisanavane Reddi, Jordan Moberg Parker
{"title":"Nine Cluster E mycobacteriophages isolated from soil.","authors":"Joseph M Gaballa, Amanda Freise, Krisanavane Reddi, Jordan Moberg Parker","doi":"10.1128/mra.00463-24","DOIUrl":"10.1128/mra.00463-24","url":null,"abstract":"<p><p>Mycobacteriophages FireRed, MISSy, MPhalcon, Murica, Sassay, Terminus, Willez, YassJohnny, and Youngblood were isolated from soil using <i>Mycobacterium smegmatis</i> as a host. Genome sequencing and annotation revealed that they belong to Actinobacteriophage Cluster E. Here, we describe the features of their genomes and discuss similarities within these Cluster E phages.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465865/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142109406","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequences of 12 lytic phages against multidrug-resistant Enterococcus faecalis. 针对耐多药粪肠球菌的 12 种噬菌体的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-10 Epub Date: 2024-09-10 DOI: 10.1128/mra.00687-24
Oumarou Soro, Collins Kigen, Andrew Nyerere, Moses Gachoya, James Wachira, Vanessa Onyonyi, Martin Georges, Allan Wataka, Stephen Ondolo, Karen Cherono, Erick Odoyo, Lillian Musila
{"title":"Complete genome sequences of 12 lytic phages against multidrug-resistant <i>Enterococcus faecalis</i>.","authors":"Oumarou Soro, Collins Kigen, Andrew Nyerere, Moses Gachoya, James Wachira, Vanessa Onyonyi, Martin Georges, Allan Wataka, Stephen Ondolo, Karen Cherono, Erick Odoyo, Lillian Musila","doi":"10.1128/mra.00687-24","DOIUrl":"10.1128/mra.00687-24","url":null,"abstract":"<p><p>We report the genome sequences of 12 <i>Enterococcus faecalis</i> phages isolated in Kenya, belonging to the genus <i>Copernicusvirus</i>, <i>Efquatrovirus</i>, <i>Saphexavirus</i>, and <i>Kochikohdavirus</i>. They have double-stranded DNA with lengths varying from 17,979 to 147,374 bp and G+C content from 33.14% to 40.05%. The genomes contain 28-250 coding sequences.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465766/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142291267","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-genome sequencing and analysis of Streptococcus iniae strain isolated from the brain of tilapia (Oreochromis sp.). 从罗非鱼（Oreochromis sp.）脑中分离的猪链球菌菌株的全基因组测序和分析。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-10 Epub Date: 2024-09-16 DOI: 10.1128/mra.00493-24
Anan Safwat, Garrett L Ellward, Deborah B Pouder, Roy P E Yanong, Daniel M Czyż
{"title":"Whole-genome sequencing and analysis of <i>Streptococcus iniae</i> strain isolated from the brain of tilapia (<i>Oreochromis</i> sp.).","authors":"Anan Safwat, Garrett L Ellward, Deborah B Pouder, Roy P E Yanong, Daniel M Czyż","doi":"10.1128/mra.00493-24","DOIUrl":"10.1128/mra.00493-24","url":null,"abstract":"<p><p><i>Streptococcus iniae</i> is a bacterium that can infect fish, mammals, and humans. In this study, the <i>S. iniae</i>-313 strain was isolated from the brain of an infected tilapia, and the analysis of its sequenced genome is reported. The data revealed that <i>S. iniae</i>-313 carried antibiotic-resistant genes and virulence factors.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465879/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142291284","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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