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Genomic sequences of Mycobacterium smegmatis A cluster phages LBerry, Pembroke, and Zolita. 分枝杆菌 A 群噬菌体 LBerry、Pembroke 和 Zolita 的基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-08-13 Epub Date: 2024-07-09 DOI: 10.1128/mra.00504-24
Nathan E Berry, Marly S Cassford, Colby J Agostino, Ethan N Dionne, Olivia J Schmitt, Kristen A Butela, Deborah Jacobs-Sera, Joseph A DeGiorgis, Kathleen Cornely
{"title":"Genomic sequences of <i>Mycobacterium smegmatis</i> A cluster phages LBerry, Pembroke, and Zolita.","authors":"Nathan E Berry, Marly S Cassford, Colby J Agostino, Ethan N Dionne, Olivia J Schmitt, Kristen A Butela, Deborah Jacobs-Sera, Joseph A DeGiorgis, Kathleen Cornely","doi":"10.1128/mra.00504-24","DOIUrl":"10.1128/mra.00504-24","url":null,"abstract":"<p><p>LBerry, Pembroke, and Zolita are newly isolated bacteriophages that infect <i>Mycobacterium smegmatis</i> mc²155. Based on gene content similarity, LBerry and Pembroke are assigned to cluster A3, and Zolita is assigned to cluster A5. LBerry and Pembroke are 99% identical to Anaysia and Caviar, and Zolita is 99% identical to SydNat.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11320968/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141559127","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of Lactococcus garvieae isolated from a greater amberjack (Seriola dumerili) farmed in Japan in 2022. 2022R 年从日本养殖的大琥珀鱼（Seriola dumerili）中分离到的 Lactococcus garvieae 的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-08-13 Epub Date: 2024-07-16 DOI: 10.1128/mra.00436-24
Maiga Salif, Riku Ogawa, Aguri Mikami, Masanori Daibata, Masayuki Imajoh
{"title":"Complete genome sequence of <i>Lactococcus garvieae</i> isolated from a greater amberjack (<i>Seriola dumerili</i>) farmed in Japan in 2022.","authors":"Maiga Salif, Riku Ogawa, Aguri Mikami, Masanori Daibata, Masayuki Imajoh","doi":"10.1128/mra.00436-24","DOIUrl":"10.1128/mra.00436-24","url":null,"abstract":"<p><p>The complete genome sequence of <i>Lactococcus garvieae</i> KN22525, isolated in May 2022 from a diseased greater amberjack (<i>Seriola dumerili</i>) with a gross indication of body surface redness in Nomi Bay, Japan, was determined. Multilocus sequencing typing revealed that KN22525's genotype was sequence type ST95.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11320904/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141620438","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequence of Collimonas sp. strain H4R21, an effective mineral-weathering bacterial strain isolated from the beech rhizosphere. 从山毛榉根瘤中分离出的一种有效的矿物风化细菌 Collimonas sp.
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-08-13 Epub Date: 2024-07-22 DOI: 10.1128/mra.00308-24
Morin E, Uroz S, Kumar R, Rey M W, Pham J, Akum F, Leveau J H J
{"title":"Draft genome sequence of <i>Collimonas</i> sp. strain H4R21, an effective mineral-weathering bacterial strain isolated from the beech rhizosphere.","authors":"Morin E, Uroz S, Kumar R, Rey M W, Pham J, Akum F, Leveau J H J","doi":"10.1128/mra.00308-24","DOIUrl":"10.1128/mra.00308-24","url":null,"abstract":"<p><p>We present the draft genome sequence of <i>Collimonas</i> sp. strain H4R21, isolated from the rhizosphere of <i>Fagus sylvatica</i> in the forest experimental site of Montiers (France). This genome features coding capacity for plant growth promotion, such as the ability to solubilize minerals, to produce siderophores and antifungal secondary metabolites.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11320959/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141734599","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-genome sequences of Helicobacter pylori isolated from patients with high risk of gastric cancer in the Andes of Nariño, Colombia. 从哥伦比亚纳里尼奥安第斯山脉胃癌高危患者中分离出的幽门螺杆菌的全基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-08-13 Epub Date: 2024-07-22 DOI: 10.1128/mra.01232-23
Kevin Andres Guzman, Angi Paola Daza, Rudy Viviana Gomez, Lidia Madeline Montenegro, Alvaro Pazos
{"title":"Whole-genome sequences of <i>Helicobacter pylori</i> isolated from patients with high risk of gastric cancer in the Andes of Nariño, Colombia.","authors":"Kevin Andres Guzman, Angi Paola Daza, Rudy Viviana Gomez, Lidia Madeline Montenegro, Alvaro Pazos","doi":"10.1128/mra.01232-23","DOIUrl":"10.1128/mra.01232-23","url":null,"abstract":"<p><p>We sequenced the complete genomes of 16 <i>Helicobacter pylori</i> isolates obtained from patients residing in Nariño, Colombia. These isolates were collected from patients presenting various gastric lesions classified according to the Correa cascade classification. The genomic characterization of these isolates provides valuable insights into the structure, composition, and pathogenicity.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11320965/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141734605","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metagenome-assembled bacterial genomes derived from various aging flue-cured tobacco samples. 从各种陈年烟叶样品中提取的元基因组组装细菌基因组。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-08-13 Epub Date: 2024-07-22 DOI: 10.1128/mra.00427-24
Minghou Li, Yingjie Dong, Chen Liu, Haoran Liu, Zhen Wang, Jingru Ma, Xinhui Wang, Xiaojun Zhang
{"title":"Metagenome-assembled bacterial genomes derived from various aging flue-cured tobacco samples.","authors":"Minghou Li, Yingjie Dong, Chen Liu, Haoran Liu, Zhen Wang, Jingru Ma, Xinhui Wang, Xiaojun Zhang","doi":"10.1128/mra.00427-24","DOIUrl":"10.1128/mra.00427-24","url":null,"abstract":"<p><p>We recovered 16 bacterial metagenome-assembled genomes from 11 flue-cured tobacco samples with different aging stage and various geographic origins. Their sizes range from 2.3 M to 5.4 M, with GC contents of 43.17%-74.45%, completeness of 78.80%-99.25%, and contamination of 0.47%-8.56%.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11323803/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141734602","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome sequence of Methylobacterium fujisawaense strain C14, isolated from concrete. 从混凝土中分离出的 Methylobacterium fujisawaense 菌株 C14 的基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-08-13 Epub Date: 2024-07-02 DOI: 10.1128/mra.00531-24
E Anders Kiledal, Iz Moxley, Olga Shevchenko, Jennifer L Goff, Julia A Maresca
{"title":"Genome sequence of <i>Methylobacterium fujisawaense</i> strain C14, isolated from concrete.","authors":"E Anders Kiledal, Iz Moxley, Olga Shevchenko, Jennifer L Goff, Julia A Maresca","doi":"10.1128/mra.00531-24","DOIUrl":"10.1128/mra.00531-24","url":null,"abstract":"<p><p><i>Methylobacterium fujisawaense</i> strain C14 was isolated from a weathered concrete cylinder. Using PacBio sequencing, we generated a complete genome for strain C14, which includes one circular chromosome (6,656,731 bp) and six putative plasmids (35,452 to 85,428 bp).</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11320976/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141492613","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of Idiomarina sp. PL1-037 isolated from the pink hypersaline Pearse Lakes, Rottnest Island, Western Australia. 从西澳大利亚罗特内斯特岛粉红高盐皮尔斯湖分离的 Idiomarina sp.
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-08-13 Epub Date: 2024-07-05 DOI: 10.1128/mra.00157-24
Crystal E Young, Hussain Alattas, Colin Scott, Daniel V Murphy, Ravi Tiwari, Wayne G Reeve
{"title":"Complete genome sequence of <i>Idiomarina</i> sp. PL1-037 isolated from the pink hypersaline Pearse Lakes, Rottnest Island, Western Australia.","authors":"Crystal E Young, Hussain Alattas, Colin Scott, Daniel V Murphy, Ravi Tiwari, Wayne G Reeve","doi":"10.1128/mra.00157-24","DOIUrl":"10.1128/mra.00157-24","url":null,"abstract":"<p><p><i>Idiomarina</i> sp. PL1-037 was isolated from Pearse Lakes, Rottnest Island, Western Australia. The sequenced completed genome for PL1-037 is composed of a single chromosome (2,804,934  bp) with a GC content of 47.1%. Isolation of <i>Idiomarina</i> sp. PL1-037 provides insights about culturable extremophiles from the Pearse lakes microbiome.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11320950/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141534817","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genomes of two Variovorax endophytes isolated from surface-sterilized alfalfa nodules. 从表面灭菌的紫花苜蓿结节中分离出的两种 Variovorax 内生菌的完整基因组。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-08-13 Epub Date: 2024-07-05 DOI: 10.1128/mra.00336-24
Ann M Hirsch, Ethan Humm, Mila Rubbi, Giorgia Del Vecchio, Sung Min Ha, Matteo Pellegrini, Robert P Gunsalus
{"title":"Complete genomes of two <i>Variovorax</i> endophytes isolated from surface-sterilized alfalfa nodules.","authors":"Ann M Hirsch, Ethan Humm, Mila Rubbi, Giorgia Del Vecchio, Sung Min Ha, Matteo Pellegrini, Robert P Gunsalus","doi":"10.1128/mra.00336-24","DOIUrl":"10.1128/mra.00336-24","url":null,"abstract":"<p><p><i>Variovorax</i> species catabolize a wide range of natural and industrial products and have been shown to be integral rhizosphere inhabitants. Here, we report the complete genomes of <i>V. paradoxus</i> 2u118 and <i>V</i>. sp. SPNA7, which were isolated from alfalfa root nodules and possess plant growth-promoting properties.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11320970/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141534820","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome assemblies of three Klebsiella grimontii strains isolated from catheterized urine samples from the same male participant over the course of 6 months. 在 6 个月的时间里，从同一男性参与者的导尿管尿液样本中分离出的三株克雷伯氏菌的基因组组装草案。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-08-13 Epub Date: 2024-07-08 DOI: 10.1128/mra.00506-24
Helen Appleberry, Warwick Price, Lorenzo Roque, Evelyn Umana, Alan J Wolfe, Catherine Putonti, Alex Kula
{"title":"Draft genome assemblies of three <i>Klebsiella grimontii</i> strains isolated from catheterized urine samples from the same male participant over the course of 6 months.","authors":"Helen Appleberry, Warwick Price, Lorenzo Roque, Evelyn Umana, Alan J Wolfe, Catherine Putonti, Alex Kula","doi":"10.1128/mra.00506-24","DOIUrl":"10.1128/mra.00506-24","url":null,"abstract":"<p><p><i>Klebsiella grimontii</i> is a newly identified species within the <i>Klebsiella oxytoca</i> complex. Here, we present the draft genome sequence of three <i>K. grimontii</i> strains that were isolated from catheterized urine samples collected from a participant in a longitudinal study over ~6 months.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11320941/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141555187","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of Cereibacter sphaeroides f. sp. denitrificans strain IL106. Cereibacter sphaeroides f. sp. denitrificans strain IL106 的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-08-13 Epub Date: 2024-07-17 DOI: 10.1128/mra.00392-24
Emma K Stock, Kaziah J Terrell, Amiera A Rayyan, John A Kyndt
{"title":"Complete genome sequence of <i>Cereibacter sphaeroides</i> f. sp. denitrificans strain IL106.","authors":"Emma K Stock, Kaziah J Terrell, Amiera A Rayyan, John A Kyndt","doi":"10.1128/mra.00392-24","DOIUrl":"10.1128/mra.00392-24","url":null,"abstract":"<p><p><i>Cereibacter sphaeroides</i> is a non-sulfur purple bacterium, one of the most versatile and thoroughly studied species of its kind, can grow on a variety of compounds photoheterotrophically, and is often used in bioremediation. We present the complete genome of <i>Cereibacter sphaeroides</i> f. sp. denitrificans underscoring its unique features.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11321003/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141627153","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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