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Complete genome sequence of Cronobacter sakazakii ES191 generated by PacBio sequencing. 通过 PacBio 测序生成的阪崎肠杆菌 ES191 的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-08 DOI: 10.1128/mra.00473-24
Shuyan Wu, Ruy Jauregui, Paul Maclean, Gale Brightwell
{"title":"Complete genome sequence of <i>Cronobacter sakazakii</i> ES191 generated by PacBio sequencing.","authors":"Shuyan Wu, Ruy Jauregui, Paul Maclean, Gale Brightwell","doi":"10.1128/mra.00473-24","DOIUrl":"10.1128/mra.00473-24","url":null,"abstract":"<p><p>We present the complete genome of <i>Cronobacter sakazakii</i> ES191, isolated from New Zealand in 2011 and known for its strong biofilm ability. The genome consists of a 4,309,604-base pair (bp) circular chromosome (56.9% GC) and a 165,613-bp circular plasmid (55.4% GC).</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0047324"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636388/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142604730","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequences of six multidrug-resistant Escherichia coli isolates from pigeons in Bangladesh. 孟加拉国鸽子中分离出的六种耐多药大肠埃希菌的基因组序列草案。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-14 DOI: 10.1128/mra.01020-24
Mukta Das Gupta, Mishuk Shaha, Ashutosh Das
{"title":"Draft genome sequences of six multidrug-resistant <i>Escherichia coli</i> isolates from pigeons in Bangladesh.","authors":"Mukta Das Gupta, Mishuk Shaha, Ashutosh Das","doi":"10.1128/mra.01020-24","DOIUrl":"10.1128/mra.01020-24","url":null,"abstract":"<p><p>Household pigeons are a potential source of multidrug-resistant (<i>Escherichia coli</i> (<i>E. coli</i>) and act as a transmission vehicle of this bacterium to humans. Here, we characterized the antimicrobial resistance profile and molecular properties of the whole genome sequences of six <i>E. coli</i> strains from household pigeons.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0102024"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636324/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142624036","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of two Christensenella minuta strains CIP 112228 and CIP 112229, isolated from human fecal samples. 从人类粪便样本中分离出的两株 Christensenella minuta 菌株 CIP 112228 和 CIP 112229 的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-10-29 DOI: 10.1128/mra.00766-24
Christiane Bouchier, Gérald Touak, Damien Rei, Dominique Clermont
{"title":"Complete genome sequence of two <i>Christensenella minuta</i> strains CIP 112228 and CIP 112229, isolated from human fecal samples.","authors":"Christiane Bouchier, Gérald Touak, Damien Rei, Dominique Clermont","doi":"10.1128/mra.00766-24","DOIUrl":"10.1128/mra.00766-24","url":null,"abstract":"<p><p><i>Christensenella minuta</i> is one of the representative bacterial species of the human gut microbiome. We report the complete genome sequence of two strains, <i>Christensenella minuta</i> CIP 112228 and CIP 112229, isolated from two healthy volunteers.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0076624"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636353/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142522413","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Streptococcus agalactiae strain COH1 transcriptome in association with stem cell-derived brain-like endothelial cells. 与干细胞衍生的类脑内皮细胞相关的无乳链球菌 COH1 菌株转录组。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-11 DOI: 10.1128/mra.00455-24
Nadine Vollmuth, Till Sauerwein, Konrad U Foerstner, Alexander J Westermann, Alexandra Schubert-Unkmeir, Daryl W Lam, Brandon J Kim
{"title":"<i>Streptococcus agalactiae</i> strain COH1 transcriptome in association with stem cell-derived brain-like endothelial cells.","authors":"Nadine Vollmuth, Till Sauerwein, Konrad U Foerstner, Alexander J Westermann, Alexandra Schubert-Unkmeir, Daryl W Lam, Brandon J Kim","doi":"10.1128/mra.00455-24","DOIUrl":"10.1128/mra.00455-24","url":null,"abstract":"<p><p><i>Streptococcus agalactiae</i> (Group <i>B Streptococcus</i>) strain COH1 is a representative strain of serotype III, multi-locus sequence type 17, which is disproportionately associated with neonatal meningitis. Here we report the transcriptome of COH1 when interacting with human brain endothelial cells compared with COH1 alone.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0045524"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636360/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142623945","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of Sporosarcina pasteurii type strain DSM33. 巴氏孢子虫类型菌株 DSM33 的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-20 DOI: 10.1128/mra.00843-24
Matthew J Tuttle, Blake W Stamps, John L Chodkowski, Marco E Mechan-Llontop, Ashley Shade, Chia-Suei Hung, Maneesh K Gupta, Michael S Carter
{"title":"Complete genome sequence of <i>Sporosarcina pasteurii</i> type strain DSM33.","authors":"Matthew J Tuttle, Blake W Stamps, John L Chodkowski, Marco E Mechan-Llontop, Ashley Shade, Chia-Suei Hung, Maneesh K Gupta, Michael S Carter","doi":"10.1128/mra.00843-24","DOIUrl":"10.1128/mra.00843-24","url":null,"abstract":"<p><p>Here, we present the complete genome sequence of <i>Sporosarcina pasteurii</i> type strain DSM33, a model organism for microbially induced calcium carbonate precipitation. This genome consists of a single 3.3-Mb chromosome and is an improvement upon draft <i>S. pasteurii</i> genome sequences currently available in public databases.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0084324"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636376/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142676338","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Novel assembly of the SF370 strain of the important human pathogen Streptococcus pyogenes serotype M1.
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 DOI: 10.1128/mra.01197-24
Thomas Fabian Wulff, Rina Ahmed-Begrich, Karin Hahnke, Michael Jahn, Emmanuelle Charpentier
{"title":"Novel assembly of the SF370 strain of the important human pathogen <i>Streptococcus pyogenes</i> serotype M1.","authors":"Thomas Fabian Wulff, Rina Ahmed-Begrich, Karin Hahnke, Michael Jahn, Emmanuelle Charpentier","doi":"10.1128/mra.01197-24","DOIUrl":"https://doi.org/10.1128/mra.01197-24","url":null,"abstract":"<p><p>The important human pathogen <i>Streptococcus pyogenes</i> causes a wide range of diseases. Strain SF370 was the first fully sequenced strain of <i>S. pyogenes</i>, providing essential insights into the molecular mechanisms of disease. We present an improved genome assembly of strain SF370 from ATCC, which corrects long-standing errors in its genome.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0119724"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142813880","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-genome sequences of fermentative and spoilage-associated lactic acid bacteria, Lysinibacillus capsici and a Serratia marcescens isolated from commercial cucumber fermentations. 从商业黄瓜发酵过程中分离出的发酵和腐败相关乳酸菌、荚膜赖氨酸杆菌和一种侯氏沙雷氏菌的全基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-22 DOI: 10.1128/mra.00910-24
Clinton A Page, Sheron Simpson, Carol B M D'Souza, Ilenys M Pérez-Díaz, Adam R Rivers
{"title":"Whole-genome sequences of fermentative and spoilage-associated lactic acid bacteria, <i>Lysinibacillus capsici</i> and a <i>Serratia marcescens</i> isolated from commercial cucumber fermentations.","authors":"Clinton A Page, Sheron Simpson, Carol B M D'Souza, Ilenys M Pérez-Díaz, Adam R Rivers","doi":"10.1128/mra.00910-24","DOIUrl":"10.1128/mra.00910-24","url":null,"abstract":"<p><p>We report the annotated, whole-genome sequences of 16 bacteria isolated from commercial cucumber fermentations. The collection consists of nine fermentative and two spoilage-associated lactic acid bacteria, four <i>Lysinibacillus</i> strains, and a <i>Serratia marcescens</i>. Half the genome assemblies have fewer than 10 contigs, and the remainder have fewer than 30.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0091024"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11640280/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142687405","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metagenomic analysis reveals higher Coriobacteriia abundance in mare's milk consumers. 元基因组分析表明，母马乳消费者体内有较多的 Coriobacteriia。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-05 DOI: 10.1128/mra.00862-24
Nurislam Mukhanbetzhanov, Zharkyn Jarmukhanov, Samat Kozhakhmetov, Almagul Kushugulova
{"title":"Metagenomic analysis reveals higher <i>Coriobacteriia</i> abundance in mare's milk consumers.","authors":"Nurislam Mukhanbetzhanov, Zharkyn Jarmukhanov, Samat Kozhakhmetov, Almagul Kushugulova","doi":"10.1128/mra.00862-24","DOIUrl":"10.1128/mra.00862-24","url":null,"abstract":"<p><p>Our study reveals increased gut <i>Coriobacteriia</i> among mare's milk consumers; metagenomic analysis showed a higher prevalence of genera belonging to class <i>Coriobacteriia</i> in consumers vs non-consumers. This suggests interactions between traditional dairy practices and gut microbiome composition, indicating potential for microbiota modulation through dietary interventions.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0086224"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636347/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142582858","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The genomic and phylogenetic characterization of lytic Pseudomonas aeruginosa PAK bacteriophages BL4, BL6, and BL7 collected from aquatic samples. 从水生样本中收集的溶解性铜绿假单胞菌 PAK 噬菌体 BL4、BL6 和 BL7 的基因组和系统发育特征。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-04 DOI: 10.1128/mra.00954-24
Fahareen B Mosharraf, Austen Rowell, Lisa M Bono
{"title":"The genomic and phylogenetic characterization of lytic <i>Pseudomonas aeruginosa</i> PAK bacteriophages BL4, BL6, and BL7 collected from aquatic samples.","authors":"Fahareen B Mosharraf, Austen Rowell, Lisa M Bono","doi":"10.1128/mra.00954-24","DOIUrl":"10.1128/mra.00954-24","url":null,"abstract":"<p><p>Environmental phages infecting <i>Pseudomonas aeruginosa</i> PAK, an opportunistic pathogen, were isolated from playa lakes in Lubbock, TX. We present the genome sequence of three lytic bacteriophages. Upon analysis of sequence similarity, we identified the viruses as a part of an unclassified species within the genus <i>Pbunavirus</i> in the <i>Caudoviricetes</i> class.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0095424"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636371/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142569085","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metagenome-assembled genomes of freshwater Hyphomicrobium sp. G-191 and Methylophilus sp. enriched from Cedar Swamp, Woods Hole, MA. 马萨诸塞州伍兹霍尔雪松沼泽淡水嗜水菌 G-191 和嗜甲藻的元基因组组装。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-14 DOI: 10.1128/mra.00608-24
Yolanda Huang, Rebecca Schomer, María José Rodríguez Reyes, Kyle Costa, Rebecca E Parales, Rachel Whitaker, Scott C Dawson
{"title":"Metagenome-assembled genomes of freshwater <i>Hyphomicrobium</i> sp. G-191 and <i>Methylophilus</i> sp. enriched from Cedar Swamp, Woods Hole, MA.","authors":"Yolanda Huang, Rebecca Schomer, María José Rodríguez Reyes, Kyle Costa, Rebecca E Parales, Rachel Whitaker, Scott C Dawson","doi":"10.1128/mra.00608-24","DOIUrl":"10.1128/mra.00608-24","url":null,"abstract":"<p><p><i>Hyphomicrobium</i> are facultative denitrifying anaerobes capable of using one-carbon compounds as a sole carbon source. <i>Hyphomicrobium</i> sp. G-191 was enriched from Cedar Swamp, Woods Hole, Massachusetts, using a selective medium for methanol-utilizing bacteria. We present two draft metagenome-assembled genomes (MAGs) of a <i>Hyphomicrobium</i> and a <i>Methylophilus</i> species.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0060824"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636343/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142624061","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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