{"title":"Complete mitochondrial genome of <i>Melanabropsis tianmuica</i> (Anabropsinae: Anostostomatidae) from China.","authors":"Siyu Pang, Yingying Zhang, Yanting Qin, Xun Bian","doi":"10.1128/mra.00612-24","DOIUrl":"https://doi.org/10.1128/mra.00612-24","url":null,"abstract":"<p><p>The <i>Melanabropsis tianmuica</i> mitogenome was 15,696 bp in length and consisted of 13 protein-coding genes, 22 transfer RNA genes, and 2 ribosomal RNA genes. All 13 protein-coding genes started with the ATN codons and terminated with TAA/TAG, except <i>cox2</i> and <i>nad5</i>, which ended with incomplete T.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0061224"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160268","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alexander Balkin, Andrey Plotnikov, Tatiana Konnova, Natalia Gogoleva, Elena Shagimardanova, Yuri Gogolev
{"title":"Cappable-seq RNA-sequencing data sets for comparative studying of <i>Salmonella enterica</i> adaptation to <i>Acanthamoeba castellanii</i> intracellular environment, oxidative stress, and starvation.","authors":"Alexander Balkin, Andrey Plotnikov, Tatiana Konnova, Natalia Gogoleva, Elena Shagimardanova, Yuri Gogolev","doi":"10.1128/mra.01129-24","DOIUrl":"https://doi.org/10.1128/mra.01129-24","url":null,"abstract":"<p><p><i>Salmonella</i> is a foodborne pathogen that can survive various stresses and replicate inside protist cells. Here, we present high-resolution Cappable-seq transcriptomic data for <i>Salmonella enterica</i> 14028S under starvation and hydrogen peroxide treatment, as well as 8 and 15 h after <i>Acanthamoeba castellanii</i> uptake.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0112924"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160264","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Angelina Garcia Guzman, Andrea Orozco, Haleema Amin, Rüdiger Pukall, Markus Goeker, Natalia Ivanova, Rekha Seshadri, Tricia A Van Laar
{"title":"Draft genome sequence of <i>Dolosicoccus paucivorans</i> DSM 15742<sup>T</sup> isolated from a patient's blood in Cleveland, Ohio.","authors":"Angelina Garcia Guzman, Andrea Orozco, Haleema Amin, Rüdiger Pukall, Markus Goeker, Natalia Ivanova, Rekha Seshadri, Tricia A Van Laar","doi":"10.1128/mra.01296-24","DOIUrl":"https://doi.org/10.1128/mra.01296-24","url":null,"abstract":"<p><p>This study describes the whole genome sequence of <i>Dolosicoccus paucivorans</i> 2991-95 (DSM 15742) isolated from human blood in Cleveland, Ohio. The genome length is approximately 1.8 Mbp with 107 contigs and a G + C content of 37.91%. Annotation identified 1,752 coding genes and multiple virulence factors.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0129624"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160206","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Saisuki Putumbaka, Claire E Barrow, Farris L Poole, Michael W W Adams
{"title":"Genome sequence of <i>Cetobacterium somerae</i> ATCC BAA-474 isolated from human feces.","authors":"Saisuki Putumbaka, Claire E Barrow, Farris L Poole, Michael W W Adams","doi":"10.1128/mra.01196-24","DOIUrl":"https://doi.org/10.1128/mra.01196-24","url":null,"abstract":"<p><p><i>Cetobacterium somerae</i> ATCC BAA-474 was first isolated from human feces and is emerging as an important species for animal and human health. Here, we report the complete genome sequence of this strain of <i>C. somerae</i> to improve the currently available genome sequence.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0119624"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160208","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Rene Nieves-Morales, Jessica Alejandra Paez-Diaz, Sofia Marie Rodriguez-Carrio, Gabriela Melendez Martinez, Edwin Omar Rivera-Lopez, Josué Rodríguez-Ramos, José E García-Arrarás, Carlos Rios-Velazquez
{"title":"Intestinal microbiome profile of the brown rock sea cucumber (<i>Holothuria glaberrima</i>) using ITS and 16S rDNA amplicons from direct mechanical, enzymatic, and chemical metagenomic extraction.","authors":"Rene Nieves-Morales, Jessica Alejandra Paez-Diaz, Sofia Marie Rodriguez-Carrio, Gabriela Melendez Martinez, Edwin Omar Rivera-Lopez, Josué Rodríguez-Ramos, José E García-Arrarás, Carlos Rios-Velazquez","doi":"10.1128/mra.00293-25","DOIUrl":"https://doi.org/10.1128/mra.00293-25","url":null,"abstract":"<p><p>Using direct mechanical, enzymatic, and chemical extraction methods, the intestinal microbiome of the marine invertebrate <i>Holothuria glaberrima</i> was obtained. ITS and 16S rDNA regions were sequenced to enrich and investigate the prokaryotic and fungal diversity profiles from different anatomical regions within the sea cucumber's intestinal biology.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0029325"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160210","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Kayleigh Sines, Matthew Amoo, Joy Clarke, Kevin Kavanagh, Eddie McCullagh, Julie Renwick, David A Fitzpatrick
{"title":"Draft genome sequence of <i>Candida auris</i> MUTCD0001: the first clinical isolate from Ireland.","authors":"Kayleigh Sines, Matthew Amoo, Joy Clarke, Kevin Kavanagh, Eddie McCullagh, Julie Renwick, David A Fitzpatrick","doi":"10.1128/mra.00178-25","DOIUrl":"https://doi.org/10.1128/mra.00178-25","url":null,"abstract":"<p><p>Here, we report the draft genome sequence of <i>Candida auris</i> MUTCD0001, the first isolate of a human clinical specimen from Ireland. <i>C. auris</i> is a multidrug-resistant yeast, and studies of drug-resistant <i>C. auris</i> outbreaks have shown transmission among patients, demonstrating a need for improved epidemiological surveillance of <i>C. auris</i>.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0017825"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160271","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ekaterina Frantsuzova, Yulia Kocharovskaya, Anna Vetrova, Yanina Delegan, Alexander Bogun
{"title":"Complete genome sequence of <i>Gordonia rubripertincta</i> 112, a promising degrader of aromatic and aliphatic compounds.","authors":"Ekaterina Frantsuzova, Yulia Kocharovskaya, Anna Vetrova, Yanina Delegan, Alexander Bogun","doi":"10.1128/mra.00114-25","DOIUrl":"https://doi.org/10.1128/mra.00114-25","url":null,"abstract":"<p><p>The strain <i>Gordonia rubripertincta</i> 112 is a promising degrader of aromatic and aliphatic compounds. The genome of the strain was sequenced and completely assembled. It consists of a 5,108,631 bp circular chromosome (guanine-cytosine [GC] 67.34%) and two circular plasmids: pCP998 (99,888 bp, GC 64.81%) and pCP905 (90,599 bp, GC 65.89%).</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0011425"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160266","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Sujatha Srinivas, Jessica A Taylor, Su Xuan Gan, Prasha Maithani, Joao P A Pereyra, Rebecca J Case
{"title":"Draft genome of <i>Sagittula</i> sp. SSi028 isolated from the brown alga <i>Sargassum ilicifolium</i> in Singapore.","authors":"Sujatha Srinivas, Jessica A Taylor, Su Xuan Gan, Prasha Maithani, Joao P A Pereyra, Rebecca J Case","doi":"10.1128/mra.00269-25","DOIUrl":"https://doi.org/10.1128/mra.00269-25","url":null,"abstract":"<p><p><i>Sagittula</i> sp. SSi028 was isolated from the globally distributed brown alga <i>Sargassum ilicifolium</i>, which is the most abundant seaweed in Singapore. Its genome contains genes for two dimethylsulfoniopropionate assimilation pathways, degradation of lignin-related aromatic compounds, biosynthesis of multiple vitamin Bs, and <i>luxI-luxR</i> homologs associated with quorum sensing.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0026925"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160269","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Marjolein E Crooijmans, Johannes H de Winde, Dennis Claessen
{"title":"Draft genome sequences of a novel <i>Escherichia coli</i> K-12 MG1655 L-form strain and its evolved variant.","authors":"Marjolein E Crooijmans, Johannes H de Winde, Dennis Claessen","doi":"10.1128/mra.01283-24","DOIUrl":"https://doi.org/10.1128/mra.01283-24","url":null,"abstract":"<p><p>L-forms are bacterial variants capable of proliferating without a cell wall. In this evolution study, we present draft genome sequences of a novel <i>Escherichia coli</i> K-12 L-form strain and an evolved variant that exhibits enhanced growth. These draft sequences provide insights into the genetic adaptations associated with cell wall-independent growth.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0128324"},"PeriodicalIF":0.7,"publicationDate":"2025-05-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144151163","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Complete genome sequence of strain M4-SHS-6, a potential new member of the genus <i>Acidithiobacillus</i>.","authors":"Minjie Zhou, Tiantian Yu, Xiaomin Lan, Sidong Zhu, Jigang Chen","doi":"10.1128/mra.00152-25","DOIUrl":"https://doi.org/10.1128/mra.00152-25","url":null,"abstract":"<p><p>Here, we report the complete genome sequence of strain M4-SHS-6, a potential chemolithoautotrophic sulfur-oxidizing bacterium. The genome comprises one circular chromosome and two circular plasmids, assembled through hybrid sequencing (Illumina and Nanopore).</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0015225"},"PeriodicalIF":0.7,"publicationDate":"2025-05-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144151156","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}