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Genomic characterization of Orthonairovirus haemorrhagiae (Crimean-Congo hemorrhagic fever virus) outbreak in North Macedonia. 北马其顿爆发的 Orthonairovirus haemorrhagiae（克里米亚-刚果出血热病毒）的基因组特征。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-20 DOI: 10.1128/mra.00749-24
Golubinka Boshevska, Petra Emmerich, Ronald von Possel, Elizabeta Jancheska, Teodora Buzharova, Dragan Kochinski, Gábor Endre Tóth, Dániel Cadar, Dugagjin Osmani
{"title":"Genomic characterization of <i>Orthonairovirus haemorrhagiae</i> (Crimean-Congo hemorrhagic fever virus) outbreak in North Macedonia.","authors":"Golubinka Boshevska, Petra Emmerich, Ronald von Possel, Elizabeta Jancheska, Teodora Buzharova, Dragan Kochinski, Gábor Endre Tóth, Dániel Cadar, Dugagjin Osmani","doi":"10.1128/mra.00749-24","DOIUrl":"10.1128/mra.00749-24","url":null,"abstract":"<p><p>Crimean-Congo hemorrhagic fever virus (CCHFV) is a significant tick-borne virus causing severe hemorrhagic disease with high fatality rate. This report presents the genomic characterization of CCHFV strain from North Macedonia's first outbreak in over 50 years, emphasizing the importance of genomic surveillance in tracking virus evolution and spread patterns in this region.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0074924"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636234/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142676341","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome of halophilic Salinicoccus roseus H15 isolated from desert rock varnish in Ma'an, Jordan.
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 DOI: 10.1128/mra.00928-24
Sulaiman M Alnaimat, Saqr Abushattal, Saif M Dmour
{"title":"Draft genome of halophilic <i>Salinicoccus roseus</i> H15 isolated from desert rock varnish in Ma'an, Jordan.","authors":"Sulaiman M Alnaimat, Saqr Abushattal, Saif M Dmour","doi":"10.1128/mra.00928-24","DOIUrl":"https://doi.org/10.1128/mra.00928-24","url":null,"abstract":"<p><p>Here, we report the draft genome sequence of <i>Salinicoccus roseus</i> H15, isolated from desert rock varnish in Ma'an, Jordan. The genome size is 2,457,773 bp with a GC content of 49.31 mol%. The genome includes 3,064 genes and 135 carbohydrate-active enzymes, demonstrating adaptations for survival in extreme environments.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0092824"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142813878","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Vibrio cidicii genomes recovered from Baltic Sea samples in Denmark.
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 DOI: 10.1128/mra.01121-24
Yaovi Mahuton Gildas Hounmanou, Beau-Gard Jules Hougbenou, Victorien Tamegnon Dougnon, Jens-Andre Hammerl, Anders Dalsgaard
{"title":"<i>Vibrio cidicii</i> genomes recovered from Baltic Sea samples in Denmark.","authors":"Yaovi Mahuton Gildas Hounmanou, Beau-Gard Jules Hougbenou, Victorien Tamegnon Dougnon, Jens-Andre Hammerl, Anders Dalsgaard","doi":"10.1128/mra.01121-24","DOIUrl":"https://doi.org/10.1128/mra.01121-24","url":null,"abstract":"<p><p>We report the genomic characteristics of the human pathogen <i>Vibrio cidicii</i> isolated from seawater and green algae in the Baltic Sea. Initially misidentified as <i>Vibrio vulnificus</i> through culture and MALDI-TOF, whole-genome sequencing (WGS) confirmed them as <i>V. cidicii</i>, highlighting the importance of WGS analysis in accurate classification of emerging pathogens.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0112124"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142813875","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequences of Corynebacterium mastitidis strains isolated from ocular surface of CD36-knockout mice (B6.129S1-Cd36tm1Mfe/J) with keratitis.
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 DOI: 10.1128/mra.00562-24
Anthony Mannion, Zeli Shen, Ellen Buckley-Jordan, Alexis Garcia, Claire Lyons, Yao Lee, Magalie Boucher, Sebastian Carrasco, Michael S Gilmore, James G Fox
{"title":"Draft genome sequences of <i>Corynebacterium mastitidis</i> strains isolated from ocular surface of CD36-knockout mice (B6.129S1-<i>Cd36<sup>tm1Mfe</sup></i>/J) with keratitis.","authors":"Anthony Mannion, Zeli Shen, Ellen Buckley-Jordan, Alexis Garcia, Claire Lyons, Yao Lee, Magalie Boucher, Sebastian Carrasco, Michael S Gilmore, James G Fox","doi":"10.1128/mra.00562-24","DOIUrl":"https://doi.org/10.1128/mra.00562-24","url":null,"abstract":"<p><p>Three <i>Corynebacterium mastitidis</i> strains were cultured from the eyes of CD36-knockout mice (B6.129S1-<i>Cd36<sup>tm1Mfe</sup></i>/J) with and without keratitis housed at a biomedical research institute. Bacteria were sequenced using Illumina MiSeq technology for subsequent phylogenetic characterization and identification of virulence factor genes conferring pathogenic potential.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0056224"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142813879","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequences of mycobacteriophages Ashwin from cluster O and Chanagan from cluster A1. O 群的 Ashwin 和 A1 群的 Chanagan 分枝杆菌的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-14 DOI: 10.1128/mra.01028-24
Edith Erika Machowski, Khel Gordhan, Chandni Madhav, Christopher Ealand, Bavesh Kana
{"title":"Complete genome sequences of mycobacteriophages Ashwin from cluster O and Chanagan from cluster A1.","authors":"Edith Erika Machowski, Khel Gordhan, Chandni Madhav, Christopher Ealand, Bavesh Kana","doi":"10.1128/mra.01028-24","DOIUrl":"10.1128/mra.01028-24","url":null,"abstract":"<p><p>Ashwin and Chanagan are double-stranded <i>siphoviral</i> mycobacteriophages isolated from a single soil sample from a lavender flowerpot in Johannesburg, South Africa. Both are capable of infecting and lyzing <i>Mycobacterium smegmatis</i> and are predicted to contain 122 and 91 open reading frames, respectively, most without known function.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0102824"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636230/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142623957","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequence of Ferrimicrobium acidiphilum strain YE2023, isolated from a pulp of bioleach reactor. 从生物浸出反应器的纸浆中分离出的酸性铁菌菌株 YE2023 的基因组序列草案。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-12 DOI: 10.1128/mra.00895-24
Yulia A Elkina, Aleksandr G Bulaev, Alexey V Beletsky, Andrey V Mardanov
{"title":"Draft genome sequence of <i>Ferrimicrobium acidiphilum</i> strain YE2023, isolated from a pulp of bioleach reactor.","authors":"Yulia A Elkina, Aleksandr G Bulaev, Alexey V Beletsky, Andrey V Mardanov","doi":"10.1128/mra.00895-24","DOIUrl":"10.1128/mra.00895-24","url":null,"abstract":"<p><p>We report the draft genome sequence of <i>Ferrimicrobium acidiphilum</i> strain YE2023, isolated from a pulp of a laboratory-scale bioleach reactor. The genome is 3,221,954 Mbp long with a guanine-cytosine content of 58.16%.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0089524"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636282/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142624030","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of Promicromonospora sp. strain Populi, an actinobacterium isolated from Populus trichocarpa rhizosphere. 从杨树根瘤中分离出的一种放线菌 Promicromonospora sp.
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-10-29 DOI: 10.1128/mra.00851-24
Mircea Podar, Leah H Hochanadel, William G Alexander, Christopher W Schadt, Dale A Pelletier
{"title":"Complete genome sequence of <i>Promicromonospora</i> sp. strain Populi<i>,</i> an actinobacterium isolated from <i>Populus trichocarpa</i> rhizosphere.","authors":"Mircea Podar, Leah H Hochanadel, William G Alexander, Christopher W Schadt, Dale A Pelletier","doi":"10.1128/mra.00851-24","DOIUrl":"10.1128/mra.00851-24","url":null,"abstract":"<p><p><i>Promicromonospora</i> sp. strain Populi is an actinobacterium isolated from the rhizosphere of a black cottonwood tree, <i>Populus trichocarpa</i>. We completely sequenced its 5.2-Mbp chromosome using Oxford Nanopore long reads and predicted it to encode 4,685 proteins, 3 rRNA operons, and 54 tRNAs and noncoding RNAs.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0085124"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636086/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142522410","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome sequences of dengue virus serotypes 2, 3, and 4 isolated from adult patients in Thailand. 从泰国成年患者身上分离出的登革热病毒血清型 2、3 和 4 的基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-10-29 DOI: 10.1128/mra.00522-24
Adisak Songjaeng, Kwanrutai Chin-Inmanu, Phitchapha Proykhunthod, Ranyikar Poraha, Preeyanuch Sayboonruan, Dararat Prayongkul, Dumrong Mairiang, Yupin Suputtamongkol, Nasikarn Angkasekwinai, Nuntaya Punyadee, Panisadee Avirutnan
{"title":"Genome sequences of dengue virus serotypes 2, 3, and 4 isolated from adult patients in Thailand.","authors":"Adisak Songjaeng, Kwanrutai Chin-Inmanu, Phitchapha Proykhunthod, Ranyikar Poraha, Preeyanuch Sayboonruan, Dararat Prayongkul, Dumrong Mairiang, Yupin Suputtamongkol, Nasikarn Angkasekwinai, Nuntaya Punyadee, Panisadee Avirutnan","doi":"10.1128/mra.00522-24","DOIUrl":"10.1128/mra.00522-24","url":null,"abstract":"<p><p>Here, we present the genome sequences of dengue viruses (DENV) isolated from adult patients in Thailand during 2016-2017: DENV2 (412749), DENV3 (416384), and DENV4 (416709). These sequences provide valuable genetic and evolutionary information for dengue research and antiviral development.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0052224"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636373/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142522420","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome sequences of recombinant African swine fever virus isolated from domestic pigs in Vietnam. 从越南家猪中分离出的重组非洲猪瘟病毒的基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-18 DOI: 10.1128/mra.00821-24
Diep Van Nguyen, Ngoc Thi Nguyen, Duc Van Nguyen, Tham Thi Bui, Tiep Ngoc Tran
{"title":"Genome sequences of recombinant <i>African swine fever virus</i> isolated from domestic pigs in Vietnam.","authors":"Diep Van Nguyen, Ngoc Thi Nguyen, Duc Van Nguyen, Tham Thi Bui, Tiep Ngoc Tran","doi":"10.1128/mra.00821-24","DOIUrl":"10.1128/mra.00821-24","url":null,"abstract":"<p><p>African swine fever is a highly contagious and devastating disease of pigs. Here, we present the draft genome assemblies of three Vietnamese <i>African</i> s<i>wine fever virus</i> (ASFV) isolates: rASF1/2-avac02, rASF1/2-avac03, and rASF1/2-avac07. All isolates were closely related to the Chinese recombinant ASFV strains of genotypes I and II.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0082124"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636348/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142647839","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome sequences of antimicrobial-resistant Campylobacter coli and Campylobacter jejuni, isolated from poultry in Ukraine. 从乌克兰家禽中分离出的抗菌大肠弯曲杆菌和空肠弯曲杆菌的基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-12-12 Epub Date: 2024-11-21 DOI: 10.1128/mra.00795-24
Ihor Halka, Natalia Shchur, Eric Bortz, Svitlana Mandyhra, Vitalii Nedosekov, Orest Katsaraba, Ian Goodfellow, Devin M Drown, Ganna Kovalenko
{"title":"Genome sequences of antimicrobial-resistant <i>Campylobacter coli</i> and <i>Campylobacter jejuni</i>, isolated from poultry in Ukraine.","authors":"Ihor Halka, Natalia Shchur, Eric Bortz, Svitlana Mandyhra, Vitalii Nedosekov, Orest Katsaraba, Ian Goodfellow, Devin M Drown, Ganna Kovalenko","doi":"10.1128/mra.00795-24","DOIUrl":"10.1128/mra.00795-24","url":null,"abstract":"<p><p>Genomes of a <i>Campylobacter coli</i> OR12-like strain ChP2023 (1,713,995 bp) isolated from broiler chicken and <i>Campylobacter jejuni</i> subsp. <i>jejuni</i> NCTC 11168R-like strain KF2023 (1,729,995 bp) isolated from turkey, from poultry production facilities in Ukraine in 2023, were sequenced using Oxford Nanopore Technologies. Both genomes included antibiotic resistance genes and other virulence factors.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0079524"},"PeriodicalIF":0.7,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636359/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142682207","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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