{"title":"Complete genome of <i>Streptococcus agalactiae</i> strain XM_1.","authors":"Yingzhu Guo, Yao Zhu, Xinzhu Lin, Dai Wang","doi":"10.1128/mra.00328-24","DOIUrl":"10.1128/mra.00328-24","url":null,"abstract":"<p><p><i>Streptococcus agalactiae</i> can cause a variety of human diseases, posing a deadly threat especially in the case of infections in newborns. A strain of <i>Streptococcus agalactiae</i>, designated as XM_1, was isolated from a newborn with severe clinical symptoms. Here, the genome sequence of <i>Streptococcus agalactiae</i> strain XM_1 is presented.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465880/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142133191","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Felipe de Paula Nogueira Cruz, Paulo Henrique Marques de Andrade, Cristina Paiva de Sousa, Paulo Teixeira Lacava
{"title":"Draft genome sequence of <i>Bacillus velezensis</i> endophytically isolated from roots of <i>Polygala paniculata</i>.","authors":"Felipe de Paula Nogueira Cruz, Paulo Henrique Marques de Andrade, Cristina Paiva de Sousa, Paulo Teixeira Lacava","doi":"10.1128/mra.00826-24","DOIUrl":"10.1128/mra.00826-24","url":null,"abstract":"<p><p><i>Polygala paniculata</i> is a medicinal plant that harbors a remaining unknown microbiome. Those plants are known for their analgesic and anti-inflammatory properties and are widely found in the Brazilian Atlantic Forest. Herein, we report the isolation of the endophyte <i>Bacillus velezensis</i> GPP30 with a draft genome estimated at 4.0 Mpb.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465904/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142291272","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Draft genome sequence of two <i>Aspergillus aculeatus</i> isolated from cashew nuts from coastal Kenya.","authors":"Manase Onyango Aloo, Pauline Wambui Gachanja, Eugene Mwanza Muzami, Kyalo Katua, Dennis Wamalabe Mukhebi, Colletah Rhoda Musangi, Bicko Steve Juma, Wilton Mwema Mbinda","doi":"10.1128/mra.00460-24","DOIUrl":"10.1128/mra.00460-24","url":null,"abstract":"<p><p><i>Aspergillus aculeatus</i> is a common saprophyte and ubiquitous fungus belonging to section <i>Nigri</i>. They produce diverse secondary metabolites which are important in biological processes and industrial applications. We present the draft genome sequences of two <i>A. aculeatus</i> isolated from cashew nuts from coastal Kenya.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465715/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142291274","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Iryna V Goraichuk, James F Davis, Claudio L Afonso, David L Suarez
{"title":"Sequencing of historic samples provides complete coding sequences of chicken calicivirus from the United States.","authors":"Iryna V Goraichuk, James F Davis, Claudio L Afonso, David L Suarez","doi":"10.1128/mra.00777-24","DOIUrl":"10.1128/mra.00777-24","url":null,"abstract":"<p><p>Here, we report the coding-complete genomic sequences of two chicken caliciviruses from US poultry flocks in 2003 and 2004. They show the same genomic organization as that of other members of the <i>Bavovirus</i> genus and have the highest nucleotide identity (~88%) with strains from clinically normal chickens from Germany in 2004 and Netherlands in 2019.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465789/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142291281","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ashley Barkley, Kermisha Felix, Luke Myers, Nana Y D Ankrah
{"title":"Genome sequence of <i>Bacillus pumilus</i> RI06-95 isolated during a <i>Microcystis</i> bloom in lake Champlain, USA.","authors":"Ashley Barkley, Kermisha Felix, Luke Myers, Nana Y D Ankrah","doi":"10.1128/mra.00713-24","DOIUrl":"10.1128/mra.00713-24","url":null,"abstract":"<p><p>Here, we present the complete genome sequence of <i>Bacillus pumilus</i> RI06-95 isolated during a <i>Microcystis</i> bloom in Lake Champlain. The assembled genome comprises a 3.8 Mbp chromosome with a GC content of 42%, and two plasmids, pPZZ84 6.4 Kbp, GC content 37% and pSHB9 97Kbp, GC content 36%.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465950/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142109405","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Metagenome from ACT-3/CF: an anaerobic chloroform-degrading microbial community.","authors":"Olivia Bulka, Elizabeth Edwards","doi":"10.1128/mra.00674-24","DOIUrl":"10.1128/mra.00674-24","url":null,"abstract":"<p><p>Here, we present the metagenome of an anaerobic chloroform respiring mixed microbial community used for bioremediation. Our objective was to obtain draft genomes of key microorganisms in the culture.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465736/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142291279","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ann M Hirsch, Noor Khan, Ethan Humm, Mila Rubbi, Giorgia Del Vecchio, Sung Min Ha, Matteo Pellegrini, Robert P Gunsalus
{"title":"Genome of <i>Dietzia cinnamea</i> 55, a desert-isolated microbe with plant growth-promoting properties for grain crops.","authors":"Ann M Hirsch, Noor Khan, Ethan Humm, Mila Rubbi, Giorgia Del Vecchio, Sung Min Ha, Matteo Pellegrini, Robert P Gunsalus","doi":"10.1128/mra.00257-24","DOIUrl":"10.1128/mra.00257-24","url":null,"abstract":"<p><p>Here, we report the genome sequence of <i>Dietzia cinnamea</i> 55, isolated from the Negev Desert, Israel. <i>D. cinnamea</i> 55 was found to promote the growth of several cereal crops (corn, wheat, and pearl millet) in greenhouse and field studies.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465666/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142291277","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Complete genome sequence of two isolates from long-term serial cultivation of <i>Escherichia coli</i> JCM 5491.","authors":"So Umekage","doi":"10.1128/mra.00414-24","DOIUrl":"10.1128/mra.00414-24","url":null,"abstract":"<p><p>Here, I report the complete genome sequences of two <i>Escherichia coli</i> JCM5491 mutants that were independently isolated from different lineages after approximately 9 years of long-term serial cultivation.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465871/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142080877","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Sangmin Lee, Yeongjun Kim, Jeong A Han, Ho-Seok Lee, Eun Yu Kim
{"title":"Complete genome sequence of bacterium <i>Peribacillus simplex</i> strain IMGN11 from soil.","authors":"Sangmin Lee, Yeongjun Kim, Jeong A Han, Ho-Seok Lee, Eun Yu Kim","doi":"10.1128/mra.00643-24","DOIUrl":"10.1128/mra.00643-24","url":null,"abstract":"<p><p>We report the complete genome sequence of <i>Peribacillus simplex</i>, a spore-forming bacterium originally classified within the <i>Bacillus</i> genus. <i>Peribacillus simplex</i> exhibits antibiotic, plant growth-promoting, and xenobiotic-degrading activities and resistance to environmental contamination. The genome sequence of <i>Peribacillus simplex</i> will provide insights into its capabilities and potential as a biocontrol agent.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465765/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142154519","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Draft genome sequence of 16 <i>Aspergillus flavus</i> isolated from cashew nuts from coastal Kenya.","authors":"Pauline Wambui Gachanja, Manase Aloo Onyango, Colletah Rhoda Musangi, Bicko Steve Juma, Dennis Wamalabe Mukhebi, Eugene Mwanza Muzami, Kyalo Katua, Wilton Mwema Mbinda","doi":"10.1128/mra.00445-24","DOIUrl":"10.1128/mra.00445-24","url":null,"abstract":"<p><p><i>Aspergillus flavus</i> is a soil-borne fungus known for its aflatoxin contamination of agricultural products. Here, we report the draft genome sequences of 16 predicted aflatoxin-producing <i>A. flavus</i> isolated from cashew nuts from coastal Kenya.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465796/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142154522","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}