Angelina Garcia Guzman, Andrea Orozco, Haleema Amin, Rüdiger Pukall, Markus Goeker, Natalia Ivanova, Rekha Seshadri, Tricia A Van Laar
{"title":"Draft genome sequence of <i>Dolosicoccus paucivorans</i> DSM 15742<sup>T</sup> isolated from a patient's blood in Cleveland, Ohio.","authors":"Angelina Garcia Guzman, Andrea Orozco, Haleema Amin, Rüdiger Pukall, Markus Goeker, Natalia Ivanova, Rekha Seshadri, Tricia A Van Laar","doi":"10.1128/mra.01296-24","DOIUrl":"https://doi.org/10.1128/mra.01296-24","url":null,"abstract":"<p><p>This study describes the whole genome sequence of <i>Dolosicoccus paucivorans</i> 2991-95 (DSM 15742) isolated from human blood in Cleveland, Ohio. The genome length is approximately 1.8 Mbp with 107 contigs and a G + C content of 37.91%. Annotation identified 1,752 coding genes and multiple virulence factors.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0129624"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160206","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Saisuki Putumbaka, Claire E Barrow, Farris L Poole, Michael W W Adams
{"title":"Genome sequence of <i>Cetobacterium somerae</i> ATCC BAA-474 isolated from human feces.","authors":"Saisuki Putumbaka, Claire E Barrow, Farris L Poole, Michael W W Adams","doi":"10.1128/mra.01196-24","DOIUrl":"https://doi.org/10.1128/mra.01196-24","url":null,"abstract":"<p><p><i>Cetobacterium somerae</i> ATCC BAA-474 was first isolated from human feces and is emerging as an important species for animal and human health. Here, we report the complete genome sequence of this strain of <i>C. somerae</i> to improve the currently available genome sequence.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0119624"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160208","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Rene Nieves-Morales, Jessica Alejandra Paez-Diaz, Sofia Marie Rodriguez-Carrio, Gabriela Melendez Martinez, Edwin Omar Rivera-Lopez, Josué Rodríguez-Ramos, José E García-Arrarás, Carlos Rios-Velazquez
{"title":"Intestinal microbiome profile of the brown rock sea cucumber (<i>Holothuria glaberrima</i>) using ITS and 16S rDNA amplicons from direct mechanical, enzymatic, and chemical metagenomic extraction.","authors":"Rene Nieves-Morales, Jessica Alejandra Paez-Diaz, Sofia Marie Rodriguez-Carrio, Gabriela Melendez Martinez, Edwin Omar Rivera-Lopez, Josué Rodríguez-Ramos, José E García-Arrarás, Carlos Rios-Velazquez","doi":"10.1128/mra.00293-25","DOIUrl":"https://doi.org/10.1128/mra.00293-25","url":null,"abstract":"<p><p>Using direct mechanical, enzymatic, and chemical extraction methods, the intestinal microbiome of the marine invertebrate <i>Holothuria glaberrima</i> was obtained. ITS and 16S rDNA regions were sequenced to enrich and investigate the prokaryotic and fungal diversity profiles from different anatomical regions within the sea cucumber's intestinal biology.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0029325"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160210","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Kayleigh Sines, Matthew Amoo, Joy Clarke, Kevin Kavanagh, Eddie McCullagh, Julie Renwick, David A Fitzpatrick
{"title":"Draft genome sequence of <i>Candida auris</i> MUTCD0001: the first clinical isolate from Ireland.","authors":"Kayleigh Sines, Matthew Amoo, Joy Clarke, Kevin Kavanagh, Eddie McCullagh, Julie Renwick, David A Fitzpatrick","doi":"10.1128/mra.00178-25","DOIUrl":"https://doi.org/10.1128/mra.00178-25","url":null,"abstract":"<p><p>Here, we report the draft genome sequence of <i>Candida auris</i> MUTCD0001, the first isolate of a human clinical specimen from Ireland. <i>C. auris</i> is a multidrug-resistant yeast, and studies of drug-resistant <i>C. auris</i> outbreaks have shown transmission among patients, demonstrating a need for improved epidemiological surveillance of <i>C. auris</i>.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0017825"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160271","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ekaterina Frantsuzova, Yulia Kocharovskaya, Anna Vetrova, Yanina Delegan, Alexander Bogun
{"title":"Complete genome sequence of <i>Gordonia rubripertincta</i> 112, a promising degrader of aromatic and aliphatic compounds.","authors":"Ekaterina Frantsuzova, Yulia Kocharovskaya, Anna Vetrova, Yanina Delegan, Alexander Bogun","doi":"10.1128/mra.00114-25","DOIUrl":"https://doi.org/10.1128/mra.00114-25","url":null,"abstract":"<p><p>The strain <i>Gordonia rubripertincta</i> 112 is a promising degrader of aromatic and aliphatic compounds. The genome of the strain was sequenced and completely assembled. It consists of a 5,108,631 bp circular chromosome (guanine-cytosine [GC] 67.34%) and two circular plasmids: pCP998 (99,888 bp, GC 64.81%) and pCP905 (90,599 bp, GC 65.89%).</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0011425"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160266","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Sujatha Srinivas, Jessica A Taylor, Su Xuan Gan, Prasha Maithani, Joao P A Pereyra, Rebecca J Case
{"title":"Draft genome of <i>Sagittula</i> sp. SSi028 isolated from the brown alga <i>Sargassum ilicifolium</i> in Singapore.","authors":"Sujatha Srinivas, Jessica A Taylor, Su Xuan Gan, Prasha Maithani, Joao P A Pereyra, Rebecca J Case","doi":"10.1128/mra.00269-25","DOIUrl":"https://doi.org/10.1128/mra.00269-25","url":null,"abstract":"<p><p><i>Sagittula</i> sp. SSi028 was isolated from the globally distributed brown alga <i>Sargassum ilicifolium</i>, which is the most abundant seaweed in Singapore. Its genome contains genes for two dimethylsulfoniopropionate assimilation pathways, degradation of lignin-related aromatic compounds, biosynthesis of multiple vitamin Bs, and <i>luxI-luxR</i> homologs associated with quorum sensing.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0026925"},"PeriodicalIF":0.7,"publicationDate":"2025-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144160269","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Marjolein E Crooijmans, Johannes H de Winde, Dennis Claessen
{"title":"Draft genome sequences of a novel <i>Escherichia coli</i> K-12 MG1655 L-form strain and its evolved variant.","authors":"Marjolein E Crooijmans, Johannes H de Winde, Dennis Claessen","doi":"10.1128/mra.01283-24","DOIUrl":"https://doi.org/10.1128/mra.01283-24","url":null,"abstract":"<p><p>L-forms are bacterial variants capable of proliferating without a cell wall. In this evolution study, we present draft genome sequences of a novel <i>Escherichia coli</i> K-12 L-form strain and an evolved variant that exhibits enhanced growth. These draft sequences provide insights into the genetic adaptations associated with cell wall-independent growth.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0128324"},"PeriodicalIF":0.7,"publicationDate":"2025-05-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144151163","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Complete genome sequence of strain M4-SHS-6, a potential new member of the genus <i>Acidithiobacillus</i>.","authors":"Minjie Zhou, Tiantian Yu, Xiaomin Lan, Sidong Zhu, Jigang Chen","doi":"10.1128/mra.00152-25","DOIUrl":"https://doi.org/10.1128/mra.00152-25","url":null,"abstract":"<p><p>Here, we report the complete genome sequence of strain M4-SHS-6, a potential chemolithoautotrophic sulfur-oxidizing bacterium. The genome comprises one circular chromosome and two circular plasmids, assembled through hybrid sequencing (Illumina and Nanopore).</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0015225"},"PeriodicalIF":0.7,"publicationDate":"2025-05-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144151156","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Michael Zeller, Jennifer Chang, Giovani Trevisan, Phillip C Gauger, Jianqiang Zhang
{"title":"Nextclade data set for the ORF5-based lineage classification of PRRSV-1.","authors":"Michael Zeller, Jennifer Chang, Giovani Trevisan, Phillip C Gauger, Jianqiang Zhang","doi":"10.1128/mra.00303-25","DOIUrl":"https://doi.org/10.1128/mra.00303-25","url":null,"abstract":"<p><p>A Nextclade data set for PRRSV-1 ORF5 based on a global nomenclature for standardized lineage classification was developed. This tool enables rapid sequence analysis, visualization, and comparison with reference strains and vaccines. By providing accessibility, it facilitates broader adoption of PRRSV-1 classification frameworks for research and surveillance.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0030325"},"PeriodicalIF":0.7,"publicationDate":"2025-05-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144151167","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tamara Aleksandrzak-Piekarczyk, Jakub Grzesiak, Jan Gawor, Katarzyna Kosiorek
{"title":"Genome sequences of polar <i>Carnobacterium maltaromaticum</i> strains 2857 and 2862 with genes for glycerol and 1,2-propanediol pathways.","authors":"Tamara Aleksandrzak-Piekarczyk, Jakub Grzesiak, Jan Gawor, Katarzyna Kosiorek","doi":"10.1128/mra.00283-25","DOIUrl":"https://doi.org/10.1128/mra.00283-25","url":null,"abstract":"<p><p>We report genome sequences of two polar <i>Carnobacterium maltaromaticum</i> strains: 2857 (draft, 3.54 Mb, 34.4% GC) and 2862 (complete, 3.61 Mb, 34.6% GC, five plasmids). Sequencing used Illumina (both) and Nanopore (2862). Genome analysis revealed genes for glycerol conversion to 1,2-propanediol, suggesting potential for sustainable bioprocessing in cold environments.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0028325"},"PeriodicalIF":0.7,"publicationDate":"2025-05-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144151166","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}