Microbiology Resource Announcements最新文献

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Rare BK polyomavirus subtype III detected in hematopoietic cell transplant recipient. 在造血细胞移植受者体内检测到罕见的 BK 多瘤病毒 III 亚型。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-11-12 Epub Date: 2024-09-30 DOI: 10.1128/mra.00676-24
Tiana A Walder, Elizabeth A Odegard, Heidi L Meeds, Steven B Kleiboeker, Assem Ziady, Anthony Sabulski, Sonata Jodele, Alix E Seif, Stella M Davies, Benjamin L Laskin, Jason T Blackard
{"title":"Rare BK polyomavirus subtype III detected in hematopoietic cell transplant recipient.","authors":"Tiana A Walder, Elizabeth A Odegard, Heidi L Meeds, Steven B Kleiboeker, Assem Ziady, Anthony Sabulski, Sonata Jodele, Alix E Seif, Stella M Davies, Benjamin L Laskin, Jason T Blackard","doi":"10.1128/mra.00676-24","DOIUrl":"10.1128/mra.00676-24","url":null,"abstract":"<p><p>BK polyomavirus (BKPyV) is associated with disease in transplant patients. BKPyV genomic diversity is thought to contribute to functional differences in virulence factors. Here, we present the near full-length BKPyV genome sequence from a patient who underwent hematopoietic cell transplant and was infected with subtype III, a rare subtype.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142350044","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The complete genome sequence of a Paenibacillus tundrae strain MLY93 isolated from spot disease-infected tobacco leaves in China. 从中国受斑点病感染的烟草叶片中分离出的冻干百日咳杆菌菌株 MLY93 的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-11-12 Epub Date: 2024-09-26 DOI: 10.1128/mra.00221-24
Guan Lin, Xianhai Yang, Dong Xiang, Lei Yang, Yong Liu, Huilin Zhang, Shiwang Liu
{"title":"The complete genome sequence of a <i>Paenibacillus tundrae</i> strain MLY93 isolated from spot disease-infected tobacco leaves in China.","authors":"Guan Lin, Xianhai Yang, Dong Xiang, Lei Yang, Yong Liu, Huilin Zhang, Shiwang Liu","doi":"10.1128/mra.00221-24","DOIUrl":"10.1128/mra.00221-24","url":null,"abstract":"<p><p>This study presents the complete gene sequence of a <i>Paenibacillus tundrae</i> strain isolated from tobacco spot disease leaves in Xingyi, Guizhou Province, China. The genetic understanding of <i>P. tundrae</i> is advanced by this research.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142350045","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metagenomes and metagenome assembled genomes from anaerobic digesters at three Canadian pulp and paper mills. 来自加拿大三家纸浆和造纸厂厌氧消化器的元基因组和元基因组组装基因组。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-11-12 Epub Date: 2024-10-07 DOI: 10.1128/mra.00561-24
Camilla L Nesbø, Minqing Ivy Yang, Anupama Achal Sharan, Torsten Meyer, Elizabeth A Edwards
{"title":"Metagenomes and metagenome assembled genomes from anaerobic digesters at three Canadian pulp and paper mills.","authors":"Camilla L Nesbø, Minqing Ivy Yang, Anupama Achal Sharan, Torsten Meyer, Elizabeth A Edwards","doi":"10.1128/mra.00561-24","DOIUrl":"10.1128/mra.00561-24","url":null,"abstract":"<p><p>We present a dataset of six metagenomes and 323 metagenome assembled genomes (MAGs) describing the microbial community of anaerobic digesters at three Canadian pulp and paper mills. Our objective was to assess the coding potential of the microbial community and obtain draft genomes of key organisms in the digesters.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142381268","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of Serratia plymuthica SWSY-3.47. Serratia plymuthica SWSY-3.47 的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-11-12 Epub Date: 2024-10-14 DOI: 10.1128/mra.00815-24
Himari Takahashi, Tomoro Warashina, Yui Takahashi, Mayuki Tanaka, Kazushi Suzuki, Teppei Morita, Kazuharu Arakawa
{"title":"Complete genome sequence of <i>Serratia plymuthica</i> SWSY-3.47.","authors":"Himari Takahashi, Tomoro Warashina, Yui Takahashi, Mayuki Tanaka, Kazushi Suzuki, Teppei Morita, Kazuharu Arakawa","doi":"10.1128/mra.00815-24","DOIUrl":"10.1128/mra.00815-24","url":null,"abstract":"<p><p><i>Serratia plymuthica</i> strain SWSY-3.47 is a Gram-negative, rod-shaped bacteria isolated for its high chitinolytic activity. Here, we report the complete genome of this strain comprised of a single circular chromosome of 5,636,345 bp with a G + C content of 56.0%.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142469978","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of marine prosthecate bacterium Fretibacter rubidus type strain JCM 15585. 海洋修复菌 Fretibacter rubidus 型菌株 JCM 15585 的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-11-12 Epub Date: 2024-10-14 DOI: 10.1128/mra.00986-24
Breah LaSarre, Mark L Watson, Emma M Corby, Amelia M Randich
{"title":"Complete genome sequence of marine prosthecate bacterium <i>Fretibacter rubidus</i> type strain JCM 15585.","authors":"Breah LaSarre, Mark L Watson, Emma M Corby, Amelia M Randich","doi":"10.1128/mra.00986-24","DOIUrl":"10.1128/mra.00986-24","url":null,"abstract":"<p><p><i>Fretibacter rubidus</i> is a dimorphic, prosthecate member of the family <i>Maricaulaceae</i>, order Caulobacterales, in the class Alphaproteobacteria. Here, we report the genome of type strain JCM 15585<sup>T</sup> (JC2236<sup>T</sup>), sequenced with Oxford Nanopore Technology.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142469983","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequencing of multidrug-resistant Pseudomonas asiatica strains isolated from dairy cows with clinical mastitis and their farm environment. 从患有临床乳腺炎的奶牛及其牧场环境中分离出的耐多药亚洲假单胞菌菌株的基因组测序草案。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-11-12 Epub Date: 2024-10-15 DOI: 10.1128/mra.00907-24
Taniya Sultana, Naim Siddique, Monira Rahaman, Md Morshedur Rahman, Anm Aminoor Rahman, Anup Kumar Talukder, Ziban Chandra Das, M Nazmul Hoque
{"title":"Draft genome sequencing of multidrug-resistant <i>Pseudomonas asiatica</i> strains isolated from dairy cows with clinical mastitis and their farm environment.","authors":"Taniya Sultana, Naim Siddique, Monira Rahaman, Md Morshedur Rahman, Anm Aminoor Rahman, Anup Kumar Talukder, Ziban Chandra Das, M Nazmul Hoque","doi":"10.1128/mra.00907-24","DOIUrl":"10.1128/mra.00907-24","url":null,"abstract":"<p><p>We report, for the first time, the draft genomes of four multidrug-resistant <i>Pseudomonas asiatica</i> strains isolated from milk (2M1), feces (2F1 and 2F2), and farm soil (2S1) samples of dairy cows with clinical mastitis. The assembled genomes of these strains were 5.7 Mbp, 62.8% G + C content, and 50× genome coverage.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142469998","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-genome sequencing of Mycobacterium tuberculosis sublineage L1.1.1.7 from Chiangrai, Thailand. 泰国清莱结核分枝杆菌 L1.1.1.7 亚系的全基因组测序。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-11-12 Epub Date: 2024-09-23 DOI: 10.1128/mra.00663-24
Kanin Nuttavuthisit, Wuthiwat Ruangchai, Thavin Bodharamik, Waritta Sawaengdee, Surakameth Mahasirimongkol, Prasit Palittapongarnpim
{"title":"Whole-genome sequencing of <i>Mycobacterium tuberculosis</i> sublineage L1.1.1.7 from Chiangrai, Thailand.","authors":"Kanin Nuttavuthisit, Wuthiwat Ruangchai, Thavin Bodharamik, Waritta Sawaengdee, Surakameth Mahasirimongkol, Prasit Palittapongarnpim","doi":"10.1128/mra.00663-24","DOIUrl":"10.1128/mra.00663-24","url":null,"abstract":"<p><p><i>Mycobacterium tuberculosis</i> (MTB) presents a global health issue. Various genotypes of MTB have different geographic distributions. The majority of MTB in Thailand belong to lineages 1 and 2. Here, we report the complete genomic sequences of MTB sublineage L1.1.1.7, which is common in Thailand and infrequently identified in other countries.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142291285","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequence of carbapenem resistant Escherichia coli ST2083 carrying NDM-5, TEM-1, and CMY-42. 携带 NDM-5、TEM-1 和 CMY-42 的耐碳青霉烯类大肠杆菌 ST2083 基因组序列草案。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-11-12 Epub Date: 2024-09-24 DOI: 10.1128/mra.00519-24
Rittwika Banerjee, Ramanakishore V S, Vignesh S, Karthic G, Janani B, Marquess Raj, Kumar Perumal
{"title":"Draft genome sequence of carbapenem resistant <i>Escherichia coli</i> ST2083 carrying NDM-5, TEM-1, and CMY-42.","authors":"Rittwika Banerjee, Ramanakishore V S, Vignesh S, Karthic G, Janani B, Marquess Raj, Kumar Perumal","doi":"10.1128/mra.00519-24","DOIUrl":"10.1128/mra.00519-24","url":null,"abstract":"<p><p>The draft genome sequence of the <i>Escherichia coli</i> strain (CREC-9) of sequence type (ST2083), which was isolated from the urine sample of a 69-year-old male and harbors the antimicrobial resistance genes <i>TEM-1, blaCMY-42,</i> and <i>blaNDM-5</i> encoding resistance to β-lactams, cephalosporins, carbapenems, and fluoroquinolones and coding various virulence factors, is presented here.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142308128","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequences of four representative Corynebacterium belfantii strains. 四个具有代表性的 Corynebacterium belfantii 菌株的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-11-12 Epub Date: 2024-09-30 DOI: 10.1128/mra.00755-24
Yanhui Peng, Heather Fueston, Muhammad Irfan, John Hammond, Diego Morales, Hong Ju, Meghan L Bentz, James Heuser, Mark Burroughs, Maria Lucia Tondella, Michael R Weigand
{"title":"Complete genome sequences of four representative <i>Corynebacterium belfantii</i> strains.","authors":"Yanhui Peng, Heather Fueston, Muhammad Irfan, John Hammond, Diego Morales, Hong Ju, Meghan L Bentz, James Heuser, Mark Burroughs, Maria Lucia Tondella, Michael R Weigand","doi":"10.1128/mra.00755-24","DOIUrl":"10.1128/mra.00755-24","url":null,"abstract":"<p><p>This report describes the complete genome sequence assemblies from four representative isolates of the human pathogen <i>Corynebacterium belfantii</i>. These data provide necessary references to aid accurate sequence-based species discrimination among closely related <i>Corynebacterium</i> spp. pathogens.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142350029","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome sequence of the New Zealand cheese isolate and candidate probiotic strain Lactiplantibacillus plantarum FNZ042. 新西兰奶酪分离菌株和候选益生菌株植物乳杆菌 FNZ042 的基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-11-12 Epub Date: 2024-09-30 DOI: 10.1128/mra.00647-24
Eduardo L de Almeida, Paul W O'Toole, Shalome A Bassett
{"title":"Genome sequence of the New Zealand cheese isolate and candidate probiotic strain <i>Lactiplantibacillus plantarum</i> FNZ042.","authors":"Eduardo L de Almeida, Paul W O'Toole, Shalome A Bassett","doi":"10.1128/mra.00647-24","DOIUrl":"10.1128/mra.00647-24","url":null,"abstract":"<p><p>The complete genome sequence of the candidate probiotic strain <i>Lactiplantibacillus plantarum</i> FNZ042 was determined using a hybrid genome assembly comprising data from Illumina and PacBio sequencing platforms. The genome assembly comprised 3,265,637 bp, including the complete circular chromosome and three circular plasmids.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142350038","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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