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Unveiling the genomic architecture of multidrug-resistant Pseudomonas sp. RTCS2 isolated from spoiled Solanum lycopersicum L. 揭示番茄多药耐药假单胞菌RTCS2的基因组结构。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-06-09 DOI: 10.1128/mra.00337-25
Shubhajit Shaw, Rittick Mondal, Pankaj Mandal, Avijit Mandal, Ritwik Acharya, Dipanjan Das, Sujan Ch Paul, Arka Pratim Chakraborty, Debnirmalya Gangopadhyay, Amit Kumar Mandal
{"title":"Unveiling the genomic architecture of multidrug-resistant <i>Pseudomonas</i> sp. RTCS2 isolated from spoiled <i>Solanum lycopersicum</i> L.","authors":"Shubhajit Shaw, Rittick Mondal, Pankaj Mandal, Avijit Mandal, Ritwik Acharya, Dipanjan Das, Sujan Ch Paul, Arka Pratim Chakraborty, Debnirmalya Gangopadhyay, Amit Kumar Mandal","doi":"10.1128/mra.00337-25","DOIUrl":"https://doi.org/10.1128/mra.00337-25","url":null,"abstract":"<p><p>Here, we report the draft genome of <i>Pseudomonas</i> sp. RTCS2, a gram-negative rod-shaped bacterium associated with tomato spoilage, isolated from Raiganj University, India (25.6071° N; 88.1306° E). The 5,526,005 bp genome with a 62.9% G + C content harbors antimicrobial resistance genes (<i>adeF</i>, <i>vanH</i>, and <i>vanT</i>), highlighting its pathogenic potential.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0033725"},"PeriodicalIF":0.7,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144248724","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequences of two polyvinyl-alcohol-degrading bacteria. 两种聚乙烯醇降解细菌的全基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-06-09 DOI: 10.1128/mra.00350-25
Kohei Nakamura, Furawa Suzuki, Masashi Nambu, Nozomi Kawada, Atsushi Tanikawa, Nobuaki Naganuma
{"title":"Complete genome sequences of two polyvinyl-alcohol-degrading bacteria.","authors":"Kohei Nakamura, Furawa Suzuki, Masashi Nambu, Nozomi Kawada, Atsushi Tanikawa, Nobuaki Naganuma","doi":"10.1128/mra.00350-25","DOIUrl":"https://doi.org/10.1128/mra.00350-25","url":null,"abstract":"<p><p>In this study, we report the complete genome sequences of two polyvinyl alcohol (PVA)-degrading strains: <i>Rhodanobacter</i> sp. DHB23 and <i>Flexivirga endophytica</i> CGMCC 1.15085. Their genome lengths were estimated to be 4,019,238 bp and 4,495,174 bp, respectively.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0035025"},"PeriodicalIF":0.7,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144248689","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome sequence of Microbacterium phage Casino. 微细菌噬菌体卡西诺的基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-06-09 DOI: 10.1128/mra.00018-25
Jennifer H Arca, Gillian A Bradley, Lola M Gantenbein, Landon H Schumaker, Raelynn A Amasol-Tanoura, Avery C Catlin, Saige A Edwards, Sophia F Faria, Maximilliano Fuentes-Ayala, Alexis M Haiges, Hailey E Hart, Ayden K Herrera, Paisley J Karlin, Ian T Rife, Nana Sannomiya, Katie N Thai, Emily J Velasquez, Cori B Williams, Hannah E Moon, Megan L Porter
{"title":"Genome sequence of <i>Microbacterium</i> phage Casino.","authors":"Jennifer H Arca, Gillian A Bradley, Lola M Gantenbein, Landon H Schumaker, Raelynn A Amasol-Tanoura, Avery C Catlin, Saige A Edwards, Sophia F Faria, Maximilliano Fuentes-Ayala, Alexis M Haiges, Hailey E Hart, Ayden K Herrera, Paisley J Karlin, Ian T Rife, Nana Sannomiya, Katie N Thai, Emily J Velasquez, Cori B Williams, Hannah E Moon, Megan L Porter","doi":"10.1128/mra.00018-25","DOIUrl":"https://doi.org/10.1128/mra.00018-25","url":null,"abstract":"<p><p>We present the genome of Casino, a lytic actinobacteriophage assigned to the EM1 subcluster. Casino infects <i>Microbacterium foliorum</i> NRRL B-24224 and was isolated from a soil sample in Storrs, Connecticut. The genome is 53,667 bp in length with 48 annotated genes and a GC content of 64.8%.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0001825"},"PeriodicalIF":0.7,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144248695","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
High-quality draft genome sequences of Acinetobacter pittii strains isolated from soil in Gwagwalada, Nigeria. 尼日利亚瓜瓦拉达土壤中分离的皮蒂不动杆菌高质量基因组序列草图。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-06-09 DOI: 10.1128/mra.00338-25
Ahmed Olowo-Okere, E Skiebe, G Wilharm
{"title":"High-quality draft genome sequences of <i>Acinetobacter pittii</i> strains isolated from soil in Gwagwalada, Nigeria.","authors":"Ahmed Olowo-Okere, E Skiebe, G Wilharm","doi":"10.1128/mra.00338-25","DOIUrl":"https://doi.org/10.1128/mra.00338-25","url":null,"abstract":"<p><p>We report the draft genome sequences of six <i>Acinetobacter pittii</i> strains isolated from soil in Gwagwalada, Nigeria. The genomes range in size from 3.73 to 3.95 Mb, GC contents of 38.84%-38.97%, and high completeness (99.99%-100%). Annotation identified 3,532-3,753 coding genes and multiple AMR determinants.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0033825"},"PeriodicalIF":0.7,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144248697","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rhizosphere and soil metagenomes and metagenome-assembled genomes from the Byers Peninsula, Livingston Island (62°S), Antarctica. 南极利文斯顿岛（62°S）拜尔斯半岛根际和土壤宏基因组及其组装基因组。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-06-09 DOI: 10.1128/mra.00171-25
Valentín Berríos-Farías, Sergio Guajardo-Leiva, Jorge Gallardo-Cerda, Cristóbal Galbán-Malagón, Gabriel Ballesteros, Claudia Egas, Marco Molina-Montenegro, Eduardo Castro-Nallar
{"title":"Rhizosphere and soil metagenomes and metagenome-assembled genomes from the Byers Peninsula, Livingston Island (62°S), Antarctica.","authors":"Valentín Berríos-Farías, Sergio Guajardo-Leiva, Jorge Gallardo-Cerda, Cristóbal Galbán-Malagón, Gabriel Ballesteros, Claudia Egas, Marco Molina-Montenegro, Eduardo Castro-Nallar","doi":"10.1128/mra.00171-25","DOIUrl":"https://doi.org/10.1128/mra.00171-25","url":null,"abstract":"<p><p>Rhizosphere microbes establish functional interactions with their hosts, impacting plant fitness. To further understand plant effects on microbial composition and functional diversity, we present 52 metagenomes and 1,484 metagenome-assembled genomes (MAGs) from soil and the rhizosphere of <i>Colobanthus quitensis</i> and <i>Deschampsia antarctica</i>.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0017125"},"PeriodicalIF":0.7,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144248722","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequence of Pseudomonas aeruginosa strain NGMBE-25A isolated from fecal samples of migratory birds at Jahangirnagar University, Bangladesh. 绘制从孟加拉国Jahangirnagar大学候鸟粪便样本中分离的铜绿假单胞菌菌株NGMBE-25A的基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-06-09 DOI: 10.1128/mra.01160-24
Md Mashiur Rahaman, Sumaiya Akter, Shoheli Asrafie, Zan Zan U, Raiyan Rafsan, Abdus Sadique, Jahidul Alam, Fahad Khan, Nayma Haque Tonny, Rozely Hossain, Mohammad Moshiur Rahman, Abu Noman Zisan, Md Baki Billah, Kabir M Uddin, Md Mahbubur Rahman, Oly Ahmed, Fariza Shams, Ayesha Sharmin, Md Mainul Hossain, Maqsud Hossain
{"title":"Draft genome sequence of <i>Pseudomonas aeruginosa</i> strain NGMBE-25A isolated from fecal samples of migratory birds at Jahangirnagar University, Bangladesh.","authors":"Md Mashiur Rahaman, Sumaiya Akter, Shoheli Asrafie, Zan Zan U, Raiyan Rafsan, Abdus Sadique, Jahidul Alam, Fahad Khan, Nayma Haque Tonny, Rozely Hossain, Mohammad Moshiur Rahman, Abu Noman Zisan, Md Baki Billah, Kabir M Uddin, Md Mahbubur Rahman, Oly Ahmed, Fariza Shams, Ayesha Sharmin, Md Mainul Hossain, Maqsud Hossain","doi":"10.1128/mra.01160-24","DOIUrl":"https://doi.org/10.1128/mra.01160-24","url":null,"abstract":"<p><p>We report the draft genome sequence of <i>Pseudomonas aeruginosa</i> from migratory birds at Jahangirnagar University, Bangladesh. The 6.27 Mb genome, sequenced using Illumina MiSeq, contains 5,719 coding sequences, including antibiotic resistance genes. This report highlights the role of wildlife in the dissemination of bacterial pathogens.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0116024"},"PeriodicalIF":0.7,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144248691","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The complete genome of Vibrio diabolicus isolated from coastal waters and Pacific oysters in England. 从英国沿海水域和太平洋牡蛎中分离出的diabolicus弧菌的全基因组。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-06-09 DOI: 10.1128/mra.01318-24
David Ryder, Megan Adaway, Frederico M Batista, Sariqa Wagley, Andy Powell
{"title":"The complete genome of <i>Vibrio diabolicus</i> isolated from coastal waters and Pacific oysters in England.","authors":"David Ryder, Megan Adaway, Frederico M Batista, Sariqa Wagley, Andy Powell","doi":"10.1128/mra.01318-24","DOIUrl":"https://doi.org/10.1128/mra.01318-24","url":null,"abstract":"<p><p>Water and Pacific Oyster samples were collected from an estuary in Southwest England. Primary identification of bacteria suggested isolates (n = 10) were <i>Vibrio alginolyticus</i>; however, phylogenetic analysis using whole genome sequencing Illumina and Nanopore data showed they were <i>Vibrio diabolicus</i>.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0131824"},"PeriodicalIF":0.7,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144248723","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome of a Pseudomonas sp. KK18 isolated from an Antarctic sediment exhibited genes related to plant growth-promoting potential. 从南极沉积物中分离的假单胞菌KK18全基因组显示了与植物生长促进潜能相关的基因。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-06-09 DOI: 10.1128/mra.00163-25
So-Yeon Eom, Byeollee Kim, So-Ra Han, Sang-Hee Jung, Yuri Kim, Tae-Jin Oh
{"title":"Complete genome of a <i>Pseudomonas</i> sp. KK18 isolated from an Antarctic sediment exhibited genes related to plant growth-promoting potential.","authors":"So-Yeon Eom, Byeollee Kim, So-Ra Han, Sang-Hee Jung, Yuri Kim, Tae-Jin Oh","doi":"10.1128/mra.00163-25","DOIUrl":"https://doi.org/10.1128/mra.00163-25","url":null,"abstract":"<p><p>Here, we report the complete genome sequence of <i>Pseudomonas</i> sp. KK18, isolated from the Antarctic Ross Sea sediment. The isolate has a genome size of 7.3 Mb, 61% GC content, 100% completeness, and 0.36% contamination. The genome harbors genes associated with plant growth promotion and the biosynthesis of secondary metabolites.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0016325"},"PeriodicalIF":0.7,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144248687","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequence of biosurfactant-producing strains Rhodococcus sp. IITD102, Lysinibacillus sp. IITD104 and Paenibacillus sp. IITD108, isolated from oil-contaminated soil. 绘制从石油污染土壤中分离的产生物表面活性剂菌株Rhodococcus sp. IITD102、Lysinibacillus sp. IITD104和Paenibacillus sp. IITD108的基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-06-09 DOI: 10.1128/mra.01329-24
Nidhi Patil, Preeti Srivastava
{"title":"Draft genome sequence of biosurfactant-producing strains <i>Rhodococcus</i> sp. IITD102, <i>Lysinibacillus</i> sp. IITD104 and <i>Paenibacillus</i> sp. IITD108, isolated from oil-contaminated soil.","authors":"Nidhi Patil, Preeti Srivastava","doi":"10.1128/mra.01329-24","DOIUrl":"https://doi.org/10.1128/mra.01329-24","url":null,"abstract":"<p><p>We report the draft genome sequence of three biosurfactant-producing strains <i>Rhodococcus</i> sp. IITD102, <i>Lysinibacillus</i> sp. IITD104 and <i>Paenibacillus</i> sp. IITD108. They produce a glycolipid type of biosurfactant useful in enhanced oil recovery. The nucleotide sequence will provide insights into the various genes and regulators involved in the biosynthesis of biosurfactant.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0132924"},"PeriodicalIF":0.7,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144248694","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Tracking antibiotic resistance in the environment: whole-genome sequencing of seven bacteria from the soil and water. 追踪环境中的抗生素耐药性：来自土壤和水中的七种细菌的全基因组测序。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-06-03 DOI: 10.1128/mra.00098-25
Danae K R Bardaji, Girish Kumar, Kamaria J McFadden, Malik T Jett, Kiyonna N Jones, Malasia Berry, Ceonna Justin, Alexa Pedraza, André O Hudson
{"title":"Tracking antibiotic resistance in the environment: whole-genome sequencing of seven bacteria from the soil and water.","authors":"Danae K R Bardaji, Girish Kumar, Kamaria J McFadden, Malik T Jett, Kiyonna N Jones, Malasia Berry, Ceonna Justin, Alexa Pedraza, André O Hudson","doi":"10.1128/mra.00098-25","DOIUrl":"https://doi.org/10.1128/mra.00098-25","url":null,"abstract":"<p><p>Soil and water samples collected from the Rochester Institute of Technology campus were analyzed for antibiotic-resistant bacteria. Whole-genome sequencing and annotation were conducted on seven isolates that show a diverse range of resistance patterns, underscoring the urgent need for ongoing surveillance of antimicrobial resistance in the environment.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0009825"},"PeriodicalIF":0.7,"publicationDate":"2025-06-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144208970","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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