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Complete genome sequences of nine double recombinant vaccine-derived novel oral poliovirus type 2 genomes from Nigeria 2023-2024. 尼日利亚 2023-2024 年九个双重组疫苗衍生新型口服脊髓灰质炎病毒 2 型基因组的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-29 DOI: 10.1128/mra.00881-24
Christina J Castro, Bamidele Soji Oderinde, Katherine D Poston, Kabir Yusuf Mawashi, Kelley Bullard, Monilade Akinola, Caeden Meade, Hongmei Liu, Fang Hu, James E Bullows, Zachary Gonzalez, Hong Pang, Sarah Sarris, Chadi Agha, Naomi Dybdahl-Sissoko, Daniel B Perry, Larin McDuffie, Elizabeth Henderson, Cara C Burns, Jaume Jorba, Marycelin Baba
{"title":"Complete genome sequences of nine double recombinant vaccine-derived novel oral poliovirus type 2 genomes from Nigeria 2023-2024.","authors":"Christina J Castro, Bamidele Soji Oderinde, Katherine D Poston, Kabir Yusuf Mawashi, Kelley Bullard, Monilade Akinola, Caeden Meade, Hongmei Liu, Fang Hu, James E Bullows, Zachary Gonzalez, Hong Pang, Sarah Sarris, Chadi Agha, Naomi Dybdahl-Sissoko, Daniel B Perry, Larin McDuffie, Elizabeth Henderson, Cara C Burns, Jaume Jorba, Marycelin Baba","doi":"10.1128/mra.00881-24","DOIUrl":"10.1128/mra.00881-24","url":null,"abstract":"<p><p>We report the complete genome sequences of nine double recombinant vaccine-derived novel oral poliovirus type 2 genomes from acute flaccid paralysis (AFP) cases (<i>n</i> = 3), AFP case contacts (<i>n</i> = 4), and environmental surveillance sampling (<i>n</i> = 2) in Nigeria.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142522415","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A near-complete genome of the uncultured Staphylococcus aureus phage COMBAT-CF_PAR1 isolated from the lungs of an infant with cystic fibrosis. 从囊性纤维化婴儿肺部分离出的未培养金黄色葡萄球菌噬菌体 COMBAT-CF_PAR1 的近乎完整的基因组。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-29 DOI: 10.1128/mra.01047-24
Patricia Agudelo-Romero, Jose A Caparros-Martin, Abhinav Sharma, Montserrat Saladié, Peter D Sly, Stephen M Stick, Fergal O Gara
{"title":"A near-complete genome of the uncultured <i>Staphylococcus aureus</i> phage COMBAT-CF_PAR1 isolated from the lungs of an infant with cystic fibrosis.","authors":"Patricia Agudelo-Romero, Jose A Caparros-Martin, Abhinav Sharma, Montserrat Saladié, Peter D Sly, Stephen M Stick, Fergal O Gara","doi":"10.1128/mra.01047-24","DOIUrl":"10.1128/mra.01047-24","url":null,"abstract":"<p><p>In cystic fibrosis, bacteria-bacteriophage interaction in the lower airways is poorly understood. We present the near-complete genome of the uncultured Siphovirus-like bacteriophage, <i>Staphylococcus aureus</i> phage COMBAT-CF_PAR1, isolated from the lower airways. The genome spans 41,510 bp with 33.45% guanine-cytosine content and contains 65 open reading frames.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142524078","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of Bulleidia sp. 10714-15 isolated from human colon cancer patients. 从人类结肠癌患者体内分离出的 Bulleidia sp.
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-29 DOI: 10.1128/mra.00937-24
Haruto Ikeda, Kota Oshibuchi, Jiayue Yang, Shinji Fukuda, Kazuharu Arakawa
{"title":"Complete genome sequence of <i>Bulleidia</i> sp. 10714-15 isolated from human colon cancer patients.","authors":"Haruto Ikeda, Kota Oshibuchi, Jiayue Yang, Shinji Fukuda, Kazuharu Arakawa","doi":"10.1128/mra.00937-24","DOIUrl":"https://doi.org/10.1128/mra.00937-24","url":null,"abstract":"<p><p><i>Bulleidia</i> sp. is a non-spore-forming, obligatory anaerobic, Gram-positive bacterium isolated from the stool samples of human colon cancer patients. We report the complete genome sequence of <i>Bulleidia</i> sp. 10714-15, comprising a single linear chromosome of 2,218,984 bp with a G + C content of 36.6%.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142522409","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of strain KD-1T, the type strain of Sulfurisphaera javensis, isolated from an Indonesian hot spring. 从印度尼西亚温泉中分离出的 Sulfurisphaera javensis 型菌株 KD-1T 的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-29 DOI: 10.1128/mra.00664-24
Hiroyuki D Sakai, Naswandi Nur, Antonius Suwanto, Norio Kurosawa
{"title":"Complete genome sequence of strain KD-1<sup>T</sup>, the type strain of <i>Sulfurisphaera javensis</i>, isolated from an Indonesian hot spring.","authors":"Hiroyuki D Sakai, Naswandi Nur, Antonius Suwanto, Norio Kurosawa","doi":"10.1128/mra.00664-24","DOIUrl":"https://doi.org/10.1128/mra.00664-24","url":null,"abstract":"<p><p><i>Sulfurisphaera javensis</i> KD-1<sup>T</sup>, originally isolated from an Indonesian acidic hot spring, is a hyperthermophilic, acidophilic, and facultatively anaerobic archaeon. Here, we report the 2.6 Mb complete genome sequence of KD-1<sup>T</sup>. Genes related to sulfur metabolism were found in the genome, indicating that KD-1<sup>T</sup> is involved in the sulfur cycle in its habitat.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142522411","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequences of five bacteria isolated from rice plants in a paddy field in Sekinchan, Selangor, Malaysia. 从马来西亚雪兰莪州 Sekinchan 一块稻田的水稻植株中分离出的五种细菌的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-29 DOI: 10.1128/mra.00542-24
Ahmad Zuhairi Abdul Malek, Amalia Mohd Hashim, Nur Fadhilah Khairil Mokhtar, Noor Baity Saidi, Mohd Faizal Abu Bakar, Nallamai Singaram
{"title":"Complete genome sequences of five bacteria isolated from rice plants in a paddy field in Sekinchan, Selangor, Malaysia.","authors":"Ahmad Zuhairi Abdul Malek, Amalia Mohd Hashim, Nur Fadhilah Khairil Mokhtar, Noor Baity Saidi, Mohd Faizal Abu Bakar, Nallamai Singaram","doi":"10.1128/mra.00542-24","DOIUrl":"https://doi.org/10.1128/mra.00542-24","url":null,"abstract":"<p><p>This study examines the genome sequences of five endophytic bacterial isolates from the <i>Oryza sativa</i> microbiome to assess their potential as plant bio-inoculants. The five complete bacterial genomes from the genera <i>Pseudomonas, Burkholderia, Sphingobacterium, Stenotrophomonas,</i> and <i>Pantoea</i> were sequenced using Nanopore long-read sequencing technology.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142522414","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-genome sequence of Bacillus subtilis TR6 strain isolated from tomato (Solanum lycopersicum L.) roots. 从番茄（Solanum lycopersicum L.）根中分离出的枯草芽孢杆菌 TR6 菌株的全基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-29 DOI: 10.1128/mra.00905-24
Vladimir K Chebotar, Maria S Gancheva, Elena P Chizhevskaya, Oksana V Keleinikova, Maria E Baganova, Alexander N Zaplatkin, Veronika N Pishchik
{"title":"Whole-genome sequence of <i>Bacillus subtilis</i> TR6 strain isolated from tomato (<i>Solanum lycopersicum</i> L.) roots.","authors":"Vladimir K Chebotar, Maria S Gancheva, Elena P Chizhevskaya, Oksana V Keleinikova, Maria E Baganova, Alexander N Zaplatkin, Veronika N Pishchik","doi":"10.1128/mra.00905-24","DOIUrl":"https://doi.org/10.1128/mra.00905-24","url":null,"abstract":"<p><p>Here, we announce the sequence of endophyte <i>Bacillus subtilis</i> TR6 strain isolated from tomato roots growing in a greenhouse in St. Petersburg, Russia. With a length of 4,071,622 bp, this strain contained 4,073 potential coding sequences and 10 predicted secondary metabolite biosynthesis gene clusters.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142522422","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of the saprophytic actinomycete Rhodococcus (Prescottella) soli DSD51WT, closely related to the multi-host pathogen Rhodococcus (Prescottella) equi. 与多宿主病原体 Prescottella (Rhodococcus) equi 密切相关的溶菌性放线菌 Prescottella soli DSD51WT 的完整基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-29 DOI: 10.1128/mra.00597-24
Zeynep Yerlikaya, Raúl Miranda-CasoLuengo, Peadar Ó Gaora, Wim G Meijer
{"title":"Complete genome sequence of the saprophytic actinomycete <i>Rhodococcus (Prescottella) soli</i> DSD51W<sup>T</sup>, closely related to the multi-host pathogen <i>Rhodococcus (Prescottella) equi</i>.","authors":"Zeynep Yerlikaya, Raúl Miranda-CasoLuengo, Peadar Ó Gaora, Wim G Meijer","doi":"10.1128/mra.00597-24","DOIUrl":"10.1128/mra.00597-24","url":null,"abstract":"<p><p><i>Rhodococcus (Prescottella) soli</i> strain DSD51W<sup>T</sup> is an aerobic, non-spore-forming, non-motile actinomycete isolated previously from soil collected from Kyoto Park, Japan, using a resuscitative technique. Here, we report the complete, circular genome sequence of <i>R. soli</i> DSD51W<sup>T</sup>. We employed a hybrid approach using Illumina and Oxford Nanopore platforms.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142522412","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome sequence of the marine alphaproteobacterium Lentilitoribacter sp. EG35 isolated from the temperate octocoral Eunicella gazella. 从温带章鱼Eunicella gazella中分离出的海洋阿尔法蛋白杆菌Lentilitoribacter sp.
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-24 DOI: 10.1128/mra.00872-24
Tina Keller-Costa, Selene Madureira, Ana S Fernandes, Lydia Kozma, Jorge M S Gonçalves, Cristina Barroso, Conceição Egas, Rodrigo Costa
{"title":"Genome sequence of the marine alphaproteobacterium <i>Lentilitoribacter</i> sp. EG35 isolated from the temperate octocoral <i>Eunicella gazella</i>.","authors":"Tina Keller-Costa, Selene Madureira, Ana S Fernandes, Lydia Kozma, Jorge M S Gonçalves, Cristina Barroso, Conceição Egas, Rodrigo Costa","doi":"10.1128/mra.00872-24","DOIUrl":"https://doi.org/10.1128/mra.00872-24","url":null,"abstract":"<p><p>We report the genome sequence of <i>Lentilitoribacter</i> sp. strain EG35 isolated from the octocoral <i>Eunicella gazella</i> sampled off the coast of Portugal. We reveal the coding potential for the biosynthesis of polyhydroxyalkanoates - biodegradable polyesters that may serve bioplastics production, diverse homoserine lactone-like communication signals, and four putatively novel natural products.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142504035","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-genome sequence of Bacillus paralicheniformis strain R243 isolated from rice (Oryza sativa L.) roots. 从水稻（Oryza sativa L.）根中分离出的 Paralicheniformis Bacillus 菌株 R243 的全基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-24 DOI: 10.1128/mra.00879-24
Vladimir K Chebotar, Maria S Gancheva, Oksana V Keleinikova, Maria E Baganova, Alexander N Zaplatkin, Veronika N Pishchik, Elena P Chizhevskaya
{"title":"Whole-genome sequence of <i>Bacillus paralicheniformis</i> strain R243 isolated from rice (<i>Oryza sativa</i> L.) roots.","authors":"Vladimir K Chebotar, Maria S Gancheva, Oksana V Keleinikova, Maria E Baganova, Alexander N Zaplatkin, Veronika N Pishchik, Elena P Chizhevskaya","doi":"10.1128/mra.00879-24","DOIUrl":"https://doi.org/10.1128/mra.00879-24","url":null,"abstract":"<p><p>We isolated an endophytic strain R243 and sequenced its genome using the NextSeq 1000 (Illumina) sequencing platform. The sequenced genome contains 4,478 protein-coding genes with a mean GC content of 45.56%. The strain R243 was identified as <i>Bacillus paralicheniformis</i>. Gene clusters involved in the synthesis of biocontrol substances were identified.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142504036","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The draft genome sequence of a carbapenem-resistant Klebsiella pneumoniae strain belonging to sequence type 11 and capsular type 62. 耐碳青霉烯类药物的肺炎克雷伯氏菌菌株的基因组序列草案，该菌株属于序列类型 11 和胶囊类型 62。
IF 0.7
Microbiology Resource Announcements Pub Date : 2024-10-22 DOI: 10.1128/mra.00981-24
Linwan Zhang, Yu Feng, Yongqiang Yang, Yanling He, Zhiyong Zong
{"title":"The draft genome sequence of a carbapenem-resistant <i>Klebsiella pneumoniae</i> strain belonging to sequence type 11 and capsular type 62.","authors":"Linwan Zhang, Yu Feng, Yongqiang Yang, Yanling He, Zhiyong Zong","doi":"10.1128/mra.00981-24","DOIUrl":"10.1128/mra.00981-24","url":null,"abstract":"<p><p>Carbapenem-resistant <i>Klebsiella pneumoniae</i> (CRKP) of sequence type 11 (ST11) and capsular type KL47 or KL64 are dominant in China. We report the draft genome sequence of an ST11 <i>bla</i><sub>KPC-2</sub>-carrying CRKP strain belonging to uncommon capsular type KL62. This strain carries virulence factors encoding multiple iron acquisition systems and mucoid regulators.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142470007","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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