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Novel assembly of the SF370 strain of the important human pathogen Streptococcus pyogenes serotype M1. 人类重要病原体M1型化脓性链球菌SF370株的新组装。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-01-16 Epub Date: 2024-12-12 DOI: 10.1128/mra.01197-24
Thomas Fabian Wulff, Rina Ahmed-Begrich, Karin Hahnke, Michael Jahn, Emmanuelle Charpentier
{"title":"Novel assembly of the SF370 strain of the important human pathogen <i>Streptococcus pyogenes</i> serotype M1.","authors":"Thomas Fabian Wulff, Rina Ahmed-Begrich, Karin Hahnke, Michael Jahn, Emmanuelle Charpentier","doi":"10.1128/mra.01197-24","DOIUrl":"10.1128/mra.01197-24","url":null,"abstract":"<p><p>The important human pathogen <i>Streptococcus pyogenes</i> causes a wide range of diseases. Strain SF370 was the first fully sequenced strain of <i>S. pyogenes</i>, providing essential insights into the molecular mechanisms of disease. We present an improved genome assembly of strain SF370 from ATCC, which corrects long-standing errors in its genome.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0119724"},"PeriodicalIF":0.7,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11737162/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142813880","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genomes of common bacterial hosts of RNA bacteriophage Φ6. RNA噬菌体常见细菌宿主的完整基因组Φ6。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-01-16 Epub Date: 2024-12-10 DOI: 10.1128/mra.01000-24
Taylor Andrews, Siobain Duffy
{"title":"Complete genomes of common bacterial hosts of RNA bacteriophage Φ6.","authors":"Taylor Andrews, Siobain Duffy","doi":"10.1128/mra.01000-24","DOIUrl":"10.1128/mra.01000-24","url":null,"abstract":"<p><p>Bacterial plant pathogens <i>Pseudomonas savastanoi</i> pv. <i>phaseolicola</i>, <i>P. syringae</i> pv. <i>tomato</i>, <i>P. syringae</i> pv. <i>atrofaciens</i>, and <i>P. oleovorans</i> East River isolate A serve as common laboratory hosts for bacteriophage Φ6, a widely used model organism for enveloped viruses. Here, we report complete genome sequences for strains of these bacterial hosts.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0100024"},"PeriodicalIF":0.7,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11737137/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142801589","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Draft genome sequences of two distinct Clostridioides difficile isolates coinfecting a patient. 绘制同时感染一个病人的两种不同艰难梭菌分离株的基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-01-16 Epub Date: 2024-12-10 DOI: 10.1128/mra.01017-24
Xin Lu, Yu Feng, Xiaohui Wang
{"title":"Draft genome sequences of two distinct <i>Clostridioides difficile</i> isolates coinfecting a patient.","authors":"Xin Lu, Yu Feng, Xiaohui Wang","doi":"10.1128/mra.01017-24","DOIUrl":"10.1128/mra.01017-24","url":null,"abstract":"<p><p><i>Clostridioides difficile</i> is a spore-forming anaerobic Gram-positive bacillus. In this study, two distinct strains of <i>C. difficile</i> causing coinfection were isolated from the same fecal sample. Whole-genome sequencing was performed on these two strains to elucidate their genomic characteristics.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0101724"},"PeriodicalIF":0.7,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11737177/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142801637","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of bacteriophage Godfather isolated from Microbacterium foliorum. 叶状微杆菌噬菌体教父的全基因组序列分析。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-01-16 DOI: 10.1128/mra.00888-24
Joshua Hutchings, Lauren Bower, Ethan Collum, Timothy Hester, Melody Hunter, Chaney Kelly, Luke Reynolds, Cole Moore, Dustin Edwards
{"title":"Complete genome sequence of bacteriophage Godfather isolated from <i>Microbacterium foliorum</i>.","authors":"Joshua Hutchings, Lauren Bower, Ethan Collum, Timothy Hester, Melody Hunter, Chaney Kelly, Luke Reynolds, Cole Moore, Dustin Edwards","doi":"10.1128/mra.00888-24","DOIUrl":"https://doi.org/10.1128/mra.00888-24","url":null,"abstract":"<p><p>Microbacteriophage Godfather was collected from a soil sample in Stephenville, Texas. The 17,452-bp double-stranded genome contains 24 protein-coding genes. The genome shares >99% nucleotide sequence identity with cluster EE microbacteriophages Scamander, Danno, Kojax4, and Burgy.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0088824"},"PeriodicalIF":0.7,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143008511","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Permanent draft genome sequences of cadmium-resistant isolates of Cupriavidus from soils within the Tar Creek Superfund site. 从 Tar Creek 超级基金场地土壤中分离出的抗镉铜绿微囊藻永久基因组序列草案。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-01-16 Epub Date: 2024-11-26 DOI: 10.1128/mra.00818-24
Jordon N Winn, Emily A Wedlock, Emily P McHugh, David Monismith, James H Campbell, Alisha G Campbell
{"title":"Permanent draft genome sequences of cadmium-resistant isolates of <i>Cupriavidus</i> from soils within the Tar Creek Superfund site.","authors":"Jordon N Winn, Emily A Wedlock, Emily P McHugh, David Monismith, James H Campbell, Alisha G Campbell","doi":"10.1128/mra.00818-24","DOIUrl":"10.1128/mra.00818-24","url":null,"abstract":"<p><p>Soil samples taken near the abandoned town of Picher, OK, USA, were used to enrich and isolate bacteria in the presence of cadmium. Isolates reported belong to the genus <i>Cupriavidus</i>. Here, we report their permanent draft sequences with an emphasis on genes conferring resistance to cadmium.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0081824"},"PeriodicalIF":0.7,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11737155/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142716500","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-genome sequencing of three extremophile Bacillus sp. strains isolated from the Atacama Desert. 对分离自阿塔卡马沙漠的三株嗜极芽孢杆菌进行全基因组测序。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-01-16 Epub Date: 2024-12-16 DOI: 10.1128/mra.00679-24
Nicole T Cavanaugh, Girish Kumar, Matteo Couto Frignani, Nathan Thewedros, Marcello Twahirwa, Carlos Riquelme, André O Hudson, Yunrong Chai, Veronica Godoy-Carter
{"title":"Whole-genome sequencing of three extremophile <i>Bacillus</i> sp. strains isolated from the Atacama Desert.","authors":"Nicole T Cavanaugh, Girish Kumar, Matteo Couto Frignani, Nathan Thewedros, Marcello Twahirwa, Carlos Riquelme, André O Hudson, Yunrong Chai, Veronica Godoy-Carter","doi":"10.1128/mra.00679-24","DOIUrl":"10.1128/mra.00679-24","url":null,"abstract":"<p><p>The Atacama Desert is home to bacteria that use biofilms as a means of protecting themselves against the harsh environment. To inform research regarding this survival mechanism, we cultured and sequenced the genomes of three <i>Bacillus</i> sp. isolates from Atacama Desert soil.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0067924"},"PeriodicalIF":0.7,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11737040/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142829359","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genomes of novel Serratia strains from suburban soil. 郊区土壤中新型沙雷菌菌株的基因组分析。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-01-16 Epub Date: 2024-12-04 DOI: 10.1128/mra.00866-24
E X Markert, Landon Severe, Kaeson Severe, Katrina I Twing, L M Ward
{"title":"Genomes of novel <i>Serratia</i> strains from suburban soil.","authors":"E X Markert, Landon Severe, Kaeson Severe, Katrina I Twing, L M Ward","doi":"10.1128/mra.00866-24","DOIUrl":"10.1128/mra.00866-24","url":null,"abstract":"<p><p>Here, we present genomes of three strains of <i>Serratia</i> initially isolated from suburban soil-one strain of <i>S. ureilytica</i> and two strains of <i>S. quinivorans</i>-resistant to multiple classes of antibiotics. This expands the genomic sampling of a group relevant to the ecosystem and human health.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0086624"},"PeriodicalIF":0.7,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11737036/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142770611","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Near full-length genome sequence of a vesicular stomatitis New Jersey virus isolate collected from a naturally infected cow in the endemic state of Chiapas, Mexico. 从墨西哥恰帕斯州流行的自然感染奶牛身上采集的新泽西州水泡性口炎病毒分离物的近全长基因组序列。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-01-16 Epub Date: 2024-12-13 DOI: 10.1128/mra.01007-24
Federico Valdez, Lauro Velazquez-Salinas, Lawrence H Zhou, George R Smoliga, Ian Fish, Roberto Navarro-Lopez, Irene Lopez-Gonzalez, Kathryn A Hanley, Chad E Mire, Luis L Rodriguez, Jonathan Arzt
{"title":"Near full-length genome sequence of a vesicular stomatitis New Jersey virus isolate collected from a naturally infected cow in the endemic state of Chiapas, Mexico.","authors":"Federico Valdez, Lauro Velazquez-Salinas, Lawrence H Zhou, George R Smoliga, Ian Fish, Roberto Navarro-Lopez, Irene Lopez-Gonzalez, Kathryn A Hanley, Chad E Mire, Luis L Rodriguez, Jonathan Arzt","doi":"10.1128/mra.01007-24","DOIUrl":"10.1128/mra.01007-24","url":null,"abstract":"<p><p>Here, we report the near full-length genome sequence of a <i>Vesiculovirus newjersey</i> isolate obtained from a naturally infected cow (<i>Bos taurus</i>) in the state of Chiapas, Mexico. This sequence will support future efforts to improve our understanding of the evolutionary dynamics of this pathogen in endemic regions of Mexico.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0100724"},"PeriodicalIF":0.7,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11737132/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142818712","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterization of the microbial communities in paddy soils in Lajas, Puerto Rico using 16S rRNA gene. 波多黎各Lajas水稻土微生物群落的16S rRNA基因分析
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-01-16 Epub Date: 2024-12-10 DOI: 10.1128/mra.01008-24
Edwin Omar Rivera-Lopez, Javier Huertas-Miranda, Carlos Rios-Velazquez
{"title":"Characterization of the microbial communities in paddy soils in Lajas, Puerto Rico using 16S rRNA gene.","authors":"Edwin Omar Rivera-Lopez, Javier Huertas-Miranda, Carlos Rios-Velazquez","doi":"10.1128/mra.01008-24","DOIUrl":"10.1128/mra.01008-24","url":null,"abstract":"<p><p>The microbiota in the paddy soils of the Lajas Agricultural Experimental Station at the University of Puerto Rico (LAES-UPR) plays a crucial role in agricultural ecosystems. Despite being at an experimental station, these soils represent natural environments supporting rice cultivation. Microbial diversity was evaluated during pre-harvest and post-harvest periods.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0100824"},"PeriodicalIF":0.7,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11737171/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142801526","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-genome sequence of non-rhizobial strain Tardiphaga sp. 709 isolated from the root nodule of Astragalus inopinatus Borris., growing on the Kamchatka Peninsula. 黄芪根瘤非根瘤菌Tardiphaga sp. 709的全基因组序列研究。生长在堪察加半岛。
IF 0.7
Microbiology Resource Announcements Pub Date : 2025-01-16 Epub Date: 2024-12-17 DOI: 10.1128/mra.00923-24
Polina Guro, Irina Kuznetsova, Anna Sazanova, Andrey Belimov, Vera Safronova
{"title":"Whole-genome sequence of non-rhizobial strain <i>Tardiphaga</i> sp. 709 isolated from the root nodule of <i>Astragalus inopinatus</i> Borris., growing on the Kamchatka Peninsula.","authors":"Polina Guro, Irina Kuznetsova, Anna Sazanova, Andrey Belimov, Vera Safronova","doi":"10.1128/mra.00923-24","DOIUrl":"10.1128/mra.00923-24","url":null,"abstract":"<p><p>We report the whole-genome sequence of the non-rhizobial endosymbiotic bacteria <i>Tardiphaga</i> sp. strain 709, which was isolated from the root nodule of <i>Astragalus inopinatus</i> Borris. on the Kamchatka Peninsula, Russia. The genome consists of one chromosome and one plasmid with a total length of 6,359,564 bp and 61.5% of GC content.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0092324"},"PeriodicalIF":0.7,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11737185/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142837787","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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