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Contrasting morphology and growth habits of Frutexites in Late Devonian reef complexes of the Canning Basin, northwestern Australia 澳大利亚西北部坎宁盆地晚泥盆世礁复合体中果粒虫的形态和生长习性对比。
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-11-20 DOI: 10.1111/gbi.12579
France Champenois, Annette D. George, Kenneth J. McNamara, Jeremy Shaw, Maria Cherdantseva
{"title":"Contrasting morphology and growth habits of Frutexites in Late Devonian reef complexes of the Canning Basin, northwestern Australia","authors":"France Champenois,&nbsp;Annette D. George,&nbsp;Kenneth J. McNamara,&nbsp;Jeremy Shaw,&nbsp;Maria Cherdantseva","doi":"10.1111/gbi.12579","DOIUrl":"10.1111/gbi.12579","url":null,"abstract":"<p><i>Frutexites</i>-like microstructures are described from the exhumed Late Devonian reef complexes of the northern Canning Basin, Western Australia. Several high-resolution imaging techniques, including X-ray microcomputerised tomography, scanning electron microscopy and X-ray fluorescence microscopy, were used to investigate morphology and composition in two samples. Three types of <i>Frutexites</i>-like microstructures (Types I–III) have been identified. Type I, found lining an early marine cement-filled cavity in fore-reef grainstone facies, consists of dendritic structures formed primarily of coccoid bacteria with filamentous bacteria embedded in sheets of amorphous extracellular polymeric substances (EPS). These ferromanganiferous dendrites have laminated to spheroidal textures. Types II and III are from a toe-of-slope hardground. Type II grew in a crypt between two corals, is also dendritic and composed of bacilliform and filamentous bacteria embedded in an amorphous EPS sheet. The opaqueness of these ferriferous dendrites precludes more detailed description of textures. Type III grew as branching columnar microstromatolites and is composed of entwined filaments of <i>Girvanella</i>, <i>Rothpletzella</i> and <i>Wetheredella</i> with Fe-enriched outer walls that generate <i>Frutexites</i>-like microstructures. Types I and II resemble <i>Frutexites</i> sensu stricto as defined by Maslov (<i>Stromatolites</i>, Trudy Instituta geologicheskikh nauk Akademiya nauk SSR, 1960) and are the result of the consecutive growth and permineralisation of biofilms composed of mixed bacterial communities growing in cryptic habitats. Type III superficially resembles <i>Frutexites</i> sensu stricto based on macroscopic field observations, however, detailed microscopic analysis reveals that it is composed of Fe-enriched tubular walls surrounded by Mn-enriched calcite.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"22 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2023-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/gbi.12579","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138174984","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Featured Cover 特色封面
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-10-15 DOI: 10.1111/gbi.12578
{"title":"Featured Cover","authors":"","doi":"10.1111/gbi.12578","DOIUrl":"https://doi.org/10.1111/gbi.12578","url":null,"abstract":"<p>Cover</p><p>The cover image is based on the Research Article <i>White and green rust chimneys accumulate RNA in a ferruginous chemical garden</i> by Vanessa Helmbrecht et al., https://doi.org/10.1111/gbi.12572\u0000 \u0000 <figure>\u0000 <div><picture>\u0000 <source></source></picture><p></p>\u0000 </div>\u0000 </figure>\u0000 </p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 6","pages":"i"},"PeriodicalIF":3.7,"publicationDate":"2023-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/gbi.12578","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41229871","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Distinctive microfossil supports early Paleoproterozoic rise in complex cellular organisation 独特的微体化石支持古元古代早期复杂细胞组织的兴起。
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-10-06 DOI: 10.1111/gbi.12576
Erica V. Barlow, Christopher H. House, Ming-Chang Liu, Maxwell T. Wetherington, Martin J. Van Kranendonk
{"title":"Distinctive microfossil supports early Paleoproterozoic rise in complex cellular organisation","authors":"Erica V. Barlow,&nbsp;Christopher H. House,&nbsp;Ming-Chang Liu,&nbsp;Maxwell T. Wetherington,&nbsp;Martin J. Van Kranendonk","doi":"10.1111/gbi.12576","DOIUrl":"10.1111/gbi.12576","url":null,"abstract":"<p>The great oxidation event (GOE), ~2.4 billion years ago, caused fundamental changes to the chemistry of Earth's surface environments. However, the effect of these changes on the biosphere is unknown, due to a worldwide lack of well-preserved fossils from this time. Here, we investigate exceptionally preserved, large spherical aggregate (SA) microfossils permineralised in chert from the c. 2.4 Ga Turee Creek Group in Western Australia. Field and petrographic observations, Raman spectroscopic mapping, and in situ carbon isotopic analyses uncover insights into the morphology, habitat, reproduction and metabolism of this unusual form, whose distinctive, SA morphology has no known counterpart in the fossil record. Comparative analysis with microfossils from before the GOE reveals the large SA microfossils represent a step-up in cellular organisation. Morphological comparison to extant micro-organisms indicates the SAs have more in common with coenobial algae than coccoidal bacteria, emphasising the complexity of this microfossil form. The remarkable preservation here provides a unique window into the biosphere, revealing an increase in the complexity of life coinciding with the GOE.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"22 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2023-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/gbi.12576","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41093755","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Divergence time estimates for the hypoxia-inducible factor-1 alpha (HIF1α) reveal an ancient emergence of animals in low-oxygen environments 缺氧诱导因子-1α(HIF1α)的分化时间估计揭示了低氧环境中动物的古老出现。
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-09-26 DOI: 10.1111/gbi.12577
Flavia A. Belato, Beatriz Mello, Christopher J. Coates, Kenneth M. Halanych, Federico D. Brown, André C. Morandini, Juliana de Moraes Leme, Ricardo I. F. Trindade, Elisa Maria Costa-Paiva
{"title":"Divergence time estimates for the hypoxia-inducible factor-1 alpha (HIF1α) reveal an ancient emergence of animals in low-oxygen environments","authors":"Flavia A. Belato,&nbsp;Beatriz Mello,&nbsp;Christopher J. Coates,&nbsp;Kenneth M. Halanych,&nbsp;Federico D. Brown,&nbsp;André C. Morandini,&nbsp;Juliana de Moraes Leme,&nbsp;Ricardo I. F. Trindade,&nbsp;Elisa Maria Costa-Paiva","doi":"10.1111/gbi.12577","DOIUrl":"10.1111/gbi.12577","url":null,"abstract":"<p>Unveiling the tempo and mode of animal evolution is necessary to understand the links between environmental changes and biological innovation. Although the earliest unambiguous metazoan fossils date to the late Ediacaran period, molecular clock estimates agree that the last common ancestor (LCA) of all extant animals emerged ~850 Ma, in the Tonian period, before the oldest evidence for widespread ocean oxygenation at ~635–560 Ma in the Ediacaran period. Metazoans are aerobic organisms, that is, they are dependent on oxygen to survive. In low-oxygen conditions, most animals have an evolutionarily conserved pathway for maintaining oxygen homeostasis that triggers physiological changes in gene expression via the hypoxia-inducible factor (HIFa). However, here we confirm the absence of the characteristic HIFa protein domain responsible for the oxygen sensing of HIFa in sponges and ctenophores, indicating the LCA of metazoans lacked the functional protein domain as well, and so could have maintained their transcription levels unaltered under the very low-oxygen concentrations of their environments. Using Bayesian relaxed molecular clock dating, we inferred that the ancestral gene lineage responsible for HIFa arose in the Mesoproterozoic Era, ~1273 Ma (Credibility Interval 957–1621 Ma), consistent with the idea that important genetic machinery associated with animals evolved much earlier than the LCA of animals. Our data suggest at least two duplication events in the evolutionary history of HIFa, which generated three vertebrate paralogs, products of the two successive whole-genome duplications that occurred in the vertebrate LCA. Overall, our results support the hypothesis of a pre-Tonian emergence of metazoans under low-oxygen conditions, and an increase in oxygen response elements during animal evolution.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"22 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2023-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41100438","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The role of clay minerals in the preservation of Precambrian organic-walled microfossils 粘土矿物在保存前寒武纪有机壁微体化石中的作用。
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-09-19 DOI: 10.1111/gbi.12573
C. R. Woltz, R. P. Anderson, N. J. Tosca, S. M. Porter
{"title":"The role of clay minerals in the preservation of Precambrian organic-walled microfossils","authors":"C. R. Woltz,&nbsp;R. P. Anderson,&nbsp;N. J. Tosca,&nbsp;S. M. Porter","doi":"10.1111/gbi.12573","DOIUrl":"10.1111/gbi.12573","url":null,"abstract":"<p>Precambrian organic-walled microfossils (OWMs) are primarily preserved in mudstones and shales that are low in total organic carbon (TOC). Recent work suggests that high TOC may hinder OWM preservation, perhaps because it interferes with chemical interactions involving certain clay minerals that inhibit the decay of microorganisms. To test if clay mineralogy controls OWM preservation, and if TOC moderates the effect of clay minerals, we compared OWM preservational quality (measured by pitting on fossil surfaces and the deterioration of wall margins) to TOC, total clay, and specific clay mineral concentrations in 78 shale samples from 11 lithologic units ranging in age from ca. 1650 to 650 million years ago. We found that the probability of finding well-preserved microfossils positively correlates with total clay concentrations and confirmed that it negatively correlates with TOC concentrations. However, we found no evidence that TOC influences the effect of clay mineral concentrations on OWM preservation, supporting an independent role of both factors on preservation. Within the total clay fraction, well-preserved microfossils are more likely to occur in shales with high illite concentrations and low berthierine/chamosite concentrations; however, the magnitude of their effect on preservation is small. Therefore, there is little evidence that bulk clay chemistry is important in OWM preservation. Instead, we propose that OWM preservation is largely regulated by physical properties that isolate organic remains from microbial degradation such as food scarcity (low TOC) and low sediment permeability (high total clay content): low TOC increases the diffusive distances between potential carbon sources and heterotrophic microbes (or their degradative enzymes), while high clay concentrations reduce sediment pore space, thereby limiting the diffusion of oxidants and degradative enzymes to the sites of decay.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 6","pages":"708-724"},"PeriodicalIF":3.7,"publicationDate":"2023-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/gbi.12573","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41093756","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Sulfur disproportionating microbial communities in a dynamic, microoxic-sulfidic karst system 动态微毒硫化物岩溶系统中硫歧化微生物群落
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-09-18 DOI: 10.1111/gbi.12574
Heidi S. Aronson, Christian E. Clark, Douglas E. LaRowe, Jan P. Amend, Lubos Polerecky, Jennifer L. Macalady
{"title":"Sulfur disproportionating microbial communities in a dynamic, microoxic-sulfidic karst system","authors":"Heidi S. Aronson,&nbsp;Christian E. Clark,&nbsp;Douglas E. LaRowe,&nbsp;Jan P. Amend,&nbsp;Lubos Polerecky,&nbsp;Jennifer L. Macalady","doi":"10.1111/gbi.12574","DOIUrl":"10.1111/gbi.12574","url":null,"abstract":"<p>Biogeochemical sulfur cycling in sulfidic karst systems is largely driven by abiotic and biological sulfide oxidation, but the fate of elemental sulfur (S<sup>0</sup>) that accumulates in these systems is not well understood. The Frasassi Cave system (Italy) is intersected by a sulfidic aquifer that mixes with small quantities of oxygen-rich meteoric water, creating Proterozoic-like conditions and supporting a prolific ecosystem driven by sulfur-based chemolithoautotrophy. To better understand the cycling of S<sup>0</sup> in this environment, we examined the geochemistry and microbiology of sediments underlying widespread sulfide-oxidizing mats dominated by <i>Beggiatoa</i>. Sediment populations were dominated by uncultivated relatives of sulfur cycling chemolithoautotrophs related to <i>Sulfurovum</i>, <i>Halothiobacillus</i>, <i>Thiofaba</i>, <i>Thiovirga</i>, <i>Thiobacillus</i>, and <i>Desulfocapsa</i>, as well as diverse uncultivated anaerobic heterotrophs affiliated with <i>Bacteroidota</i>, Anaerolineaceae, Lentimicrobiaceae, and Prolixibacteraceae. <i>Desulfocapsa</i> and <i>Sulfurovum</i> populations accounted for 12%–26% of sediment 16S rRNA amplicon sequences and were closely related to isolates which carry out autotrophic S<sup>0</sup> disproportionation in pure culture. Gibbs energy (∆<i>G</i><sub><i>r</i></sub>) calculations revealed that S<sup>0</sup> disproportionation under in situ conditions is energy yielding. Microsensor profiles through the mat-sediment interface showed that <i>Beggiatoa</i> mats consume dissolved sulfide and oxygen, but a net increase in acidity was only observed in the sediments below. Together, these findings suggest that disproportionation is an important sink for S<sup>0</sup> generated by microbial sulfide oxidation in this oxygen-limited system and may contribute to the weathering of carbonate rocks and sediments in sulfur-rich environments.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 6","pages":"791-803"},"PeriodicalIF":3.7,"publicationDate":"2023-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/gbi.12574","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10287098","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Microbial diversity and authigenic siderite mediation in sediments surrounding the Kedr-1 mud volcano, Lake Baikal 贝加尔湖Kedr-1泥火山周围沉积物中的微生物多样性和自生菱铁矿介导作用
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-09-12 DOI: 10.1111/gbi.12575
Anna V. Lomakina, Sergei V. Bukin, Tatyana V. Pogodaeva, Alexandra V. Turchyn, Oleg M. Khlystov, Andrey V. Khabuev, Vyacheslav G. Ivanov, Aleksey A. Krylov, Tamara I. Zemskaya
{"title":"Microbial diversity and authigenic siderite mediation in sediments surrounding the Kedr-1 mud volcano, Lake Baikal","authors":"Anna V. Lomakina,&nbsp;Sergei V. Bukin,&nbsp;Tatyana V. Pogodaeva,&nbsp;Alexandra V. Turchyn,&nbsp;Oleg M. Khlystov,&nbsp;Andrey V. Khabuev,&nbsp;Vyacheslav G. Ivanov,&nbsp;Aleksey A. Krylov,&nbsp;Tamara I. Zemskaya","doi":"10.1111/gbi.12575","DOIUrl":"10.1111/gbi.12575","url":null,"abstract":"<p>The gas hydrate-bearing structure—mud volcano Kedr-1 (Lake Baikal, southern basin)—is located near the coal-bearing sediments of the Tankhoy formation of Oligocene–Miocene age and can be an ideal source of gas-saturated fluid. A significant amount of siderite minerals (FeCO<sub>3</sub>) were collected from sediments at depths ranging from 0.5 to 327 cm below the lake floor (cmblf). An important feature of these carbonate minerals is the extremely strong enrichment in the heavy <sup><i>13</i></sup><i>C</i> isotope, reaching values of +33.3‰ VPDB. The <i>δ</i><sup><i>13</i></sup><i>C</i> of the siderite minerals, as well as their morphology and elemental composition, and the <i>δ</i><sup><i>13</i></sup><i>C</i><sub><i>DIC</i></sub> of the co-existing pore water, differed across layers of the core, which implies at least two generations of siderite formation. Here, we leverage mineralogical and geochemical data with 16S rRNA data from the microbial communities in sediments surrounding layers containing siderite minerals. Statistical data reveal the formation of three clusters of microbial communities based on taxonomical composition, key taxa among bacteria and archaea, and environmental parameters. Diversity and richness estimators decrease with sediment depth, with several similar prevailing clades located at the bottom of the core. Most of the taxa in the deep sediments could be associated with putative metabolisms involving organotrophic fermentation (Bathyarchaeia, Caldatribacteriota, and Chloroflexota). Various groups of methanogens (<i>Methanoregulaceae</i>, <i>Methanosaetaceae</i>, and <i>Methanomassiliicoccales</i>) and methanotrophic (<i>Methanoperedenaceae</i>) archaea are present in the sediment at variable relative abundances throughout the sampled depth. Based on the physicochemical characteristics of the sediment, carbon isotope analysis of carbonate minerals and DIC, and phylogenetic analysis of individual taxa and their metabolic potential, we present several models for subsurface siderite precipitation in Lake Baikal sediments.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 6","pages":"770-790"},"PeriodicalIF":3.7,"publicationDate":"2023-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10214427","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evolution of iron and oxygen biogeochemical cycles during the Precambrian 前寒武纪铁和氧生物地球化学循环的演化
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-08-25 DOI: 10.1111/gbi.12571
Yasuto Watanabe, Eiichi Tajika, Kazumi Ozaki
{"title":"Evolution of iron and oxygen biogeochemical cycles during the Precambrian","authors":"Yasuto Watanabe,&nbsp;Eiichi Tajika,&nbsp;Kazumi Ozaki","doi":"10.1111/gbi.12571","DOIUrl":"10.1111/gbi.12571","url":null,"abstract":"<p>Iron (Fe) is an essential element for life, and its geochemical cycle is intimately linked to the coupled history of life and Earth's environment. The accumulated geologic records indicate that ferruginous waters existed in the Precambrian oceans not only before the first major rise of atmospheric O<sub>2</sub> levels (Great Oxidation Event; GOE) during the Paleoproterozoic, but also during the rest of the Proterozoic. However, the interactive evolution of the biogeochemical cycles of O<sub>2</sub> and Fe during the Archean–Proterozoic remains ambiguous. Here, we develop a biogeochemical model to investigate the coupled biogeochemical evolution of Fe–O<sub>2</sub>–P–C cycles across the GOE. Our model demonstrates that the marine Fe cycle was less sensitive to changes in the production rate of O<sub>2</sub> before the GOE (atmospheric <i>p</i>O<sub>2</sub> &lt; 10<sup>−6</sup> PAL; present atmospheric level). When the P supply rate to the ocean exceeds a certain threshold, the GOE occurs and atmospheric <i>p</i>O<sub>2</sub> rises to ~10<sup>−3</sup>–10<sup>−1</sup> PAL. After the GOE, the marine Fe(II) concentration is highly sensitive to atmospheric <i>p</i>O<sub>2</sub>, suggesting that the marine redox landscape during the Proterozoic may have fluctuated between ferruginous conditions and anoxic non-ferruginous conditions with sulfidic water masses around continental margins. At a certain threshold value of atmospheric <i>p</i>O<sub>2</sub> of ~0.3% PAL, the primary oxidation pathway of Fe(II) shifts from the activity of Fe(II)-utilizing anoxygenic photoautotrophs in sunlit surface waters to abiotic process in the deep ocean. This is accompanied by a shift in the primary deposition site of Fe(III) hydroxides from the surface ocean to the deep sea, providing a plausible mechanistic explanation for the observed cessation of iron formations during the Proterozoic.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 6","pages":"689-707"},"PeriodicalIF":3.7,"publicationDate":"2023-08-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10309965","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
White and green rust chimneys accumulate RNA in a ferruginous chemical garden 白色和绿色的铁锈烟囱在含铁的化学花园中积累RNA
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-08-24 DOI: 10.1111/gbi.12572
Vanessa Helmbrecht, Maximilian Weingart, Frieder Klein, Dieter Braun, William D. Orsi
{"title":"White and green rust chimneys accumulate RNA in a ferruginous chemical garden","authors":"Vanessa Helmbrecht,&nbsp;Maximilian Weingart,&nbsp;Frieder Klein,&nbsp;Dieter Braun,&nbsp;William D. Orsi","doi":"10.1111/gbi.12572","DOIUrl":"10.1111/gbi.12572","url":null,"abstract":"<p>Mechanisms of nucleic acid accumulation were likely critical to life's emergence in the ferruginous oceans of the early Earth. How exactly prebiotic geological settings accumulated nucleic acids from dilute aqueous solutions, is poorly understood. As a possible solution to this concentration problem, we simulated the conditions of prebiotic low-temperature alkaline hydrothermal vents in co-precipitation experiments to investigate the potential of ferruginous chemical gardens to accumulate nucleic acids via sorption. The injection of an alkaline solution into an artificial ferruginous solution under anoxic conditions (O<sub>2</sub> &lt; 0.01% of present atmospheric levels) and at ambient temperatures, caused the precipitation of amakinite (“white rust”), which quickly converted to chloride-containing fougerite (“green rust”). RNA was only extractable from the ferruginous solution in the presence of a phosphate buffer, suggesting RNA in solution was bound to Fe<sup>2+</sup> ions. During chimney formation, this iron-bound RNA rapidly accumulated in the white and green rust chimney structure from the surrounding ferruginous solution at the fastest rates in the initial white rust phase and correspondingly slower rates in the following green rust phase. This represents a new mechanism for nucleic acid accumulation in the ferruginous oceans of the early Earth, in addition to wet-dry cycles and may have helped to concentrate RNA in a dilute prebiotic ocean.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 6","pages":"758-769"},"PeriodicalIF":3.7,"publicationDate":"2023-08-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/gbi.12572","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10062607","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Tocopherols and associated derivatives track the phytoplanktonic response to evolving pelagic redox conditions spanning Oceanic Anoxic Event 2 生育酚及其相关衍生物追踪浮游植物对海洋缺氧事件2中不断演变的远洋氧化还原条件的反应。
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-08-11 DOI: 10.1111/gbi.12570
Gregory T. Connock, Xiao-Lei Liu
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