{"title":"RAL6 encodes a seed allergenic protein that positively regulates grain weight and seed germination.","authors":"Xin Yan, Wei Zhou, Xirui Huang, Jiexiu Ouyang, Shaobo Li, Jiadong Gao, Xin Wang","doi":"10.1007/s10265-024-01581-w","DOIUrl":"10.1007/s10265-024-01581-w","url":null,"abstract":"<p><p>The rice albumin (RAG) gene family belongs to the Tryp_alpha_amyl family. RAG2, specifically expressed in 14-21 DAP (days after pollination) seeds, regulates grain yield and quality. In this study, we identified another RAG family gene, RAL6, which exhibits specific expression in developing seeds, particularly in 7, 10, and 15 DAP seeds. Employing the CRISPR/Cas9 system, we analyzed functions of RAL6 and found that the ral6 lines (ral6-1, ral6-2, ral6-3, and ral6-4) displayed thinner seeds with significantly decreased 1000-grain weight and grain thickness compared to ZH11. Additionally, the cell width of spikelet cells, total protein and glutelin contents were significantly reduced in ral6. The germination assay and 1% TTC staining revealed a significant decrease in seed vigor among the ral6 lines. The alpha-amylase activity in ral6 mutant seeds was also markedly lower than in ZH11 seeds after 2 days of imbibition. Furthermore, co-expression analysis and GO annotation showed that co-expressed genes were involved in immune response, oligopeptide transport, and the glucan biosynthetic process. Collectively, our findings suggest that RAL6 plays a coordinating role in regulating grain weight and seed germination in rice.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"1105-1114"},"PeriodicalIF":2.7,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142145880","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Shinsuke Shimizu, Koichi Hori, Kimitsune Ishizaki, Hiroyuki Ohta, Mie Shimojima
{"title":"SENSITIVE TO FREEZING2 is crucial for growth of Marchantia polymorpha under acidic conditions.","authors":"Shinsuke Shimizu, Koichi Hori, Kimitsune Ishizaki, Hiroyuki Ohta, Mie Shimojima","doi":"10.1007/s10265-024-01564-x","DOIUrl":"10.1007/s10265-024-01564-x","url":null,"abstract":"<p><p>Land plants have evolved many systems to adapt to a wide range of environmental stresses. In seed plants, oligogalactolipid synthesis is involved in tolerance to freezing and dehydration, but it has not been analyzed in non-vascular plants. Here we analyzed trigalactosyldiacylglycerol (TGDG) synthesis in Marchantia polymorpha. TGDG is synthesized by galactolipid: galactolipid galactosyltransferase [GGGT; SENSITIVE TO FREEZING2 (SFR2) in Arabidopsis]. We analyzed the subcellular localization and GGGT activity of two M. polymorpha SFR2 homologs (MpGGGT1 and MpGGGT2, each as a GFP-fusion protein) using a transient expression system in Nicotiana benthamiana leaves and found that MpGGGT1-GFP localized in the chloroplast envelope membrane. We produced mutants Mpgggt1 and Mpgggt2 and found that TGDG did not accumulate in Mpgggt1 upon treatment of the thallus with acetic acid. Moreover, growth of Mpgggt1 mutants was impaired by acetic acid treatment. Microscopy revealed that the acetic acid treatment of M. polymorpha plants damaged intracellular membranes. The fact that the effect was similar for wild-type and Mpgggt1 plants suggested that MpGGGT has a role in recovery from damage. These results indicate that MpGGGT plays a crucial role in M. polymorpha growth under conditions of acid stress, which may have been encountered during the ancient terrestrial colonization of plants.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"1115-1126"},"PeriodicalIF":2.7,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11525325/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141889568","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Intricate intracellular kinase network regulates the Spodoptera lituta-derived elicitor response signaling in Arabidopsis.","authors":"Yoshitake Desaki, Tasuku Kato, Keiichirou Nemoto, Akira Nozawa, Takuya Uemura, Naoya Ninomiya, Tatsuya Sawasaki, Gen-Ichiro Arimura","doi":"10.1007/s10265-024-01586-5","DOIUrl":"https://doi.org/10.1007/s10265-024-01586-5","url":null,"abstract":"<p><p>Plants defend themselves against herbivores by recognizing herbivore-derived elicitors and activating intracellular signaling. In Arabidopsis, the receptor-like kinase HAK1 recognizes the poly-saccharide elicitor (FrA) from Spodoptera litura larvae, leading to the expression of defense-related genes such as PDF1.2. During this process, the cytoplasmic kinase CRK2 phosphorylates PBL27, triggers the ERF13 expression via ethylene signaling and subsequently leads to PDF1.2 expression. Herein, we investigated four cytoplasmic kinases from the same receptor-like cytoplasmic kinase (RLCK) VII family as PBL27 that interacts with CRK2. Among them, PBL11, like PBL27, is phosphorylated by CRK2 and induces PDF1.2 expression but does not affect ERF13 expression. The weight gain of S. litura larvae on PBL11-deficient mutant plants was only slightly higher than that of wild-type plants, suggesting that PBL11 may function as a minor RLCK that supports the defense response.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-10-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142468338","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Female flowers with short ovaries in 'Lemon' cucumber (Cucumis sativus) plants and their progeny carrying the mm genotype (CS-ACS2 genes with c.97G > T mutations): a novel trimonoecious phenotype.","authors":"Seiji Yamasaki, Taimei Matsumoto, Yuina Tomota, Nanami Watanabe, Tatsuya Tanaka","doi":"10.1007/s10265-024-01583-8","DOIUrl":"https://doi.org/10.1007/s10265-024-01583-8","url":null,"abstract":"<p><p>Analysis of the sex expression in 10 'Lemon' (mmff) cucumber plants (Cucumis sativus L.), known to be andromonoecious, revealed that 3 plants produced female flowers with short ovaries, resembling bisexual flowers, after producing male and bisexual flowers. To investigate the heredity pattern governing these aberrant female flowers with short ovaries, F<sub>1</sub> hybrid plants (MmFf) were generated through a cross between 'Dokanari-sennari' (MMFF) and 'Lemon' (mmff), and #4 (mmff) and #45 (mmFF) were meticulously selected from a pool of 45 F<sub>2</sub> segregants. Analysis of the sex expression in both 10 F<sub>5</sub> plants (mmff) derived from the #4 (mmff) and 10 F<sub>4</sub> plants (mmFF) derived from the #45 (mmFF) revealed that 8-9 plants produced female flowers with short ovaries after producing male and bisexual flowers. Notably, no female flowers with short ovaries were produced in the plants carrying the M gene, such as 'Dokanari-sennari' (MMFF), 8 F<sub>1</sub> hybrid plants (MmFf), and the 29 F<sub>2</sub> segregants (M-F-,M-ff). Thus, female flowers with short ovaries may be produced in some 'Lemon' (mmff) cucumber plants and their progeny, particularly those carrying the mm genotype (CS-ACS2 genes with c.97G > T mutations), after the production of male and bisexual flowers. However, no clear genetic rules governing the occurrence of these female flowers with short ovaries were observed. This is the first report on trimonoecious cucumber plants displaying male flowers, bisexual flowers with short ovaries, and female flowers with short ovaries, all on the same plant, under the influence of the mm genotype (CS-ACS2 genes with c.97G > T mutations).</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142406531","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Identification and functional analysis of the Dof transcription factor genes in sugar beet.","authors":"Yaqing Sun, Yongfeng Zhang, Caiyuan Jian, Tong Wang, Guoli Cao, Ningning Li, Guolong Li, Shaoying Zhang","doi":"10.1007/s10265-024-01588-3","DOIUrl":"10.1007/s10265-024-01588-3","url":null,"abstract":"<p><p>In this study, members of the BvDof transcription factor family were identified in the beet genome data (Beta vulgaris L.) Through systematic analysis, 22 BvDof family genes were found in the beet genome, and they were divided into nine groups by phylogenetic analysis. Fifteen members of the BvERF family were involved in the transition to rapid root tuber growth. There was a tandem replication during the generation of the Dof gene family in sugar beet. Bv1_zfms, Bv_ofna, Bv5_racn, and Bv6_augo may be involved in the regulation of secondary cambium development in the beet root tuber. Bv9_nood, Bv1_zfms, and Bv6_cdca may be related to the growth rate of root tubers. The results provide a reference for further elucidating the molecular mechanism of the BvDof transcription factor, which regulates the development of beet root tubers.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142400561","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Marina Daniela Judkevich, Paula Alayón Luaces, Ana M. Gonzalez
{"title":"How pollen and ovule development underlay dioecy in Chloroluma gonocarpa (Sapotaceae)","authors":"Marina Daniela Judkevich, Paula Alayón Luaces, Ana M. Gonzalez","doi":"10.1007/s10265-024-01579-4","DOIUrl":"https://doi.org/10.1007/s10265-024-01579-4","url":null,"abstract":"<p>Previous studies have determined that <i>Chloroluma gonocarpa</i> (Sapotaceae), is a species that has cryptic dioecy. This type of sexual system is characterized by flowers that are morphologically perfect (both sexual whorls are present) but functionally pistillate or staminate (in each type of flower one of the sexual whorls is non-functional). In <i>C. gonocarpa</i> the pistillate flowers present well-developed stigma, functional ovules, and staminodes, while the staminate flowers present a poorly developed stigma, collapsed ovules, and pollen-producing anthers. In angiosperms, the abortion of sexual organs can occur at different stages of development (from pre-meiosis to post-meiosis), that is why we conducted an anatomical analysis of both flower types at various developmental stages. Using light microscopy, we described the processes of sporogenesis and gametogenesis to establish when the staminate flowers lose their pistillate function. To achieve this, we collected, fixed, and processed the flowers following conventional anatomical techniques for observation under a light microscope. Our findings reveal that pollen development occurs only in staminate flowers, while ovule development begins in both types of flowers but ceases in staminate flowers due to post-meiosis abortion. In contrast, normal development continues in pistillate flowers. These results suggest that dioecy in <i>C. gonocarpa</i> may have arisen from a gynodioecious pathway.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":"10 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142247824","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Rafael Becker, Renan Pittella, Fernando H Calderon-Quispe, Júlia de Moraes Brandalise, Rosana Farias-Singer, Rodrigo Bustos Singer
{"title":"Correction: Reproductive biology as a tool to elucidate taxonomic delimitation: How different can two highly specialized subspecies of Parodia haselbergii (Cactaceae) be?","authors":"Rafael Becker, Renan Pittella, Fernando H Calderon-Quispe, Júlia de Moraes Brandalise, Rosana Farias-Singer, Rodrigo Bustos Singer","doi":"10.1007/s10265-024-01563-y","DOIUrl":"10.1007/s10265-024-01563-y","url":null,"abstract":"","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"877"},"PeriodicalIF":2.7,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141788379","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Study on the variation characteristics and influencing factors of stem water content of Acer truncatum during the overwintering period.","authors":"Zehai Xu, Yandong Zhao","doi":"10.1007/s10265-024-01561-0","DOIUrl":"10.1007/s10265-024-01561-0","url":null,"abstract":"<p><p>Stem water content serves as a pivotal parameter that reflects the plant vitality and maintains their internal water balance. Given the insufficient comprehension regarding the stem water content characteristics and its influencing factors during different stages of the overwintering period, the study focused on Acer truncatum Bunge and developed an Internet of Things (IoT)-based ecological information monitoring system. The system incorporated a proprietary stem water content sensor, allowing non-invasive, in-situ and real time acquisition of stem water content while monitoring diverse environmental parameters. We conducted a detailed elucidation of stem water content variation characteristics and their responses to diverse environmental factors. The results showed: (1) During the overwintering period, stem water content exhibited diurnal variations characterized by \" daytime ascent and nighttime descent\" across the three stages, exhibiting differences in the moment when the stem water content reaches extremal values and daily fluctuations ranges. Stem water content exhibited minimal fluctuations during deciduous and bud-breaking stages but experienced significant freezing-thawing alternations during the dormant stage, leading to an increased daily fluctuation range. (2) The Pearson correlation coefficients between environmental parameters and stem water content varied dynamically across stages. Path analysis revealed that during the deciduous stage, stem temperature and saturation vapor pressure deficit were dominant factors influencing stem water content; during dormant stage, air temperature and saturation vapor pressure deficit directly impacted stem water content; during the bud-breaking stage, the primary parameters affecting stem water content were saturation vapor pressure deficit and stem temperature. The study provides valuable insights into unveiling the water transport patterns within tree stems tissue and their environmental adaptation mechanisms during the overwintering period, aiding in the scientific development of winter management strategies to protect trees from severe cold and freezing damage, while fostering healthy growth in the subsequent year.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"893-906"},"PeriodicalIF":2.7,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141558990","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pakkapol Thaowetsuwan, Ricarda Riina, Louis P Ronse De Craene
{"title":"Floral morphology and development reveal extreme diversification in some species of Croton (Euphorbiaceae).","authors":"Pakkapol Thaowetsuwan, Ricarda Riina, Louis P Ronse De Craene","doi":"10.1007/s10265-024-01572-x","DOIUrl":"10.1007/s10265-024-01572-x","url":null,"abstract":"<p><p>Floral diversity of Croton, the second largest genus in Euphorbiaceae, is currently under-explored. Several clades demonstrate an unusual floral morphology, e.g., lower or higher stamen number, bilateral symmetry and reduced ovary, but have never been investigated in a comparative study with typical Croton. This study examined morphology and ontogeny of flowers in nine Croton species from different clades within the genus with light and scanning microscopy, resin sectioning and micro-computed tomography. In staminate flowers, great variations of stamen number and arrangement are observed. The ancestral androecium likely consisted of two or more whorls with the outermost antepetalous stamen whorl developing centrifugally. Modification by reduction of the antepetalous whorl resulted in an outer alternipetalous stamen whorl in Croton section Moacroton, subgenus Quadrilobi. Several species in the subgenus Geiseleria show an independent reduction of stamen numbers by absence of a centrifugal development with the antepetalous whorl the first whorl to develop. Petal losses are observed in the distantly related C. setiger and C. dioicus. Chaotic stamen arrangement is found in C. celtidifolius (subgenus Adenophylli) as a result of a secondary stamen increase. In pistillate flowers, reduction of carpel numbers happened three times in the subgenus Geiseleria. C. monanthogynus has a bicarpellate ovary, while in C. setiger and C. michauxii the ovary is monocarpellate. Reduction of carpel number is linked with merism change and perianth reduction. The ovary in C. michauxii has basal placentation which is unique among all Croton. Moreover, strong bilateral sepals and nectaries are observed in species from section Julocroton. Therefore, the floral diversity of some species in the genus Croton could be explained by developmental modification of an ancestral form via reduction, rearrangement of stamen whorls, and symmetry shifts.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"721-743"},"PeriodicalIF":2.7,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142108610","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Regulation of heterochromatin organization in plants.","authors":"Noriko Inada","doi":"10.1007/s10265-024-01550-3","DOIUrl":"10.1007/s10265-024-01550-3","url":null,"abstract":"<p><p>Heterochromatin is a nuclear area that contains highly condensed and transcriptionally inactive chromatin. Alterations in the organization of heterochromatin are correlated with changes in gene expression and genome stability, which affect various aspects of plant life. Thus, studies of the molecular mechanisms that regulate heterochromatin organization are important for understanding the regulation of plant physiology. Microscopically, heterochromatin can be characterized as chromocenters that are intensely stained with DNA-binding fluorescent dyes. Arabidopsis thaliana exhibits distinctive chromocenters in interphase nuclei, and genetic studies combined with cytological analyses have identified a number of factors that are involved in heterochromatin assembly and organization. In this review, I will summarize the factors involved in the regulation of heterochromatin organization in plants.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"685-693"},"PeriodicalIF":2.7,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141446423","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}